Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | mitochondrion |
Exons | 1 |
Model size | 447 |
Cds size | 306 |
Stop | 1 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816617.6107652-CDS-L-elsbetiae_contig5763:1103..1409 | 1622816617.6107652-CDS-L-elsbetiae_contig5763:1103..1409 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5763 1104..1409 + |
1691683688.0546207-CDS-L-elsbetiae_contig5763:1103..1409 | 1691683688.0546207-CDS-L-elsbetiae_contig5763:1103..1409 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5763 1104..1409 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816617.6248505-UTR-L-elsbetiae_contig5763:1409..1549 | 1622816617.6248505-UTR-L-elsbetiae_contig5763:1409..1549 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5763 1410..1549 + |
1691683688.0688488-UTR-L-elsbetiae_contig5763:1409..1549 | 1691683688.0688488-UTR-L-elsbetiae_contig5763:1409..1549 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5763 1410..1549 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5763.14173.1 >prot_L-elsbetiae_contig5763.14173.1 ID=prot_L-elsbetiae_contig5763.14173.1|Name=mRNA_L-elsbetiae_contig5763.14173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
PLSGPRRFLFSSCSSLVATYKHARTLHNTAVIYAAPLFQNQLAIDPHSDA NPSRLSPSFGMHCILPSRQKPGGPNPPPSISIGLSLGGGGQTGKPKLRQQ Q* back to topmRNA from alignment at L-elsbetiae_contig5763:1104..1549+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5763.14173.1 ID=mRNA_L-elsbetiae_contig5763.14173.1|Name=mRNA_L-elsbetiae_contig5763.14173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=446bp|location=Sequence derived from alignment at L-elsbetiae_contig5763:1104..1549+ (Laminarionema elsbetiae ELsaHSoW15) CCGCTCTCAGGACCAAGGCGCTTTCTTTTCTCGTCTTGCTCATCTCTAGT
CGCTACATACAAGCACGCACGCACGCTACACAACACCGCTGTAATTTATG
CAGCTCCCTTGTTTCAAAACCAGCTCGCGATCGACCCTCACAGCGACGCT
AACCCTTCTCGACTCTCGCCGTCCTTTGGCATGCATTGCATCCTCCCCTC
CCGACAAAAACCGGGAGGCCCTAACCCCCCCCCATCTATCTCAATCGGTC
TGAGTCTGGGTGGGGGGGGGCAGACAGGGAAACCTAAATTGAGGCAACAG
CAGTAGCCCGATCTCTTGGTTACCCGTTGAGCCCGCGGCTTTGACCGAGG
CAGCGAAAGATCACCTTTTCTAAAATATTCAGCAAATGAATATATGCACC
ACGAACGCGCACGATATGTTACACCTTCCGCCCCGCCCGAGTGAAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5763:1104..1549+ >mRNA_L-elsbetiae_contig5763.14173.1 ID=mRNA_L-elsbetiae_contig5763.14173.1|Name=mRNA_L-elsbetiae_contig5763.14173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=612bp|location=Sequence derived from alignment at L-elsbetiae_contig5763:1104..1549+ (Laminarionema elsbetiae ELsaHSoW15) CCGCTCTCAGGACCAAGGCGCTTTCTTTTCTCGTCTTGCTCATCTCTAGT CGCTACATACAAGCACGCACGCACGCTACACAACACCGCTGTAATTTATG CAGCTCCCTTGTTTCAAAACCAGCTCGCGATCGACCCTCACAGCGACGCT AACCCTTCTCGACTCTCGCCGTCCTTTGGCATGCATTGCATCCTCCCCTC CCGACAAAAACCGGGAGGCCCTAACCCCCCCCCATCTATCTCAATCGGTC TGAGTCTGGGTGGGGGGGGGCAGACAGGGAAACCTAAATTGAGGCAACAG CAGTAGCCGCTCTCAGGACCAAGGCGCTTTCTTTTCTCGTCTTGCTCATC TCTAGTCGCTACATACAAGCACGCACGCACGCTACACAACACCGCTGTAA TTTATGCAGCTCCCTTGTTTCAAAACCAGCTCGCGATCGACCCTCACAGC GACGCTAACCCTTCTCGACTCTCGCCGTCCTTTGGCATGCATTGCATCCT CCCCTCCCGACAAAAACCGGGAGGCCCTAACCCCCCCCCATCTATCTCAA TCGGTCTGAGTCTGGGTGGGGGGGGGCAGACAGGGAAACCTAAATTGAGG CAACAGCAGTAG back to top
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