mRNA_L-elsbetiae_contig5755.14160.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Match: A0A6H5LD91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD91_9PHAE) HSP 1 Score: 166 bits (419), Expect = 5.780e-44 Identity = 83/144 (57.64%), Postives = 106/144 (73.61%), Query Frame = 3 Query: 360 VIAELLKGRNNGILLRGDIQRVAEMFMSNRYTISALWKEYQQRKGAGEVSPDLRNKRRGNSGRKGIDLDSLREALKEIPIKNRTTQRAVAAALGIPKSTLQRNFKKLGLSVVSRYLKPFLTDNGKKQRLEWALRWTVQSAGGSH 791 ++AELLKG NNG L GD++RV ++ T+S WK Y Q+K AGE PDL NKR+GNSG+KG+D+ +L+EAL++I +KNRTT R++AAALGIPKSTL N LGL SR+LKP L+D+ K QRL WALRW SAG +H Sbjct: 1 MVAELLKGSNNGALSHGDVKRVVAIYKQTPKTVSKYWKLYNQKKEAGEEDPDLHNKRKGNSGQKGLDIATLKEALQDIHLKNRTTIRSIAAALGIPKSTLFDNLNNLGLRSCSRFLKPLLSDDWKAQRLAWALRWVRSSAGDAH 144
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Match: A0A6H5L9I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9I0_9PHAE) HSP 1 Score: 127 bits (318), Expect = 6.890e-30 Identity = 68/145 (46.90%), Postives = 92/145 (63.45%), Query Frame = 3 Query: 291 MASAQNVAETPKRKNLNGDERNAVIAELLKGRNNGILLRGDIQRVAEMFMSNRYTISALWKEYQQRKGAGEVSPDLRNKRRGNSGRKGIDLDSLREALKEIPIKNRTTQRAVAAALGIPKSTLQRNFKKLGLSVVSRYLKPFLTD 725 M++A + ++ KRKN N E+ VI LL G NG+L G + AE F + T LW+ Y + AG SP L N+R GNSGRKG+ ++ LRE L++IP+ +RTTQR +AAAL IP +TL +N K LGL S +KP+LTD Sbjct: 1 MSAAGSASQVAKRKNFNNSEKEEVIRHLLTGSKNGVLPYGAFKAAAEKFGCHWETNKRLWRRYDTQHKAGVSSPQLANRRNGNSGRKGVPIEELRERLRDIPLNDRTTQRRLAAALEIPLTTLHKNLKALGLRAHSNAIKPYLTD 145
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Match: A0A6H5K5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M0_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.750e-27 Identity = 64/132 (48.48%), Postives = 88/132 (66.67%), Query Frame = 3 Query: 291 MASAQNVAETPKRKNLNGDERNAVIAELLKGRNNGILLRGDIQRVAEMFMSNRYTISALWKEYQQRKGAGEVSPDLRNKRRGNSGRKGIDLDSLREALKEIPIKNRTTQRAVAAALGIPKSTLQRNFKKLGL 686 M++A + ++ KRKN N ER VI LL +G+L G Q AE + + TI +W +++QR+ AG+ S + N R+GNSGRKGIDL+ LR L++IP+ RTTQR +AAALGIP+ TL RN +KLGL Sbjct: 1 MSAAGSASQGTKRKNFNALEREEVIRHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLEKLGL 132
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Match: A0A6H5KHK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK2_9PHAE) HSP 1 Score: 115 bits (288), Expect = 2.300e-26 Identity = 68/144 (47.22%), Postives = 87/144 (60.42%), Query Frame = 3 Query: 291 MASAQNVAETPKRKNLNGDERNAVIAELLKGRNNGILLRGDIQRVAEMFMSNRYTISALWKEYQQRKGAGEVSPDLRNKRRGNSGRKGIDLDSLREALKEIPIKNRTTQRAVAAALGIPKSTLQRNFKKLGLSVVSRYL-KPFL 719 M +A + ++ KRKN N +E VI LL G NG+L G + E F TI LW Y + AG SP + N+R+GNSGR+GI L+ L+E ++IP+ RTTQR +AAAL IPKSTL RN K LGL S L KP+L Sbjct: 1 MPAAGSASQVAKRKNFNEEETEEVIRYLLPGSKNGVLRYGAFKEAGEKFGWYWETIKRLWMRYDTQHKAGVASPQIDNRRKGNSGRQGIPLEELKERPRDIPLNERTTQRRLAAALVIPKSTLHRNLKALGLRAHSNALIKPYL 144
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Match: A0A6H5KRW0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW0_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.700e-23 Identity = 59/132 (44.70%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 291 MASAQNVAETPKRKNLNGDERNAVIAELLKGRNNGILLRGDIQRVAEMFMSNRYTISALWKEYQQRKGAGEVSPDLRNKRRGNSGRKGIDLDSLREALKEIPIKNRTTQRAVAAALGIPKSTLQRNFKKLGL 686 M++A + ++ KRKN N ER V+ LL +G+ G R AE + + TI +W+++++R+ +G+ S + N R+G+SG KGID+++LR L EIP+ RTTQR +AAALGIPKSTL N K LGL Sbjct: 1 MSAAGSASQGLKRKNFNVSEREEVVRYLLADSEDGVRQHGSYHRAAEKYGCHWETIKRIWQKHEKREESGDPSLYIGNDRKGHSGCKGIDIENLRARLLEIPLNERTTQRRLAAALGIPKSTLHNNLKALGL 132
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Match: A0A6H5KLV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV4_9PHAE) HSP 1 Score: 107 bits (268), Expect = 9.030e-22 Identity = 59/132 (44.70%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 291 MASAQNVAETPKRKNLNGDERNAVIAELLKGRNNGILLRGDIQRVAEMFMSNRYTISALWKEYQQRKGAGEVSPDLRNKRRGNSGRKGIDLDSLREALKEIPIKNRTTQRAVAAALGIPKSTLQRNFKKLGL 686 M++A + ++ KRKN N ER V+ LL +G+ G R AE + + TI +W+++++R+ +G+ S + N R+G+SG KGID+++LR L EIP+ RTTQR +AAALGIPKSTL N K LGL Sbjct: 1 MSAAGSASQGLKRKNFNVSEREEVVRYLLADSEDGVRQHGSYHRAAEKYGCHWETIKRIWQKHEKREESGDPSLYIGNDRKGHSGCKGIDIENLRARLLEIPLNERTTQRRLAAALGIPKSTLHNNLKALGL 132
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Match: W4H8J1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8J1_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.410e-20 Identity = 64/177 (36.16%), Postives = 99/177 (55.93%), Query Frame = 3 Query: 327 RKNLNGDERNAVIAELLKGRNNGILLRGDIQRVAEMFMSNRYTISALWKEYQQRKGAGEVSPDLRNKRRGNSGRKGIDL-DSLREALKEIPIKNRTTQRAVAAALGIPKSTLQRNFKKLGLSVV-SRYLKPFLTDNGKKQRLEWALRWTVQSAGGSHKFHHFEDHVHLDEKWFYLVK 851 RK+L+ R LL +G+L RG + +A+MF + TIS LW + + G + D+ +K +GNSGR + D + A++ +P R T R+++AA GIP +T+ + KK S S Y+KP LT ++RL++A+ + G H F+ D+VH+DEKWFYL K Sbjct: 451 RKHLSFAHRRTAYETLLSVAVDGVLPRGALTELAQMFRCHPQTISRLWTQARLSLRGGHCAADVASKTKGNSGRHALRTSDEIEAAIRNVPQMQRQTLRSLSAACGIPMTTIFSHMKKNPRSKARSNYVKPHLTPANIEERLKFAMSFVRPLPSGRHLFNDMHDYVHVDEKWFYLTK 627
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Match: A0A6A4Z2A3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2A3_9STRA) HSP 1 Score: 104 bits (260), Expect = 5.510e-20 Identity = 63/177 (35.59%), Postives = 98/177 (55.37%), Query Frame = 3 Query: 327 RKNLNGDERNAVIAELLKGRNNGILLRGDIQRVAEMFMSNRYTISALWKEYQQRKGAGEVSPDLRNKRRGNSGRKGIDL-DSLREALKEIPIKNRTTQRAVAAALGIPKSTLQRNFKKLG-LSVVSRYLKPFLTDNGKKQRLEWALRWTVQSAGGSHKFHHFEDHVHLDEKWFYLVK 851 RK+L+ R LL +G+L RG + +A+MF + TIS LW + + G + D+ +K +GNSGR + D + A++ +P R T R+++AA GIP +T+ R+ KK S Y+KP LT ++RL++A+ + G H F ++VH+DEKWFYL K Sbjct: 53 RKHLSFAHRRTAYETLLSVAVDGVLPRGALTELAQMFRCHPRTISRLWTQARLSLRGGHCAADVASKTKGNSGRHALRTSDEIEAAIRNVPQMQRQTLRSLSAACGIPMTTIFRHMKKNPRFKARSNYVKPHLTPANIEERLKFAMSFVRPLPSGRHLFDDMHNYVHVDEKWFYLTK 229
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Match: W4G031_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G031_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.070e-19 Identity = 61/177 (34.46%), Postives = 97/177 (54.80%), Query Frame = 3 Query: 327 RKNLNGDERNAVIAELLKGRNNGILLRGDIQRVAEMFMSNRYTISALWKEYQQRKGAGEVSPDLRNKRRGNSGRKGIDL-DSLREALKEIPIKNRTTQRAVAAALGIPKSTLQRNFKKLG-LSVVSRYLKPFLTDNGKKQRLEWALRWTVQSAGGSHKFHHFEDHVHLDEKWFYLVK 851 RK+L+ R LL + +L RG + +A+MF + TIS LW + + G + D+ +K +GNSGR + D + A++ + R T R+++AA GIP +T+ + KK S Y+KP LT ++RL++A+ + G H F+ D+VH+DEKWFYL+K Sbjct: 23 RKHLSFAHRRTAYETLLSVAVDDVLPRGALTELAQMFSCHPRTISRLWTQVRLSLRGGHCAADVASKTKGNSGRHALRTSDEIEAAIRNVLQMQRQTLRSLSAAYGIPMTTIFSHMKKNPRFKARSNYVKPHLTPANIEERLKFAMSFVRPLPSGRHLFNDMHDYVHVDEKWFYLMK 199
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Match: A0A6P6TEQ3_COFAR (uncharacterized protein LOC113700698 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6TEQ3_COFAR) HSP 1 Score: 101 bits (251), Expect = 8.730e-19 Identity = 67/191 (35.08%), Postives = 103/191 (53.93%), Query Frame = 3 Query: 291 MASAQNVAETPKRKNLNGDERNAVIAELLKGRNNGILLRGDIQRVAEMFMSNRYTISALWKEYQQRKGAGEVSPDLRNKRRGNSGRKGIDLDSLREALKEIPIKNRTTQRAVAAALGIPKSTLQRNFKKLGLSVVSRYLKPFLTDNGKKQRLEWALRWTVQSAGGSH-KFHHFEDHVHLDEKWFYLVKNVQ 860 +A+++N + K+KN + A+ LLK NG L +G I RVAE F + ++S +W E + A P+L K GRK I ++ E +K+IP + RT R++A AL + KS+L R K+ L S +KP+L+ + KK RL++ L + S F + D +H+DEKWFY+ K Q Sbjct: 81 IAASENTRQPMKKKNFTTALKRAIYEMLLKECENGKLSKGVISRVAECFDISTRSVSRIWHEGKCTATAYGHLPNLSPKLVKRVGRKKIQVNL--EDIKDIPFRRRTNIRSLAKALDVSKSSLHRRIKEESLRPHSNPVKPYLSTDSKKARLQFCLSMISEGTLASKFSFDNMHDRIHIDEKWFYMSKTSQ 269 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5755.14160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5755.14160.1 >prot_L-elsbetiae_contig5755.14160.1 ID=prot_L-elsbetiae_contig5755.14160.1|Name=mRNA_L-elsbetiae_contig5755.14160.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp MASAQNVAETPKRKNLNGDERNAVIAELLKGRNNGILLRGDIQRVAEMFMback to top mRNA from alignment at L-elsbetiae_contig5755:1297..3484+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5755.14160.1 ID=mRNA_L-elsbetiae_contig5755.14160.1|Name=mRNA_L-elsbetiae_contig5755.14160.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2188bp|location=Sequence derived from alignment at L-elsbetiae_contig5755:1297..3484+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5755:1297..3484+ >mRNA_L-elsbetiae_contig5755.14160.1 ID=mRNA_L-elsbetiae_contig5755.14160.1|Name=mRNA_L-elsbetiae_contig5755.14160.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1284bp|location=Sequence derived from alignment at L-elsbetiae_contig5755:1297..3484+ (Laminarionema elsbetiae ELsaHSoW15)back to top |