mRNA_L-elsbetiae_contig579.14210.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig579.14210.1
Unique NamemRNA_L-elsbetiae_contig579.14210.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Match: D7FN62_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN62_ECTSI)

HSP 1 Score: 1045 bits (2701), Expect = 0.000e+0
Identity = 635/1035 (61.35%), Postives = 696/1035 (67.25%), Query Frame = 1
Query:   10 GLVRELVERCLFSLPQERRDVVASSAGGSD------DVLSKGGTGN-----GDDRGFEGIPLPKCKSDKSREGAFYLLNELALGCPSNLDLTVALVGPQHYLGLTNEDGRRDR---------SSGGIGGM--STHPSADDRDGDDRQVKFRAR---TTSFGQQPHQIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLGFRDSEQTPSEDSIMWQLQNMFSHLQ-----------ESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFFQQVEGQVMGSSSENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEVKNMKTLAEALEVFTSEEVVSFKWDKEVNADTGERQAVTLSTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEGRAATAATEEVAQRHAKTGDENDDEGXXXXXXXXXXXXXXXXXXXXHLAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDTIVSTFDTEDMEAECFGGEENV--------NAHQQ--------------------WKRERTRNAFMLVYDRVMP-QPHGEPTAGDKDDASPLPPASSLPSPPVVSXXXXXXXXXXRLSPLSATPDAPAAEDNDAAGALPRPGAGGGSPAVARRDHDANVYRQERASAVRGWRRRKRFRAKVPAVFMRQIQRENLEFWRKKNVLDKLNYIFIHKLITGDQATTGKEGVSVSNSSALRLATRCTLGTLVQARERELMTHWVQLLSKSLPRSSDTCLWLLSELGRFPIILKELVLSAEESVRHAAAEIAGVALQQCMLTASGAGDGER------SEDGNDIYRSAYEAAAGEQADVNLEWQAGENLT-EGFVAVGQGDVAAETE---DDDARLARKTGLLSIWSGRQEAMAPSHRVVEESKGRTQPWPREDEKAAAASTV-VLFIRACLGLLSVAPGINHLEWARSEQLLCLLATAAESGPSGRSHLLQTGTLGALMSMCLGDDSPYPELVQSPRPRRRRVSGEDG--SSPAS 2880
            GLVRELVERCLFSLP ER     SS+ GS        +L  GG G+     GDD GFEGIPLPKCKSDKSRE AF LLNELA GC SNLDL VALVGPQH+LG  + +GRR R         SSGGIGG   S+  +A+DR                 SFGQQPH IAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVL FRD +QTP +DS+MWQLQNMFSHLQ           ESEK HFNPVGLVRSLRDWEGQ LDVMVQQDASEFITQFFQQVEGQVMGS SENILKQSFGG+YSNELLAEGG LYSERPEPFSYISVEVKNMKTLAEALEVFT+EEVVSFKWDKE+NA+TGERQAVTL+TKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFP+ELNM+PYTKEGRAAT A       H + G E    G                    HLAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDT+VSTFD EDMEAEC+GGEEN         + H Q                    W+RERTRNAFMLVYDRVMP Q  GEP                        XXXXXXXXXX                        R G G                   R + V G RRRKRFRA+VPAVFMRQI RENLEFWRKKNVLDK NY F+ KL+      T ++G S +  SALRLA R TLGTLVQA+ERE+MT W  ++ + LP   + C WLL+EL   P  +KEL+LS EESVR+AA  +A  ALQ+CM  AS             + DG+D Y +AY AA   +A    E+  G+  T EGFVA+G G+     E   D+DA LA+K GLLS+W GRQEAMAPSHRV    KG+     RE EKA       V+F+ ACLGLLSVAP INHL+W RSEQLL +LA  AE+GPS RSHLLQTG LGALMSM LGDDSPYPELV+SPRPR R V   DG  SSPAS
Sbjct: 1271 GLVRELVERCLFSLPHERGSSTVSSSSGSGVEGGGVGMLRGGGAGDVCAAVGDDDGFEGIPLPKCKSDKSREVAFILLNELATGCASNLDLAVALVGPQHFLGRNSAEGRRRRNGEQQDRFRSSGGIGGTTSSSQSAAEDRXXXXXXXXXXXXXXXAASFGQQPHHIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLDFRDHDQTPPDDSLMWQLQNMFSHLQDATRCSLLVNQESEKAHFNPVGLVRSLRDWEGQALDVMVQQDASEFITQFFQQVEGQVMGSPSENILKQSFGGLYSNELLAEGGLLYSERPEPFSYISVEVKNMKTLAEALEVFTAEEVVSFKWDKEINAETGERQAVTLNTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPIELNMYPYTKEGRAATTAAASKEGGHEEVGTE----GADAEVEKEEEPAKPEEYYHYHLAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDTVVSTFDVEDMEAECYGGEENSQHSTSYQRSQHAQQGQYSSVVNGSGXXXXXXXAWRRERTRNAFMLVYDRVMPEQQQGEPGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWKRGGKG-------------------RGAVVLGPRRRKRFRARVPAVFMRQIHRENLEFWRKKNVLDKSNYAFLQKLVF---QATDEDGASTA--SALRLACRFTLGTLVQAQEREVMTTWAGMVRQHLPLRPEACRWLLNELVGSPSTVKELLLSPEESVRYAATSVATAALQRCMQAASDXXXXXXXXXXXPAGDGDDAYTAAYAAAI--EARDRREFPGGQGGTAEGFVALGGGEGVPSAEAAGDNDAFLAQKMGLLSMWGGRQEAMAPSHRV---GKGQIGSSHRESEKAXXXXXXXVVFVDACLGLLSVAPSINHLDWVRSEQLLSILAVTAEAGPSERSHLLQTGALGALMSMFLGDDSPYPELVRSPRPRPRLVPSGDGQVSSPAS 2272          
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Match: A0A6H5KLT8_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT8_9PHAE)

HSP 1 Score: 1014 bits (2623), Expect = 0.000e+0
Identity = 633/1075 (58.88%), Postives = 691/1075 (64.28%), Query Frame = 1
Query:   10 GLVRELVERCLFSLPQERRDVVASSAGGSD------DVLSKGGTGNG-----DDRGFEGIPLPKCKSDKSREGAFYLLNELALGCPSNLDLTVALVGPQHYLGLTNEDGRRDRS---------SGGIGGM--STHPSADDRDGDDRQVKF---RARTTSFGQQPHQIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLGFRDSEQTPSEDSIMWQLQNMFSHLQESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFFQQVEGQVMGSSSENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEVKNMKTLAEALEVFTSEEVVSFKWDKEVNADTGERQAVTLSTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEGRAATAATEEVAQRHAKTGDENDDEGXXXXXXXXXXXXXXXXXXXXHLAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDTIVSTFDTEDMEAECFGGEENV--------NAHQQ--------------------WKRERTRNAFMLVYDRVMPQPHGEPTAGDKDDASPLPPASSLPSPPVVSXXXXXXXXXXRLSPLSATPDAPAAEDNDAAGALPRPGAGGGSPAVARRDHDANVYRQERASAVRGWRRRKRFRAKVPAVFMRQIQRENLEFWR-------------------------------------------------KKNVLDKLNYIFIHKLITGDQATTGKEGVSVSNSSALRLATRCTLGTLVQARERELMTHWVQLLSKSLPRSSDTCLWLLSELGRFPIILKELVLSAEESVRHAAAEIAGVALQQCMLTASGAGDGERSEDGNDI------YRSAYEAAAGEQADVNLEWQAGENLT-EGFVAVGQGDVAAETE---DDDARLARKTGLLSIWSGRQEAMAPSHRVVEESKGRTQPWPREDEKAAAASTV-VLFIRACLGLLSVAPGINHLEWARSEQLLCLLATAAESGPSGRSHLLQTGTLGALMSMCLGDDSPYPELVQSPRPRRRRVSGEDG--SSPASPRR 2889
            GLVRELVERCLFSLP ER     SS+ GS        +L  GG G+G     D   FEGIPLPKCKSDKSRE AF LLNELA GC  NLDLTVALVGPQH+LG  + +GRR R+         SGGI G   S+  +A+D             RAR  SFGQQPH IAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVL FRD +QTP +DS+MWQLQNMFSHLQESEK HFNPVGLVRSLRDWEGQ LDVMVQQDASEFITQFFQQVEGQVMGS+SENILKQ FGGVYSNELLAEGG LYSERPEPFSYISVEVKNMKTLAEALEVFT+EEVVSFKWDKE+NA+TGERQAVTL+TKKRCSIKSLPN+LLIHLKRFDFDFDTMQQTKINDRLEFP+ELNM+PYTKEGRAAT         H + G +    G                    HLAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDT+VSTFD EDMEAECFGGEEN         + H Q                    W+RERTRNAFMLVYDRVMP    E   G+                    XXXXXXXXXX                        R G G                   R   V G RRRKRFRA+VPAVFMRQI  ENLEFWR                                                 KKNVLDK NY F+ KL+      T ++GVS +  SALRLA R TLGTLVQA+ERELMT W  ++ + LP   + C WLL ELG  P  LKEL+LS EESVR+AA  +A  ALQ+CM  AS    GE              Y +AY AA   +A    E+  G+  T E FVA+G G+     E   D+DA LA+KTGLLS+W GRQEAMA SHRV    KG+     RE EKAA      V+F+ ACLGLLSVAP IN L+WARSEQLL +LA  AE+GPS RSHLLQTG LGALMSM LGDDSPYPELV+SP PR R V   DG  SSPASPRR
Sbjct:  526 GLVRELVERCLFSLPHERGSSTVSSSSGSGVEGGGVGILRGGGAGDGGAAVEDGDEFEGIPLPKCKSDKSREVAFILLNELATGCAPNLDLTVALVGPQHFLGRNSAEGRRRRNDEQQDRFRASGGIRGTTSSSQSAAEDXXXXXXXXXXXXSRARAASFGQQPHHIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLDFRDHDQTPPDDSLMWQLQNMFSHLQESEKAHFNPVGLVRSLRDWEGQALDVMVQQDASEFITQFFQQVEGQVMGSASENILKQCFGGVYSNELLAEGGLLYSERPEPFSYISVEVKNMKTLAEALEVFTAEEVVSFKWDKEINAETGERQAVTLNTKKRCSIKSLPNYLLIHLKRFDFDFDTMQQTKINDRLEFPIELNMYPYTKEGRAATTTAAGKEGGHEEVGTK----GAGAEVEKEEEPAKPEEYYHYHLAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDTVVSTFDVEDMEAECFGGEENSQHSTSYQRSHHAQQGQYSSVGNGSGSSSSPSSAWRRERTRNAFMLVYDRVMP----EQQQGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRGGKG-------------------RGGVVLGPRRRKRFRARVPAVFMRQIHWENLEFWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNVLDKSNYAFLQKLVF---QATDEDGVSTA--SALRLACRFTLGTLVQAQERELMTTWAGMVRQHLPLRPEACRWLLKELGGSPSTLKELLLSPEESVRYAATSVATAALQRCMQAASNDSGGEPGXXXXXXXXXXXAYTAAYAAAI--EARDRREFPGGQGGTAEEFVALGGGEGVPSAEAAGDNDAFLAQKTGLLSLWGGRQEAMASSHRV---GKGQIGSSHRESEKAAXXXXXXVVFVDACLGLLSVAPSINQLDWARSEQLLSILAVTAEAGPSERSHLLQTGALGALMSMFLGDDSPYPELVRSPCPRPRLVPSGDGQVSSPASPRR 1563          
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Match: I2CRD3_NANGC (Ubiquitin carboxyl-terminal hydrolase 7 n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRD3_NANGC)

HSP 1 Score: 415 bits (1066), Expect = 4.480e-123
Identity = 280/772 (36.27%), Postives = 385/772 (49.87%), Query Frame = 1
Query:    1 GGHGLVRELVERCLFSLPQERRDVVASSAGGSDDVLSKGGTGNGDDRGFEGIPLPKCKSDKSREGAFYLLNELALGCPSNLDLTVALVGPQHYLGLTNEDGRRD-------------------------RSSGGIGGMSTHPSADDRDGDDRQVKFRARTTSFGQQPHQIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLGFRDSEQTPSEDSIMWQLQNMFSHLQESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFFQQVEGQVMGSSSENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEVKNMKTLAEALEVFTSEEVVS-FKWDKEVNADTGERQAVTLSTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEGRAATAATEEVAQRHAKTGDE---NDDEGXXXXXXXXXXXXXXXXXXXXHLAGVVVHMGTANSGHYYSYIRPRDGGGE---WLEFNDTIVSTFDTEDMEAECFGGEEN--------VNAHQQWKRERTRNAFMLVYDRVMPQPHGEPTAGDKDDASPLPPASSLPSPPVVSXXXXXXXXXXRLSPLSATPDAPAAEDNDAAGALPRPGAGGGSPAVARRDHDANVYRQERASAVRGWRRRKRFRAKVPAVFMRQIQRENLEFWRKKNVLDKLNYIFIHKLITGDQATTGKE--------GVSVSNSSALRLATRCTLGTLVQARERELMTHWVQLLSKSLPRSSDTCLWLLSELG 2172
            G  GL++EL +RCLF++P    +                       R  E  P PKCK   SR  A  L+ EL+  CP NL   VA++   + LGL+ ++  R                          + SG +G                Q+   A ++S      Q    K++TG+VGLKN+GCICYMNSTLQQLF V  FREG+L F D+E+   E+S+M+QLQ +F+HLQES+K ++NP G   +L+DW+G+P DV VQQD S+F+  FFQQVEG   G+  E +L+ +FGG   +EL+AEGG  YS R EP  ++SV V+N++TL +ALE + SEE++S + W+ + +  TG+       T KR S+ +LP HL++HLKRF+FD++TMQQ KINDRLEFP++L+M+PYT EGR A         R   TG     N ++                      LAGVV+HMGTANSGHYYSYIR R  GGE   W EFNDT+V+ F+  D+E ECFGG+E          +  + W RER RNAF+LVYDR   +P        +DDA                                                               R+  A+                   R +VP   + +I RENL+FWRK N+L +  + F+ +L+      T  E        G +    S LRLAT+  LGTL +AR+ E +  WV  L K+  R    C+W++  L 
Sbjct:   55 GQGGLLQELFDRCLFAMPSTDPNTA---------------------RYIETPPPPKCKHPVSRNLALGLVLELSAECPDNLRKVVAVLERHNPLGLSADEKERXXXXXXXXXXXXXXXXXXXXXQIWGRQRSGSLGASG-------------QLALNAASSSAAASSLQCGLSKNRTGYVGLKNLGCICYMNSTLQQLFHVKGFREGILAFEDAEED-KEESLMYQLQRVFAHLQESDKAYYNPQGFCHALKDWDGEPTDVFVQQDVSDFLLMFFQQVEGMTQGTKCEEVLRHAFGGTLVHELIAEGGR-YSSRLEPCYFLSVMVQNIQTLDQALEAYISEEILSDYTWETK-DPLTGKAVKEATPTVKRASLAALPRHLILHLKRFEFDYETMQQIKINDRLEFPVDLDMYPYTLEGRTAV--------RKGGTGIAAAGNAEDSAELRERTQSAAGHPPEYYLYRLAGVVIHMGTANSGHYYSYIRER--GGERSGWFEFNDTVVTDFNPADLEVECFGGQETRGGTGGGGYHGGRNWARERIRNAFLLVYDRCDIRP--------EDDA---------------------------------------------------------------RNTVAH-------------------RPQVPTPILEEILRENLDFWRKTNILTRPYFEFMEQLLEPVYRPTAVEREEQAEDPGQAALLESGLRLATKFMLGTLTEARDWEGVRTWVPRLLKAYARCLPACMWVVGMLS 689          
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Match: A0A4D9CLS1_9STRA (USP domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLS1_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 3.050e-118
Identity = 278/763 (36.44%), Postives = 381/763 (49.93%), Query Frame = 1
Query:    1 GGHGLVRELVERCLFSLPQERRDVVASSAGGSDDVLSKGGTGNGDDRGFEGIPLPKCKSDKSREGAFYLLNELALGCPSNLDLTVALVGPQHYLGLTNEDGRRDRSS----------------GGIGGMSTHPSADDRDGDDRQVKFRARTTSFGQQPHQIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLGFRDSEQTPSEDSIMWQLQNMFSHLQESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFFQQVEGQVMGSSSENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEVKNMKTLAEALEVFTSEEVVS-FKWDKEVNADTGERQAVTLSTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEGRAATAATEEVAQRHAKTGDE---NDDEGXXXXXXXXXXXXXXXXXXXXHLAGVVVHMGTANSGHYYSYIRPRDGGGE---WLEFNDTIVSTFDTEDMEAECFGGEEN--------VNAHQQWKRERTRNAFMLVYDRVMPQPHGEPTAGDKDDASPLPPASSLPSPPVVSXXXXXXXXXXRLSPLSATPDAPAAEDNDAAGALPRPGAGGGSPAVARRDHDANVYRQERASAVRGWRRRKRFRAKVPAVFMRQIQRENLEFWRKKNVLDKLNYIFIHKLITGDQATTGKE--------GVSVSNSSALRLATRCTLGTLVQARERELMTHWVQLLSKSLPRSSDTCLWLLSELG 2172
            G  GL++EL +RCLF++P    +                       R  E  P PKCK   SR  A  L+ EL+  CP NL   VA++   + LGL+ ++  R R                    I G     S     G   Q+   A ++S      Q    K++TG+VGLKN+GCICYMNSTLQQLF V  FREG+L F D+E+   E+S+M+QLQ +F+HLQES+K +FNP G   +L++W+G+P DV VQQD S+F+  FFQQVEG   G+  E +L+ +FGG   +EL+AEGG  YS R EP  ++SV V+N++TL +ALE + SEE++S + W+ + +  TG+       T KR S+ +LP HL++HLKRF+FD++TMQQ KINDRLEFP++L+M+PYT EGR A         R   TG     N ++                      LAGVV+HMGTANSGHYYSYIR R  GGE   W EFNDT+V+ F+  D+E ECFGG+E          +  + W RER RNAF+LVYDR             +DDA                           L+ ++  P                                                        VP   + +I  ENL+FWRK N+L +  + F+ +L+      T  +        G +    S LRLAT+  LGTL +AR+ E +  WV  L K+  R    C+W++  L 
Sbjct: 2089 GQGGLLQELFDRCLFAMPSTDPNTA---------------------RYIETPPPPKCKHPVSRNLALGLVLELSAECPDNLRKVVAVLERHNPLGLSADEKERRRLKVXXXXXXXXXXXXXXXXQIWGRQRSGSL----GASGQLALNAASSSAAASSLQCGLSKNRTGYVGLKNLGCICYMNSTLQQLFHVKGFREGILAFEDAEED-KEESLMYQLQRVFAHLQESDKAYFNPQGFCHALKNWDGEPTDVFVQQDVSDFLLMFFQQVEGMTQGTKCEEVLRHAFGGTLVHELIAEGGR-YSSRLEPCYFLSVMVQNIQTLDQALEAYISEEILSDYTWETK-DPLTGKAMKEATPTVKRASLAALPRHLILHLKRFEFDYETMQQIKINDRLEFPVDLDMYPYTLEGRTAV--------RKGGTGISAAGNAEDAAELRERTQSAAGHPPEYYLYRLAGVVIHMGTANSGHYYSYIRER--GGERSGWFEFNDTVVTDFNPADLEVECFGGQETRGGTGGGGYHGGRNWARERIRNAFLLVYDRC--------DIRAEDDA---------------------------LNTVAHRPQ-------------------------------------------------------VPTPILEEILWENLDFWRKTNILTRPYFEFMEQLLEPVYRPTAVQREEQAEDPGQAALLESGLRLATKFMLGTLTEARDWEGVRTWVPRLLKAYARCLPACMWVVGMLS 2723          
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Match: A0A7S4D6W9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W9_HETAK)

HSP 1 Score: 348 bits (894), Expect = 1.600e-106
Identity = 191/383 (49.87%), Postives = 241/383 (62.92%), Query Frame = 1
Query:  445 KSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLGFRDSEQTPSEDSIMWQLQNMFSHLQESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFFQQVEGQVMGSSSENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEVKNMKTLAEALEVFTSEEVVSFKWDKEVNADTGERQAVTLSTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEGRAATAATEEVAQRHAKTGDENDDEGXXXXXXXXXXXXXXXXXXXXHLAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDTIVSTFDTEDMEAECFGGEEN----------------VNAHQQWKRERTRNAFMLVYDR 1545
            KSKTGFVGLKN+GCICYMNS+LQQ FM+PEFR  +LGF   ++ P E S+M QLQ +F+ LQESEK ++NP    R+ ++WEG+P DV+VQQDASEF+T FFQ VEG +MGS+SE +LK SFGG   NELLA+     SER EPF Y+SV+V+N KTL  AL  + + E V + W+ E   + GE +   L T+KR S+K LP HL++HLKRF+FDF+TMQQ KIN R EF ++L+M PYT EGR   +   E     A+ G  +                         L G VVH+GTANSGHYYSY+R R G   W EFNDT V  FD   +  ECFGGEE                 V+      RE+ RNAF+++YDR
Sbjct:   31 KSKTGFVGLKNLGCICYMNSSLQQFFMIPEFRRELLGFECEDEDPDE-SLMHQLQLLFAQLQESEKAYYNPAPFCRAFKNWEGEPTDVLVQQDASEFLTMFFQHVEGGIMGSASEGMLKHSFGGEICNELLAKEQGKRSERAEPFYYLSVDVRNNKTLEAALGAYVAGESVEYTWESEPEEEGGEVRKELLPTEKRASLKRLPRHLVVHLKRFEFDFETMQQAKINARFEFGMDLDMLPYTVEGREDGSGPAEGGGAAAERGPAD--------------------YYNYTLCGAVVHVGTANSGHYYSYVRER-GTDRWFEFNDTYVGDFDPAQLPDECFGGEEERFGGGAXXXXXXXXXXVSIGAGNLREKIRNAFLVIYDR 391          
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Match: K3WT18_GLOUD (USP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT18_GLOUD)

HSP 1 Score: 342 bits (877), Expect = 3.740e-95
Identity = 259/797 (32.50%), Postives = 384/797 (48.18%), Query Frame = 1
Query:   10 GLVRELVERCLFSLPQERRDVVASSAGGSDDVLSKGGTGNGDDRGFEGIPLPKCKSDKSREGAFYLLNELALGCPSNLDLTVALVGPQHYLGLTNEDGRRDRSSGGIGGMSTHPSADDRDGDDRQVKFRARTTSFGQQPHQIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLGFRDSEQTPSED------SIMWQLQNMFSHLQESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFFQQVEGQVMG----SSSENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEVKNMKTLAEALEVFTSEEVVSFKWDKEV----NADTGERQAVTLSTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEGRAATAATEEVAQRHAKTGDENDDEGXXXXXXXXXXXXXXXXXXXXH-LAGVVVHMGTANSGHYYSYIRPRDGGGE---WLEFNDTIVSTFDTEDMEAECFGGEEN--------------VNAHQQWKRERTRNAFMLVYDRVMPQPHGEPTAGDKDDASPLPPASSLPSPPVVSXXXXXXXXXXRLSPLSATPDAPAAEDNDAAGALPRPGAGGGSPAVAR----RDHDANVYRQERASAVRGWRRRKRFRAKVPAVFMRQIQRENLEFWRKKNVLDK--LNYIF--IHKLITGDQATTGKEGV------SVSNSSALRLATRCTLGTLVQARERELMTHWVQLLSKSLPRSSDTCLWLLSEL-GRFPIILKELVLSAEESVRHAAAEIAGVAL 2259
            G++ EL  RCLF+ P + +       G  D+ +S   + +        +  PKC+SD SR+ AF LL EL+    + L   +  +  QH L        R          S  P++       R++   A+  +   Q  +  K      +VGLKN+GC CYMNST+Q  FM+P FR  +L F   + + +        S++++LQ++F+HL+ + K ++NP     +L+ W+G+ +DV +QQDASEF+T FFQQ+E ++ G    S  ENIL   FGGV+SNEL+AEG   YSER EPF +ISV V++ KTL E+L+ +   E VS+ W+ +     ++D    + VTL T KR SI  LP+ L+IHLKRF+FDF+ MQQ K++DR EFP+EL+M+PYTK+G+         +  +    DE  D  XXX                 + L G VVHMGTANSGHYYS++R ++GG +   W EFNDT+VS F+ + +  ECFGGEE                +      R +TR++FML+Y R  P+    P+  D                                           + D+D++G +     G  + A+A     +      +R E+  +V         +   P      I  EN  FWRKK + D   LN+ F  I   + G  + +           + +   AL++AT+   GTL Q  +   +  W   L        D C WLLS L G   ++L  LV +    VR   A +   A+
Sbjct: 1579 GIIDELFHRCLFATPNKGQ-------GDQDETISPSQSSSSQYY----LQKPKCRSDSSRDVAFELLTELSQENTTGLRYLLEQMSRQHSL--------RAPPVPKTSVSSMAPASK------RKLGKSAKEAATRNQIQERGK------YVGLKNLGCTCYMNSTMQAFFMIPRFRRQILRFNAEQNSGTSTASGEGKSVLYELQSLFAHLEGTAKSYYNPRPFTSALKTWDGESIDVNLQQDASEFLTSFFQQIESEMNGMGDGSGDENILNTFFGGVFSNELVAEGDR-YSERAEPFHFISVPVRDRKTLKESLDGWVEGEKVSYTWEAKAENGQDSDGAAGEKVTLDTHKRISISKLPDQLIIHLKRFEFDFERMQQIKLHDRFEFPMELDMYPYTKQGQEEKRKRSSSSASNTGASDEASDXXXXXSKSSARDGRSTAPEYSQYELVGTVVHMGTANSGHYYSFLREQNGGNDYNQWYEFNDTVVSAFNPQQIPDECFGGEETRRLGVSRTSSASSAASVSSSPTRMKTRSSFMLIYARKQPKLQLVPSLSD------------------------------------------VSRDSDSSGQISNYSTGFAAAALALTFCGKLKQKARFRLEKLRSVA--------QVIAPEPIRNLIAMENRLFWRKKYLYDSRCLNFTFDVIKSCLVGSNSGSNSTSELPRFEPTEARLEALQMATKFVFGTLWQGGDVAKVLKWKPALLALYHTEFDGCYWLLSTLRGNEQLLLDLLVFNEHTEVRELLASVLSEAI 2293          
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Match: A0A836CHU2_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHU2_9STRA)

HSP 1 Score: 313 bits (803), Expect = 4.760e-95
Identity = 194/346 (56.07%), Postives = 232/346 (67.05%), Query Frame = 1
Query:  496 MNSTLQQLFMVPEFREGVLGFRDSEQT----PSEDSIMWQLQNMFSHLQESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFFQQVEGQVMGSSSENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEVKNMKTLAEALEVFTSEEVVSFKWDKEVNADTGERQAVTLSTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEG---RAATAATEEVAQRHAKTGDENDDEGXXXXXXXXXXXXXXXXXXXX--------------HLAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDTIVSTFDTEDMEAECFGG 1470
            MN+TLQQ FMVP FR  VLGF   E        ED+ MWQLQ++F+HLQESEK H+NP+G  ++LRDWEG+P+DV++QQDASEF+    QQ+EG+VMG+ +E  L+++FGGV+SNELLA+GG   SERPEPFSY+SV VK+ +TLA AL  F + E V ++W +          A TL T KR +I+ LP HLLIHLKRF+FDF TMQQ KINDR EFPLEL+M PYT E    R A AA                   XXXXXXXXXXXXXXXXXX                 LAGVVVHMGTANSGHYYS+IR R G   W EFND +V+  D  D+E ECFGG
Sbjct:    1 MNATLQQFFMVPRFRAAVLGFDGGEAALPPAQREDAFMWQLQSLFAHLQESEKAHYNPLGFCQALRDWEGEPVDVLMQQDASEFVAMLLQQLEGRVMGTPAEAPLREAFGGVFSNELLAQGGRR-SERPEPFSYVSVGVKDTRTLAGALRAFVAGETVEYRWGEGA-------AAATLPTLKRLAIRELPPHLLIHLKRFEFDFATMQQVKINDRFEFPLELDMRPYTTEALAERDAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKESDETPKRPDSYYRYQLAGVVVHMGTANSGHYYSFIRERCGARRWFEFNDNLVTEMDPADLETECFGG 338          
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Match: A0A5D6XY90_9STRA (USP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY90_9STRA)

HSP 1 Score: 335 bits (859), Expect = 8.950e-93
Identity = 280/826 (33.90%), Postives = 386/826 (46.73%), Query Frame = 1
Query:   10 GLVRELVERCLFSLPQERRDVVASSAGGSDDVLSKGGTGNGDDRGFEGIPLPKCKSDKSREGAFYLLNELALGCPSNLDLTVALVGPQHYLGLTNEDGRRDRSSGGIGGMSTHP--SADDRDGDDRQVKFRARTTSFGQQPHQIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLGFRDSEQTPSEDS----------IMWQLQNMFSHLQESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFFQQVEGQVMGSSS----ENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEVKNMKTLAEALEVFTSEEVVSFKWDKEVNADTGER----------------QAVTLSTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEGR---------AATAATEEVAQRHAKTGDENDDEGXXXXXXXXXXXXXXXXXXXXHLAGVVVHMGTANSGHYYSYIRPRD----GGGEWLEFNDTIVSTFDTEDMEAECFGGEENVNA-----------------HQQWKRERTRNAFMLVYDRVMP-----QPHGEPTAGDKDDASPLPPASSLPSPPVVSXXXXXXXXXXRLSPLSATPDAPAAEDNDAAGALPRPGAGGGSPAVARRDHDANVYRQERASAVRGWRRRKRFRAKVPAVFMRQIQRENLEFWRKKNVLDKLNYIFIHKLI--------TGDQATTGKEGVSVSNSSALRLATRCTLGTLVQARERELMTHWVQLLSKSLPRSSDTCLWLLSEL-GRFPIILKELVLSAEESVRHAAAEIAGVAL 2259
            G+V E+  +CLF+  +  R     +   S                   +  PKC+S+ SR+ AF LL EL+   PS L   +A +  QH L        +  S+G     +T P  SA  R    + VK      +   QP + AK      +VGLKN+GC CY+NST+Q  FM+P FR  +L F  +   PSE S          ++++LQ++F+HL+ S K ++NP     +L+ W+G+ +DV +QQDASEF+T FFQQ+E ++ G  S    EN+L   FGGV+SNEL+A+GG  YSER EPF +ISV V++ K L E+L+ +   E VS+ W+K  +                      + VTL T KR SI  LP+ L+IHLKRF+FDF+ MQQ K++DR EFP+ L+M+PYTK G+         A++ AT++V    A            XXXXX              L G VVHMGTANSGHYYS++R +D        W EFNDTIV+ FD + +  ECFGGE+++                        R +TR++FML Y R  P     +P   PT+G  +                 SXXXXXXXXXX    LS+   A           L R  +G                R E   +V         +   P      I  EN  FWRKK + D     F H +I         GD ++        +  +AL+LAT+   GTL Q      +  W   L        D C WLL  L     ++L  LV S    VR   A +   A+
Sbjct: 1873 GIVEEIFHKCLFATAESARHAPEDAQAPSSQYY---------------LQKPKCRSESSRDVAFALLRELSRENPSGLRYLLAQLSSQHAL--------KAPSAGPSALATTEPPLSASKR----KSVKAAKDVAAMRLQPLERAK------YVGLKNLGCTCYLNSTIQSFFMIPRFRRQILRFHAAAAAPSESSASSSGDASTSVLYELQSLFAHLEGSAKPYYNPKPFTAALKTWDGESIDVNLQQDASEFLTSFFQQIESEMNGVRSGHGDENLLTTFFGGVFSNELVADGGR-YSERAEPFHFISVPVRDRKNLKESLDAWVEGETVSYTWEKGSSXXXXXXXXXXXXXXXXXAPSADEKVTLDTHKRISIAKLPDQLIIHLKRFEFDFERMQQMKLHDRFEFPMALDMYPYTKAGQEEKRRRARSASSGATDDVTAADAPRSS-------AXXXXXSAARTTAPEYSQYELVGTVVHMGTANSGHYYSFLREQDTADSASRHWFEFNDTIVTPFDPQQIPDECFGGEDDLRRGFGLGRASSSSSLXXXXSASPARMKTRSSFMLFYARKKPTLQLVRPPPSPTSGRPEAGG--------------SXXXXXXXXXXXXXALSSIAFATCGFVATFCAKLKRAASG----------------RLESLRSVA--------QVIAPEPIRNLIAMENQLFWRKKYLYDARCLRFTHDIIQLCVAGVDVGDSSSRAVAAPPEARLTALQLATKFVFGTLWQTGSVTTVAAWKPALLALYRTDVDGCYWLLRTLRANEQLLLDLLVFSEHADVRELLASVLSEAI 2619          
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Match: A0A2D4BP21_PYTIN (Ubiquitin-specific protease, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP21_PYTIN)

HSP 1 Score: 309 bits (791), Expect = 6.780e-92
Identity = 180/412 (43.69%), Postives = 251/412 (60.92%), Query Frame = 1
Query:  388 KFRARTTSFGQQPHQIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLGFRDSEQTPSEDSIMWQLQNMFSHLQESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFFQQVEGQVMGSSS-----ENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEVKNMKTLAEALEVFTSEEVVSFKWDKEVNADTGERQA----VTLSTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEGRAATAATEEVAQRHAKTGDENDDEGXXXXXXXXXXXXXXXXXXXXHLAGVVVHMGTANSGHYYSYIRPR----DGGGEWLEFNDTIVSTFDTEDMEAECFGGEENVNAHQ---------QWKRERTRNAFMLVYDRVMPQ 1557
            K R+++    Q P Q      +  +VGLKN+GC CYMNSTLQ  FM+P FR  +L F   E       +++QLQ++F+HL+ S K ++NP  L  +++ WEG+ +DV  QQDASEF+T FFQQ+E ++ GSSS     E++L   FGGV+SNEL+AEG   YSER EPF +ISV V++ KTL E+L+ +   + VS+ W+ + ++D  E+ A    VTL T KR SI +LP+ L+IHLKRF+FDF+ MQQ K++DR EFP+EL+M  YTKEG+A         Q   +   END  G                     L G VVHMG+A+SGHYYSY+R +    D   +W EFNDT VS FD +++  ECFGG +  ++ +            R + R++FML+Y RV P+
Sbjct:   27 KKRSKSKDLLQVPSQ-----DRGKYVGLKNLGCTCYMNSTLQAFFMMPLFRRQILRFPSKE-----GGVLFQLQSVFAHLEGSAKPYYNPKALTSTMKTWEGEAVDVNQQQDASEFLTSFFQQLESEMNGSSSGILGDESVLNTFFGGVFSNELVAEGDR-YSERFEPFHFISVPVRDRKTLTESLDSWVEGDKVSYTWESKSSSDDSEQDAQPEKVTLETHKRISIHTLPDKLIIHLKRFEFDFEAMQQIKLHDRFEFPMELDMFRYTKEGQA---------QLRRRATSEND--GEPLASSSLSDRSRAPEHYLYELVGTVVHMGSAHSGHYYSYLREQEVEDDAVPQWYEFNDTDVSLFDAKNIPEECFGGNDEGDSRRGSSSLGRSGYGARRKNRSSFMLIYSRVRPK 416          
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Match: A0A7S1UJ59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ59_9STRA)

HSP 1 Score: 304 bits (778), Expect = 3.320e-90
Identity = 164/358 (45.81%), Postives = 224/358 (62.57%), Query Frame = 1
Query:  445 KSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLGFRDSE------QTPSEDSIMWQLQNMFSHLQESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFFQQVEGQVMGSSSENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEVKNMKTLAEALEVFTSEEVVSFKWDKEVN-ADTGERQAV---TLSTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEGRAATAATEEVAQRHAKTGDENDDEGXXXXXXXXXXXXXXXXXXXXH-LAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDTIVSTFDTEDMEAECFGGEENVN 1485
            KS TG+VGL N+GC CY+NS LQQLFM+P FR  VL F D        +  +ED +++QLQNMF+HLQ SEK  +NP     + RDW+  P+DV+VQQDASEF +    ++EG++MG+  EN+L+ +  G  S ELLA+    Y  R + F  I V ++N+++L E++  F   E V + W++E   AD    + V   TL+T KR S+K LP HL+IHLKRFDFD++T QQ K+ND  EFP +++M  +T++GRA     ++  +     GD++  EG                    + L G+V+HMGTANSGHYYSYIR RD   +W EFNDT V  FD +D+ AECFGGEE VN
Sbjct:   53 KSSTGYVGLTNLGCTCYLNSILQQLFMMPTFRRAVLEFEDXXXXXXXXEDAAED-LIFQLQNMFAHLQNSEKASYNPRAFTNAFRDWDNMPIDVLVQQDASEFFSNLLTKLEGKLMGTEFENLLRDTVQGTVSQELLAQPEK-YRAREDVFYLIEVPIQNLRSLEESMHKFIEGETVEYTWEEESGEADENGEKVVRKETLNTTKRLSLKKLPPHLVIHLKRFDFDYETFQQVKLNDYFEFPTDMDMREFTQDGRADATPLDQRGK-----GDKDGGEGEGGAGSDAEEYAALPDDYFQYELTGIVIHMGTANSGHYYSYIRERDSDNKWFEFNDTYVGEFDPDDIPAECFGGEEEVN 403          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig579.14210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN62_ECTSI0.000e+061.35USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KLT8_9PHAE0.000e+058.88USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
I2CRD3_NANGC4.480e-12336.27Ubiquitin carboxyl-terminal hydrolase 7 n=2 Tax=Na... [more]
A0A4D9CLS1_9STRA3.050e-11836.44USP domain-containing protein n=5 Tax=Monodopsidac... [more]
A0A7S4D6W9_HETAK1.600e-10649.87Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
K3WT18_GLOUD3.740e-9532.50USP domain-containing protein n=1 Tax=Globisporang... [more]
A0A836CHU2_9STRA4.760e-9556.07USP domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A5D6XY90_9STRA8.950e-9333.90USP domain-containing protein n=1 Tax=Pythium bras... [more]
A0A2D4BP21_PYTIN6.780e-9243.69Ubiquitin-specific protease, putative n=1 Tax=Pyth... [more]
A0A7S1UJ59_9STRA3.320e-9045.81Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig579contigL-elsbetiae_contig579:26654..35068 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1052.7
Seed ortholog evalue1e-304
Seed eggNOG ortholog2880.D7FN62
KEGG koko:K11840,ko:K11869
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsCOG5077@1,KOG1866@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons16
Model size2949
Cds size2946
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig579.14210.1prot_L-elsbetiae_contig579.14210.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig579 26655..35068 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816621.49824-CDS-L-elsbetiae_contig579:26654..269451622816621.49824-CDS-L-elsbetiae_contig579:26654..26945Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 26655..26945 -
1691683691.101135-CDS-L-elsbetiae_contig579:26654..269451691683691.101135-CDS-L-elsbetiae_contig579:26654..26945Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 26655..26945 -
1622816621.5102718-CDS-L-elsbetiae_contig579:27102..272761622816621.5102718-CDS-L-elsbetiae_contig579:27102..27276Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 27103..27276 -
1691683691.1148033-CDS-L-elsbetiae_contig579:27102..272761691683691.1148033-CDS-L-elsbetiae_contig579:27102..27276Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 27103..27276 -
1622816621.523851-CDS-L-elsbetiae_contig579:27594..280271622816621.523851-CDS-L-elsbetiae_contig579:27594..28027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 27595..28027 -
1691683691.128627-CDS-L-elsbetiae_contig579:27594..280271691683691.128627-CDS-L-elsbetiae_contig579:27594..28027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 27595..28027 -
1622816621.5342684-CDS-L-elsbetiae_contig579:28296..284221622816621.5342684-CDS-L-elsbetiae_contig579:28296..28422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 28297..28422 -
1691683691.1380944-CDS-L-elsbetiae_contig579:28296..284221691683691.1380944-CDS-L-elsbetiae_contig579:28296..28422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 28297..28422 -
1622816621.5452263-CDS-L-elsbetiae_contig579:28723..292021622816621.5452263-CDS-L-elsbetiae_contig579:28723..29202Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 28724..29202 -
1691683691.1494243-CDS-L-elsbetiae_contig579:28723..292021691683691.1494243-CDS-L-elsbetiae_contig579:28723..29202Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 28724..29202 -
1622816621.5557325-CDS-L-elsbetiae_contig579:29687..298821622816621.5557325-CDS-L-elsbetiae_contig579:29687..29882Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 29688..29882 -
1691683691.1610332-CDS-L-elsbetiae_contig579:29687..298821691683691.1610332-CDS-L-elsbetiae_contig579:29687..29882Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 29688..29882 -
1622816621.5689762-CDS-L-elsbetiae_contig579:30090..302221622816621.5689762-CDS-L-elsbetiae_contig579:30090..30222Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 30091..30222 -
1691683691.1763074-CDS-L-elsbetiae_contig579:30090..302221691683691.1763074-CDS-L-elsbetiae_contig579:30090..30222Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 30091..30222 -
1622816621.5805836-CDS-L-elsbetiae_contig579:30392..305141622816621.5805836-CDS-L-elsbetiae_contig579:30392..30514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 30393..30514 -
1691683691.191296-CDS-L-elsbetiae_contig579:30392..305141691683691.191296-CDS-L-elsbetiae_contig579:30392..30514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 30393..30514 -
1622816621.5920398-CDS-L-elsbetiae_contig579:31263..313601622816621.5920398-CDS-L-elsbetiae_contig579:31263..31360Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 31264..31360 -
1691683691.2011971-CDS-L-elsbetiae_contig579:31263..313601691683691.2011971-CDS-L-elsbetiae_contig579:31263..31360Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 31264..31360 -
1622816621.6028893-CDS-L-elsbetiae_contig579:31761..319021622816621.6028893-CDS-L-elsbetiae_contig579:31761..31902Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 31762..31902 -
1691683691.2158346-CDS-L-elsbetiae_contig579:31761..319021691683691.2158346-CDS-L-elsbetiae_contig579:31761..31902Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 31762..31902 -
1622816621.6148913-CDS-L-elsbetiae_contig579:32244..323701622816621.6148913-CDS-L-elsbetiae_contig579:32244..32370Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 32245..32370 -
1691683691.2249775-CDS-L-elsbetiae_contig579:32244..323701691683691.2249775-CDS-L-elsbetiae_contig579:32244..32370Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 32245..32370 -
1622816621.624445-CDS-L-elsbetiae_contig579:33280..333941622816621.624445-CDS-L-elsbetiae_contig579:33280..33394Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 33281..33394 -
1691683691.2426977-CDS-L-elsbetiae_contig579:33280..333941691683691.2426977-CDS-L-elsbetiae_contig579:33280..33394Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 33281..33394 -
1622816621.634301-CDS-L-elsbetiae_contig579:33770..339721622816621.634301-CDS-L-elsbetiae_contig579:33770..33972Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 33771..33972 -
1691683691.2619379-CDS-L-elsbetiae_contig579:33770..339721691683691.2619379-CDS-L-elsbetiae_contig579:33770..33972Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 33771..33972 -
1622816621.6449683-CDS-L-elsbetiae_contig579:34213..342781622816621.6449683-CDS-L-elsbetiae_contig579:34213..34278Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 34214..34278 -
1691683691.2758121-CDS-L-elsbetiae_contig579:34213..342781691683691.2758121-CDS-L-elsbetiae_contig579:34213..34278Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 34214..34278 -
1622816621.6568582-CDS-L-elsbetiae_contig579:34544..346491622816621.6568582-CDS-L-elsbetiae_contig579:34544..34649Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 34545..34649 -
1691683691.2883282-CDS-L-elsbetiae_contig579:34544..346491691683691.2883282-CDS-L-elsbetiae_contig579:34544..34649Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 34545..34649 -
1622816621.6731458-CDS-L-elsbetiae_contig579:34924..350681622816621.6731458-CDS-L-elsbetiae_contig579:34924..35068Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 34925..35068 -
1691683691.3004549-CDS-L-elsbetiae_contig579:34924..350681691683691.3004549-CDS-L-elsbetiae_contig579:34924..35068Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig579 34925..35068 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig579.14210.1

>prot_L-elsbetiae_contig579.14210.1 ID=prot_L-elsbetiae_contig579.14210.1|Name=mRNA_L-elsbetiae_contig579.14210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=982bp
GGHGLVRELVERCLFSLPQERRDVVASSAGGSDDVLSKGGTGNGDDRGFE
GIPLPKCKSDKSREGAFYLLNELALGCPSNLDLTVALVGPQHYLGLTNED
GRRDRSSGGIGGMSTHPSADDRDGDDRQVKFRARTTSFGQQPHQIAKHKS
KTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLGFRDSEQTPSEDSIMW
QLQNMFSHLQESEKVHFNPVGLVRSLRDWEGQPLDVMVQQDASEFITQFF
QQVEGQVMGSSSENILKQSFGGVYSNELLAEGGSLYSERPEPFSYISVEV
KNMKTLAEALEVFTSEEVVSFKWDKEVNADTGERQAVTLSTKKRCSIKSL
PNHLLIHLKRFDFDFDTMQQTKINDRLEFPLELNMHPYTKEGRAATAATE
EVAQRHAKTGDENDDEGKGSGGDEKEKESKPEEYYHYHLAGVVVHMGTAN
SGHYYSYIRPRDGGGEWLEFNDTIVSTFDTEDMEAECFGGEENVNAHQQW
KRERTRNAFMLVYDRVMPQPHGEPTAGDKDDASPLPPASSLPSPPVVSPA
SPSASLPSRLSPLSATPDAPAAEDNDAAGALPRPGAGGGSPAVARRDHDA
NVYRQERASAVRGWRRRKRFRAKVPAVFMRQIQRENLEFWRKKNVLDKLN
YIFIHKLITGDQATTGKEGVSVSNSSALRLATRCTLGTLVQARERELMTH
WVQLLSKSLPRSSDTCLWLLSELGRFPIILKELVLSAEESVRHAAAEIAG
VALQQCMLTASGAGDGERSEDGNDIYRSAYEAAAGEQADVNLEWQAGENL
TEGFVAVGQGDVAAETEDDDARLARKTGLLSIWSGRQEAMAPSHRVVEES
KGRTQPWPREDEKAAAASTVVLFIRACLGLLSVAPGINHLEWARSEQLLC
LLATAAESGPSGRSHLLQTGTLGALMSMCLGDDSPYPELVQSPRPRRRRV
SGEDGSSPASPRRTYRSSFSPVADAAGSGETG
back to top

mRNA from alignment at L-elsbetiae_contig579:26654..35068-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig579.14210.1 ID=mRNA_L-elsbetiae_contig579.14210.1|Name=mRNA_L-elsbetiae_contig579.14210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8415bp|location=Sequence derived from alignment at L-elsbetiae_contig579:26654..35068- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGGCATGGTTTGGTTAGGGAGCTGGTGGAGCGTTGTCTGTTCTCGCT TCCACAGGAAAGGCGGGATGTTGTCGCTTCTTCTGCGGGTGGCAGTGATG ATGTGCTCAGCAAAGGAGGGACGGGAAATGGCGACGATCGCGGGGTGAGA GCTGTCTTGTGCCCTCTTCAAATATGTGTCCGTGTTTATTTCTCCAGTTG GAACAGAAGGGATAAATAGCTGCAAGCCATATTTTTACCTCTGCTCCGAC AGATGTGTGTTGTTGGAAGCGGACAGATAGCTGCTACCGGTATATCTTGA TGCAGCACGCCAGACGCGAACTACATTACAGTATACCATCGCCCCCTTAC TTCTTCCCCTCCCCTGCCCTCTTGTTCTGCTGCTCCGTCTTCGTTTGCTA TTTCGCGTTTCCTTTGAAGTTCGAGGGGATACCCTTGCCCAAGTGCAAGA GCGACAAGAGCCGCGAAGGGGCGTTCTACCTGCTCAACGAGCTAGCCTTA GGCTGCCCTTCCAACCTCGATCTCGTGAGAAACCGAAGAGAGGGTGTTGA AATTGAACGGTAGCCATATCGCGTACTTTTCTCTCTATGGTACCGAGCAC CAATCGCATTCCGTGCGTAGAAACACGAGAAAGAGCCTGGCTCTGGCTCT CGCGCTTTTTCATGTCCGAGCGCGGCCGTACCTGGCCCATGCCGCGGAAC CTTGCGCAATTACGTGTTTTTAACTACTACCTGGTACATAACTGCGTTTT TCGCCTGCTGGTCGTTTCTTGGCCACGGCATGACGTACAGACGGTGGCGC TGGTGGGACCTCAGCACTATCTTGGACTTACGAACGAGGATGGCCGGAGG GACAGGTAACTATCTACATTATAAAGCCTCAAGAGTCGCACGTGCTTGTA GCGTTTAGACTGGTGTTAACTCGGAACATGGATTATTTACCGCTTTATCG CGACCCTTCGTCGAGCGTTGAAATCGCACGTCGACGGTTTAGATCGTGCA TGTACCGTCAATCTCCTTTTTTTTTCAAACCCCATGCGTCACCGTCTCGA TTTTTCATGCACCACCAAAACTTGCCTGTATTTTCCCACGGTTTAGATCG TCTGGGGGCATCGGAGGGATGTCGACGCATCCATCTGCGGACGACAGGGA TGGGGATGATAGGCAGGTCAAGTTTAGAGCAAGGACGACATCTTTCGGGC AGCAGCCGCACCAGATAGCCAAGCACAAGAGCAAGACCGGCTTTGTCGGC CTAAAAAACATGGGCTGCATCTGCTACATGAACAGCACTCTGCAGCAGGT AAATTTGAGGTTTTCCTTTTGTGAAAAACGTTTGTGGTGTGCGTTGCGAT GAGTGAGTGTTACGTAGCTTTCTGTTGTGTTGTAGTAGTCGCTTTCTACG GTAAAACGTTTGTTTGGATTCCGTCCGTTTTGTTCTGCATGAAGCCAGCA GCATTTTGGAACGGGATGTAGACGGTGTACAAGACTAAAAAAGATGTGTA ACGCGCCCATGACTGAGTGGGGTTCGCGGGCAGACAGGCCGACTGTTCTA CACTCGTTTGTTTTCACCAGTTTCAAACACGCATTGACCATCATTTCATC TTGGTGTGTACTTGTGTGCTGTTTTGACCGATTGACCTTGTCGCCTGTGC AAAACCTACCGTGTGGTGCTTCAGCTATTCATGGTTCCGGAGTTCCGAGA AGGCGTGCTCGGCTTCCGAGACAGCGAACAGACACCATCTGAAGACAGCA TCATGTGGCAGTTACAGAACATGTTCAGCCACCTACAGGTGCGAGCGAGA CCAGAAGCAGCACTAAATATGCACCGCAGTGGCTATTGTCGTGTAGAATG CATTTCGTTGGGTGTCATGCAAACAACAACAGCAGTGTCGCAAGAGTGCC GCACGTGGAGGTATTGTACTTACACTCAACCCCCCATGCTGTTTCGAATA CAAGCCGCACTGTGCGGAAACACTATTACCGTAGGTGACACAAGATACCA CACCCCCTGGACCGACTTTTAGAGCTCCATTACTCCGTAACGAAGAGGGC GCCAGCACCAATTGACACATTTTTGAACAGCCCTCCACTAGATCTTTCCA ACGCCACCCCCTTTCGGCACTGGCACTCATCTTGCTGGGAAGCAACCGAG CTTTGAAAATCTGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTATC CAGCTCTGTTTATTGTTGGCAGGCCGCCACCATTCACGTGAAGCCCGCCT ACCTCCCACCCCCCCCCCAAGCCATTGTTTGTCTCTTTCTGCCCCCCCCC CCCTAACGAGGATGATCCTAACACGCAATGTTGAAATGGCAAGGCACCCA CTAGGCACGGCAGCCCATGGCAGTCGCCGCAAGTGACCATGAAGTGTGCA ATACATCCTCGTACGGTCGTGAGCGAATACTCGTAGCAGGATGCGGTCGC CCTCAAGTGCAGTCACCGAACAAACATCACGGCGCTTCGCGCTTGGTAAA CGCCTTGTCGAGTCTTGTTCGGCGAAAACCCACCGTGCTCTGCCCCTCGA GGCTTTGCAGGGATGCAAGGTCTATGGTATAGCAGTGTCGGCATGACGAT CACTGAGTAAGCCTCCTCTACCAATGACGATGGCGACACACGTCGTGACG AGTAACGCCATCCTCGGTGACACTGCCTGCATCATCATCGACAAACAGGA GTCGGAAAAGGTCCACTTCAACCCGGTGGGACTAGTGCGCTCGCTTCGAG ACTGGGAGGGGCAGCCTCTGGATGTGATGGTACAGCAAGACGCCTCGGAG TTCATCACTCAGTTCTTTCAGCAGGTACTATAACCCTGAGGCCCCGACTG TTTTAGTGTAGCACTGCTGTGCCATGAGTGTGGTAGGATGATGGGTCCAC TACTTGTAGCGCGGCGCAGGACAAAGCCACAACCCCGTGTTGAGATGTTT GCGGCACTCGTGTCTAGGAAAGATGGAAACCGTCCCCCTCGACTGGACTA CTAGAACCATCCCACTGGAGGACTAGACTGCGTGGCTGGGGAAGTTGGTG CTACCACGCCGTACGCAGGCCTTTTTCTGTTCGCAAACTGCTGAGTTGCT GACGTTTACCCTCTTAATCATGATCTCTTGCTGTTCCCGCGCCCCCGTCT TGCTGGCTCAATGAAGGTGGAAGGGCAAGTGATGGGGTCCTCCAGCGAGA ACATTCTCAAGCAGTCGTTCGGCGGTGTTTACAGCAATGAGCTGCTCGCA GAGGGCGGAAGCCTTTACAGCGAACGCCCAGAGCCCTTCTCCTACATTTC CGTAGAGGTAGGTTTGTTCCTCTGCACGGATGTTCTGTGGTGTTGTTCGT GCGGTGGCCGAGAGAACTAGACAGTGCAGGCGCGCGGACCAATCAGGTTC TGATCCTGCTTTTTGCTTTTTGGCTTTCGGGTCCTACTACCCTCTCGCGC GCGCGTGCGCTTGTTTTAGTTGGAGCGAAGACGGCGGCGGCAAATATATT GATGTATTGATGTATTGATGTATTGATGTAGCATAGGCTTCCTGCAGCAG GGCCCCCCAACTCGAAAAAGTGGCTACTGTGGGGGATTTTTTCTCTACAT ATGTCCTAGATAATACCCCCCCCCGCTGCCCCCACAGCTCTTTTTGAGAA TTGGGAGCCAGCTCTATTGCAGGAAGCCTATGCCGATCCTCTGCCCGTCG TCTTCCAGGTGAAAAATATGAAGACACTGGCCGAGGCTCTGGAAGTTTTC ACCTCAGAGGAGGTGGTGAGCTTCAAGTGGGACAAGGAAGTCAATGCCGA CACAGGTAAGCGCGCTCAATAGAAAGGCTGCCCAGCTATGCATATACACG CCTATTTGAACCATTTAAGGCACTGGCTGGCCCGGGCAGGGAAGCGGAAG AGGATGTCCAGCTGTTGATACCAAGGCATTGTAGGCGGGTGTGGGAAGCC TCGGCTTTCGATTGTAGCTCTCTTTCCTCTAATATACCTGGCGTGGTATC TGGGGTTTCTAGCTTTATTTTATTTTATTTCATTTTATTTTATTTTCCGA GTGGTATTTACCCAACAGTACCTTCTGAATTGTTTTTAGTGCCCGCGAGA CGCAAGACCCCTCCGGGAGTTTCAGTTTAGTATCGCCTGGCGCGTATCTA ACGTAGTTTTTATTACATTGTTTTCGGCGGCGTCGAGTGTGCCCTGTTTT GTGACCACGGGCCCCCAAGATGTTTTTGGACTAAAGAGCTAATGTGAGAA ACAACAACAACAACAACAACCAATGCGTTTGAAGCCAATTCGAGCCAACC CATAGGCCGCGCTGGCGGTCAAGACGTGCAATGTGCTTTGACGGGGAGGG TGTTTCGACTCCAACCGGCCAGCCAGCCGGCCGTCTTGCGTGGGTGCTGT TGCGTACCTTTGCCCGTCATGTCTCGATACATAAATGCTCCAAGATGATA TATCACCTTGAAGAGCCACATGAAGCGAGCGAGCCACCTACCTGCCCCCT CCACCCACCGTCTTTCCCTCGCTACGCGGAAACATTGAAATGGTGAATAC AAAGGCGAGCGCCAGGCGGTGACTCTGAGCACGAAAAAGAGGTGCTCCAT CAAGTCCCTCCCGAACCACCTCCTGATACACCTCAAGCGCTTCGACTTCG ATTTCGACACCATGCAGCAGACTAAGGTGATGGTGTGGATGATGATGAGT GCTGTAAATGTGGCCTTTTCAGTATTTTTTCAGCGAGCTTACTTGCGCAT GAGGCGAGCACGTTGGCCGTGGAAAATGCCGGTATGCCACCTCCCCTACA CCACCTGGCAGCAAACCAAAAACATATTGTGCCTGCTTTCTCGCAGATCA ACGACCGCTTGGAGTTTCCGCTAGAGCTGAACATGCACCCTTACACCAAG GAGGGACGTGCTGCAACCGCCGCCACCGAAGAGGTGGCTCAACGACATGC CAAAACCGGGGATGAGAACGATGATGAGGTGAGCGTTTGGCCTTTTGTCT TACCGTAACATCAGTGACATCAGTGGTAGGGGTAGCCGCGGTCCCTGCGT CTTTGATGTTATGCGGTGGCTGCTCCTGTGAAAATCATTGTTTTCGTGGC TGCAAGAGCGCTCGTCGGTGGTGGTGCTTTGTGTTCTTGACGCATATTGG CCGTGCTGGTGCAACCGCGACGTGTAATGTGTTCAGGGGAAGGGTAGCGG CGGTGACGAGAAGGAGAAGGAAAGCAAGCCGGAAGAGTATTATCACTACC ATCTTGCAGGAGTGGTGGTGCACATGGGTACCGCCAACTCTGGGCACTAC TACAGCTACATCCGCCCCCGGGATGGCGGCGGCGAGTGGTTGGAGTTTAA CGACACTATCGTGTCCACCTTCGATACGGAGGTAAGTTCGATGGTTGATT TATGTAGCCAAGGGTGTTTTGTGTTGAGTTGTTTCACACTGAAGTTCAGC ACGATTCTTGAACGATATGTATAGCCTACCATCCCCAACACCGGTGCGTG TGGAGGTACCACCGGTTTGCAGTATGAGCTGACTGAACATGGACATGGAC AATGCATGTGAAATGGAACACGAGCATAGACTGTGGACAAACTTGACTCC CCCTCAAACAAGAACATGGTTTTACGTTTTACAGCACAAAAAAGACTAAA GCGGACTGCTTGAGCCAAGTGGGCAACGAGTCAAGCGTGTACGGTTTCCG ATCGCCCGCACTCATGTCGCATGCTGAGCCTTTCCTCCTCGCCACGTAAA ACCCCGCGTCTGAGCTCAAGCAGCAGCCACAGTATTACTATGATATGTAT AAGACCCCAACCCCTTCACTTGGCACCCACCCCACCCCCATCCCACTACA CCTCACCCTACTCCAGGACATGGAAGCGGAGTGTTTCGGTGGCGAGGAAA ATGTAAATGCTCACCAGCAGTGGAAGCGCGAGAGGACCCGAAATGCTTTC ATGCTGGTTTACGACAGGGTCATGCCGCAACCGCATGGCGAGCCGACGGC GGGGGACAAGGATGACGCTTCCCCGCTTCCTCCTGCCTCTTCTCTGCCGT CGCCGCCGGTTGTGTCGCCTGCTTCGCCCTCTGCGTCCCTTCCGTCCCGG CTGTCCCCGCTCTCTGCCACCCCTGATGCTCCTGCTGCGGAGGACAATGA CGCGGCTGGTGCTTTGCCGAGACCGGGAGCGGGCGGTGGTTCGCCGGCCG TAGCGCGACGTGACCACGACGCCAACGTGTACAGGCAGGAGAGGGCAAGT GCGGTTCGAGGGTGGCGGCGAAGAAAGAGGTTCAGAGCGAAAGTTCCCGC CGTGTTCATGCGCCAGATACAACGGGAGAACCTGGAGTTTTGGAGGTTCG GCTGCGTGTTGTCTTTCGTGCGATCGCTACCCGCTTGGTTCCGTGAAGGC TGTGCCGTCGTACTCCCTTCTCCTCCTCGAGGATCTCTTCATCCGTTGCC AGAAACCGAGTGTTTAAAGACATCTAAACTACTCGTGGTACAGACGCATA TTTCCCCTTGGTTCAAGAAATCCAGGCCCCAGTTGTCTGCTTTCATGCGT GATATTGGGGTGTGATGCGTGTGTGCCATTTTGACGTTTTGTCCGCTGCG CCTGAGTTTTGGGTTTTGTTGCCTTGATTTGTTTCTGTAAATGAAGGAAA AAGAATGTGCTGGACAAGCTGAACTATATCTTCATCCACAAGCTTATCAC GGGCGATCAGGCTACTACGGGCAAAGAGGGTGTCAGCGTCTCCAATAGCT CCGCCCTGCGGCTCGCGACAAGGTGAGCAATCAATCTGTTCTTTCTGTTT GATCATAACAACCAAGGCTAGACCCCCCCCCCCCGCACGCGCCGCTCAAG TGTGGACTTGAGCATGGAAGACATTGGATAAGTCAAGCAAATTCGCCCCT CGCCCCCTTCATACAAAAGCCTGGCCCAGAAACCAATCGCGGAACACGCA GCGTTTGACTCTGTCACCTGTGGGATATTTGGTACGGATGGACAAACCTG ACAGCCTACCCGTCCCCTTTCTCCCCGTCGTTACACCCTAGATGTACCCT CGGAACGCTGGTACAGGCGCGGGAGAGGGAACTGATGACTCACTGGGTAC AGTTGCTCAGCAAAAGTCTCCCACGCAGTTCGGACACGTGCTTGTGGCTA CTGAGCGAGCTAGGTCGTTTCCCGATCATCCTGAAGGAGCTAGTGCTGTC TGCGGAGGAAAGCGTGAGGCACGCAGCAGCTGAGATCGCCGGTGTGGCAC TGCAGCAGTGCATGCTGACTGCGAGCGGTGCAGGAGATGGAGAGAGATCG GAGGATGGTAATGATATATACCGTTCGGCGTACGAGGCAGCCGCCGGGGA GCAGGCGGATGTGAACCTGGAGTGGCAGGCGGGAGAGAACCTCACTGAAG GGTTCGTTGCGGTGGGCCAGGGAGATGTAGCCGCTGAGACAGAGGACGAC GATGCTCGCTTGGCGCGGAAAACGGTGCGCGTTTTTGTTGTGTGGAGGGG AGAGCACTCGGGCGTAGGTTGTGTCCATCGGGAAGTTTGTGATCACTTGT GCATCAGCAAACTATGATACTGCTATTTTTGTGCCGGTTGCTGCAAGAGA GAAGGGCATCGCGGAACGCTACAGAGGTGCGCCTGTTTTTCGTTGTAATA TCCCTTTGTCGCCGGGTGCAAGCCTACCACCGATGGACGTGAACCGCCCG TGCTACTGTTGTGTACCTCAGAGCCACGCTCGTCCGATCCCTCGTCATTT TCACTCTGCTCCCCTTTGAACTCGGCATGACTGACTGCGCAGGGATTGCT ATCGATTTGGAGTGGGAGGCAAGAAGCGATGGCGCCGTCCCATCGAGTGG TGGAAGAAAGCAAGGGGCGCACGCAGCCTTGGCCCCGAGAGGACGAGAAG GCGGCAGCGGCTTCTACGGTTGTCTTGTTCATCAGGGCTTGCCTCGGGCT CCTCTCTGTTGCGCCGGTGGGTGCCTCATGCCTACTGCTATTGCCACTGG ACCGTAGGCTATGAGTTCCACCCCAAGCCGTTTGATAATTCACATAGGTG ATGAGTGTCGTGATGAAGAACGCAACAACAGACACCGCACCATTTTCCTC TCTACATTGCAAACACATGACAGGGCATCAACCACTTGGAATGGGCGCGA AGCGAACAGCTCCTCTGCCTTCTCGCCACGGCAGCAGAATCCGGACCCTC GGGCCGATCCCACCTCCTACAAACTGGAACGTTAGGTGCCCTGATGTCCA TGTGTCTCGGGGACGACTCGCCCTACCCAGAACTAGTGCAATCGCCGCGC CCCAGGAGGAGACGTGTGTCAGGAGAGGACGGTTCATCCCCTGCCTCCCC GCGCAGGACATACCGCTCGTCGTTTTCGCCTGTAGCAGATGCGGCGGGAA GTGGCGAGACAGGCG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig579:26654..35068-

>mRNA_L-elsbetiae_contig579.14210.1 ID=mRNA_L-elsbetiae_contig579.14210.1|Name=mRNA_L-elsbetiae_contig579.14210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5892bp|location=Sequence derived from alignment at L-elsbetiae_contig579:26654..35068- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGGCATGGTTTGGTTAGGGAGCTGGTGGAGCGTTGTCTGTTCTCGCT
TCCACAGGAAAGGCGGGATGTTGTCGCTTCTTCTGCGGGTGGCAGTGATG
ATGTGCTCAGCAAAGGAGGGACGGGAAATGGCGACGATCGCGGGGGCGGG
CATGGTTTGGTTAGGGAGCTGGTGGAGCGTTGTCTGTTCTCGCTTCCACA
GGAAAGGCGGGATGTTGTCGCTTCTTCTGCGGGTGGCAGTGATGATGTGC
TCAGCAAAGGAGGGACGGGAAATGGCGACGATCGCGGGTTCGAGGGGATA
CCCTTGCCCAAGTGCAAGAGCGACAAGAGCCGCGAAGGGGCGTTCTACCT
GCTCAACGAGCTAGCCTTAGGCTGCCCTTCCAACCTCGATCTCTTCGAGG
GGATACCCTTGCCCAAGTGCAAGAGCGACAAGAGCCGCGAAGGGGCGTTC
TACCTGCTCAACGAGCTAGCCTTAGGCTGCCCTTCCAACCTCGATCTCAC
GGTGGCGCTGGTGGGACCTCAGCACTATCTTGGACTTACGAACGAGGATG
GCCGGAGGGACAGACGGTGGCGCTGGTGGGACCTCAGCACTATCTTGGAC
TTACGAACGAGGATGGCCGGAGGGACAGATCGTCTGGGGGCATCGGAGGG
ATGTCGACGCATCCATCTGCGGACGACAGGGATGGGGATGATAGGCAGGT
CAAGTTTAGAGCAAGGACGACATCTTTCGGGCAGCAGCCGCACCAGATAG
CCAAGCACAAGAGCAAGACCGGCTTTGTCGGCCTAAAAAACATGGGCTGC
ATCTGCTACATGAACAGCACTCTGCAGCAGATCGTCTGGGGGCATCGGAG
GGATGTCGACGCATCCATCTGCGGACGACAGGGATGGGGATGATAGGCAG
GTCAAGTTTAGAGCAAGGACGACATCTTTCGGGCAGCAGCCGCACCAGAT
AGCCAAGCACAAGAGCAAGACCGGCTTTGTCGGCCTAAAAAACATGGGCT
GCATCTGCTACATGAACAGCACTCTGCAGCAGCTATTCATGGTTCCGGAG
TTCCGAGAAGGCGTGCTCGGCTTCCGAGACAGCGAACAGACACCATCTGA
AGACAGCATCATGTGGCAGTTACAGAACATGTTCAGCCACCTACAGCTAT
TCATGGTTCCGGAGTTCCGAGAAGGCGTGCTCGGCTTCCGAGACAGCGAA
CAGACACCATCTGAAGACAGCATCATGTGGCAGTTACAGAACATGTTCAG
CCACCTACAGGAGTCGGAAAAGGTCCACTTCAACCCGGTGGGACTAGTGC
GCTCGCTTCGAGACTGGGAGGGGCAGCCTCTGGATGTGATGGTACAGCAA
GACGCCTCGGAGTTCATCACTCAGTTCTTTCAGCAGGAGTCGGAAAAGGT
CCACTTCAACCCGGTGGGACTAGTGCGCTCGCTTCGAGACTGGGAGGGGC
AGCCTCTGGATGTGATGGTACAGCAAGACGCCTCGGAGTTCATCACTCAG
TTCTTTCAGCAGGTGGAAGGGCAAGTGATGGGGTCCTCCAGCGAGAACAT
TCTCAAGCAGTCGTTCGGCGGTGTTTACAGCAATGAGCTGCTCGCAGAGG
GCGGAAGCCTTTACAGCGAACGCCCAGAGCCCTTCTCCTACATTTCCGTA
GAGGTGGAAGGGCAAGTGATGGGGTCCTCCAGCGAGAACATTCTCAAGCA
GTCGTTCGGCGGTGTTTACAGCAATGAGCTGCTCGCAGAGGGCGGAAGCC
TTTACAGCGAACGCCCAGAGCCCTTCTCCTACATTTCCGTAGAGGTGAAA
AATATGAAGACACTGGCCGAGGCTCTGGAAGTTTTCACCTCAGAGGAGGT
GGTGAGCTTCAAGTGGGACAAGGAAGTCAATGCCGACACAGGTGAAAAAT
ATGAAGACACTGGCCGAGGCTCTGGAAGTTTTCACCTCAGAGGAGGTGGT
GAGCTTCAAGTGGGACAAGGAAGTCAATGCCGACACAGGCGAGCGCCAGG
CGGTGACTCTGAGCACGAAAAAGAGGTGCTCCATCAAGTCCCTCCCGAAC
CACCTCCTGATACACCTCAAGCGCTTCGACTTCGATTTCGACACCATGCA
GCAGACTAAGGCGAGCGCCAGGCGGTGACTCTGAGCACGAAAAAGAGGTG
CTCCATCAAGTCCCTCCCGAACCACCTCCTGATACACCTCAAGCGCTTCG
ACTTCGATTTCGACACCATGCAGCAGACTAAGATCAACGACCGCTTGGAG
TTTCCGCTAGAGCTGAACATGCACCCTTACACCAAGGAGGGACGTGCTGC
AACCGCCGCCACCGAAGAGGTGGCTCAACGACATGCCAAAACCGGGGATG
AGAACGATGATGAGATCAACGACCGCTTGGAGTTTCCGCTAGAGCTGAAC
ATGCACCCTTACACCAAGGAGGGACGTGCTGCAACCGCCGCCACCGAAGA
GGTGGCTCAACGACATGCCAAAACCGGGGATGAGAACGATGATGAGGGGA
AGGGTAGCGGCGGTGACGAGAAGGAGAAGGAAAGCAAGCCGGAAGAGTAT
TATCACTACCATCTTGCAGGAGTGGTGGTGCACATGGGTACCGCCAACTC
TGGGCACTACTACAGCTACATCCGCCCCCGGGATGGCGGCGGCGAGTGGT
TGGAGTTTAACGACACTATCGTGTCCACCTTCGATACGGAGGGGAAGGGT
AGCGGCGGTGACGAGAAGGAGAAGGAAAGCAAGCCGGAAGAGTATTATCA
CTACCATCTTGCAGGAGTGGTGGTGCACATGGGTACCGCCAACTCTGGGC
ACTACTACAGCTACATCCGCCCCCGGGATGGCGGCGGCGAGTGGTTGGAG
TTTAACGACACTATCGTGTCCACCTTCGATACGGAGGACATGGAAGCGGA
GTGTTTCGGTGGCGAGGAAAATGTAAATGCTCACCAGCAGTGGAAGCGCG
AGAGGACCCGAAATGCTTTCATGCTGGTTTACGACAGGGTCATGCCGCAA
CCGCATGGCGAGCCGACGGCGGGGGACAAGGATGACGCTTCCCCGCTTCC
TCCTGCCTCTTCTCTGCCGTCGCCGCCGGTTGTGTCGCCTGCTTCGCCCT
CTGCGTCCCTTCCGTCCCGGCTGTCCCCGCTCTCTGCCACCCCTGATGCT
CCTGCTGCGGAGGACAATGACGCGGCTGGTGCTTTGCCGAGACCGGGAGC
GGGCGGTGGTTCGCCGGCCGTAGCGCGACGTGACCACGACGCCAACGTGT
ACAGGCAGGAGAGGGCAAGTGCGGTTCGAGGGTGGCGGCGAAGAAAGAGG
TTCAGAGCGAAAGTTCCCGCCGTGTTCATGCGCCAGATACAACGGGAGAA
CCTGGAGTTTTGGAGGACATGGAAGCGGAGTGTTTCGGTGGCGAGGAAAA
TGTAAATGCTCACCAGCAGTGGAAGCGCGAGAGGACCCGAAATGCTTTCA
TGCTGGTTTACGACAGGGTCATGCCGCAACCGCATGGCGAGCCGACGGCG
GGGGACAAGGATGACGCTTCCCCGCTTCCTCCTGCCTCTTCTCTGCCGTC
GCCGCCGGTTGTGTCGCCTGCTTCGCCCTCTGCGTCCCTTCCGTCCCGGC
TGTCCCCGCTCTCTGCCACCCCTGATGCTCCTGCTGCGGAGGACAATGAC
GCGGCTGGTGCTTTGCCGAGACCGGGAGCGGGCGGTGGTTCGCCGGCCGT
AGCGCGACGTGACCACGACGCCAACGTGTACAGGCAGGAGAGGGCAAGTG
CGGTTCGAGGGTGGCGGCGAAGAAAGAGGTTCAGAGCGAAAGTTCCCGCC
GTGTTCATGCGCCAGATACAACGGGAGAACCTGGAGTTTTGGAGGAAAAA
GAATGTGCTGGACAAGCTGAACTATATCTTCATCCACAAGCTTATCACGG
GCGATCAGGCTACTACGGGCAAAGAGGGTGTCAGCGTCTCCAATAGCTCC
GCCCTGCGGCTCGCGACAAGGAAAAAGAATGTGCTGGACAAGCTGAACTA
TATCTTCATCCACAAGCTTATCACGGGCGATCAGGCTACTACGGGCAAAG
AGGGTGTCAGCGTCTCCAATAGCTCCGCCCTGCGGCTCGCGACAAGATGT
ACCCTCGGAACGCTGGTACAGGCGCGGGAGAGGGAACTGATGACTCACTG
GGTACAGTTGCTCAGCAAAAGTCTCCCACGCAGTTCGGACACGTGCTTGT
GGCTACTGAGCGAGCTAGGTCGTTTCCCGATCATCCTGAAGGAGCTAGTG
CTGTCTGCGGAGGAAAGCGTGAGGCACGCAGCAGCTGAGATCGCCGGTGT
GGCACTGCAGCAGTGCATGCTGACTGCGAGCGGTGCAGGAGATGGAGAGA
GATCGGAGGATGGTAATGATATATACCGTTCGGCGTACGAGGCAGCCGCC
GGGGAGCAGGCGGATGTGAACCTGGAGTGGCAGGCGGGAGAGAACCTCAC
TGAAGGGTTCGTTGCGGTGGGCCAGGGAGATGTAGCCGCTGAGACAGAGG
ACGACGATGCTCGCTTGGCGCGGAAAACGATGTACCCTCGGAACGCTGGT
ACAGGCGCGGGAGAGGGAACTGATGACTCACTGGGTACAGTTGCTCAGCA
AAAGTCTCCCACGCAGTTCGGACACGTGCTTGTGGCTACTGAGCGAGCTA
GGTCGTTTCCCGATCATCCTGAAGGAGCTAGTGCTGTCTGCGGAGGAAAG
CGTGAGGCACGCAGCAGCTGAGATCGCCGGTGTGGCACTGCAGCAGTGCA
TGCTGACTGCGAGCGGTGCAGGAGATGGAGAGAGATCGGAGGATGGTAAT
GATATATACCGTTCGGCGTACGAGGCAGCCGCCGGGGAGCAGGCGGATGT
GAACCTGGAGTGGCAGGCGGGAGAGAACCTCACTGAAGGGTTCGTTGCGG
TGGGCCAGGGAGATGTAGCCGCTGAGACAGAGGACGACGATGCTCGCTTG
GCGCGGAAAACGGGATTGCTATCGATTTGGAGTGGGAGGCAAGAAGCGAT
GGCGCCGTCCCATCGAGTGGTGGAAGAAAGCAAGGGGCGCACGCAGCCTT
GGCCCCGAGAGGACGAGAAGGCGGCAGCGGCTTCTACGGTTGTCTTGTTC
ATCAGGGCTTGCCTCGGGCTCCTCTCTGTTGCGCCGGGATTGCTATCGAT
TTGGAGTGGGAGGCAAGAAGCGATGGCGCCGTCCCATCGAGTGGTGGAAG
AAAGCAAGGGGCGCACGCAGCCTTGGCCCCGAGAGGACGAGAAGGCGGCA
GCGGCTTCTACGGTTGTCTTGTTCATCAGGGCTTGCCTCGGGCTCCTCTC
TGTTGCGCCGGGCATCAACCACTTGGAATGGGCGCGAAGCGAACAGCTCC
TCTGCCTTCTCGCCACGGCAGCAGAATCCGGACCCTCGGGCCGATCCCAC
CTCCTACAAACTGGAACGTTAGGTGCCCTGATGTCCATGTGTCTCGGGGA
CGACTCGCCCTACCCAGAACTAGTGCAATCGCCGCGCCCCAGGAGGAGAC
GTGTGTCAGGAGAGGACGGTTCATCCCCTGCCTCCCCGCGCAGGACATAC
CGCTCGTCGTTTTCGCCTGTAGCAGATGCGGCGGGAAGTGGCGAGACAGG
CGGCATCAACCACTTGGAATGGGCGCGAAGCGAACAGCTCCTCTGCCTTC
TCGCCACGGCAGCAGAATCCGGACCCTCGGGCCGATCCCACCTCCTACAA
ACTGGAACGTTAGGTGCCCTGATGTCCATGTGTCTCGGGGACGACTCGCC
CTACCCAGAACTAGTGCAATCGCCGCGCCCCAGGAGGAGACGTGTGTCAG
GAGAGGACGGTTCATCCCCTGCCTCCCCGCGCAGGACATACCGCTCGTCG
TTTTCGCCTGTAGCAGATGCGGCGGGAAGTGGCGAGACAGGC
back to top