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Homology
BLAST of mRNA_L-elsbetiae_contig5845.14300.1 vs. uniprot
Match: D7FHX7_ECTSI (FHA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX7_ECTSI) HSP 1 Score: 182 bits (462), Expect = 4.310e-52 Identity = 116/241 (48.13%), Postives = 133/241 (55.19%), Query Frame = 1
Query: 31 AVISWVPAQRAYQITCMSKNGMVVAGSYHAKGGKEKLESRAPIKLGPASMYFLLPETEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPMANLFTFADMVSGAFRSQELSA-AAAAGGLSSEDLQNWIMQAHPEWGLEGTRMKALALGIEEALNKNFVSIGQDRWTTAPPLESAKRAKLSSPTNEASVVAA 750
AVI+WVP+Q++YQI CMSKNGMVVAGSYHAKGG EKLESRAPIKLGPASMYFLLPE EA A+P +F DM+S AFRS+ELSA AAA+GGLSS D+QNWIMQA+PEW EG RMKALA+GIEEALN++FVS G DRW S KR KL++ T +V AA
Sbjct: 67 AVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREA---------------QKPAPAPATAVAAPRVTPPPAASAPQAKPLESRPAPPSSQGLPPENSAPAAVVAPSATTVAAAAPAPAPVSFGDMISQAFRSRELSAVAAASGGLSSGDVQNWIMQAYPEWNKEGPRMKALAVGIEEALNESFVSRGGDRWAED---SSVKRVKLNNGTPTPAVAAA 289
BLAST of mRNA_L-elsbetiae_contig5845.14300.1 vs. uniprot
Match: A0A6H5JLB0_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB0_9PHAE) HSP 1 Score: 164 bits (415), Expect = 1.020e-45 Identity = 111/211 (52.61%), Postives = 124/211 (58.77%), Query Frame = 1
Query: 31 AVISWVPAQRAYQITCMSKNGMVVAGSYHAKGGKEKLESRAPIKLGPASMYFLLPETEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPMANLFTFADMVSGAFRSQELSA-AAAAGGLSSEDLQNWIMQAHPEWGLEGTRMKALALGIEEALNKNFVSIG 660
AVI+WVP+Q++YQI CMSKNGMVVAGSYHAKGG EKLESRAPIKLGPASMYFLLPE EA XXXXXX XX +P +F DMV AFRS+ELSA AAA+GGLSS D+QNWIMQA+PEW EG RMKALA+GIEEALN++FVS G
Sbjct: 67 AVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREA------QKPAXXXXXXAAAPRVTPPPAASTPQGKPLDSRPAPPSSQGLPPENSVTTAVVAPSATTVAAXXAVANPAVPAPAPATVSFGDMVCQAFRSRELSAVAAASGGLSSGDVQNWIMQAYPEWNKEGPRMKALAVGIEEALNESFVSRG 271
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 185.3 |
Seed ortholog evalue | 4e-44 |
Seed eggNOG ortholog | 2880.D7FHX7 |
Preferred name | FOXK1 |
KEGG ko | ko:K09404 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000981,GO:0002252,GO:0002376,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0006950,GO:0006952,GO:0007154,GO:0007267,GO:0007275,GO:0007494,GO:0007495,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009889,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0030154,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0035295,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048518,GO:0048565,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051607,GO:0051704,GO:0051707,GO:0055123,GO:0060255,GO:0065007,GO:0080090,GO:0098542,GO:0098586,GO:0140110,GO:1903506,GO:2000112,GO:2001141 |
EggNOG free text desc. | sequence-specific DNA binding |
EggNOG OGs | COG5025@1,KOG2294@2759 |
COG Functional cat. | K |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko03000 |
Ec32 ortholog description | Forkhead-associated (FHA) domain |
Ec32 ortholog | Ec-12_006270.1 |
Exons | 5 |
Model size | 840 |
Cds size | 840 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816630.4208834-CDS-L-elsbetiae_contig5845:7608..7784 | 1622816630.4208834-CDS-L-elsbetiae_contig5845:7608..7784 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5845 7609..7784 - |
1691683697.7804568-CDS-L-elsbetiae_contig5845:7608..7784 | 1691683697.7804568-CDS-L-elsbetiae_contig5845:7608..7784 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5845 7609..7784 - |
1622816630.4316382-CDS-L-elsbetiae_contig5845:8416..8511 | 1622816630.4316382-CDS-L-elsbetiae_contig5845:8416..8511 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5845 8417..8511 - |
1691683697.7963474-CDS-L-elsbetiae_contig5845:8416..8511 | 1691683697.7963474-CDS-L-elsbetiae_contig5845:8416..8511 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5845 8417..8511 - |
1622816630.4415958-CDS-L-elsbetiae_contig5845:9460..9789 | 1622816630.4415958-CDS-L-elsbetiae_contig5845:9460..9789 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5845 9461..9789 - |
1691683697.8070052-CDS-L-elsbetiae_contig5845:9460..9789 | 1691683697.8070052-CDS-L-elsbetiae_contig5845:9460..9789 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5845 9461..9789 - |
1622816630.4517813-CDS-L-elsbetiae_contig5845:10298..10405 | 1622816630.4517813-CDS-L-elsbetiae_contig5845:10298..10405 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5845 10299..10405 - |
1691683697.8167033-CDS-L-elsbetiae_contig5845:10298..10405 | 1691683697.8167033-CDS-L-elsbetiae_contig5845:10298..10405 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5845 10299..10405 - |
1622816630.463758-CDS-L-elsbetiae_contig5845:11579..11712 | 1622816630.463758-CDS-L-elsbetiae_contig5845:11579..11712 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5845 11580..11712 - |
1691683697.8260474-CDS-L-elsbetiae_contig5845:11579..11712 | 1691683697.8260474-CDS-L-elsbetiae_contig5845:11579..11712 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5845 11580..11712 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5845.14300.1 >prot_L-elsbetiae_contig5845.14300.1 ID=prot_L-elsbetiae_contig5845.14300.1|Name=mRNA_L-elsbetiae_contig5845.14300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp
MACLLPDSTTAVISWVPAQRAYQITCMSKNGMVVAGSYHAKGGKEKLESR APIKLGPASMYFLLPETEAPAPAPAPAPAQALPLQRSQAPPPSQASPRPP PAENGTLAVPSSTPTPQPRTAAAANPPAAAAAAAAAAAASASAVASASPM ANLFTFADMVSGAFRSQELSAAAAAGGLSSEDLQNWIMQAHPEWGLEGTR MKALALGIEEALNKNFVSIGQDRWTTAPPLESAKRAKLSSPTNEASVVAA AAAAAAAAATARLPPVPAGVAPMPAPAPAA back to topmRNA from alignment at L-elsbetiae_contig5845:7609..11712- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5845.14300.1 ID=mRNA_L-elsbetiae_contig5845.14300.1|Name=mRNA_L-elsbetiae_contig5845.14300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4104bp|location=Sequence derived from alignment at L-elsbetiae_contig5845:7609..11712- (Laminarionema elsbetiae ELsaHSoW15) ATGGCATGTTTATTGCCGGATTCAACAACAGCTGTCATCAGCTGGGTCCC
CGCCCAACGGGCGTACCAGATCACGTGCATGAGCAAGAACGGGATGGTGG
TTGCGGGGAGCTACCACGCAAAGGGCGGCAAAGGTGAGAGTGGAGAGAGA
GAGAGAGAGAGAGAAGAGAAGGTGGGAGGAAAGCACTCCGTTTCGCATAT
TTCAGTACCGTAGCTTTCATCGGCCACAAGACATCTACCCTGTCTCCCAT
ACCCCAGTCTCGGCTAAAGCATACACTTTTACTCCTATACTTGCCACCAA
AGGATGAGTAATTCGGTTGCTGCTCTTGCTCTTGCTCACCCCCCCCCCGA
AAAAGTTGGTGCCGTATACGGTGTGGTATATCGTTTAAATAGCAATGTAC
TTCGTATGTACGTTTTTGCTCACGACCTACCGCCAAACAACATCGAGCGC
GCAAGACACTACCAGGACCTGGACTTTCCTACTAGCTGTCTGTGTATTCA
CCATTATCCTCAGTGCGACTTTCCTGGTATAGATGGACGATTGCTAACTA
GATACCAGCCAAAAAACATTTTTTTCCGGACTGGGGTGCTTGAGCAAAGC
CCGAAAAGGGGGTATGTGGACTGGGATCCAGAACGTTAGACAGGGATAGA
AGATATTCGGAGTTTGTGGATGCTATCGGTGTGTTACCCAAAATCGCAAC
TGGCGACGACGTGGTGTGTGTTGGTGATGGGGTATGCCCAGTGTGTGGCA
TCTTTTGAGATTTGGCCGTTCAAGAATGTTGGTGGTGGGGCATGTATGCC
CAGTATGTAGCATTTTTTTAGATTTGGCCGTTCAAGGACGATGCTGACTG
GCGTGCCCGGTAGCTGGCGCTGTTCATGTGAAACACATGATACATGTGAA
ACAGCAAGAAACTTCTGTGTCTCTTCTACCGTATACCAAGAACGGTCCCA
CGCACGACGCACGTGTCGAGGAAAGCAGCATTTTGTGTCCCTTCCGCGCG
CGCTTACCTCCATGAAGTGCCAGCCCAGCCCAACCCAACCCAACCTCACA
CACCGACACAAACAATATACCCGCCGCTCACCGCGTAGTGCGGCTCGCGA
GGCACGGAGAGCCACACACCAATCGCCGGCCGAATCGATGCGACACGTTT
CCGTACATGTAGATCATGCAGGGACAGGCAGCGCCTTTTCTGCCGCTGTT
GGCGCTAATACCTACGACTCGCAAACTAAACCCGGGCCAACCAAATACCC
CCACGTCGTCTTATATGATCTCCCCCGGCGAAACCGACTTCCAAACAACT
CTTTCAGAGAAACTCGAGTCGCGAGCCCCGATCAAGCTCGGGCCGGCGTC
GATGTACTTTCTGTTGCCAGAGACGGAAGCGCCGGCACCGGCACCGGCTC
CCGCCCCGGCACAGGTGAGCTCTTTTTTTTTGTTTTGTCGGGCGCTATGT
ACATGTTGTTGTTGCTGCTGATGCTCTGCTGGTGCGCTGCTGTTGTCGTT
GGTGGTCGGGTTAGTTCTTCCCTACATAAAAGGTTAACCCGTGATGAACA
AAGTGAGGCCGGGAAGACAAGTTAGCAGTAGTCTTTCGCAAGGTCTCAAG
AGTTCATATGCACGAACGAAAAACAGTGCCTGTTAGGGCAGAGGTGCTGT
TGCATAGACGGGGTCAGGTTTCAAGTGTGTCGAAAACAAGCAAGCAATCT
TATTACTCTTAATAATTCCCCCCCAAGACCAGCAGGTGTGTGCGCCCGCC
CGTGCATGCGTTGTGTGTGGTTTACTGTAACTGCTTAACTGCTGTTGTTG
TTGTTGCTGCTGCTGCTGCTGCTGCCTTGATTTATGTTTTATTGGGTTTT
CCTCTCAAACGTGCCGTGCGGGCTGTTCTTGGCACCCTCGTGGCTGTCTC
CCACTATCTCTTTGGGCGCGCAGGCGCTGCCCCTCCAGAGATCGCAAGCT
CCGCCGCCGTCGCAAGCGTCACCGCGACCGCCGCCGGCGGAGAACGGCAC
CCTGGCGGTACCGTCATCGACGCCCACACCACAACCGAGGACGGCGGCGG
CTGCGAATCCACCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
TCAGCATCAGCGGTGGCGAGCGCCTCTCCCATGGCGAACTTGTTTACCTT
CGCCGATATGGTCTCGGGAGCTTTCAGGAGCCAGGAGCTGTCGGCGGCCG
CTGCCGCAGGAGGACTCTCCAGCGAGGACTTGCAGAACTGGATCATGCAA
GCGTGAGTTGAGGACTGACAGGCAGAGAGGGGGGAGCGAGCGTGCCCGTT
TCCGTGGTGGTGGTCGTAGACTCTAGCGCTTGGTTAGTTTGTTCTGCCCA
GATTGTTAAACCTCGGCAGTGTTGTGCGTTGCTTTGCTGGCTACTGCTGC
TGCTGCTGCTGTTGCTTTGTGAGCAGTATTGGGTCTTAACCGTTTTCCAT
GAACAAATTTAGGTAGTTTTCTCTCACTGTTTTGTGTCTTCGTTAATCTT
TCCACGTTGGCGGACGGGACGGCGTAAGTGCCGGGCGGGGCCGAGCGAGT
GCGCACGGAACCGCAGACCTTTATGTTCATCTTGAACGACGAACGGGAGG
ATTTTTGGTCTAGCTCTACTCACGCCGGCGCCAACGAGCCCTGCTTTCGC
CTCGTGTCATGTGTTTTTTGGGGATGTGCCGAAGAGAAAGAGGCTACGGT
GCACTCCTGTGCGGCAACGGAAACTACTGCTGTGCGTGCACAGAGCACGT
ATTCCCCGGAGGACCTCTTCCCTTTCCCCCCTTGTGCCTCTAAAGATCCA
GCTGCTTGCGTCTGTGGTCGAACCACGGCCCACTTTCCTACCGTTTACGG
CACAAGATAACACACCACCCTCTGGACCGTTTTTCAAAGCTTGGTTACTC
CGCAACGAGTATGATTCTAATACCAAGCGACATGTTTTCGGGCAGCTCTT
GATTGAGAAAGATCAAACGCCGCCCTTTTCGGGACTGACGCTCTTCTCGC
TGTGGCGTACTTGAGCTTTGAAAATCGATCCAGGGAGTGTGTTATCTTGC
GTCGTATACTGTAGGCAGGTGCCTGCTCGTTCACCATTTTTGAAGCCATA
TTTTCTCACACCTACATACCCAAACTCAAAATCCCCAGCCTTGTTTTTGT
CGCGAGTTGTTCCCATGTTTTAAAACATTTTCCTTTTCATATGTTCCCCA
GCCACCCGGAGTGGGGCCTGGAAGGGACCAGAATGAAGGCACTCGCGTTG
GGGATCGAGGAGGCGTTGAACAAGAACTTCGTCTCGATCGGACAAGGTCA
GAAGGAATGAATGGGAAGATGCCGATGCCGGTCTGGTCATAAAACGGCAA
AAACCGCCCCGCCGAGGCCGCAGGCCGGTACTTGAATGAGATAAAGCGAA
TGACAGCCACGAGGAGTGAAGCTTTCCGTAAATTACGAGTGTCGAGAATG
CTCGAAAAGAAGGCCCTCTCGGGGTGAGTTGTTGCCGGCCTCGGTTGGTT
GTACTACTTCGGTGTCCATACGTTGACTCTCTTCGTTGCCCGGCGGTCGT
CGAACAGAATGCGACATGTAAAATACCCTGCGGTTTGAAGGCGCGGTGTG
GCTTTTTTGGTTTCCTCCCTGGAAGGTGCGTTGTAACACGGCGCTGGGAT
CGGTGGACACACGCACGCGCACGCGTTTCCTTGCCGTCGTGGCAACAAGC
TGGCGGCGGGTAGGGACCATGTTATCATGTAGGGGGCTAGAAACGAAAGA
TGGCTGAGCCCAGCACGCAGAGATATCTCTCCCTAAGACGATATTTGCGG
GGGGGACACGCACAGCTTAGCTCCACGTAAATAAAGGCCTTGCCTGAAAC
AAACCCCTCTCGCACCACTCTCTGCCGGATTGGCTCCTGTCTCCATTTTT
TTCTCGCCCTCCCGATACCTTCCCGCAGACCGATGGACAACAGCGCCACC
CTTGGAGAGCGCCAAACGAGCAAAACTTTCCAGTCCCACCAACGAAGCAT
CGGTGGTGGCAGCCGCCGCAGCGGCCGCTGCCGCGGCAGCAACTGCACGC
CTGCCGCCAGTCCCCGCGGGCGTTGCGCCCATGCCTGCGCCCGCACCAGC
TGCA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5845:7609..11712- >mRNA_L-elsbetiae_contig5845.14300.1 ID=mRNA_L-elsbetiae_contig5845.14300.1|Name=mRNA_L-elsbetiae_contig5845.14300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1680bp|location=Sequence derived from alignment at L-elsbetiae_contig5845:7609..11712- (Laminarionema elsbetiae ELsaHSoW15) ATGGCATGTTTATTGCCGGATTCAACAACAGCTGTCATCAGCTGGGTCCC CGCCCAACGGGCGTACCAGATCACGTGCATGAGCAAGAACGGGATGGTGG TTGCGGGGAGCTACCACGCAAAGGGCGGCAAAGATGGCATGTTTATTGCC GGATTCAACAACAGCTGTCATCAGCTGGGTCCCCGCCCAACGGGCGTACC AGATCACGTGCATGAGCAAGAACGGGATGGTGGTTGCGGGGAGCTACCAC GCAAAGGGCGGCAAAGAGAAACTCGAGTCGCGAGCCCCGATCAAGCTCGG GCCGGCGTCGATGTACTTTCTGTTGCCAGAGACGGAAGCGCCGGCACCGG CACCGGCTCCCGCCCCGGCACAGAGAAACTCGAGTCGCGAGCCCCGATCA AGCTCGGGCCGGCGTCGATGTACTTTCTGTTGCCAGAGACGGAAGCGCCG GCACCGGCACCGGCTCCCGCCCCGGCACAGGCGCTGCCCCTCCAGAGATC GCAAGCTCCGCCGCCGTCGCAAGCGTCACCGCGACCGCCGCCGGCGGAGA ACGGCACCCTGGCGGTACCGTCATCGACGCCCACACCACAACCGAGGACG GCGGCGGCTGCGAATCCACCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCATCAGCATCAGCGGTGGCGAGCGCCTCTCCCATGGCGAACTTGT TTACCTTCGCCGATATGGTCTCGGGAGCTTTCAGGAGCCAGGAGCTGTCG GCGGCCGCTGCCGCAGGAGGACTCTCCAGCGAGGACTTGCAGAACTGGAT CATGCAAGCGCGCTGCCCCTCCAGAGATCGCAAGCTCCGCCGCCGTCGCA AGCGTCACCGCGACCGCCGCCGGCGGAGAACGGCACCCTGGCGGTACCGT CATCGACGCCCACACCACAACCGAGGACGGCGGCGGCTGCGAATCCACCG GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGCATCAGCGGT GGCGAGCGCCTCTCCCATGGCGAACTTGTTTACCTTCGCCGATATGGTCT CGGGAGCTTTCAGGAGCCAGGAGCTGTCGGCGGCCGCTGCCGCAGGAGGA CTCTCCAGCGAGGACTTGCAGAACTGGATCATGCAAGCCCACCCGGAGTG GGGCCTGGAAGGGACCAGAATGAAGGCACTCGCGTTGGGGATCGAGGAGG CGTTGAACAAGAACTTCGTCTCGATCGGACAAGCCACCCGGAGTGGGGCC TGGAAGGGACCAGAATGAAGGCACTCGCGTTGGGGATCGAGGAGGCGTTG AACAAGAACTTCGTCTCGATCGGACAAGACCGATGGACAACAGCGCCACC CTTGGAGAGCGCCAAACGAGCAAAACTTTCCAGTCCCACCAACGAAGCAT CGGTGGTGGCAGCCGCCGCAGCGGCCGCTGCCGCGGCAGCAACTGCACGC CTGCCGCCAGTCCCCGCGGGCGTTGCGCCCATGCCTGCGCCCGCACCAGC TGCAACCGATGGACAACAGCGCCACCCTTGGAGAGCGCCAAACGAGCAAA ACTTTCCAGTCCCACCAACGAAGCATCGGTGGTGGCAGCCGCCGCAGCGG CCGCTGCCGCGGCAGCAACTGCACGCCTGCCGCCAGTCCCCGCGGGCGTT GCGCCCATGCCTGCGCCCGCACCAGCTGCA back to top
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