mRNA_L-elsbetiae_contig5805.14240.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Match: D8LIL5_ECTSI (Cyclin D1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIL5_ECTSI) HSP 1 Score: 323 bits (827), Expect = 1.470e-109 Identity = 152/171 (88.89%), Postives = 164/171 (95.91%), Query Frame = 1 Query: 1 QADEDSPSVLFAGRYEEAECNMPMISELADATEMSLTTPIVTRGELDLVQNRLQWDVSRVTAMHFLGYYTSQGVTMPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAASILAARRALCIKPVWRDELTELTGYKLEDVVECGEELWNFYEKMFPSHK 513 +ADEDSPSVL+ GRYEEAECNMPMISELADATEMSLTT IVTRGELDLVQNRL+WDVSRVTAMHFLGYYTSQGVT PDDTCQGRRLVEKVVTYMNKYVDFFANLCQQ YQFQRYKPSHIAAA+IL ARRALCIKP+WRDELT+LTGYKLE++ +CGE+LW+FYEKMFP H+ Sbjct: 113 KADEDSPSVLYKGRYEEAECNMPMISELADATEMSLTTSIVTRGELDLVQNRLEWDVSRVTAMHFLGYYTSQGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAAAAILTARRALCIKPMWRDELTDLTGYKLEEISDCGEDLWHFYEKMFPLHR 283
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Match: A0A835ZBR6_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR6_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.580e-68 Identity = 107/160 (66.88%), Postives = 122/160 (76.25%), Query Frame = 1 Query: 34 AGRYEEAECNMPMISELADATEMSLTTPIVTRGELDLVQNRLQWDVSRVTAMHFLGYYTSQGVTMPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAASILAARRALCIKPVWRDELTELTGYKLEDVVECGEELWNFYEKMFPSHK 513 A +YEEAE NMPM+SE+A A E LTT +VT+GEL L + L WD+SRVTAMHFLGYY QGVT D CQGR LV KV YM KYV+FFANLCQQDY FQR++PS IAAASILAARRALCI P+WR EL LTG D+ C EE+W FYE MFP+H+ Sbjct: 66 AAKYEEAERNMPMVSEMAIAAETRLTTGMVTQGELSLARG-LGWDISRVTAMHFLGYYLHQGVTFLSDECQGRALVTKVTRYMKKYVEFFANLCQQDYSFQRHRPSTIAAASILAARRALCIAPLWRPELERLTGCAPRDIQACAEEVWAFYEAMFPTHQ 224
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Match: A0A7S1YXT2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YXT2_TRICV) HSP 1 Score: 146 bits (368), Expect = 4.790e-40 Identity = 72/165 (43.64%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 25 VLFAGRYEEAECNMPMISELADATEM---SLTTPIVTRGELDLVQNRLQWDVSRVTAMHFLGYYTSQGVTMPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAASILAARRALCIKPVWRDELTELTGYKLEDVVECGEELWNFYEKMFPSH 510 + A +YEEAE + P I EL T++ T GEL ++Q+ L W + + +H +GYY S+G T DDT QGR L+EK+ Y+ KYV+FF NL Q+Y FQ+Y P+H+AAA +LA+R AL ++P WR EL +TGY+ ++V+ +W +YE+ FP H Sbjct: 120 ISVAAKYEEAEEHCPPIPELLQLTKLCNSGHTALSFREGELAVLQH-LGWRLRAIPPLHIVGYYLSKGATFEDDTWQGRALIEKIPKYVKKYVEFFCNLTLQEYSFQQYLPTHLAAAILLASRVALQLEPRWRPELARVTGYEDHEIVDVFTHVWRYYEEQFPGH 283
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Match: A0A1E7FL21_9STRA (Cyclin-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FL21_9STRA) HSP 1 Score: 144 bits (364), Expect = 5.470e-40 Identity = 74/165 (44.85%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 25 VLFAGRYEEAECNMPMISELADATEMSLT--TPIVTR-GELDLVQNRLQWDVSRVTAMHFLGYYTSQGVTMPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAASILAARRALCIKPVWRDELTELTGYKLEDVVECGEELWNFYEKMFPSH 510 + A +YEEAE + P I EL T++ TP+ R GEL++++ L W + V +H +GY+ ++G +DT QGR L+EK+ YM KY DFF NL Q+Y FQ+Y PSH+AAA ILA+R AL I+P WR EL LTGY ++ + +W++YE+ FP H Sbjct: 74 ISVAAKYEEAEEHCPPIPELLRLTKLGNAGHTPLSFRDGELEVLRY-LNWQLRAVPPIHVVGYFLAKGAVFYEDTWQGRSLIEKIPKYMKKYADFFCNLTLQEYSFQQYLPSHLAAAVILASRVALNIEPRWRPELVRLTGYSEIEITDAFHHVWSYYEEQFPGH 237
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Match: B8BTM7_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTM7_THAPS) HSP 1 Score: 146 bits (368), Expect = 8.070e-40 Identity = 71/162 (43.83%), Postives = 106/162 (65.43%), Query Frame = 1 Query: 34 AGRYEEAECNMPMISELADATEMSL---TTPIVTRGELDLVQNRLQWDVSRVTAMHFLGYYTSQGVTMPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAASILAARRALCIKPVWRDELTELTGYKLEDVVECGEELWNFYEKMFPSH 510 A +YEEAE + P I +L T++S T+ GE+ +++N L W + + +H +GYY S+G T DD QGR L+EK+ Y+ KY +FF NL Q+Y FQ+Y P+H+AAA +LA+R AL I P WR EL ELTG++ +++ E + +W++YE+ FP H Sbjct: 146 AAKYEEAEEHCPHIPDLLRLTKLSSVGHTSLSFREGEVQVLRN-LGWKLRAIPPLHVIGYYLSKGATFVDDAWQGRSLIEKIPKYIKKYAEFFCNLTLQEYSFQQYLPTHLAAAILLASREALQISPRWRPELEELTGFEEKEIGEAFQHVWSYYEEQFPGH 306
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Match: A0A7S0A123_9STRA (Hypothetical protein n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0A123_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.670e-38 Identity = 67/160 (41.88%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 40 RYEEAECNMPMISELADATEMSL---TTPIVTRGELDLVQNRLQWDVSRVTAMHFLGYYTSQGVTMPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAASILAARRALCIKPVWRDELTELTGYKLEDVVECGEELWNFYEKMFPSH 510 +YEEAE + P I +L T++++ T+ GELD+++ L W + + +HF+GY+ ++G DDT QGR L+EK+ Y+ KY +FF NL Q+Y FQ+Y PS +AAA +LA+R AL ++P WR EL LTGY+ +D+ + +W++Y++ FP H Sbjct: 1 KYEEAEEHCPPIPDLLQLTKLNVAGHTSYSFREGELDVLRY-LGWRLRAIPPIHFIGYFLAKGSVFVDDTWQGRPLIEKIPKYVKKYTEFFCNLTLQEYSFQQYLPSLLAAAILLASRTALQLEPRWRPELVRLTGYEEQDLSSAFQHVWSYYDEQFPGH 159
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Match: A0A7S3L9W8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9W8_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.170e-37 Identity = 72/166 (43.37%), Postives = 106/166 (63.86%), Query Frame = 1 Query: 31 FAGRYEEAECNMPMISELADATEM------SLTTPIVTRGELDLVQNRLQWDVSRVTAMHFLGYYTSQGVTMPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAASILAARRALCIKPVWRDELTELTGYKLEDVVECGEELWNFYEKMFPSH 510 A +YEEAE + P I +L T++ SLT GE+ ++++ L W + A+H +GYY S+G DDT QGR L+EK+ Y+ KY +FF NL QDY+FQ+Y P+ +AAA +LA+R AL ++P WR EL +LTGY+ E++V+ +W +YE+ FP H Sbjct: 170 IAAKYEEAEEHCPPIPDLLSLTKLASAGHNSLT---FREGEVQVLKH-LGWRLRAFPAIHVIGYYLSKGACFEDDTWQGRGLIEKIPRYVKKYAEFFCNLTLQDYEFQQYLPTQLAAAILLASRVALQLEPRWRPELVQLTGYEEEEIVDIFHHVWAYYEEQFPGH 331
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Match: A0A1Z5JHV1_FISSO (Cyclin N-terminal domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHV1_FISSO) HSP 1 Score: 136 bits (342), Expect = 5.660e-36 Identity = 68/165 (41.21%), Postives = 102/165 (61.82%), Query Frame = 1 Query: 25 VLFAGRYEEAECNMPMISELADATEMSLT---TPIVTRGELDLVQNRLQWDVSRVTAMHFLGYYTSQGVTMPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAASILAARRALCIKPVWRDELTELTGYKLEDVVECGEELWNFYEKMFPSH 510 + A +YEEAE + P I EL T++S + + GE+++++ RL W + A+H +GY ++G DD QGR L+ K+ Y+ KY +FF NL QDY FQ+Y+PS +AAA+++A+R AL I+P WR EL TGY D++ LW++YE+ FP H Sbjct: 144 ITVAAKYEEAEEHCPHIPELLRFTKLSQSGYDSLAFRDGEVEILK-RLGWQLRAFPALHVVGYILAKGACFVDDAWQGRHLIPKIPRYLKKYAEFFCNLALQDYSFQQYRPSILAAAAVMASRVALQIEPKWRPELVRRTGYDEFDILPIFNHLWSYYEEQFPGH 307
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Match: A0A7S3QJF9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJF9_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.050e-35 Identity = 68/165 (41.21%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 25 VLFAGRYEEAECNMPMISELADATEMSL---TTPIVTRGELDLVQNRLQWDVSRVTAMHFLGYYTSQGVTMPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAASILAARRALCIKPVWRDELTELTGYKLEDVVECGEELWNFYEKMFPSH 510 + A +YEEAE + P I +L T +S T+ GE++ ++ L W + + +HF+GY+ ++G DDT Q R L+EK+ Y+ KY DFF NL Q+Y FQ+Y PS +AAA +LA+R AL ++P WR ELT LTG + ++ LW +YE+ FP H Sbjct: 154 ISIAAKYEEAEEHCPPIPDLLQLTRLSQAGHTSLSFRDGEVECLKF-LGWRLRAIPPIHFIGYFLAKGAIFQDDTWQDRNLIEKIPKYVKKYADFFCNLTLQEYSFQQYLPSELAAAILLASRVALQLQPRWRPELTTLTGQEESQIIHIFNHLWGYYEEQFPGH 317
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Match: A0A7S0FMS6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMS6_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.310e-35 Identity = 58/135 (42.96%), Postives = 89/135 (65.93%), Query Frame = 1 Query: 112 TPIVTR-GELDLVQNRLQWDVSRVTAMHFLGYYTSQGVTMPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQDYQFQRYKPSHIAAASILAARRALCIKPVWRDELTELTGYKLEDVVECGEELWNFYEKMFPSHK 513 TP+ R GE++++++ L W + + A+H +GYY S+G DDT QGR L+EK+ Y+ KY DFF NL Q+Y FQ+Y PS +AAA ++A+R AL + P WR E+T LTGY+ ++ + +W +Y + FP + Sbjct: 6 TPLAFRDGEVEVLKH-LNWTLRAIPALHVVGYYLSKGAVFVDDTWQGRDLIEKIPRYVKKYADFFCNLTMQEYSFQKYLPSQLAAAILMASREALSVAPRWRPEMTALTGYEESEITPIFDHVWKYYAEQFPDRQ 139 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5805.14240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5805.14240.1 >prot_L-elsbetiae_contig5805.14240.1 ID=prot_L-elsbetiae_contig5805.14240.1|Name=mRNA_L-elsbetiae_contig5805.14240.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp QADEDSPSVLFAGRYEEAECNMPMISELADATEMSLTTPIVTRGELDLVQback to top mRNA from alignment at L-elsbetiae_contig5805:5647..11814- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5805.14240.1 ID=mRNA_L-elsbetiae_contig5805.14240.1|Name=mRNA_L-elsbetiae_contig5805.14240.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6168bp|location=Sequence derived from alignment at L-elsbetiae_contig5805:5647..11814- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5805:5647..11814- >mRNA_L-elsbetiae_contig5805.14240.1 ID=mRNA_L-elsbetiae_contig5805.14240.1|Name=mRNA_L-elsbetiae_contig5805.14240.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1026bp|location=Sequence derived from alignment at L-elsbetiae_contig5805:5647..11814- (Laminarionema elsbetiae ELsaHSoW15)back to top |