mRNA_L-elsbetiae_contig5858.14318.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Match: A0A6H5J7G6_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7G6_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.230e-43 Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 1 Query: 1 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLAAALVCLAALVLSYDLPDTID 255 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDT LPGCPYL AA+VCLAAL+LSY++PD ID Sbjct: 352 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTLLPGCPYLIAAVVCLAALLLSYEIPDAID 436
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Match: A0A836CJ60_9STRA (Hippocampus abundant transcript 1 protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ60_9STRA) HSP 1 Score: 106 bits (264), Expect = 4.340e-25 Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 1 Query: 1 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLAAALVCLAALVLSYDLPDTID 255 SLLSNLVYP++SSL+SRSV+T+ QGEVLG INGVRALTEGFGPL+F L E T LPG PYL A V + ALV S+ +PD D Sbjct: 348 SLLSNLVYPAMSSLVSRSVSTAAQGEVLGTINGVRALTEGFGPLIFGALMSQFEGTLLPGAPYLIAGGVSVGALVYSFGIPDETD 432
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Match: A0A4D9D9X9_9STRA (MFS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9X9_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 8.660e-22 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 1 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLAAALVCLAALVLSYDLPD 246 S L+NLVYP++SSL+SRSV SKQGE LGA+NG+RALTEGFGPLLF L + +DT PG PYL A+ +AAL+ + LP Sbjct: 378 STLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLPS 459
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Match: A0A6V3A0Z0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3A0Z0_HETAK) HSP 1 Score: 96.7 bits (239), Expect = 1.220e-21 Identity = 51/85 (60.00%), Postives = 60/85 (70.59%), Query Frame = 1 Query: 1 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLAAALVCLAALVLSYDLPDTID 255 S+ SNLVYPS+SSL+SR V +QGE LGA+NGV+ALTEGFGPLLF L E T +PG PYL AA ALV S+ LP+ D Sbjct: 339 SVFSNLVYPSLSSLVSRGVGAGRQGEALGALNGVKALTEGFGPLLFGHLLAAFEGTVVPGAPYLVAAAFAAGALVTSFALPEDPD 423
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Match: A0A7S2XVJ1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ1_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.340e-21 Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 1 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLAAALVCLAALVLSYDLPD 246 S+LSNLVYP++SS++SR V ++ G LGA+NGV+ALTEGFGPL F L + EDT LPG PYL AA+ + AL+ SY L + Sbjct: 141 SVLSNLVYPALSSMVSRGVGPNQVGVALGAMNGVKALTEGFGPLCFGALLFQFEDTRLPGAPYLIAAMFAIGALLASYSLKE 222
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Match: A0A7S2SCZ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCZ5_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 8.870e-21 Identity = 45/82 (54.88%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 1 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLAAALVCLAALVLSYDLPD 246 SL SNLVYPS+ SL+SR+V KQG G+INGV+ALTEGFGPL F L EDT LPG PYL + L A+ +++ +P Sbjct: 15 SLFSNLVYPSLCSLVSRNVPADKQGAAQGSINGVKALTEGFGPLAFGLLMNVFEDTALPGAPYLIGGFITLLAVAVTFRIPS 96
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Match: A0A836CPP9_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPP9_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.000e-19 Identity = 48/72 (66.67%), Postives = 56/72 (77.78%), Query Frame = 1 Query: 7 LSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLAAALVCLAAL 222 LSNL YPS+SSL+S+SV+ QGEVLG INGVRALTEGFGPL+F L Y E + LPG PYL A+ V +AAL Sbjct: 413 LSNLFYPSMSSLVSKSVSLEAQGEVLGTINGVRALTEGFGPLVFGALMSYFETSALPGAPYLIASAVGVAAL 484
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Match: A0A6U3VK78_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VK78_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 5.830e-19 Identity = 46/85 (54.12%), Postives = 58/85 (68.24%), Query Frame = 1 Query: 1 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLAAALVCLAALVLSYDLPDTID 255 S LS+LVYPS++SL+S +V K GE LGA+NG+++LTEGFGPL F L +E++ LPG PYL AALV A S LP D Sbjct: 38 STLSHLVYPSLASLVSTTVPPEKVGEALGAVNGIKSLTEGFGPLCFGVLMTLSEESVLPGWPYLLAALVAYGAYKRSLLLPTEDD 122
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Match: A0A1Z5JPM2_FISSO (MFS domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPM2_FISSO) HSP 1 Score: 87.0 bits (214), Expect = 4.030e-18 Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 1 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLAAALVCLAALVLSYDLPD 246 SLL NLVYPS+SSL+S SV GE LGAING++ALTEG GPL+F L +E + LPG PYL A+L+ AA ++ +LPD Sbjct: 400 SLLGNLVYPSLSSLVSGSVEPDAVGEALGAINGIKALTEGIGPLVFGSLMTLSEASPLPGWPYLLASLLVFAAYRVADELPD 481
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Match: A0A8J2S4T1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4T1_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.420e-17 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 1 SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLAAALVCLAALVLSYDLPD 246 SL+SNLVYP++S+L++R ++ GE LGA+NGV+ALTEG GPL F + E T LPG PYLA A + L A LS+ LPD Sbjct: 314 SLVSNLVYPALSALVARRAEATEVGEALGALNGVKALTEGVGPLGFGLVMVEFERTALPGLPYLACAALALLAWALSHRLPD 395 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5858.14318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5858.14318.1 >prot_L-elsbetiae_contig5858.14318.1 ID=prot_L-elsbetiae_contig5858.14318.1|Name=mRNA_L-elsbetiae_contig5858.14318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp SLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFback to top mRNA from alignment at L-elsbetiae_contig5858:113..367+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5858.14318.1 ID=mRNA_L-elsbetiae_contig5858.14318.1|Name=mRNA_L-elsbetiae_contig5858.14318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=255bp|location=Sequence derived from alignment at L-elsbetiae_contig5858:113..367+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5858:113..367+ >mRNA_L-elsbetiae_contig5858.14318.1 ID=mRNA_L-elsbetiae_contig5858.14318.1|Name=mRNA_L-elsbetiae_contig5858.14318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=510bp|location=Sequence derived from alignment at L-elsbetiae_contig5858:113..367+ (Laminarionema elsbetiae ELsaHSoW15)back to top |