mRNA_L-elsbetiae_contig5792.14213.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5792.14213.1
Unique NamemRNA_L-elsbetiae_contig5792.14213.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 7.050e-62
Identity = 95/134 (70.90%), Postives = 112/134 (83.58%), Query Frame = 1 
Query:   19 RVIPPPAVLLKRFDMANRIYGYLLDKKTKQPLFRPEVWNAVKRLRVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMRLLIAWCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSSVGGF 420
            R+IP PA LL+RFD+ N +YG L+DKKTKQPLFR E   A+KRLRVHI   C SD P   LYFEAG+D+ T   L+RC+RGTNDLEGYHLHMRLL+AWCISP+LAHLLLLE+NYRWNLRQ+++NRGLD +VGGF
Sbjct:  206 RLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGF 339
[Close]
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 5.190e-61
Identity = 96/134 (71.64%), Postives = 112/134 (83.58%), Query Frame = 1 
Query:   19 RVIPPPAVLLKRFDMANRIYGYLLDKKTKQPLFRPEVWNAVKRLRVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMRLLIAWCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSSVGGF 420
            R+IP PA LLKRFD+ N +YG LLDKKTKQPLFR E   A+KRLRVHI   C SD P   LYFEAG+D+ T   L+RC+RGTNDLEG+HLHMRLL+AWCISP+LAHLLLLE+NYRWNLRQ+++NRGLD +VGGF
Sbjct:  381 RLIPRPAELLKRFDVVNNLYGGLLDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDAPNEALYFEAGKDAETLCPLFRCIRGTNDLEGFHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGF 514
[Close]
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 4.440e-59
Identity = 95/134 (70.90%), Postives = 112/134 (83.58%), Query Frame = 1 
Query:   19 RVIPPPAVLLKRFDMANRIYGYLLDKKTKQPLFRPEVWNAVKRLRVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMRLLIAWCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSSVGGF 420
            R+IP PA LL+RFD+ N +YG L+DKKTKQPLFR E   A+KRLRVHI   C SD P   LYFEAG+D+ T   L+RC+RGTNDLEGYHLHMRLL+AWCISP+LAHLLLLE+NYRWNLRQ+++NRGLD +VGGF
Sbjct:  779 RLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGF 912
[Close]
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Match: A0A1Y2A9B5_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2A9B5_9FUNG)

HSP 1 Score: 146 bits (369), Expect = 3.080e-38
Identity = 76/136 (55.88%), Postives = 89/136 (65.44%), Query Frame = 1 
Query:   16 HRVIPPPAVLLKRFDMANRIYGYLLDKKTKQPLFRPEVWNAVKRLRVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMR-LLIAWCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSSVGGF 420
            HR+IP    LLKR+D     +  +LD KT +PLFR      V+ LR HI+ GCLSD P +PLYF  GR S  G  +YRC RGTN  EGYH HMR LL  +  SP L HLLLLE N+RWN+R AV+NRGL S  GGF
Sbjct:  509 HRLIPCKEELLKRYDFVCNTFQDILDSKTNEPLFRSNTKKEVRNLRKHIQNGCLSDVPDIPLYFLEGRTSQ-GLPIYRCARGTNSNEGYHRHMRKLLHHYASSPMLLHLLLLEFNFRWNIRMAVKNRGLPSEYGGF 643
[Close]
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 6.040e-36
Identity = 69/133 (51.88%), Postives = 93/133 (69.92%), Query Frame = 1 
Query:   19 RVIPPPAVLLKRFDMANRIYGYLLDKKTKQPLFRPEVWNAVKRLRVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMRLLIA-WCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSSVG 414
            R++PPP+ LLKRFD   + +G  +D  +K+ L RP+   AV  LR HI AGCLSDP GV +Y+  G+ +  G   YRCVRGTND+EGYH ++R L+A +C SP LA  +LLE N+RWNL+  V+NRGL + +G
Sbjct:  620 RLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGK-TTDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELG 751
[Close]
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 6.810e-35
Identity = 71/135 (52.59%), Postives = 94/135 (69.63%), Query Frame = 1 
Query:   19 RVIPPPAVLLKRFDMANRIYGYLLDKKTKQPLFRPEVWNAVKRLRVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMR-LLIAWCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSSVGGF 420
            R++P    LL+RF++  R +  ++D K+ + L RP    AV+ LR HIE+GCLSDP  VPLY+ +G++SA G +  RCVRGTN  EGYH ++R LL  +C SP LAH +LLE NYRWN+R AV+NRGL   VG F
Sbjct:  256 RLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSA-GITTRRCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEF 389
[Close]
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 7.790e-35
Identity = 68/134 (50.75%), Postives = 93/134 (69.40%), Query Frame = 1 
Query:   19 RVIPPPAVLLKRFDMANRIYGYLLDKKTKQPLFRPEVWNAVKRLRVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMRLLIA-WCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSSVGG 417
            R++P   VLLKRFD     +G  +D  + + L RP+   AV++LR HIE  CLSDP G+ +YF  G++   G + YRCVRGTND+EGYH ++R L+A +C SP LA  +LLE NYRWNLR  ++NRGL +++GG
Sbjct:  576 RLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKH-GLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGG 708
[Close]
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 6.420e-32
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 1 
Query:   19 RVIPPPAVLLKRFDMANRIYGYLLDKKTKQPLFRPEVWNAVKRLRVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMR-LLIAWCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSSVGGF 420
            R++P    LL+RF++  R +  ++D K+ + L RP    AV+ LR HIE+GCLSDP  VPLY+      + G +  RCVRGTN  EGYH ++R LL  +C SP LAH +LLE NYRWN+R AV+NRGL   VG F
Sbjct:  256 RLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYT----KSAGITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEF 386
[Close]
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Match: A0A6H5K9U3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U3_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.290e-30
Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 1 
Query:   73 IYGYLLDKKTKQPLFRPEVWNAVKRLRVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMR-LLIAWCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSSVGGF 420
            ++G ++D K+ + L R +    V  L  HIE GCLSDP GVPLY+  G+++A G + +RCVRGTN  EGYH ++R LL ++C SP LAH +LLE N+RWN+R AV+NRGL   VG F
Sbjct:    1 MFGNVVDAKSGEKLLRSDAMKDVNLLLKHIETGCLSDPEGVPLYYPTGQNAA-GITTHRCVRGTNCTEGYHRYLRRLLSSYCASPALAHSVLLEFNFRWNVRMAVKNRGLPREVGEF 116
[Close]
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.630e-30
Identity = 64/130 (49.23%), Postives = 84/130 (64.62%), Query Frame = 1 
Query:   19 RVIPPPAVLLKRFDMANRIYGYLLDKKTKQPLFRPEVWNAVKRLRVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMRLLIAWCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSS 408
            R++PPP+ LLK FD     +G  +D  +K+ L RP+   AV+ LR HI AGCLSDP GV +Y+  G+ +  G   YRCVRGTND+EGYHL      ++  SP LA  +LLE N+RWNL+  V+NR  D S
Sbjct:  868 RLVPPPSELLKPFDKVVEEFGNCVDNVSKEALLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGK-TTDGLVRYRCVRGTNDVEGYHL-----ASYSASPALAQSVLLEFNFRWNLKMMVKNRDWDPS 991
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5792.14213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD89_9PHAE7.050e-6270.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEU8_9PHAE5.190e-6171.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JET4_9PHAE4.440e-5970.903'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A1Y2A9B5_9FUNG3.080e-3855.883'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7G3Q9_ECTSI6.040e-3651.883'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JPK9_9PHAE6.810e-3552.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRJ6_9PHAE7.790e-3550.753'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KLP1_9PHAE6.420e-3250.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9U3_9PHAE1.290e-3052.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4M0_9PHAE1.630e-3049.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5792contigL-elsbetiae_contig5792:987..1406 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score142.5
Seed ortholog evalue1.5e-31
Seed eggNOG ortholog2880.D7G3Q9
Preferred nameWRN
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Exons1
Model size420
Cds size420
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816621.8010697-CDS-L-elsbetiae_contig5792:986..14061622816621.8010697-CDS-L-elsbetiae_contig5792:986..1406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5792 987..1406 -
1691683691.3887684-CDS-L-elsbetiae_contig5792:986..14061691683691.3887684-CDS-L-elsbetiae_contig5792:986..1406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5792 987..1406 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5792.14213.1prot_L-elsbetiae_contig5792.14213.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5792 987..1406 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5792.14213.1

>prot_L-elsbetiae_contig5792.14213.1 ID=prot_L-elsbetiae_contig5792.14213.1|Name=mRNA_L-elsbetiae_contig5792.14213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
VCAPHHRVIPPPAVLLKRFDMANRIYGYLLDKKTKQPLFRPEVWNAVKRL
RVHIEAGCLSDPPGVPLYFEAGRDSATGGSLYRCVRGTNDLEGYHLHMRL
LIAWCISPKLAHLLLLEHNYRWNLRQAVRNRGLDSSVGGF
back to top

mRNA from alignment at L-elsbetiae_contig5792:987..1406-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5792.14213.1 ID=mRNA_L-elsbetiae_contig5792.14213.1|Name=mRNA_L-elsbetiae_contig5792.14213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=420bp|location=Sequence derived from alignment at L-elsbetiae_contig5792:987..1406- (Laminarionema elsbetiae ELsaHSoW15)
GTGTGTGCACCCCACCACAGGGTGATTCCGCCACCCGCCGTCCTTCTCAA
GCGCTTTGATATGGCCAACCGCATCTACGGCTACCTCCTGGACAAGAAAA
CGAAGCAGCCTTTGTTCCGGCCAGAAGTATGGAACGCCGTCAAACGGCTC
AGGGTCCACATCGAAGCCGGTTGCTTGAGCGACCCGCCAGGTGTGCCGCT
GTATTTCGAGGCTGGCAGGGATTCCGCGACGGGCGGCTCTCTGTATCGCT
GTGTGCGCGGCACCAACGACCTGGAGGGATATCACCTGCACATGCGTTTG
CTTATTGCGTGGTGCATTTCGCCAAAGCTAGCCCATCTCCTCCTGCTCGA
GCACAACTACAGATGGAACCTACGCCAGGCCGTCAGGAACCGCGGGCTTG
ACTCCTCCGTTGGCGGATTC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5792:987..1406-

>mRNA_L-elsbetiae_contig5792.14213.1 ID=mRNA_L-elsbetiae_contig5792.14213.1|Name=mRNA_L-elsbetiae_contig5792.14213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=840bp|location=Sequence derived from alignment at L-elsbetiae_contig5792:987..1406- (Laminarionema elsbetiae ELsaHSoW15)
GTGTGTGCACCCCACCACAGGGTGATTCCGCCACCCGCCGTCCTTCTCAA
GCGCTTTGATATGGCCAACCGCATCTACGGCTACCTCCTGGACAAGAAAA
CGAAGCAGCCTTTGTTCCGGCCAGAAGTATGGAACGCCGTCAAACGGCTC
AGGGTCCACATCGAAGCCGGTTGCTTGAGCGACCCGCCAGGTGTGCCGCT
GTATTTCGAGGCTGGCAGGGATTCCGCGACGGGCGGCTCTCTGTATCGCT
GTGTGCGCGGCACCAACGACCTGGAGGGATATCACCTGCACATGCGTTTG
CTTATTGCGTGGTGCATTTCGCCAAAGCTAGCCCATCTCCTCCTGCTCGA
GCACAACTACAGATGGAACCTACGCCAGGCCGTCAGGAACCGCGGGCTTG
ACTCCTCCGTTGGCGGATTCGTGTGTGCACCCCACCACAGGGTGATTCCG
CCACCCGCCGTCCTTCTCAAGCGCTTTGATATGGCCAACCGCATCTACGG
CTACCTCCTGGACAAGAAAACGAAGCAGCCTTTGTTCCGGCCAGAAGTAT
GGAACGCCGTCAAACGGCTCAGGGTCCACATCGAAGCCGGTTGCTTGAGC
GACCCGCCAGGTGTGCCGCTGTATTTCGAGGCTGGCAGGGATTCCGCGAC
GGGCGGCTCTCTGTATCGCTGTGTGCGCGGCACCAACGACCTGGAGGGAT
ATCACCTGCACATGCGTTTGCTTATTGCGTGGTGCATTTCGCCAAAGCTA
GCCCATCTCCTCCTGCTCGAGCACAACTACAGATGGAACCTACGCCAGGC
CGTCAGGAACCGCGGGCTTGACTCCTCCGTTGGCGGATTC
back to top