mRNA_L-elsbetiae_contig586.14324.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig586.14324.1 vs. uniprot
Match: D8LBT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT6_ECTSI) HSP 1 Score: 239 bits (611), Expect = 4.000e-64 Identity = 191/392 (48.72%), Postives = 223/392 (56.89%), Query Frame = 3 Query: 312 SNDSLHRTKQRLETLGGVEREKRRLEELLQKDRASQTALREDAAAAREKLSIAVTEREELLRGLQQAKVFNDELAKGKEKAEEREREACARCVDVREGKLALQRALLEQLSASRAEVREERERCQHAEATLARLAGAAAARSRSRALLPSGNDVSGGE---------DGCSSSEDSGDGDTSSDPSSLP----EPFRPRDTLVQDYLGKEGAEQFLSDWDEERSSXXXXXXXXXXXPRPLLSHPSVSSLGGGRAV---LGGSSEAQ-------HPPQN--------------ELGASIDXXXXXXTSPAN---GRRHDRGAPERGRELQPPAAGSTAKI--------RLGDPGLERWASSMMELGKAAAVQIGTAADGEKVAHAAALLGDGP 1343 S +SL+R +QRLE L GV RE RRLE LLQ++ A Q ALRED AA+E+L +AV ER EL+RGL+QAKVFNDELAKGKEKAEERER ACA+C+D +EGKLALQRALLEQLSASRAE+REE++RCQ AEATL RLA +AA RSR+R L P +D E DG S++ G T + S+ EP RPRDTLVQDYLG+EGAEQFLSDWDEERSS PL + S GG R+ G +E PP L S SP + G GAPERG E P A +TA RL DP L+ W SM+ LGK A G A + V GDGP Sbjct: 331 SKESLYRAQQRLEELEGVTRENRRLEALLQEEAALQAALREDVNAAKEELRVAVAERGELMRGLRQAKVFNDELAKGKEKAEERERAACAQCIDTKEGKLALQRALLEQLSASRAELREEQKRCQKAEATLGRLADSAAKRSRNRGLPPLEDDGESDEGASVSFEESDGVSANRSIGASGTPTTASAAVTSSFEPPRPRDTLVQDYLGREGAEQFLSDWDEERSSASSLSFSSLPLQSPLST--GGRSHGGSRSASFATGRPTEVSLRAQPWTPPPXXXXXXXXXXXXEELPSLAGSSGQIPWASDSPGHTTKGSAPCPGAPERGEE--PSTAAATAXXXXXXXXARRLRDPDLKEWTMSMVALGKVARAGAGRTAS-DVVVPPQKGFGDGP 717 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig586.14324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig586.14324.1 >prot_L-elsbetiae_contig586.14324.1 ID=prot_L-elsbetiae_contig586.14324.1|Name=mRNA_L-elsbetiae_contig586.14324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=600bp MGARAESLRIELHACAAALSTAKQRGERVSAQLRASNDSLHRTKQRLETLback to top mRNA from alignment at L-elsbetiae_contig586:23668..29734+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig586.14324.1 ID=mRNA_L-elsbetiae_contig586.14324.1|Name=mRNA_L-elsbetiae_contig586.14324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6067bp|location=Sequence derived from alignment at L-elsbetiae_contig586:23668..29734+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig586:23668..29734+ >mRNA_L-elsbetiae_contig586.14324.1 ID=mRNA_L-elsbetiae_contig586.14324.1|Name=mRNA_L-elsbetiae_contig586.14324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3600bp|location=Sequence derived from alignment at L-elsbetiae_contig586:23668..29734+ (Laminarionema elsbetiae ELsaHSoW15)back to top |