mRNA_L-elsbetiae_contig5758.14164.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5758.14164.1
Unique NamemRNA_L-elsbetiae_contig5758.14164.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Match: D7G4L7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4L7_ECTSI)

HSP 1 Score: 717 bits (1852), Expect = 1.120e-253
Identity = 329/402 (81.84%), Postives = 368/402 (91.54%), Query Frame = 3
Query:    3 FPLGEDDIHVVFSSDCTNYQAWQAVVLFHSAIVSGHTGPITQLISGCSEEEEEEITSRHLAVRHTPKHKLFFTPSFAIKNPQTGEPYPYMNKPNAMQLWFSQIEIHETIVALIDPDFIFLKPLTTWMNPKDTVVRGDGLSLEGLKLENGGWVRKGYPAGQRFGLPNWTKWDRTKICPGESLCATTTTSTAKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAAAALNLKHYRLNNLAVESEKVDYEMWDPVDNQMDNVCDIGIEPRDTESRDIRSFDRMPHFIHYCHMYRVGQWLFNKRRYRKDHNYDQLQCDTPLLEAPPMDIQDKSFKMHPGARYEEISSRSAKRNAFVLCTATRFVNSALRHFKGRLCAEGQPPNLDQTVRIA 1208
            FPLGEDDIHVVFSSDCTNYQAWQAVVLFHSAI+SGHTGPITQLISGCS+EE+ E  SRH  VRH+PKHKLFFTP F  KNP+TGEPYPYMNKPNAMQ+W  Q E+ ETIVALIDPDFIFLKPLTTW++P +TVV+GDGLSLEGLKLENGGWVRKGYPAGQRFGLPNWT WD + ICP ++LCATT+T+ AKRYYDLIPPYLAH+DDW RLLPEWV  APKVYE +PSLLAEQTAYATAAA L++KHYR+NN A+E+EKVDYE+WDPVD+QMDNVCDIGIEPRD +SR++RSFDR+P+FIHYCHMYRVGQWLFNKRRYRK+ +YDQLQCDTP+LE PPM+IQ+ ++KMHPGARYE I+ RSAKRNAFVLC ATRFVNSALRHFKGR+CAEG P NLD TVRIA
Sbjct:  162 FPLGEDDIHVVFSSDCTNYQAWQAVVLFHSAILSGHTGPITQLISGCSDEEQAEAESRHEVVRHSPKHKLFFTPGFVTKNPETGEPYPYMNKPNAMQIWLDQTEVEETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGLPNWTHWDLSNICPDDALCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNYAIENEKVDYELWDPVDHQMDNVCDIGIEPRDIKSRNVRSFDRLPNFIHYCHMYRVGQWLFNKRRYRKESDYDQLQCDTPMLETPPMNIQESTYKMHPGARYESITPRSAKRNAFVLCMATRFVNSALRHFKGRMCAEGFP-NLDYTVRIA 562          
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Match: A0A835ZI64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI64_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.120e-67
Identity = 147/400 (36.75%), Postives = 217/400 (54.25%), Query Frame = 3
Query:    6 PLGEDDIHVVFSSDCTNYQAWQAVVLFHSAIVSGHTGPITQLISGCSEEEEEEITSRHLAVRHTPKHKLFFTPSFAIKNPQTGEPYPYMNKPNAMQLWFSQIE--IHETIVALIDPDFIFLKPLTTWMNPKDTVVRGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTKWDRT-KICPGE-SLCATTTTSTAKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAAAALNLKHYRLNNLAVESEKVDYEMWDPVDN-QMDNVCDIGIEPRDTESRDIRSFDRMPHFIHYCHMYRVGQWLFNKRRYRKDHNYDQLQCDTPLLEAPPMDIQDKSFKMHP----GARYEEISSRSAKRNAFVLCTATRFVNSALRHFKGRLCAEGQ 1175
            P  E D+HVVFS++C++YQ WQ+++LF SA  +GH GPIT+L  GCS E++ EI   H  +   P H++ FTP +++ +  TG  YPY NKP  MQ + +     I  TIVA++DPD +F+KPLT +++P DT +  D  ++  L+      + +GYPA QR+GL + W +WD   +I   E S   T     A  +Y + PPY+AH  DW ++  +WVE  P+    +P LL+E  A   A+A L L H  +    V +     E W  +D    D VC+    P DT +        +P  IHYC  +RVG + + K   +     +  +CD+P L  PP  +     K+ P    GA    +S   AKR+AFV+C  T+ +N ALR F+  +C   Q
Sbjct:   38 PRDEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHM--PPHHRVHFTPDYSVIS-STGHRYPYYNKPFGMQHFLATANPPITNTIVAVLDPDQVFMKPLTPFLDP-DTTILADRNTMPPLRFNGMPVITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEGWPLIDKLSEDEVCNAHNAP-DTSA--------LPVVIHYCQHFRVGIYSWGKWEPKLQ---ELFKCDSPYLLEPPDHLASLRIKIEPDHLDGA---PLSPLLAKRHAFVICALTKILNEALRDFRKAMCPSDQ 418          
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Match: A0A836CDP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP3_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.520e-64
Identity = 139/395 (35.19%), Postives = 207/395 (52.41%), Query Frame = 3
Query:    6 PLGEDDIHVVFSSDCTNYQAWQAVVLFHSAIVSGHTGPITQLISGCSEEEEEEITSRHLAVRHTPKHKLFFTPSFAIKNPQTGEPYPYMNKPNAMQLWFSQIE--IHETIVALIDPDFIFLKPLTTWMNPK-DTVVRGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTKWDRTKICPGE--SLCATTTTSTAKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAAAALNLKHYRLNNLAVE--SEKVDYEMWDPVDNQMD-NVCDIGIEPRDTESRDIRSFDRMPHFIHYCHMYRVGQWLFNKRRYRKDHNYDQLQCDTPLLEAPPMDIQDKSFKMHPGARYEEISSRSAKRNAFVLCTATRFVNSALRHFKGRLC 1163
            P   DDIH+VFS+DC++YQ WQ+++ F+SA  +G  GP+T+L SGCSE +  E+   H  +    +H++ FTP F++ + +TG  YPY NKP A++ W +     + E +VAL+DPD   L+PL  +++   +T  R  G   +        W+ +G+PAGQ + L   W KW       G   S   +     A ++Y + PPYLAH  D   L  +WVE   + YE  P +L+E  A+  AAA L L H+ + +  V   + + +   W  V+   D +VC     P D           +P   HYCH++R G ++F KRR R  H      CD   L  PP        K+HP  R E+++ R+A RNAF++C  TR +N AL  F+   C
Sbjct:   11 PRHYDDIHIVFSTDCSDYQNWQSLLFFYSAARAGQKGPVTRLASGCSEAQMAELRDVHALMPQ--RHRVHFTPDFSL-DARTGLRYPYYNKPRALRHWLAHAAPPVAEAVVALLDPDMAMLRPLRPYVDDDPETFPRRRGGPGQPPVRGVEPWITEGHPAGQLYALGGAWAKWPDLATIVGSTTSPALSVPLDQAAKHYPVGPPYLAHVRDMAALADKWVEFVARTYEGHPGILSEMYAFCIAAAHLRLPHHVIRSYMVSDPNNRDEDAPWALVEALSDEDVCRALGPPLDALPASA-PIPTLPVVAHYCHVFRAGLYMFGKRR-RGLHGV--FACDAQYLAEPPPHAGALRVKVHPPDRVEQVTRRTAVRNAFMVCALTRLLNEALLDFRQARC 398          
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Match: A0A7S3MDZ4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDZ4_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.390e-63
Identity = 135/402 (33.58%), Postives = 213/402 (52.99%), Query Frame = 3
Query:   36 FSSDCTNYQAWQAVVLFHSAIVSGHTGPITQLISGCSEEEEEEITSRHLAVRHTPKHKLFFTPSFAIKNPQTGEPYPYMNKPNAMQLWFSQIEI---HETIVALIDPDFIFLKPLTTWM--NPKDTVVRGDGLSLEGLKLENGGWVRKGYPAGQRFGL-PNWTK------WDRTKICPGESLCATTTTSTAKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAAAALNLKHYRLNNLAVESEKVDYEMWDPVDNQMDNVCDIGIEPRDTESRDIRSFDRMPHFIHYCHMYRVGQWLFNKRRYRKDHNYDQLQCDTPLLEAPPMDIQDKSFKMHPGARYEEISSRSAKRNAFVLCTATRFVNSALRHFKGRLCAEGQPPNLDQTVRI 1205
            FS+DC+ +Q WQ +++FHSA+     G IT++ SGC + ++ E+T+  L  +  P++ + FTP F     ++ + Y + NKP  +Q W    E      TIV +IDPD I L+P+   +  NP +  +       + +  +    V  G P  Q +GL   W +      ++RT +C   S C  TTTS  ++++ + PPY+  KDD  +L+  W    P+VYE +PSLLAE  AY+ AAA  +L H+ L+NL V +   + E W  +D   DNVC    +P D      +    MP  +HYC  YR G+  F KRR +K+       CD P++   P D+   ++K   G  +  +  R A+RNAF+LC     +N+ + H+K  +C  G+  NLD+T+ +
Sbjct:    1 FSTDCSFFQDWQTLLIFHSAVSVKQKGLITRIASGCDDAKKVELTT--LYKKLYPQYGVHFTPDFKTDG-KSKKKYDFYNKPYGVQHWLVNAEPPVPSGTIVNIIDPDMIILRPMVPQIKGNPANIFMNRFKPETDFIPEK----VAHGMPVAQLYGLGAPWAQKAPHKHFNRTHVCGAGSPCLDTTTSFGEQHFSVGPPYMVEKDDLLKLVNSWTAMVPRVYEKYPSLLAEMYAYSMAAAHTDLPHFTLHNLMVSNVHAEDEGWPWIDQLEDNVC---AKPVDGVLYPTKV---MPSVLHYCQFYRAGEMGFQKRRIKKE----LFSCDQPMMLELPADLGKVNYKNRDG-EHMPLGKREARRNAFMLCALHNSINAMVTHYKSVMCTNGEKVNLDKTINV 384          
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Match: A0A7S2SD89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD89_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.800e-63
Identity = 142/392 (36.22%), Postives = 207/392 (52.81%), Query Frame = 3
Query:   21 DIHVVFSSDCTNYQAWQAVVLFHSAIVSGHTGPITQLISGC-SEEEEEEITSRHLAVRHTPKHKLFFTPSFAIKNPQTGEPYPYMNKPNAMQLWFSQIEIHETIVALIDPDFIFLKPLTTWMNPKDTVVRGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTKWDRTKICPGESLCATTTTSTAKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAAAALNLKHYRLNNLAVESEKVDYEMWDPVDNQMDNVCDIGIEPRDTESRDIRSFDRMPHFIHYCHMYRVGQWLFNKRRYRKDHNYDQLQCDTPLLEAPP-----MDIQDKSFKMHPGARY----EEISSRSAKRNAFVLCTATRFVNSALRHFKGRLC 1163
            +IHV FS+DC  +Q WQ+ +++ SA ++GH GPIT++ SGC S+ +E E+     A +  P  ++ FTP F+    +TG  Y + NKP  +  W +       I+ALIDPD  FL+PLT  +     +V  D +  E L    G    KG PA Q +GL + W +++R  IC   S C   T+  A R + + PPY+ H DDW RL   WV+  PKVYE +P LLAE  AY+ AAA   L H+R+N+L V +     E W  VD+ + +VC   + P    S    +   +P FIH C  Y VG++ F+KR    D       CD   L  PP      ++Q+   ++  G R     EE  +   KRN F++C  T+ +N A+R ++   C
Sbjct:  111 EIHVAFSTDCKAFQDWQSAMVWSSAALAGHIGPITRIASGCASKSQEAELLH---ASKPWPNARVHFTPKFSTDT-KTGREYHFYNKPRGILHWLTHGRPEADIIALIDPDQFFLRPLTPDLAGVPNLVVTDPVKKETLPTRIG----KGAPAAQFYGLGDRWLRFNREYICGAGSPCLEATSRDAWRSFTVGPPYILHVDDWKRLARSWVDFVPKVYEEYPHLLAEMYAYSLAAAHEELPHFRVNHLMVSNVGSYGEGWPLVDS-LPSVCADALRPSSNTSS---AASMLPTFIHACQSYHVGRFRFSKRALPTDKFSS---CDAEFLHEPPETVLSTELQEIVTQIAQGPRRKKTNEEKKAVEEKRNGFMVCMITKLINEAMRVYRKGAC 487          
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Match: A0A7S3HPB4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPB4_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.050e-62
Identity = 148/413 (35.84%), Postives = 217/413 (52.54%), Query Frame = 3
Query:    6 PLGEDDIHVVFSSDCTNYQAWQAVVLFHSAIVSGHTGPITQLISGCSEEEEEEITSRHLAVRHTPKHKLFFTPSFAIKNPQTGEPYPYMNKPNAMQLWFSQIEIH---ETIVALIDPDFIFLKPLTTWMNPKDTVVRGDGLSL---EGLKLEN-GGWVRKGYPAGQRFGL-PNWT-----KWDRTKICPGESLCATTTTSTAKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAAAALNLKHYRLNNLAVESEKVDYEMWDPVDNQMDNVCDIGIEPRDTESRDIRSFDRMPHFIHYCHMYRVGQWLFNKRRYRKDHNYDQLQCDTPLLEAPPMDIQDKSFKMHPGARYEEISSRSAKRNAFVLCTATRFVNSALRHFKGRLCAEGQPPNLDQTVRI 1205
            P  +  +HVVFS+DC+ YQ WQ ++LFHSA V G  G IT++ SGC   ++ E+T+  L  +  PK+   FTP F   + +T + Y + NKP  M+ W           TI+AL+DPD IF++PL     P+   +RGD +SL    G+K E     +  G+P  Q +GL   WT     K++R KIC   S C        + +Y + PPY+AH+ D+ R++  W    P+VYE +P LLAE  AY+ AAA   L H +++N  V + +   E W  VD+ +  VC     P D +         M   IHYC  YRVG+  F KRR    HN     C++P++  PP D+   ++K+  G + E  ++   KR AF LC     +N+AL  +K R+C      N  +T+ I
Sbjct:   81 PEEDGQMHVVFSTDCSGYQNWQTLLLFHSAQVVGQKGRITRIASGCDATQQAELTA--LYKKLYPKYGAHFTPDFK-NDAKTNKKYDFYNKPWGMKHWLENAVPAIPPNTIIALLDPDMIFVRPL----GPQ---IRGD-ISLLTDRGIKDEEIVDVIGLGHPVSQTYGLGAPWTNDNHKKFNRGKICGEGSPCLQVNMRYGELHYSVGPPYIAHRSDFIRIVESWTTFVPRVYEDYPYLLAEMYAYSMAAAHEKLPHVQVDNYMVSNTQAGGESWPHVDS-LPQVC----VPPDEDGHFYAGLP-MTTVIHYCQNYRVGELGFQKRRV--PHNI--FSCESPMMVEPPTDLAAATYKVKSGQKVEMKNALQTKREAFALCVIHSALNAALLDYKKRMCPNDGTTNYAKTLNI 472          
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Match: D8LU90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU90_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 5.560e-62
Identity = 143/409 (34.96%), Postives = 208/409 (50.86%), Query Frame = 3
Query:    6 PLGEDDIHVVFSSDCTNYQAWQAVVLFHSAIVSGHTGPITQLISGCSEEEEEEITSRHLAVRHTPKHKLFFTPSFAIKNPQTGEPYPYMNKPNAMQLWFSQIE--IHETIVALIDPDFIFLKPLTTWMNPKDTVVRGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTKWDR----TKICPGESLCATTTTSTAKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAAAALNLKHYRLNNLAVESEKVD-YEMWDPVDNQMDNVCDIGIEPRDTESRDIRSFDRMPHFIHYCHMYRVGQWLFNKRRYRKDHNYDQLQCDTPLLEAPPMDIQD---KSFKMHPG---------ARYEEISSRSAKRNAFVLCTATRFVNSALRHFKGRLCAEG 1172
            P   DDIHVVFS+DC+ YQ +QA +LFHSA + G  G +T++ SGC+ +E  E+      +R   +  + FTP ++  +P+TGE + + NKPN M  +    +  +HE +VAL+DPD IF+ PLT ++   D ++  DG + EG       WV +G P GQ +GL   WT WD     T+    +S     +T  A   Y + PPY+ H  DW R+L  WV  +PKV++  P +LAE   +  AAA + L+H     L V    +   E W  VD    +VCD        ES D R    +P  +HYC MYRVG +++ KR +R    +    C +  LE PP D         ++HP          A  E + + +  R  + +C   R +N AL  +K R C  G
Sbjct:   77 PASADDIHVVFSTDCSPYQNYQATMLFHSAEMVGQKGRVTRVASGCTRDERLELEV--FMMRQPERFHVHFTPDYSF-DPETGERFMFYNKPNGMAHYLKSADYPVHEAVVALVDPDMIFMSPLTPFVGDADKMLWHDGDAGEGPD-----WVEEGSPVGQYYGLGGVWTTWDDLREITENLGEDSPARAVSTEEAISGYPVGPPYMMHPRDWARVLDLWVALSPKVHKGHPGILAEMYGFCIAAAHIGLRHRVAYGLMVSDAGMPGKEGWPLVDQMGTSVCD-------PESVDHRR-GSLPPIVHYCQMYRVGTFMWGKR-HRTHQTF--FGCHSDSLELPPPDYLAGPMAEVRVHPRRGRAQLGEQAEPERVPAVTGMRQGYAMCAVLRAMNEALVKYKYRYCERG 466          
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Match: A0A7S3ZM89_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZM89_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.570e-60
Identity = 147/398 (36.93%), Postives = 209/398 (52.51%), Query Frame = 3
Query:   24 IHVVFSSDCTNYQAWQAVVLFHSAIVSGHTGPITQLISGCSEEEEEEITSRHLAVRHT-PKHKLFFTPSFAIKNPQTGEPYPYMNKPNAMQLWFSQIEI---HETIVALIDPDFIFLKPLTTWMNPKDTVVRGDGLSLEGLKLEN-GGWVRKGYPAGQRFGL-PNWTKWDRTKICPGESLCATTTTSTAKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAAAALNLKHYRLNNLAVESEKVDYEMWDPVDN-QMDNVCDI--GIEPR--DTESRDIRSFDRMPHFIHYCHMYRVGQWLFNKRRYRKDHNYDQLQCDTPLLEAPPMDIQDKSFKMHP-GARYEEISSRS------AKRNAFVLCTATRFVNSALRHFKGRLC 1163
            + VVFS+DCT YQ WQ+ V+F+SA V GH GP+T++ SGCS E+E  +  R+ A+     +  L  TP F  K+  TG+ Y + NKP  M+ + +   I      I+ALIDPDF FL+P +      D V   D L +   + +    +V +G PAGQ++GL  +W  +DR KIC   S C  T+   A+R+Y + PPY+ H +D+ +L P W E AP+VY  +P LLAE  AY  AAA L + H R+N+  + +  V  E W  +D   + + C    G  P   D  +R +     +P F+HYC  YRVG ++F KRR       D   C  P L AP +      +++HP G    E   R         R A  +C AT  VN+A    + R C
Sbjct:  106 VRVVFSTDCTPYQDWQSEVVFNSADVVGHRGPVTRIASGCSPEKEAALRQRYAALYGARARFSLHVTPEFD-KDSATGKSYHFYNKPRGMEHFLNDRSIDFERAPIIALIDPDFAFLRPFS------DRVAGPDALVIAPWRADELPAFVTEGTPAGQQYGLGTHWLTFDRRKICGAGSPCLETSRRDAERHYPIGPPYVLHHNDFRKLAPVWREFAPRVYAQYPDLLAEMYAYCMAAAHLRMPHARVNHWMLSNVHVGDEGWRHLDALALRDACPARGGKTPNVVDHATRFV-----LPAFLHYCQNYRVGDFIFAKRRVPPALFTD---CAHPPLLAPGLIETQVDYELHPPGNPCREAPQRKPLGRSIVNRTAAAVCLATWHVNAAATRARKRFC 488          
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Match: F0YDA7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA7_AURAN)

HSP 1 Score: 211 bits (538), Expect = 1.710e-58
Identity = 127/392 (32.40%), Postives = 199/392 (50.77%), Query Frame = 3
Query:   18 DDIHVVFSSDCTNYQAWQAVVLFHSAIVSGHTGPITQLISGCSEEEEEEITSRHLAVRHTPKHKLFFTPSFAIKNPQTGEPYPYMNKPNAMQLWFSQIEIH---------ETIVALIDPDFIFLKPLTTWMNPKDTVVRGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTKWDRTKICPGESLCATTTTSTAKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAAAALNLKHYRLNNLAVESEKVDYEMWDPVDNQMDNVCDIGIEPRDTESRDIRSFDRMPHFIHYCHMYRVG----QWLFNKRRYRKDHNYDQLQCDTPLLEAPPMDIQDKS-FKMHPGARYEEISSRSAKRNAFVLCTATRFVNSALRHF 1148
            D+ HVVFS+DC  YQ WQ+ V++HSA ++G  G +T++ SGC++ E  ++ +RH       +  +  TP F+     +G+ Y + NKP  ++ W    + H         + +VALIDPDFIFL+PLT  ++    ++    +            V++G P GQ +GL + W K+D  KIC  +S CA  T++ A RYY + PPY+AH+DD  ++   W E+ P+V+  +P LLAE  AY+ AAA L L H RL++  V +     E W  +D    + CD+ +  R     D+      P F+HYC  YR      + +F KRR   D  +     +     +P    +D    +  P         R  KR A++ C AT  +N+ +  +
Sbjct:   27 DEFHVVFSTDCGKYQDWQSEVVYHSATLAGQPGRVTRIASGCTDAEAAKLRARHAEPDLAGRFLVHLTPHFSTDG-DSGKDYKFYNKPYGLRHWLGAGKGHWLARADLGDDAVVALIDPDFIFLRPLTADVSNASAILASAPVDAAAAAARFRR-VKRGQPVGQFYGLGDGWLKFDLGKICGAKSRCANVTSAEAWRYYSVGPPYIAHRDDLAKIADRWCEYVPRVFAQYPELLAEMYAYSMAAADLGLPHLRLDHYMVSNVNAYGEAWPWIDGAATSSCDVTLPQRLWPGHDV------PVFVHYCQGYRFPDAERELVFGKRRLPHDV-FSSCAGERLPRPSPAEFARDHGDLRAAPAVGPPGRDLRDRKRRAWMFCAATDALNAVVAKY 409          
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Match: W7T637_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T637_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.470e-57
Identity = 136/402 (33.83%), Postives = 209/402 (51.99%), Query Frame = 3
Query:   15 EDDIHVVFSSDCTNYQAWQAVVLFHSAIVSGHTGPITQLISGCSEEEEEEITSRHLAVRHTPKHKLFFTPSFAIKNPQTGEPYPYMNKPNAMQLWFSQIEI---HETIVALIDPDFIFLKPLTTWMNPKDTVVRGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTKWDRTKICPGESLCATTTTSTAKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAAAALNLKHYRLNNLAVESEKVDYEMWDPVDNQMDN-VCDIGIEPRDTESRDIRSFDRMPHFIHYCHMYRVGQWLFNKRRYRKDHNYDQLQCDTPLLEAPPMDIQDKSFKMHPGARYEEISSRSAKRNAFVLCTATRFVNSALRHFKGRLCAEGQPPNLDQTVRI 1205
            +D +++VFS+DC+ YQ WQ++ +F +A      G I ++ SGCSE E++E+  + L      + ++ FTP+F  K+ ++G+ Y + NKP  +Q W          + IVAL+DPDF+F++PLT +   +D V+    ++   L  E    VR+G+P  Q +G+ + WTK+    I   +S  +  + S A RYY +  PY+AH  D  ++   W    P+VYE +P LLAE  AY+ AAA L     RL++  V + +   E W  VD   D  VC      +  E          P F+HYC  YRV  W F+KRR   +       C +PL   PP D++D  +K + G +    S + A+R A++LC   R +N A   FK   C  G   N  Q ++I
Sbjct:   87 DDRLYLVFSTDCSGYQNWQSLAVFFTADAVRQPGTIVRIASGCSEAEKKEV--QKLYDTFPVRFQVHFTPNFK-KDAKSGKSYDFYNKPYGLQHWLDSKAAPKHKDAIVALLDPDFLFMRPLT-YKVKQDRVLYSPPVTDGDLIDE----VREGHPVAQYYGIGSQWTKFKVEYIAGKDSPASKVSISDASRYYSVGAPYIAHVKDMRKIAESWANFVPRVYEEYPHLLAEMYAYSIAAAHLXXXXXRLDHYMVSNTQAAGEGWPFVDRLTDKYVCSAEAPDQGQEQ---------PVFLHYCQFYRVEHWGFHKRRVATN----LFTCKSPLFIMPPEDLEDTHWKDN-GDKKTMYSKQEAQRAAYMLCNVIRKLNGAAVKFKNLNCLAGSA-NYTQEIKI 465          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5758.14164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4L7_ECTSI1.120e-25381.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZI64_9STRA1.120e-6736.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDP3_9STRA2.520e-6435.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3MDZ4_9STRA2.390e-6333.58Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2SD89_9STRA2.800e-6336.22Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3HPB4_9STRA1.050e-6235.84Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
D8LU90_ECTSI5.560e-6234.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3ZM89_9STRA1.570e-6036.93Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
F0YDA7_AURAN1.710e-5832.40Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
W7T637_9STRA3.470e-5733.83Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5758contigL-elsbetiae_contig5758:753..9870 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score559.3
Seed ortholog evalue1.1e-156
Seed eggNOG ortholog2880.D7G4L7
KEGG koko:K20781
KEGG Pathwayko00514,map00514
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMIY@1,2QQG8@2759
CAZyGT96
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_000120.1
Exons11
Model size1870
Cds size942
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816616.8056135-UTR-L-elsbetiae_contig5758:752..8831622816616.8056135-UTR-L-elsbetiae_contig5758:752..883Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5758 753..883 +
1691683687.4909415-UTR-L-elsbetiae_contig5758:752..8831691683687.4909415-UTR-L-elsbetiae_contig5758:752..883Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5758 753..883 +
1622816616.8183298-UTR-L-elsbetiae_contig5758:1464..15811622816616.8183298-UTR-L-elsbetiae_contig5758:1464..1581Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5758 1465..1581 +
1691683687.5045526-UTR-L-elsbetiae_contig5758:1464..15811691683687.5045526-UTR-L-elsbetiae_contig5758:1464..1581Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5758 1465..1581 +
1622816616.83021-UTR-L-elsbetiae_contig5758:2732..27531622816616.83021-UTR-L-elsbetiae_contig5758:2732..2753Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5758 2733..2753 +
1691683687.5150738-UTR-L-elsbetiae_contig5758:2732..27531691683687.5150738-UTR-L-elsbetiae_contig5758:2732..2753Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5758 2733..2753 +
1622816616.9423294-UTR-L-elsbetiae_contig5758:9211..98701622816616.9423294-UTR-L-elsbetiae_contig5758:9211..9870Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5758 9212..9870 +
1691683687.6261604-UTR-L-elsbetiae_contig5758:9211..98701691683687.6261604-UTR-L-elsbetiae_contig5758:9211..9870Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5758 9212..9870 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816616.8407605-CDS-L-elsbetiae_contig5758:2753..27981622816616.8407605-CDS-L-elsbetiae_contig5758:2753..2798Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 2754..2798 +
1691683687.5266352-CDS-L-elsbetiae_contig5758:2753..27981691683687.5266352-CDS-L-elsbetiae_contig5758:2753..2798Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 2754..2798 +
1622816616.8510027-CDS-L-elsbetiae_contig5758:3507..36701622816616.8510027-CDS-L-elsbetiae_contig5758:3507..3670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 3508..3670 +
1691683687.5363495-CDS-L-elsbetiae_contig5758:3507..36701691683687.5363495-CDS-L-elsbetiae_contig5758:3507..3670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 3508..3670 +
1622816616.8607671-CDS-L-elsbetiae_contig5758:4686..47781622816616.8607671-CDS-L-elsbetiae_contig5758:4686..4778Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 4687..4778 +
1691683687.5456555-CDS-L-elsbetiae_contig5758:4686..47781691683687.5456555-CDS-L-elsbetiae_contig5758:4686..4778Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 4687..4778 +
1622816616.8715641-CDS-L-elsbetiae_contig5758:5692..57851622816616.8715641-CDS-L-elsbetiae_contig5758:5692..5785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 5693..5785 +
1691683687.5556936-CDS-L-elsbetiae_contig5758:5692..57851691683687.5556936-CDS-L-elsbetiae_contig5758:5692..5785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 5693..5785 +
1622816616.882608-CDS-L-elsbetiae_contig5758:6156..62701622816616.882608-CDS-L-elsbetiae_contig5758:6156..6270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 6157..6270 +
1691683687.5671742-CDS-L-elsbetiae_contig5758:6156..62701691683687.5671742-CDS-L-elsbetiae_contig5758:6156..6270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 6157..6270 +
1622816616.893054-CDS-L-elsbetiae_contig5758:6630..66971622816616.893054-CDS-L-elsbetiae_contig5758:6630..6697Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 6631..6697 +
1691683687.5798752-CDS-L-elsbetiae_contig5758:6630..66971691683687.5798752-CDS-L-elsbetiae_contig5758:6630..6697Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 6631..6697 +
1622816616.902914-CDS-L-elsbetiae_contig5758:7258..73611622816616.902914-CDS-L-elsbetiae_contig5758:7258..7361Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 7259..7361 +
1691683687.5980392-CDS-L-elsbetiae_contig5758:7258..73611691683687.5980392-CDS-L-elsbetiae_contig5758:7258..7361Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 7259..7361 +
1622816616.9192219-CDS-L-elsbetiae_contig5758:7790..78841622816616.9192219-CDS-L-elsbetiae_contig5758:7790..7884Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 7791..7884 +
1691683687.6085896-CDS-L-elsbetiae_contig5758:7790..78841691683687.6085896-CDS-L-elsbetiae_contig5758:7790..7884Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 7791..7884 +
1622816616.9328458-CDS-L-elsbetiae_contig5758:9040..92111622816616.9328458-CDS-L-elsbetiae_contig5758:9040..9211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 9041..9211 +
1691683687.6171172-CDS-L-elsbetiae_contig5758:9040..92111691683687.6171172-CDS-L-elsbetiae_contig5758:9040..9211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5758 9041..9211 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5758.14164.1prot_L-elsbetiae_contig5758.14164.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5758 2754..9211 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5758.14164.1

>prot_L-elsbetiae_contig5758.14164.1 ID=prot_L-elsbetiae_contig5758.14164.1|Name=mRNA_L-elsbetiae_contig5758.14164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=314bp
MNKPNAMQLWFSQIEIHETIVALIDPDFIFLKPLTTWMNPKDTVVRGDGL
SLEGLKLENGGWVRKGYPAGQRFGLPNWTKWDRTKICPGESLCATTTTST
AKRYYDLIPPYLAHKDDWGRLLPEWVEHAPKVYEAFPSLLAEQTAYATAA
AALNLKHYRLNNLAVESEKVDYEMWDPVDNQMDNVCDIGIEPRDTESRDI
RSFDRMPHFIHYCHMYRVGQWLFNKRRYRKDHNYDQLQCDTPLLEAPPMD
IQDKSFKMHPGARYEEISSRSAKRNAFVLCTATRFVNSALRHFKGRLCAE
GQPPNLDQTVRIA*
back to top

mRNA from alignment at L-elsbetiae_contig5758:753..9870+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5758.14164.1 ID=mRNA_L-elsbetiae_contig5758.14164.1|Name=mRNA_L-elsbetiae_contig5758.14164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9118bp|location=Sequence derived from alignment at L-elsbetiae_contig5758:753..9870+ (Laminarionema elsbetiae ELsaHSoW15)
GCTTCCCGCTCGGGGAGGACGACATCCACGTCGTGTTTTCCTCCGACTGC ACCAACTACCAGGCGTGGCAGGCGGTGGTCTTGTTTCATTCCGCCATCGT CAGCGGCCACACCGGCCCCATAACGCAGCTTGTGAGTTGAATTTTGCATC ACTCGCCGCCTGTGTCCAGTCTGGTTGTCCGGCAGATAGATGCAGTAGTA TCCAGAACAAGTGTGCTGCTCGTCAGAGCATCTACAGTAGTACCGCTGAG ATTGGCTGTGGGGGGTCCCGTAAGTGCACATCCGCCTCGCGCGACCTCAA TCGCCTGCAGCCGCGCGTGGCCTTCGGCAGGCACCCCGACGTGTTTACCG TTTGTTTGAGGCTGGTCCCACGTACGTCTCTCGGAGAGCCCTTCATTTTG CTGTCGGGTCTGCCTGCCTGGCTTGAAAGGGTTCGGGCTGTTGTGTGTTC TGAAGTGCTGCCGTAGTCGGTGTATTGCTCCTTGTCAGTGTTGCATGCCG CACTTGCGGCCGACCGGCTGCAAGCGCAGAAAGGACGGTGGGATTTTCAG TGTACTGCTGTTGCAAGACGGGCATGGTCTTGTCTTCGGACTAGACATGC GCGAGGCTGGTTGGTCCGGCTGCCGGTCCGTGGTGGTTTGTTTTGCCTCT TGTGTACCTATGTGTTTGCGTGTGTGCTCGCGGCCCATCCATGCTTCCTC CGCCCCCAAAAGATAAGCGGGTGCAGCGAGGAGGAGGAGGAGGAGATCAC CTCCAGGCACCTAGCTGTGCGGCACACCCCGAAGCACAAGCTGTTCTTCA CCCCCAGCTTTGCCATCAAGAACCCTCAGGTATGTTGCAGGCTGGCTGAG ATGCTCAAACGTCAGCCACGAGTATCGGATGCCTCGGTGTACTTTTGTGT TTTCCAGTGTGGCCTGCGTTGTCGTCTGCCGGTCGACGGTGTACAGCAAG GCTTGAAAGGTGAAAATGTGAAAATGTGACGGTTTCAAAAACTCTGGGCT GGCTGATGAGTTGGACCTGTTGCTGCTGCGGTTCCATCATCACCAGAGCG GTCGGCCACAACCCGCGACACCGTCGCAGAAGCCTAGCCTATGCATGGCG TGCGCGAATTCCGCGTCCTTGAAAACCACTGCCCTACCGTAGGTGACACA AGATACCACACCCCCTGGACCGAATTTTACAGCTCCATTACTCCGTCACG AAGAGGGTGCCGACACCAAACGACACGTTTTCGGACAGCCCTGGACTAGA TCTTTCCAACGCCACCCCTTTCGGTACTGGCACTCTTCTTGCTGGGGAGG AATCGAGCTTTGAAAACCTGTCCAAGGGGTGTGGTATCTTGTGTCCCCTA CGGATGGCACAAGTAACCACCACACCGCTCGGGCTCACCTTTTTATAACA GCGTGTGCAAGGAAGATTACCTCTTGGGCGAACGCTTAATTTTGCCGGTC CTCGGGTAGAACACGATCGCTGGGAGAGGGTGCAAAGCAGCATCGATCTG GGCGAAGCCAAGCAGTACATCTTGACACCTAGTATTTACCATACAAGGTA TCTCATATCGTTCGCCTTAGCCTTAACCTGGTTCCATGACGTCACTGACA CTGTTCCCGAGGTTTGTTACGGTAGCGCCTTGGAGCATCCGGGCATAAAA AAATGAAAAGCTGTTGGTGTGTGTGTGGTGTTTTGTACGCTGGTGCCCTC GTTGGTGTCGAAGTTGCGTTTGTTGCTGCCAATCACCGAAGTTTCATGTT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT GTTTCTCTCTCTCTGTTTCTCTGCCCCTCCCTCTTTCTTTCTCTCTTTCC CCGCCTTTCCCCCTTACCCTTCCGGCCTCCTCCTTGCCCCCAACACCCAC TCTTTTGTCGATCGGAATGGGTGCGCCGCCCTGTTGTGTTTTATTGCTTT TGCGTTTTCCTTCGTGTTTCTCATCTCAAGACCGGGGAGCCGTACCCGTA CATGAACAAGCCCAACGCCATGCAGCTCTGGTTTTCCCAGATCGAGGTAA GTTGTAACTTCATATATATGGTAGGCGACGAATAAGCCAATCATGGGAGG AACAAAAAAAACACGTTGCACTTCCCTCTCGGGGGTATTTAACCCTAGTT ACTAGTGAAGAGTGTCAGGTTTAGCAACGCTCACTTCTTGAGGAACTCCT TGTGTGAGCGGTTGCAATAGGGTGTTGGGGCAAATGGGGGTACATCTACG GTCTATTTTTTTTGCGCACCACAATTCTACAATTGTGCATTGGATATACC AGTAAATAGTGCGTATGGTACTCTTCTTGTTGTGTTCGGCATGTGTCGTT CATAGCCTACTGTGTCTTAGAGCAGGGCACGGTCCCAGGCCTGCGTCGGC ACTATCACCGACTGCTGTTAAGCATTCCTGAAGGGAGGGTCGGTATCTTT TTACGGTCTTGGTCGTTCGGTATCCCTCTGGCGGGTAGCGCCGTCGTGTC GTACAGAACGCAAGGTATTTCGCTTCGTCGCCACCCTCTGAGAGCCTGGA TACACGGCGTGAATTACAATGCAAGCACGGGTTGCATTGTCTCGACGAAA GTCAACTCCTTGTCCGGTTTGTTCTCGTATTCTACTCGGGATCGACGTAC AAGTAGCAGTCATTTTTTTTTTACATATTTTTGATTTTTGATTTTTTTTT TTTTATATTTTGCTCCGTTTCGTCTCTCGGCTGCACATCCTACGATAACT TGCAGATCCACGAGACAATCGTGGCCTTGATAGACCCCGACTTTATCTTC CTCAAGCCGCTGACGACCTGGATGAACCCCAAGGATACCGTGGTGAGAGG TGACGGCCTCAGCTTGGAAGGGCTCAAGCTGGAGAACGGCGGCTGGGTGC GCAAGGGTTACCCCGCCGGTGAGTTGAGACAGGGCAGACAGACAGGCAGG CGGACACCCGGGCGGCTGGCACGATTCGAAGGGCATGCGCAGGTGTGCTC TGTTGTCGACAGCGTGTGCAGGCAGTGTGGCGTCGGTCAACACGGCAGGC TGCTCCTGTGGTGGCGTTATGCAGTCGTGTATGCGACGACGCGCCAAATA GGCGTACGCCTGTCTGTTCCACAAGGTGGTGCTGCTGCACCGAACTGTAC CGTACCGTACCGAACCGATTCCCAAGCTGATCAAGATGTCCCACGGACGG CATATGGCTGCAAGGTTTCGGCGGTATGTACCGGCGAACTGGAGCGGAAG AAACGATGCCCGTGAAGAGATACGAGATGGCGAGCTGTCTCTGAACAGCT AAATGCAGTATCACTACAGCTGAATGCCACAAAAGTCGTTCCGTACCTGC CGGCATCCCAGCCACCCCTGCCATCGAGCCGAGCAGAGAAGGATGCGCAC GCACAAGGGCAGACGCGTGGTCTTTGGCTTGACTGGGCGTGCTTTTGGCG TAAAACGCACCAGCACCACCTTTCATTTATTTTCATTATTCAGTAGTCAG ACTACACCCTTTTTTAGCGTAAGTTATCCTGTGACCACGGGAATCGACCG CGTCAGTGTCGGATTAGTACGGACTCATGGAGGTGTGCTGGATAGAGAGA TGGGAATGTTTTTTCTTTCAATGGGAAGACAACAACCAGCGCCACCGGCG CGTTTGATCTGTGTGCTGGCTGCTCTTGTTTAAAAATAAACAAAGAATCG AAGATGGAACCTAACCCACACTAGAGCAAAGACTCGATATGGGGTTCAAG CGGTATTCCATACAGAGACGTAATATTTGGCGAAGCGAGCAGAAAAACAA CCTAAATATCAGAAGAGTTCAACATCTCCCCTGCAAAGATTTAAGATTTG CGAGGTCGGCCAACAATTATTCCGGCGGGTAGAGCCCACCTTGTTTGCTC CGCTCCTGGCGGCGCTGTCGGTCCGGCCCTGCAGGCCAACGATTCGGGCT CCCAAACTGGACAAAATGGGACAGGACCAAGATCTGCCCGGGCGAATCGC TCTGCGCGACGACGACTACCTCTACGGTGAGCAAATAGGTTACATACATG CCTCAGGAGGGGGTCGGTTCACCCCCCCCCCCGTCCTGTGTGACGGGACC CCGGTTGGGTCATCTAGCTATTTTTTAGTCGTGGTGGAGGAAGGGGGGCA GTGGGGGCAGACGACGAATAAGCCAATGATGGGAGGGAAAAAAGAAATCT ATATATATAACTGACCCTTTCTGGACCCTCCCTGTCTGCGTTGGTGTTGC CCTTTTCGGCCTCTTTTTCGTCGCACTATGTTATTCAAGTGCTGGGTTGT ACGTACATGGTTCTGGTGCACGCCTGGCACTGGTGGCGAACGTATCCGCT GTAGCTTTGCTGCTTGTTTTGGATTAGGGTTGTTCGAAGAAATGCTGAGT TGGGTTTGGTGTGCCTTGGTGGTTGTGTGGCATGCCTTGCCCGTTTTTGT GAACCGCACATCGCGTCCAGATATGGTAGTACCGCCACTGAACTTGTTTC CTTAGACGTCGACTCTCTCCCTGCACTGGTCTTGGGTCGTGCGCGTATTT TGTGTCGCGGTTGTGCGCTGCACTGCTGCCGGTCCAGCATCTTCATGTGT ATATCTTGTTACTTGTGTGCCTAAATTTGGCCGATGGTTCCCCCGGTGGC ACGACCCTTTTCTCACATCGCCTTTCCTGGCTCAACCTTCGACCGGTTCG TGATTTGTGATTCGTGGCGCTATTTATTCGTAATTTACAGTATCGAGGTT GTTTCTACATACGATTCGTGGCGCTGGCGAAGGAATACCCCGCCTCGCTC TCCCCCCACGACACCCCCCCTGTTCCTGCACCTCGTTGCATCGTTTCAGA TTTGCAGCACGAGATGTCCCGCCGTTGTTTGCTTTGTGAATGACGTCACC GCATGGATTCGTGGAATGTCTCATGTTTTCATGACCCCAGGCGAAGCGGT ACTACGACCTCATACCTCCCTACCTAGCGCACAAGGATGACTGGGGGAGG CTGTTGCCGGAGTGGGTGGAACATGCCCCGAAGGTAAGTAAACACCGGCC CCCCTGCTGCTGTTGTTGCTGCTCCTGTTGAGATACTGCCGCTGTTGTTG TTGCTTGTGCTGGCTTAACGCTTGGTTTGCCTTCCCCTTTTCCTGAAGGA GAGTTCATGTAAATCTACCTGCATGGGCGTCTTTTGTTCTAGATCAAGAT TTAAGACTACTGCTGTGTGGCAGCGGTTCATCTTTCCTCTTGAGTCGATG GCTGCTGCTTCTGCGTTTGGCCACGCTTTTCGGGATTGCACGCTTAAGGC GTCCACCAACGCCGTATCTTTTCACGCCTCCCGCTGTCTTTCGTCTCTGT GTTTCTTTCCCTCCCCTCCCCTTTTTGTTTTCATGGAACATGGCGGGGGG ACAGGTTTATGAGGCGTTCCCTTCCCTGCTGGCGGAACAGACGGCGTATG CCACTGCGGCGGCGGCCCTCAACCTGAAGCACTACCGCCTCAACAACCTC GCCGTCGAAAGCGAAAAGGTGAAAATACTGCTGTAGCATGACCGGTTGCA CACAGACGCACTCCCCCGACCATATTCGTAGAGATCCCACCCGGAGCGCG AAGTGCGCGCTGGGTGCTTGATTTTCGTGGGTTCAGGCCCTGCTGCGATG CAAGCGTAGTTGTCTGTTTTCCTTTTGCGTGTTCGTCGCGACGCCTCGGT CACAGGTAGAGTAGTCCTACAAGTATTGATATCCCGCTGGGGTGCTGTGC TGTGTAGTGTTGTTTGGTCGTCAGGCCGTAACCGTCAAAACGTAACCGTA ACCGTCTGCCGACCCGCCCTGGTCTTTTCCCGTTTTTTTTTCTCTCTTGT TCTGTTCTGGTCTCTCCACGCATAAAAGGTGGACTACGAGATGTGGGATC CGGTAGACAACCAGATGGACAACGTGTGCGACATCGGCATCGAGCGTGAG TTTGTGATGAGTTGGACCCTAGTTCGGAGCTGGTTCTCTAGGTTGCTTGA GCAAGTTGACGCGCTTTCACCCCCCCAAACGCAAAGGTCGTGCACGACCT TTCCGTTTTTGACGTTAAATAGTGGGTGTCCATCCCAACAACAGAGCAAA GTTGCGTCGCCCAAAAGTCAACACATGCCCTTCCCTGGAGCTTGTTGTCG TCTTCACGCATTAAAAACCGTTCCGGTATCTCTATCCAGTACCACTTCCA TGACCGCCATGAGTGTGTGCCTCTTTTTTGTTATTGTCACGAACAAGGGG GGGTATGCGGAGGGAGCTGGACGGAGCCCCCGTTCTCGGGCCAATCGCTC AAATCAGCTTTGTCCGCTTGTAGACGCCCTTTTATTTCCATGTTATGTTT TGCCCCCAAGTAGGAGTCCCCGAAGTCACAGCCCCTTGCTGATCACGTAC GAAAATCTGGTATTTGATCCGTTTTGTCTCTACCAAGTATGCACAATAGT TCAGTTTTGTTTTTTGCTTTTTTGTGTGATTGTGTGCCTTCCGCCGTCTC CGCCAGCCCGAGACACGGAGAGCCGCGACATCCGATCATTCGACAGAATG CCACACTTCATCCACTACTGCCACATGTACCGCGTGGGGCAGTGGCTCTT CAATAAGCGGTGAGGAAGCAGGCGCTGCGCGGACAAAAAACTGGATAATG TTACAGCAGTTTTTTTCTGCTAGATACGTCCAACATCACCAACAACGTCG TTTCTCCTTTCTTTTGGTGCACGTTGGCAAGGTAATGTAGGCTAGGGCCG TGGACGGGACTCGACGCCAGAATTCTCCCCCATCACACGGGATACTCCTT TACTCCTCGAAGGGTGTGTGTATTTTGGCTTGTGCTTAGCAGTTTCGACC CCACACGACGCCTGGGGCTACATCCTCGAAATAAGCGCGTTTTCGGCTGC TGTGGTTGACAGTTTTGAGCTCACAGCACCCGGGCCTAGAAGGAACAAAC TTACAGCCCTCTAAAGGTATTGCATGGCGACTAGACGGACCAAACGACCA CGCCTGTTCGTTTGACCTTTGCTCGACCTTGTCCCAAGGCGGTACCGCAA GGATCACAACTACGACCAGCTGCAGTGCGACACGCCGCTTCTCGAGGCGC CTCCCATGGACATTCAAGATAAATCCTTCAAGGTGAGAGACGCGAGAGAG CACGCGCGTGTCAGCGGCAGCCCGCGCACTTTCCGCCGCAACGCCACGAG CAACAGCAGCGGCAGCAAAGGGATTGGCCATTGCCAAGTCCATTTCGAGG GGCATGTTTGCCACCACTGAGCTGGCGCTGACCAGATTCCATCCGGTCCC ATCTCACCCCTCGTGGAAGGCGTCTGGCTGCTTTGCGGTTTACGTTTGGT TGCGATCCGTGTTCGTATACGATCCACAACAGGTTTAGAGATTACTTGAC CGGTACGGATACTACTGTACGAAAATCCAATGCCGTCCCCAATACGCACT GCTGCGTTATTTTGTGCTCGATTTTCTGTTGTACTCTACTACTGTGTTGT GGAGTATTGTTTTGGATTGGATTGGATTGGATTGGACTGGATTATATTGG AGCAATACGTTTGCGTTTCCTGGTGGCGTGTCGGCGGAGGTTGTTTGTTT CCCTTTGCCGACGCATCTGTCGTTGTCTGTTCTGTTGGCGTCGAGACGGA AATGCGACAAAGCCCTACACACACACACACACACACACACACACACACAC AACACACACACACACACACACACACACACACACACACACACACACACGTG GGGCTTTTCGCGGCGATCCATACTCCTATTACATACAAGTATTATCTTTG ATTTTCTCTTATTTTTTCCGCTCGTGATTCATGGATCCCCCCCCCCTCTT TTCCCGCAGAACGTGTTGGGAGTGGCTTTTCTTGTACCGGTACGAAGGCG TTAAAGTATAGAAGGACCCGTGAGCGAGTTGAACATGTCGCCATGGAAGG CGTAGCGTTTGGGCGAAGGTCCAACCCGTCTTGTATTGTCTTGTCGCACA CACTGTATCACGCATTTACGCTCTGTGTACCGGATTTCGTGTAACCGTAG ACAGCCATTTACCCGGCATGCATCATGTCGGGCATGCTTGTACTAGCTGT ACTGGGCTGGGATTGTGCTTCCACGCCGCGTCGATTCTCTCATTGCGTAC ACACCCACCCATGTACGTGGTTCGACTTTATGTTGAGTTCGTCGTTTTTG TGTTTACGCGCATGGTACAAGCGCACCCCGGTCTAACGATGTTTTGCCGC CTTCTCATCTGCCGCTTGATGTGTGCGGTATATCTCAGATGCACCCCGGG GCCCGCTACGAGGAAATCAGCTCGAGGTCGGCGAAGCGTAACGCCTTCGT GCTCTGCACCGCAACTCGCTTTGTCAACAGCGCCCTGCGACACTTTAAGG GGAGGCTGTGCGCGGAAGGACAGCCCCCGAACCTCGACCAGACTGTGCGC ATAGCATAGCATAGCACAGCCAAGAGCTTGCTAGATAGTGTACGTATTTA TGGCACCGCGAGGTTGAATCACTCAGTTTCTTTCAACTTTTGTTCTGCGA CGGGGCGTAGATATGTAGCGTACGTGGTACCTCGTATAACTTCGCGCCCT CGAGGGATTCGTGGACTAGCAGACAGTTGTGGACTAGCAGGGGTTGGACC TGCTCCTTCATGGAGACGGTGCGCGCGTCGTTCGGGGAAAAGTCATGCTT AACTATAAATTAATGTTGTAATTTGTTTTCACCGAAAACATGTTTGGGCC AGTCTTCAAAGGCTTGGCTTTGTTGTTGCTTCATATGTCGCGCCGATACC CTCCCAGTTGAATAACCCCATAACGCTGCCCAATTTTCTTCGTCCCGGGG TGGGCCCGTGGAGGCAAAGAGGCCGCTTCTGAGTTGTCGGGTGTGATCGA ATTACGGAGTAGTCTATGTCTCAACATACCGGGGGGTGGATGCCACTATT ATGTTCGCCTGAGATCGGAAACCCTGAGTGTCTGGCGCCGATTTTGAAGC AGTGTTGACCCTTTTCCAAATGCTCTTTCGACTATGTATCTATGTATGTA ACCATCCGTCAGAATTGGATGTGGTATCTTAAGTCTTGGGGCTATAATTA CACGCCAAACCAAGCGCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5758:753..9870+

>mRNA_L-elsbetiae_contig5758.14164.1 ID=mRNA_L-elsbetiae_contig5758.14164.1|Name=mRNA_L-elsbetiae_contig5758.14164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1884bp|location=Sequence derived from alignment at L-elsbetiae_contig5758:753..9870+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACAAGCCCAACGCCATGCAGCTCTGGTTTTCCCAGATCGAGATGAA
CAAGCCCAACGCCATGCAGCTCTGGTTTTCCCAGATCGAGATCCACGAGA
CAATCGTGGCCTTGATAGACCCCGACTTTATCTTCCTCAAGCCGCTGACG
ACCTGGATGAACCCCAAGGATACCGTGGTGAGAGGTGACGGCCTCAGCTT
GGAAGGGCTCAAGCTGGAGAACGGCGGCTGGGTGCGCAAGGGTTACCCCG
CCGATCCACGAGACAATCGTGGCCTTGATAGACCCCGACTTTATCTTCCT
CAAGCCGCTGACGACCTGGATGAACCCCAAGGATACCGTGGTGAGAGGTG
ACGGCCTCAGCTTGGAAGGGCTCAAGCTGGAGAACGGCGGCTGGGTGCGC
AAGGGTTACCCCGCCGGCCAACGATTCGGGCTCCCAAACTGGACAAAATG
GGACAGGACCAAGATCTGCCCGGGCGAATCGCTCTGCGCGACGACGACTA
CCTCTACGGCCAACGATTCGGGCTCCCAAACTGGACAAAATGGGACAGGA
CCAAGATCTGCCCGGGCGAATCGCTCTGCGCGACGACGACTACCTCTACG
GCGAAGCGGTACTACGACCTCATACCTCCCTACCTAGCGCACAAGGATGA
CTGGGGGAGGCTGTTGCCGGAGTGGGTGGAACATGCCCCGAAGGCGAAGC
GGTACTACGACCTCATACCTCCCTACCTAGCGCACAAGGATGACTGGGGG
AGGCTGTTGCCGGAGTGGGTGGAACATGCCCCGAAGGTTTATGAGGCGTT
CCCTTCCCTGCTGGCGGAACAGACGGCGTATGCCACTGCGGCGGCGGCCC
TCAACCTGAAGCACTACCGCCTCAACAACCTCGCCGTCGAAAGCGAAAAG
GTTTATGAGGCGTTCCCTTCCCTGCTGGCGGAACAGACGGCGTATGCCAC
TGCGGCGGCGGCCCTCAACCTGAAGCACTACCGCCTCAACAACCTCGCCG
TCGAAAGCGAAAAGGTGGACTACGAGATGTGGGATCCGGTAGACAACCAG
ATGGACAACGTGTGCGACATCGGCATCGAGCGTGGACTACGAGATGTGGG
ATCCGGTAGACAACCAGATGGACAACGTGTGCGACATCGGCATCGAGCCC
CGAGACACGGAGAGCCGCGACATCCGATCATTCGACAGAATGCCACACTT
CATCCACTACTGCCACATGTACCGCGTGGGGCAGTGGCTCTTCAATAAGC
GCCCGAGACACGGAGAGCCGCGACATCCGATCATTCGACAGAATGCCACA
CTTCATCCACTACTGCCACATGTACCGCGTGGGGCAGTGGCTCTTCAATA
AGCGGCGGTACCGCAAGGATCACAACTACGACCAGCTGCAGTGCGACACG
CCGCTTCTCGAGGCGCCTCCCATGGACATTCAAGATAAATCCTTCAAGGC
GGTACCGCAAGGATCACAACTACGACCAGCTGCAGTGCGACACGCCGCTT
CTCGAGGCGCCTCCCATGGACATTCAAGATAAATCCTTCAAGATGCACCC
CGGGGCCCGCTACGAGGAAATCAGCTCGAGGTCGGCGAAGCGTAACGCCT
TCGTGCTCTGCACCGCAACTCGCTTTGTCAACAGCGCCCTGCGACACTTT
AAGGGGAGGCTGTGCGCGGAAGGACAGCCCCCGAACCTCGACCAGACTGT
GCGCATAGCATAGATGCACCCCGGGGCCCGCTACGAGGAAATCAGCTCGA
GGTCGGCGAAGCGTAACGCCTTCGTGCTCTGCACCGCAACTCGCTTTGTC
AACAGCGCCCTGCGACACTTTAAGGGGAGGCTGTGCGCGGAAGGACAGCC
CCCGAACCTCGACCAGACTGTGCGCATAGCATAG
back to top