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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1974 |
| Cds size | 993 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816616.9733315-UTR-L-elsbetiae_contig5759:9103..9112 | 1622816616.9733315-UTR-L-elsbetiae_contig5759:9103..9112 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5759 9104..9112 + |
| 1691683687.6409388-UTR-L-elsbetiae_contig5759:9103..9112 | 1691683687.6409388-UTR-L-elsbetiae_contig5759:9103..9112 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5759 9104..9112 + |
| 1622816616.9989407-UTR-L-elsbetiae_contig5759:10105..10131 | 1622816616.9989407-UTR-L-elsbetiae_contig5759:10105..10131 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5759 10106..10131 + |
| 1691683687.6771827-UTR-L-elsbetiae_contig5759:10105..10131 | 1691683687.6771827-UTR-L-elsbetiae_contig5759:10105..10131 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5759 10106..10131 + |
| 1622816617.0135164-UTR-L-elsbetiae_contig5759:10798..11274 | 1622816617.0135164-UTR-L-elsbetiae_contig5759:10798..11274 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5759 10799..11274 + |
| 1691683687.6893404-UTR-L-elsbetiae_contig5759:10798..11274 | 1691683687.6893404-UTR-L-elsbetiae_contig5759:10798..11274 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5759 10799..11274 + |
| 1622816617.0298476-UTR-L-elsbetiae_contig5759:11306..11776 | 1622816617.0298476-UTR-L-elsbetiae_contig5759:11306..11776 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5759 11307..11776 + |
| 1691683687.7095299-UTR-L-elsbetiae_contig5759:11306..11776 | 1691683687.7095299-UTR-L-elsbetiae_contig5759:11306..11776 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5759 11307..11776 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816616.9886482-CDS-L-elsbetiae_contig5759:9112..10105 | 1622816616.9886482-CDS-L-elsbetiae_contig5759:9112..10105 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5759 9113..10105 + |
| 1691683687.663295-CDS-L-elsbetiae_contig5759:9112..10105 | 1691683687.663295-CDS-L-elsbetiae_contig5759:9112..10105 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5759 9113..10105 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5759.14168.1 >prot_L-elsbetiae_contig5759.14168.1 ID=prot_L-elsbetiae_contig5759.14168.1|Name=mRNA_L-elsbetiae_contig5759.14168.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=331bp
MVNVRAKKTASATRPKEGEGGTTKVAASTAAGRGRLKKSVREAKEGSPSA
ATAATAARKSCSHAGCSTWPSFGLEGSKKLEFCGRHARAGMVNLVKARCG
QQRCTKHPIFGVEGTKKAQFCLRHRLDGMVDVLNKRCAHQACAMTPCFGK
EGTKTPEFCLQHRGDGMVNVTKKRCGNAACPKQPSYAPEGAPPRFCAEHA
GDGMINVTTKKCGHPACTKQARHGVEGTKKAEFCFGHAKEGMVSVIQKKK
KDSAPSSNKKRAGSSVSRGGNGGRPRKRSRRPVKGAASSSLAAAAAAPVK
EEEDALGGVASPAETQRRSEQRVDMEAVPV* back to topmRNA from alignment at L-elsbetiae_contig5759:9104..11776+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5759.14168.1 ID=mRNA_L-elsbetiae_contig5759.14168.1|Name=mRNA_L-elsbetiae_contig5759.14168.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2673bp|location=Sequence derived from alignment at L-elsbetiae_contig5759:9104..11776+ (Laminarionema elsbetiae ELsaHSoW15)
CCGCAAGGGATGGTGAACGTGCGCGCCAAGAAGACAGCCTCGGCAACCAG
GCCGAAGGAGGGGGAGGGGGGGACGACAAAGGTCGCCGCAAGCACGGCTG
CCGGGCGCGGGCGTCTGAAGAAGAGCGTGAGGGAGGCGAAAGAAGGGAGC
CCTAGTGCCGCCACCGCCGCCACCGCCGCCAGGAAGAGCTGCAGCCACGC
CGGTTGCAGCACGTGGCCGTCGTTTGGCCTCGAAGGGAGCAAGAAGCTTG
AGTTCTGCGGGCGGCACGCGAGAGCCGGAATGGTAAACCTCGTCAAGGCG
AGATGCGGCCAGCAAAGGTGCACCAAGCACCCTATCTTCGGCGTGGAGGG
CACCAAGAAGGCGCAGTTCTGCCTGCGGCACCGCCTGGACGGAATGGTTG
ACGTCCTGAACAAGAGGTGCGCCCACCAGGCCTGCGCCATGACGCCGTGC
TTCGGCAAAGAGGGCACCAAGACGCCCGAGTTCTGCCTGCAGCACCGCGG
GGACGGCATGGTCAACGTCACCAAGAAGAGGTGCGGCAACGCGGCCTGCC
CCAAGCAGCCGTCGTACGCGCCGGAGGGGGCGCCGCCCAGGTTTTGCGCC
GAGCACGCCGGGGACGGCATGATCAACGTCACCACCAAGAAGTGCGGCCA
CCCGGCCTGCACCAAGCAGGCGCGCCACGGTGTGGAAGGCACCAAGAAGG
CGGAGTTCTGTTTCGGCCACGCGAAGGAGGGAATGGTGAGCGTCATTCAA
AAGAAGAAGAAGGATTCGGCGCCCAGCAGCAACAAAAAACGCGCAGGTAG
TTCCGTTTCCCGTGGCGGCAACGGCGGCAGGCCCAGGAAGCGATCCCGCC
GCCCCGTCAAGGGGGCGGCGTCGTCGTCGTTGGCGGCGGCGGCGGCGGCT
CCGGTCAAGGAAGAAGAAGACGCGCTCGGAGGGGTGGCGTCCCCTGCGGA
AACGCAGCGTCGAAGCGAGCAGCGGGTCGACATGGAGGCCGTCCCCGTGT
AGGCACTGTGGTCGGGGAGCTTTAAAAGGTGCGTTGCAAGCGGTGTCTGA
ACGGGACCTTGCTTCTTTCGGCACCTATGTAGGACACATGAGGCGGGTTG
AGGGTGCTTTTTGTGGTTGCGGCCGCCTTCACGTTTCCATCTGTCCCGAC
CATATCTGTGCGGTATTGGAGAATCCTGCCTGTTTTTTTTTTTTTGTGGT
GGCTGGTTGATTAGGTAGGTGTGAATCGCAGACATGAATTCGCAGAGAAA
TCGAGTCGAACCGACGATCAGAACAATGGCTAGTCTAACGATCAGGACAA
TTGCCAGCAACGTACAGGAATGGAAATAGATTAAGACAACATCATTGGAC
ACTCCTGAGCATCTTGCGGCCCGGGCACACGTCCAACGCTATTCCGTTGG
ATGGCATGGTGTCGTTGTTCTGTACATAAAGCGTTGCGCTTCAGGTATCG
TCATCGTCAATGTGCAGCGGTTGCCCGTTGTAAACGTTGCACACGAAGCA
CCACCTAGAGCCTTGACTACCCTCGTACTTCTAGCGAGCCCCCGTGCTCC
TATTAGCGACCCGCCAACAGCTATTGGTTGGCGCTTCGAAGCACGGAGCG
TTCAGATTCGTGTTCATCTTGGTGCCTTGTATTCCTCAATCTGCCCCCGC
TTCCCCATGTTTGGTGTCGTGCGCACCCTCTTTCCACTTGAAAAGAAAAA
AAGCTCAGGACGGACGACCGGGGTAGCAGGCGAGACAGATAGAGGCAGTG
GAACCGCGGAACGGTTTGTGTCTATAAGAGACTGTTTTATGGCGCAAGCA
AGCTCAAGTACTACTGATGTGCTGCGAACGGGAACCGCGAGGAAGGCTCT
TTCCTTGTCGCGCCGTGTTTTTTTTTGCTTTTCCTGATTTGTTTGCCGGC
CTTGCAACCTAACCTCGTCATGTTTAGCTGCCCTGGGTGCCTGGGTGTTG
TGGGTCGACAAGCAGCCGGCAGTTTCTTTTTGCCTCAAGCCGCCCGCCGC
GGGGGTCATATCTCAGAGGATCATTTACCCCTCAAACTCAAGGGTAACAA
AAAACTTGTTTTTATGCCCAACCTGCCCCCCCACGGGGTCGGCACCTCTC
CTTGGAAACGAGTTCTTAAAAGGGCAACGGCCAAGACAAGGTATACCTTG
TGGTCAGTTGGCCAAAACAGGGTATATACCTTGTGGTTAGTTGGCCCAAA
CAGGGTATATGTGGTGCCGAACTTCAACGTGCAGGGCCTACTTAGCCCAG
CCTCACGTAGAGTCTCGGAGGCTGTCCCATCAGAGTCTAACCCGTGCACA
GCGTCAATGTATGTCTACATACATGCTCGGGGGCGGGGTAGACTCTCCGC
CGTGCAACTGCGCACGGCCGCAGCATGACCTCGTTTGTACAGTAGTAGTG
TGACGGCGGGACTGTTGAGTTGGTTGTTGGGGTAGGGTAAGTAACACGTT
TGGTTCAGCGGGCATCCGCATGATCAAATGTAAGCAGGAAGGACACTTTT
CTCGTGGGTCAGTAGGCCGCACGAAGGCCCTGGTCCCCGACAAAGAGCCC
CGGTTTCCGGCCAAGAGAGGGTGAACGAGTGGCAAAACAAGTGTATTTAG
CCAGGAGTTGAGCGGCCACGCGAGTGTTTTTTTCGGCCAAAAGAGGGTGC
TAGGAGGAATTTTTTACTTGAAC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5759:9104..11776+ >mRNA_L-elsbetiae_contig5759.14168.1 ID=mRNA_L-elsbetiae_contig5759.14168.1|Name=mRNA_L-elsbetiae_contig5759.14168.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1986bp|location=Sequence derived from alignment at L-elsbetiae_contig5759:9104..11776+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGAACGTGCGCGCCAAGAAGACAGCCTCGGCAACCAGGCCGAAGGA
GGGGGAGGGGGGGACGACAAAGGTCGCCGCAAGCACGGCTGCCGGGCGCG
GGCGTCTGAAGAAGAGCGTGAGGGAGGCGAAAGAAGGGAGCCCTAGTGCC
GCCACCGCCGCCACCGCCGCCAGGAAGAGCTGCAGCCACGCCGGTTGCAG
CACGTGGCCGTCGTTTGGCCTCGAAGGGAGCAAGAAGCTTGAGTTCTGCG
GGCGGCACGCGAGAGCCGGAATGGTAAACCTCGTCAAGGCGAGATGCGGC
CAGCAAAGGTGCACCAAGCACCCTATCTTCGGCGTGGAGGGCACCAAGAA
GGCGCAGTTCTGCCTGCGGCACCGCCTGGACGGAATGGTTGACGTCCTGA
ACAAGAGGTGCGCCCACCAGGCCTGCGCCATGACGCCGTGCTTCGGCAAA
GAGGGCACCAAGACGCCCGAGTTCTGCCTGCAGCACCGCGGGGACGGCAT
GGTCAACGTCACCAAGAAGAGGTGCGGCAACGCGGCCTGCCCCAAGCAGC
CGTCGTACGCGCCGGAGGGGGCGCCGCCCAGGTTTTGCGCCGAGCACGCC
GGGGACGGCATGATCAACGTCACCACCAAGAAGTGCGGCCACCCGGCCTG
CACCAAGCAGGCGCGCCACGGTGTGGAAGGCACCAAGAAGGCGGAGTTCT
GTTTCGGCCACGCGAAGGAGGGAATGGTGAGCGTCATTCAAAAGAAGAAG
AAGGATTCGGCGCCCAGCAGCAACAAAAAACGCGCAGGTAGTTCCGTTTC
CCGTGGCGGCAACGGCGGCAGGCCCAGGAAGCGATCCCGCCGCCCCGTCA
AGGGGGCGGCGTCGTCGTCGTTGGCGGCGGCGGCGGCGGCTCCGGTCAAG
GAAGAAGAAGACGCGCTCGGAGGGGTGGCGTCCCCTGCGGAAACGCAGCG
TCGAAGCGAGCAGCGGGTCGACATGGAGGCCGTCCCCGTGTAGATGGTGA
ACGTGCGCGCCAAGAAGACAGCCTCGGCAACCAGGCCGAAGGAGGGGGAG
GGGGGGACGACAAAGGTCGCCGCAAGCACGGCTGCCGGGCGCGGGCGTCT
GAAGAAGAGCGTGAGGGAGGCGAAAGAAGGGAGCCCTAGTGCCGCCACCG
CCGCCACCGCCGCCAGGAAGAGCTGCAGCCACGCCGGTTGCAGCACGTGG
CCGTCGTTTGGCCTCGAAGGGAGCAAGAAGCTTGAGTTCTGCGGGCGGCA
CGCGAGAGCCGGAATGGTAAACCTCGTCAAGGCGAGATGCGGCCAGCAAA
GGTGCACCAAGCACCCTATCTTCGGCGTGGAGGGCACCAAGAAGGCGCAG
TTCTGCCTGCGGCACCGCCTGGACGGAATGGTTGACGTCCTGAACAAGAG
GTGCGCCCACCAGGCCTGCGCCATGACGCCGTGCTTCGGCAAAGAGGGCA
CCAAGACGCCCGAGTTCTGCCTGCAGCACCGCGGGGACGGCATGGTCAAC
GTCACCAAGAAGAGGTGCGGCAACGCGGCCTGCCCCAAGCAGCCGTCGTA
CGCGCCGGAGGGGGCGCCGCCCAGGTTTTGCGCCGAGCACGCCGGGGACG
GCATGATCAACGTCACCACCAAGAAGTGCGGCCACCCGGCCTGCACCAAG
CAGGCGCGCCACGGTGTGGAAGGCACCAAGAAGGCGGAGTTCTGTTTCGG
CCACGCGAAGGAGGGAATGGTGAGCGTCATTCAAAAGAAGAAGAAGGATT
CGGCGCCCAGCAGCAACAAAAAACGCGCAGGTAGTTCCGTTTCCCGTGGC
GGCAACGGCGGCAGGCCCAGGAAGCGATCCCGCCGCCCCGTCAAGGGGGC
GGCGTCGTCGTCGTTGGCGGCGGCGGCGGCGGCTCCGGTCAAGGAAGAAG
AAGACGCGCTCGGAGGGGTGGCGTCCCCTGCGGAAACGCAGCGTCGAAGC
GAGCAGCGGGTCGACATGGAGGCCGTCCCCGTGTAG back to top
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