mRNA_L-elsbetiae_contig5856.14317.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 167 bits (422), Expect = 8.100e-47 Identity = 84/152 (55.26%), Postives = 102/152 (67.11%), Query Frame = 1 Query: 1 SSGQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTIRSLWIPPKSNTRPNEDSSKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWGWSKCVRLMGVVSACSLRSVTWPTGIEELVLDADLDVSVE 456 + G +R DAF +AL Q CEGG+KRWY ST ELQL SL+ C+ACRS TL V V T SLW PP PN SSK VR+ SRVP VRALRLTWA M+ LVQ AA+ELW S+ + ++G + A SL SV WP G+ +LVLD D + +E Sbjct: 3 TEGYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSK-VRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPME 153
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 171 bits (434), Expect = 4.290e-44 Identity = 86/149 (57.72%), Postives = 109/149 (73.15%), Query Frame = 1 Query: 10 QSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTIRSLWIPPKSNTRPNEDSSKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWGWSKCVRLMGVVSACSLRS-VTWPTGIEELVLDADLDVSV 453 ++RCLDAF++AL Q CEGG+KRWYASTLELQL SL+ C+ACR+ S L V VDD+T RSLW + TRPN S + ISSRVP VRALRLTWAL M+ L++ AA+ELW WS+ + L+G SL S V WP G+ +LVL D D+++ Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNT-RSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAM 155
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 149 bits (376), Expect = 9.680e-36 Identity = 78/150 (52.00%), Postives = 99/150 (66.00%), Query Frame = 1 Query: 1 SSGQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTIRSLWIPPKSNTRPNEDSSKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWGWSKCVRLMGVVSACSLRSVTWPTGIEELVLDADLDVS 450 + G S+CLDAF+VAL Q C+G +KRWY STLELQL SLE C ACR + TL V V +T SLW P +++T N + S KV ISSRVP V+A LTWALPM VL Q +A E+ S C R SA SL S WP ++ +V ++D+ V+ Sbjct: 3 TKGNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTN-NRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVN 151
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 144 bits (364), Expect = 1.030e-35 Identity = 81/149 (54.36%), Postives = 102/149 (68.46%), Query Frame = 1 Query: 7 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTIRSLWIPPKSNTRPNEDSSKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWGWSKCVRLMGVVSACSLRSVTW-PTGIEELVLDADLDVS 450 G+S CL AFIVAL Q C G +KRWYASTLELQL SLEFC ACR + TL V VD +T RSLW P KS+ + S++ +S+RVPAV+A LTWAL M+VL+Q++AVEL SK R+ G S SL S+ W ++ LV D+D+ S Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHAT-TKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPAS 160
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 128 bits (322), Expect = 1.820e-29 Identity = 70/144 (48.61%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 1 SSGQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTIRSLWIPPKSNTRPNEDSSKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWGWSKCVRLMGVVSACSLRSVTWPTGIEELVLD 432 S Q RCLDAF+VAL Q EGG+KRWY STL+LQLASLEFC ACRS L V VD T +LW ++N S+RVPAV+A+ LTWA P + + SA+ ELW + ++L + +L SV WP G++ LV+D Sbjct: 3 SEAQRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAGT--------STRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMD 138
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 129 bits (323), Expect = 3.730e-29 Identity = 75/178 (42.13%), Postives = 96/178 (53.93%), Query Frame = 1 Query: 1 SSGQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTIRSLWIPPKSNTRPNEDSSK---------------------------KVRISSRVPAVRALRLTWALPMDVLVQSAAVELWGWSKCVRLMGVVSACSLRSVTWPTGIEELVLDADLDVSV 453 S G SR DA I+A+ Q EG KRWY STLEL+LASLE C+ACR + T+ V VD T SLW P TR + SSK K RISSRVP +AL LTWALP ++L+Q AVELW + ++L +S L SV WP ++ L L+ + ++ Sbjct: 3 SEGASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAI 180
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 115 bits (289), Expect = 2.000e-26 Identity = 69/142 (48.59%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 1 SSGQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTIRSLWIPPKSNTRPNEDSSKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWGWSKCVRLMGVVSACSLRSVTWPTGIEELV 426 + G LD IVAL Q C+G +KRWY STLELQL SLE C ACRS L V V + T +LW S T P++ S +V S+RVPAV+AL TWALPMD L Q AA E ++ G A S+ SV WP ++ LV Sbjct: 83 TEGGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQ-RSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLV 223
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 113 bits (283), Expect = 5.430e-25 Identity = 69/148 (46.62%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 4 SGQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTIRSLWIPPKSNTRPNEDSSKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWGWSKCVRLMGVVSACSLRSVTWPTGIEELVLDADLDV 447 +G+ C+DAFIVAL + C+GG++RWYASTLELQ SLEFC ACR + T S T+ L V SR P VRA LTWAL MDVL+QS A+EL SK R G SA +L S+ W ++ LVL+ D V Sbjct: 14 NGRGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPT---SHSTSTVGRL-----------------VSGVSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVLELDTPV 141
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.770e-24 Identity = 73/160 (45.62%), Postives = 91/160 (56.88%), Query Frame = 1 Query: 7 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTIRSLWIPPKSNTRPNEDSSKKVRISSRVPAVRALRLTWALPMDVLVQSAAVEL--------------------WGW-SKCVRLMGVVSACSLRSVTWPTGIEEL 423 G+S CLDAFIVAL Q +G KRWY STLELQL SLEFC ACRS + V + +T SLW P KS+ + S++ I SRVPAV+A WALPM++L+ +A EL GW K RLM S S+ SV+WP ++EL Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKK-RSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLM-FYSERSVNSVSWPACLQEL 182
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 103 bits (257), Expect = 1.910e-23 Identity = 54/87 (62.07%), Postives = 63/87 (72.41%), Query Frame = 1 Query: 7 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTIRSLWIPPKSNTRPNEDSSKKVRISSRVPAV 267 G ++C DAF+VAL Q CEGG KR Y STLEL LASL+ C+A RS STL V V +T RS W PPK RP+E SSK +R+SSRVP V Sbjct: 18 GPTQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEGSSK-IRLSSRVPVV 103 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5856.14317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5856.14317.1 >prot_L-elsbetiae_contig5856.14317.1 ID=prot_L-elsbetiae_contig5856.14317.1|Name=mRNA_L-elsbetiae_contig5856.14317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp MSPLKQWCGLPLWSVWCLGLTSTDQLSKLCGQPSSGSCHLVIHSTSPSPEback to top mRNA from alignment at L-elsbetiae_contig5856:7951..9168+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5856.14317.1 ID=mRNA_L-elsbetiae_contig5856.14317.1|Name=mRNA_L-elsbetiae_contig5856.14317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1218bp|location=Sequence derived from alignment at L-elsbetiae_contig5856:7951..9168+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5856:7951..9168+ >mRNA_L-elsbetiae_contig5856.14317.1 ID=mRNA_L-elsbetiae_contig5856.14317.1|Name=mRNA_L-elsbetiae_contig5856.14317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1266bp|location=Sequence derived from alignment at L-elsbetiae_contig5856:7951..9168+ (Laminarionema elsbetiae ELsaHSoW15)back to top |