mRNA_L-elsbetiae_contig584.14289.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Match: D8LBQ0_ECTSI (Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ0_ECTSI) HSP 1 Score: 431 bits (1109), Expect = 8.380e-141 Identity = 243/307 (79.15%), Postives = 261/307 (85.02%), Query Frame = 3 Query: 645 MYDDFDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTAVRAVVVSGIGEHFSAGLDLADTTNFDAIGAATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAVEAAAMGFVSRVVTA------------------------AAXXXXXXXXXXVAPSRRADVVDASLLTASEIAKQSPVAVFGTKRNLMYARDHSVGDGLEYAATWSGAALQAGDLGTAMRAAA 1493 MYD F+TL +S PA VLHVQINRP+K NAM+AKFW+E R CFQLI+ED VRAVVVSG+G+HFSAGLDL+DTTNFDAIG ATKDVARRAFRFRKLALAMQESF+AVERCPQPVIAAIHGACVGGAVDLACACD+RLCSEDA FC+AEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGA EA+ MGFVSRVV A A XXXXXXXXXX S+RA+VV AS+LTASEIA+QSPVAVFGTKRNL+YARDHSV DGLEYAATWSGAALQAGDL TAMRAAA Sbjct: 1 MYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDIRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAA 307
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Match: A0A7D9IU21_PARCT (Delta(3,5)-Delta(2,4)-dienoyl- isomerase, mitochondrial n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IU21_PARCT) HSP 1 Score: 262 bits (669), Expect = 1.610e-76 Identity = 149/291 (51.20%), Postives = 185/291 (63.57%), Query Frame = 3 Query: 615 TVFRANPGSTMYDDFDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTAVRAVVVSGIGEHFSAGLDLADTTNFDAIGAATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAVEAAAMGFVSRVVTAAAXXXXXXXXXXVAPSRRADVVDASLLTASEIAKQSPVAVFGTKRNLMYARDHSVGDGLEYAATWSGAALQAGDLGTAMRA 1487 TVF + ST F+TL ++ P V V INRP K NAM+ FW E CF IA DT RAVV+SG G+ F+AGLDL D + +DV+RRA+ RK L QESFS +E+CPQPVIAAIH ACVGG VD+ CACD+R C+ DA F + EV++GLAADVGTLQR+PKIVGNESL REL YT R + EA + G VSR+ R ++D++L AS IAK SPVAV GTK NL Y+RDH V + LEY A+W+ + LQ D+ A++A Sbjct: 28 TVFISRMMSTQEYKFETLEVTKPRDHVFQVNINRPEKRNAMNQTFWSEMVTCFNKIATDTECRAVVLSGAGKIFTAGLDLMDMASVIMSQQDDQDVSRRAYNMRKTILQFQESFSVIEKCPQPVIAAIHSACVGGGVDMICACDIRWCTSDAWFQVKEVELGLAADVGTLQRLPKIVGNESLVRELCYTSRKLMSEEAKSFGLVSRIF-----------------QDRESLIDSALDLASHIAKMSPVAVSGTKHNLNYSRDHPVDESLEYIASWNMSMLQTDDILKAVQA 301
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Match: A0A6P8I096_ACTTE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I096_ACTTE) HSP 1 Score: 256 bits (655), Expect = 2.140e-74 Identity = 144/278 (51.80%), Postives = 182/278 (65.47%), Query Frame = 3 Query: 657 FDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTAVRAVVVSGIGEHFSAGLDLADTTN-FDAIGAATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAVEAAAMGFVSRVVTAAAXXXXXXXXXXVAPSRRADVVDASLLTASEIAKQSPVAVFGTKRNLMYARDHSVGDGLEYAATWSGAALQAGDLGTAMRA 1487 ++TL +S PA VL V++NRP K NAM+ FW E +CF I D+ R VVV+G G+ F+AGLDL D F G D AR+A RK+ L+ QESFS +E+CP+PVIAAIH AC+GG VDL CACD+RLCS DA F I EV +GLAADVGTLQR+PKIVGN+SL REL+YT R A EA G VS + P + + ++ A+ AS+IA +SPVAV GTK NL Y+RDHSV +GL Y ATW+ + LQ D+ A++A Sbjct: 50 YETLAVSQPADHVLRVELNRPEKRNAMNQAFWREMVECFNKITNDSDCRXVVVTGAGKIFTAGLDLMDMAGVFMQAGPENADAARKAAELRKIILSYQESFSVIEKCPKPVIAAIHSACIGGGVDLVCACDIRLCSSDAWFQIKEVDIGLAADVGTLQRLPKIVGNDSLVRELSYTARRLPANEAKEAGLVSHIY----------------PDKES-LISAATAMASKIASKSPVAVMGTKHNLNYSRDHSVEEGLNYMATWNMSMLQTEDIMKAVQA 310
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Match: A0A8B6EPU1_MYTGA (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase n=3 Tax=Mytilus TaxID=6548 RepID=A0A8B6EPU1_MYTGA) HSP 1 Score: 252 bits (643), Expect = 6.660e-73 Identity = 141/282 (50.00%), Postives = 187/282 (66.31%), Query Frame = 3 Query: 624 RANPGSTMYDDFDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTAVRAVVVSGIGEHFSAGLDLADTTNFDAIGAATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAVEAAAMGFVSRVVTAAAXXXXXXXXXXVAPSRRADVVDASLLTASEIAKQSPVAVFGTKRNLMYARDHSVGDGLEYAATWSGAALQAGDL 1469 R G T YD F+TL +SSP V HV++NRP ++NAM+ FW E R+CFQ +A D R ++VSG G F+AGLDL D + G KDVAR F+ R QESF+++E+CP+PVIAA+HG CVGG VDL ACD+R C++DA F I E+ VGL ADVGTLQR+PKI+GN+SL REL YT R F + EA +GFVSR+ P + A +++A++ AS IA +SPVAV GTK +++Y+RDHSV +GL + A W+ A LQ+ D+ Sbjct: 28 RKMSGETSYD-FETLKVSSPREDVAHVELNRPDRLNAMNIAFWRECRECFQKLAIDKNYRVIIVSGAGRLFTAGLDLMDMGDVMPTG---KDVARNCFKMRPKIEEYQESFTSIEKCPKPVIAAVHGGCVGGGVDLTSACDIRYCTQDAWFQIKEIDVGLTADVGTLQRLPKIIGNDSLARELCYTARKFHSDEAKEIGFVSRIF----------------PDKAA-MINAAIELASLIASKSPVAVQGTKVSMVYSRDHSVPEGLAHIALWNQAMLQSEDV 288
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Match: UPI001F04F430 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04F430) HSP 1 Score: 251 bits (642), Expect = 9.850e-73 Identity = 141/287 (49.13%), Postives = 185/287 (64.46%), Query Frame = 3 Query: 627 ANPGSTMYDDFDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTAVRAVVVSGIGEHFSAGLDLADTTNFDAIGAATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAVEAAAMGFVSRVVTAAAXXXXXXXXXXVAPSRRADVVDASLLTASEIAKQSPVAVFGTKRNLMYARDHSVGDGLEYAATWSGAALQAGDLGTAMRA 1487 A S + DF+TL ++ P V V INRP K NAM+ FW E CF+ IA ++ R VV+S G+ F+AGLDL D ++ + KDV+R+A+ RK + QESFS +ERCPQPVIAAIH ACVGG VD+ C+CD+R C+ DA F I EV++GLAADVGTLQR+PKIVGNESL REL +T R F A EA + G VSR+ + +++ +L AS IAK SP+A+ GTK+NL Y+RDH V + LEY ATW+ + LQ D+ A++A Sbjct: 28 AQMSSLLNHDFETLELTQPRNHVYQVNINRPEKRNAMNQTFWKEMVTCFEKIANESDCRVVVLSAAGKIFTAGLDLMDFSSI-VLQQDDKDVSRKAYNMRKTIVQCQESFSVIERCPQPVIAAIHSACVGGGVDMICSCDIRWCTSDAWFQIKEVELGLAADVGTLQRLPKIVGNESLVRELCFTARKFMAEEAKSFGLVSRIF-----------------QDKESLLNGALDLASHIAKMSPIAITGTKKNLNYSRDHGVDESLEYMATWNMSMLQTEDILKAVQA 296
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Match: A0A835YKC1_9STRA (Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC1_9STRA) HSP 1 Score: 249 bits (637), Expect = 3.480e-72 Identity = 137/278 (49.28%), Postives = 182/278 (65.47%), Query Frame = 3 Query: 648 YDDFDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTAVRAVVVSGIGEHFSAGLDLAD----TTNFDAIGAATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAVEAAAMGFVSRVVTAAAXXXXXXXXXXVAPSRRADVVDASLLTASEIAKQSPVAVFGTKRNLMYARDHSVGDGLEYAATWSGAALQAGDL 1469 Y F+TL + VLHV++NRP + NAM+A++W E R+ F IA D VRAVV+SG G+HFSAG+D+ T N + DVAR A + ++L L+MQESF+ + RCPQPVIAAIHGAC+GGAVDL ACD+R CS+ A F + EV VGL ADVGTLQR+P++VGN+S R++ Y+ RTFGA EA G VS+V + R ++ A++ A+ IA SP+AV GTKR+L +++DHSV DGL + A W+ AAL DL Sbjct: 5 YVGFETLAVRVAVPHVLHVELNRPNRANAMNAQYWHEMRRLFAAIAVDPEVRAVVISGAGKHFSAGIDMQPGQQPTGNLLSGPGKNSDVARHALKLQQLVLSMQESFTCITRCPQPVIAAIHGACMGGAVDLITACDMRFCSDCALFSVKEVAVGLCADVGTLQRLPRVVGNQSWVRDICYSARTFGAAEAKEFGLVSKVCSGG----------------REGILAAAMEAAAVIAAHSPLAVTGTKRSLEWSQDHSVADGLAHVALWNSAALMTKDL 266
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Match: UPI001CF3EB97 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3EB97) HSP 1 Score: 249 bits (637), Expect = 7.840e-72 Identity = 137/288 (47.57%), Postives = 192/288 (66.67%), Query Frame = 3 Query: 624 RANPGSTMYDDFDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTAVRAVVVSGIGEHFSAGLDLADTTNFDAIGAATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAVEAAAMGFVSRVVTAAAXXXXXXXXXXVAPSRRADVVDASLLTASEIAKQSPVAVFGTKRNLMYARDHSVGDGLEYAATWSGAALQAGDLGTAMRA 1487 +A ST F+TL +S P V+HV++NRP K NAM+ FW E +CF+ IA+D+ RAVV++G G+ F+AGLDL + D + + +D +RRAF RK L++Q+SF +E CPQPVIAA+H C+GG +D+ C+CD+RLCS DA F + E+ +GLAAD+GTLQ+ PKIVGN+SL REL YTGR+F + EA +GFVSR+ S R +V ++ A+EI+K+SPVA+ G K NL + R+HS G+EY ATW+ A LQ+ D+ A++A Sbjct: 42 KARMNSTGSYSFETLAVSKPHEHVIHVELNRPEKRNAMNKAFWREMVECFKQIADDSNCRAVVLTGAGKIFTAGLDLREMGG-DLMNSG-QDPSRRAFYLRKFILSLQKSFQVIEECPQPVIAAVHSGCLGGGIDMICSCDIRLCSADAWFQVKEIDLGLAADLGTLQKFPKIVGNDSLARELCYTGRSFTSQEALNLGFVSRMC-----------------SDRESLVKEAVELATEISKKSPVAMAGIKHNLNFTREHSPKAGMEYMATWNMAMLQSEDILKAVQA 310
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Match: A0A6M5KEJ4_9DINO (Dienoyl coA isomerase n=1 Tax=Gambierdiscus pacificus TaxID=439314 RepID=A0A6M5KEJ4_9DINO) HSP 1 Score: 248 bits (632), Expect = 1.080e-71 Identity = 139/284 (48.94%), Postives = 180/284 (63.38%), Query Frame = 3 Query: 648 YDDFDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTAVRAVVVSGIGEHFSAGLDLAD----TTNFDAIGAATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAVEAAAMGFVSRVVTAAAXXXXXXXXXXVAPSRRADVVDASLLTASEIAKQSPVAVFGTKRNLMYARDHSVGDGLEYAATWSGAALQAGDLGTAMRA 1487 Y ++TL ++ +LHV++NRP K+NAM+ +FW E R+CF AEDT RA+V+S G FS+GLDL+D + A G +D R A+R R+ L QESF+A+E CPQPVI HGA VGG +DL C C +R S DA F I EV +GLAADVGTLQR+PKI+GNE RELAYT R F A EA A+GF++R+ R + A++ A EIA++ P+AV GTKR L + R+HSV DGLEY ATW+GA +Q+ DL TA A Sbjct: 3 YGPYETLRVTKEDG-ILHVELNRPQKLNAMNRRFWQETRECFSAAAEDTEARAIVISAQGRAFSSGLDLSDMAPPASEEPASGKPKRDAGRLAYRIRREVLHTQESFNAIEACPQPVIVVGHGAVVGGGIDLMCTCCIRYASRDAWFTIKEVDIGLAADVGTLQRLPKIIGNEGAVRELAYTARKFTAEEALALGFLTRLF-----------------DTRDQALAAAMSLAKEIAQKPPLAVVGTKRMLDFTRNHSVQDGLEYVATWNGAMMQSPDLATAAAA 268
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Match: A0A2B4RA31_STYPI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RA31_STYPI) HSP 1 Score: 249 bits (636), Expect = 1.090e-71 Identity = 143/288 (49.65%), Postives = 189/288 (65.62%), Query Frame = 3 Query: 612 TTVFRANP--GSTMYDDFDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTAVRAVVVSGIGEHFSAGLDLADTTNFDAIGAATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAVEAAAMGFVSRVVTAAAXXXXXXXXXXVAPSRRADVVDASLLTASEIAKQSPVAVFGTKRNLMYARDHSVGDGLEYAATWSGAALQAGDL 1469 + V R+N ST F+TL ++ P V+ V++NRP K NAM+ FW E CF+ IA+D RAVV++G G+ F+AGLDL D + + ++ + +RRA RKL L +Q+SF +E+CPQPVIAA H ACVGG VD+ C+CD+RLCS DA F I E+ +GLAAD+GTLQ+ PKI+GN+SL REL +TGR F A EA GFVSRV +P R + V +A L A +IAK+SPVA+ GTK NL ++RDHS +GLEY ATW+ A LQ D+ Sbjct: 36 SAVHRSNTRMNSTEPYKFETLAVTKPLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDLMDMGS--NLMSSDLEPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKEIDIGLAADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSRV----------------SPGRDSLVKEA-LELAGQIAKKSPVAMAGTKHNLNFSRDHSAQEGLEYMATWNMAMLQTEDI 304
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Match: A0A1W0XB33_HYPDU (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0XB33_HYPDU) HSP 1 Score: 249 bits (636), Expect = 1.570e-71 Identity = 133/279 (47.67%), Postives = 182/279 (65.23%), Query Frame = 3 Query: 657 FDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTAVRAVVVSGIGEHFSAGLDLADTTNFDAIGAATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDARFCIAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAVEAAAMGFVSRVVTAAAXXXXXXXXXXVAPSRRADVVDASLLTASEIAKQSPVAVFGTKRNLMYARDHSVGDGLEYAATWSGAALQAGDLGTAMRAAA 1493 F TL ++ P +L V++NRP ++NA++ W E R+CF++IA D+ R V++ G+G+HF AG+DL+D + +I D AR+ F+FR L ++Q +F+A+E CP+PVIAAIHG C+G VD+ ACD+R C+ DA F I EV +G+AADVGTLQR PKIVGN+SL RE A TGR F A EA+ +GFVSR + RA ++ +L A +IA +SPVA+ TK NL Y+RDHSV +GL+ W G ALQ DL TA A+A Sbjct: 60 FKTLNVAKPDFGILQVELNRPDRLNAINKDAWREIRECFEVIALDSDCRVVILGGLGKHFCAGIDLSDIADLTSIIGTDSDPARKGFQFRSLVRSLQATFNAIEECPKPVIAAIHGGCIGAGVDMTSACDIRYCTHDAFFSIKEVDIGMAADVGTLQRFPKIVGNDSLVREFALTGRNFSASEASKIGFVSRTFDS-----------------RASMMSLALDVAKKIASKSPVAIQSTKINLNYSRDHSVHEGLQNQINWQGFALQTEDLMTAAMASA 321 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig584.14289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig584.14289.1 >prot_L-elsbetiae_contig584.14289.1 ID=prot_L-elsbetiae_contig584.14289.1|Name=mRNA_L-elsbetiae_contig584.14289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=322bp MYDDFDTLIISSPAACVLHVQINRPAKVNAMDAKFWVEFRQCFQLIAEDTback to top mRNA from alignment at L-elsbetiae_contig584:12622..18518+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig584.14289.1 ID=mRNA_L-elsbetiae_contig584.14289.1|Name=mRNA_L-elsbetiae_contig584.14289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5897bp|location=Sequence derived from alignment at L-elsbetiae_contig584:12622..18518+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig584:12622..18518+ >mRNA_L-elsbetiae_contig584.14289.1 ID=mRNA_L-elsbetiae_contig584.14289.1|Name=mRNA_L-elsbetiae_contig584.14289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1932bp|location=Sequence derived from alignment at L-elsbetiae_contig584:12622..18518+ (Laminarionema elsbetiae ELsaHSoW15)back to top |