mRNA_L-elsbetiae_contig5744.14143.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Match: A0A6H5L120_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L120_9PHAE) HSP 1 Score: 410 bits (1053), Expect = 3.340e-126 Identity = 289/467 (61.88%), Postives = 309/467 (66.17%), Query Frame = 1 Query: 40 MGNVSATRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQVAPRYPGADAPNFGGGNKDSAXXXXXXXXXXXXXXXXXXXXXXXXXAGTRTGDVIGFESTVRATFGVGAVGTA---GQSVXXXXXXXXXXXXXXXGAQQQQTEECPICFMHYHGVNITSCCAKPLCTECYLQVRPPRSSVVCPFCNCAKFSVDYFGPPSKAERDRREREEQRTIEARIHAEQEELMRQVKERNVRETSAAAAAEAAVDXXXXXXXXXXXXXXXXXXXXXRAEAGREGRGALSGAMAAGGVXXXXXXXXXXXXXXXXXXATLPTFATVAERRLTEEQIRKQHAPSATED-----------MSSLGRAT---LAGGXXXXXXXXXXLDHALAEATA--RRHQNRRAARLATGGRRHSSLEG-GGSDSGSEFHADGIGEGEIQQVEDLMLMEALRLSVLEEQARRERSGDMMRAAT 1380 MGNVS TRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIM+GQVAPRYPGADAP+FG G + S A G VIG+ESTVRATFG GAVGT G XXXXXXXXXXXXXX TEECPICFMHYHGVN T+CCAKPLCTECYLQVRPPRSSVVCPFCNC KFSV+Y GPPSK + D+R EEQRTIEARIHAEQEELMRQV ERN RETSA XXXXXXXXXXXXXXXXXXXX P+FATVAERR+TE+QIRKQH P AT SS+G A AGG L HALA + A R H NRR +R+ G RR S LEG GG+D G+EFHADG+GEGEIQQVEDLML+EALRLSVLEEQARRERSGD+MRAAT Sbjct: 1 MGNVSTTRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMDGQVAPRYPGADAPSFGPGKEASGSGGGGLGS-----------------ASVSAGGVIGYESTVRATFGPGAVGTGRSGGVGAAXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTTCCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPSKEDHDKRMAEEQRTIEARIHAEQEELMRQVTERNARETSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------------------------------------------PSFATVAERRMTEDQIRKQHVPPATXXXXXXXXXSIGRQSSMGAAAGARTAGGRVAPGS----LKHALAVSAAAGRHHHNRRGSRIGPG-RRRSYLEGAGGNDGGNEFHADGVGEGEIQQVEDLMLVEALRLSVLEEQARRERSGDLMRAAT 403
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Match: D8LDS6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS6_ECTSI) HSP 1 Score: 362 bits (928), Expect = 2.000e-108 Identity = 287/457 (62.80%), Postives = 310/457 (67.83%), Query Frame = 1 Query: 40 MGNVSATRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQVAPRYPGADAPNFGGGNKDSAXXXXXXXXXXXXXXXXXXXXXXXXXAGTRTGDVIGFESTVRATFGVGAVGTAGQSVXXXXXXXXXXXXXXXGAQQ-----QQTEECPICFMHYHGVNITSCCAKPLCTECYLQVRPPRSSVVCPFCNCAKFSVDYFGPPSKAERDRREREEQRTIEARIHAEQEELMRQVKERNVRETSAAAAAEAAVDXXXXXXXXXXXXXXXXXXXXXRAEAGREGRGALSGAMAAGGVXXXXXXXXXXXXXXXXXXATLPTFATVAERRLTEEQIRKQHAPSATEDMSSLGRAT-LAGGXXXXXXXXXXLDHALAEATA--RRHQNRRAARLATGGRRHSSLEG-GGSDSGSEFHADGIGEGEIQQVEDLMLMEALRLSVLEEQARRERSGDMMRAATA 1383 MGNVS TRRKSGSKELEKYCKPTGLYETCPW+ERVVRRWIM+GQVAPRYPGADAP+FGG K+++ XXXX A G VIG+E+TVRATFG GAVGT XXXXXXXXXXXXXXX +QTEECPICFMHYHGVN T+CCAKPLCTECYLQVRPPRSSVVCPFCNC KFSV+Y GPPS+ +R++R EEQRTIEARIHAEQEELMRQVKERN RETS XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX +AGG LDHALA + A R H NRR +R+ G RR S LEG GG+D EFHADG+GEGEIQQVEDLML+EALRLSVLEEQARRERSGD+MRAATA Sbjct: 1 MGNVSTTRRKSGSKELEKYCKPTGLYETCPWDERVVRRWIMDGQVAPRYPGADAPSFGGPGKEASGGXXXXLGS----------------ASVSAGGVIGYETTVRATFGPGAVGTGRSGXXXXXXXXXXXXXXXXXXXXXXXXXKQTEECPICFMHYHGVNRTTCCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPSEEDREKRMAEEQRTIEARIHAEQEELMRQVKERNARETSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAGGRVAPGS----LDHALAVSAAAGRHHHNRRGSRIGPG-RRRSYLEGAGGNDGADEFHADGVGEGEIQQVEDLMLVEALRLSVLEEQARRERSGDLMRAATA 436
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Match: A0A835Z3B9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B9_9STRA) HSP 1 Score: 160 bits (406), Expect = 6.390e-42 Identity = 138/443 (31.15%), Postives = 175/443 (39.50%), Query Frame = 1 Query: 40 MGNVSA--TRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQVAPRYPGADAPNFGGGNKDSAXXXXXXXXXXXXXXXXXXXXXXXXXAGTRTGDVIGFESTVRATFGVGAVGTAGQSVXXXXXXXXXXXXXXXGAQQQQTEECPICFMHYHGVNITSCCAKPLCTECYLQVRPPRSSVVCPFCNCAKFSVDYFGPPSKAERDRREREEQRTIEARIHA-------EQEELMRQVKERNVRETSAAAAAEAAVDXXXXXXXXXXXXXXXXXXXXXRAEAGREGRGALSGAMAAGGVXXXXXXXXXXXXXXXXXXATLPTFATVAERRLTEEQIRKQHAPSATEDMSSLGRATLAGGXXXXXXXXXXLDHALAEATARRHQNRRAARLATGGRRHSSLEGGGSDSGSEFHADGIGE--------GEIQQVEDLMLMEALR 1317 MGN+ A + K ++ELE+YCKPTGLY +CPWEE+ VR+WI+EG+VAPR+P D P+ G EECPICFM H N T CC KPLCTECYLQ+RPPR V CPFCN F+V Y GP S E+ RR +EEQR IEA+I A +Q E +++ E R TSAAAAA V RA AG + +L +A ATV RR E ++R+QH T A A A + +RR+ T R + + GG +D G A G E ++QQ+ED MLMEA+R Sbjct: 1 MGNLPAAVSHHKGKNRELERYCKPTGLYPSCPWEEKTVRKWILEGKVAPRFPPLDNPDDG------------------------------------------------------------------------------------AEECPICFMFCHATNTTVCCGKPLCTECYLQLRPPRVCVDCPFCNSGSFAVSYSGPLSADEKHRRLQEEQRVIEAKIRAAREEAEAQQAEYVKRQSESRARTTSAAAAAPVTVSRRSSAPISTTPPHSPGPTARGRAGAGGRSQ-SLDVPLAT-------------------------ALATVDSRRQLESEMRRQHLLHPTVPSP-------------------------AAAAAAQPAHRRSR---TSVDRFAGVSGGDADGGMGAAALGPAELLARIGRASDMQQLEDTMLMEAIR 305
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Match: A0A484DZ79_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZ79_BRELC) HSP 1 Score: 111 bits (277), Expect = 1.060e-23 Identity = 64/197 (32.49%), Postives = 85/197 (43.15%), Query Frame = 1 Query: 49 VSATRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQVAPRYPGADAPNFGGGNKDSAXXXXXXXXXXXXXXXXXXXXXXXXXAGTRTGDVIGFESTVRATFGVGAVGTAGQSVXXXXXXXXXXXXXXXGAQQQQTEECPICFMHYHG-VNITSCCAKPLCTECYLQVRPPRSSVVCPFCNCAKFSVDYFGPP 636 +S+ R G++E+EKY +PTGLY TCPWE + RR I+E ++APR+PG +A GF T ECPICFM Y G +N++SCC+KP+C+ECYLQ+RPP+ + CPFCN F V Y PP Sbjct: 11 ISSRRLTIGTREIEKYTQPTGLYPTCPWEHKAARRLILERKLAPRFPGQEAKE-------------------------------------------GFF----------------------------------------TLECPICFMFYPGNLNVSSCCSKPICSECYLQIRPPQKPICCPFCNQEAFGVQYAQPP 124
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Match: K3X652_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X652_GLOUD) HSP 1 Score: 109 bits (273), Expect = 4.140e-23 Identity = 64/201 (31.84%), Postives = 90/201 (44.78%), Query Frame = 1 Query: 40 MGNVSAT--RRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQVAPRYPGADAPNFGGGNKDSAXXXXXXXXXXXXXXXXXXXXXXXXXAGTRTGDVIGFESTVRATFGVGAVGTAGQSVXXXXXXXXXXXXXXXGAQQQQTEECPICFMHYHG-VNITSCCAKPLCTECYLQVRPPRSSVVCPFCNCAKFSVDYFGP 633 MGN S+T RR S ++ELEKY KPTGLY TCPWE++ RR I++ ++APR+PG +A K+S T+ECPICFM+Y G +N+++CC K +C+EC+LQ++PP+ + CPFCN F + Y P Sbjct: 1 MGNNSSTSSRRSSVTRELEKYTKPTGLYPTCPWEQKAARRMIIDRKIAPRFPGREA-------KESCF----------------------------------------------------------------------------TQECPICFMYYPGNLNVSTCCKKLICSECFLQMKPPKKMICCPFCNRDTFGIKYTAP 118
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Match: A0A8K1C573_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C573_PYTOL) HSP 1 Score: 108 bits (270), Expect = 1.260e-22 Identity = 66/199 (33.17%), Postives = 88/199 (44.22%), Query Frame = 1 Query: 40 MGNVSATRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQVAPRYPGADAPNFGGGNKDSAXXXXXXXXXXXXXXXXXXXXXXXXXAGTRTGDVIGFESTVRATFGVGAVGTAGQSVXXXXXXXXXXXXXXXGAQQQQTEECPICFMHYHG-VNITSCCAKPLCTECYLQVRPPRSSVVCPFCNCAKFSVDYFGP 633 MGN S +R S S+EL+++ PTGLY +CPW+ R VRR I+E ++APR+PG D+ K+S T+ECPICFM+Y G +N +CC KP+C+ECYLQ++PPR SV CPFCN FS+ Y P Sbjct: 1 MGN-SPPKRASISRELDRFTHPTGLYPSCPWDFRSVRRMILEKKIAPRFPGRDS-------KESCF----------------------------------------------------------------------------TQECPICFMYYPGSLNTATCCKKPICSECYLQLKPPRKSVCCPFCNREGFSIKYTAP 115
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Match: A0A7R9UGC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGC3_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.520e-21 Identity = 59/189 (31.22%), Postives = 74/189 (39.15%), Query Frame = 1 Query: 82 ELEKYCKPTGLYETCPWEERVVRRWIMEGQVAPRYPGADAPNFGGGNKDSAXXXXXXXXXXXXXXXXXXXXXXXXXAGTRTGDVIGFESTVRATFGVGAVGTAGQSVXXXXXXXXXXXXXXXGAQQQQTEECPICFMHYHGVNITSCCAKPLCTECYLQVRPPRSSVVCPFCNCAKFSVDYFGPPSKAE 648 +LE +C+PTGLY +C W+ RVVRR I+ G++APR G DAP +ECPICF +Y VN T+CC +P+CTECYLQV+PPR CPFCN FS Y P +AE Sbjct: 23 QLEAFCRPTGLYPSCSWDVRVVRRAILNGKLAPRMKGTDAP-----------------------------------------------------------------------------------ASLSDDECPICFFYYGKVNTTTCCKQPICTECYLQVKPPREDKACPFCNRECFSATYL-PKERAE 127
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Match: A0A225WD83_9STRA (RING-type domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WD83_9STRA) HSP 1 Score: 103 bits (256), Expect = 9.620e-21 Identity = 63/194 (32.47%), Postives = 81/194 (41.75%), Query Frame = 1 Query: 46 NVSATRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQVAPRYPGADAPNFGGGNKDSAXXXXXXXXXXXXXXXXXXXXXXXXXAGTRTGDVIGFESTVRATFGVGAVGTAGQSVXXXXXXXXXXXXXXXGAQQQQTEECPICFMHYHG-VNITSCCAKPLCTECYLQVRPPRSSVVCPFCNCAKFSVDY 624 N + R +G++ELEKY PTGLY +CPWE + RR I+E ++APR+ G +A TF T ECPICFM Y G +N++SCC KP+C+ECYLQ+RPP + CPFCN FSVDY Sbjct: 9 NGISRRHSTGTRELEKYTHPTGLYPSCPWEFKTARRLIIERKLAPRFHGKEAKE--------------------------------------------------GTF---------------------------------TLECPICFMFYPGSLNLSSCCNKPICSECYLQIRPPEKPIPCPFCNHEAFSVDY 119
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Match: A0A7S1TCU7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCU7_9RHOD) HSP 1 Score: 100 bits (248), Expect = 9.920e-21 Identity = 62/201 (30.85%), Postives = 79/201 (39.30%), Query Frame = 1 Query: 94 YCKPTGLYETCPWEERVVRRWIMEGQVAPRYPGADAPNFGGGNKDSAXXXXXXXXXXXXXXXXXXXXXXXXXAGTRTGDVIGFESTVRATFGVGAVGTAGQSVXXXXXXXXXXXXXXXGAQQQQTEECPICFMHYHGVNITSCCAKPLCTECYLQVRPPR--SSVVCPFCNCAKFSVDYFGPPSKAERDRREREEQRTIEA 690 + K TGLY CPW ER+VRR I+ G+VAPRYPGAD P + Q +EC ICF++Y +N T CC K +CTEC+LQ+RPP+ S CPFC F + + GP S +R E EEQR + A Sbjct: 22 FSKATGLYPYCPWSERLVRRLILRGRVAPRYPGADEPT-----------------------------------------------------------------------------------EVQRDECLICFLYYPMLNSTVCCGKQICTECFLQIRPPKLHHSEDCPFCKTPSFDISFKGPKSSEQRRMEELEEQRVMRA 139
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Match: A0A0P1A6S3_PLAHL (Ring u-box domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6S3_PLAHL) HSP 1 Score: 101 bits (252), Expect = 1.260e-20 Identity = 63/197 (31.98%), Postives = 83/197 (42.13%), Query Frame = 1 Query: 61 RRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQVAPRYPGADAPNFGGGNKDSAXXXXXXXXXXXXXXXXXXXXXXXXXAGTRTGDVIGFESTVRATFGVGAVGTAGQSVXXXXXXXXXXXXXXXGAQQQQTEECPICFMHYHG-VNITSCCAKPLCTECYLQVRPPRSSVVCPFCNCAKFSVDYFGPPSKAE 648 R +G ++L+K+ +PTGLY TCPWE + VRR I++ ++APR+PG + KD T ECPICFM Y G +N +SCC+KP+C+ECYLQ+RPP + CPFCN FSV Y PS AE Sbjct: 14 RHSTGMRDLDKFTQPTGLYSTCPWEHKTVRRLIVDKKLAPRFPGQET-------KDGCF----------------------------------------------------------------------------TLECPICFMFYPGSLNASSCCSKPICSECYLQIRPPDKHICCPFCNQEAFSVRY-ALPSAAE 126 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5744.14143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5744.14143.1 >prot_L-elsbetiae_contig5744.14143.1 ID=prot_L-elsbetiae_contig5744.14143.1|Name=mRNA_L-elsbetiae_contig5744.14143.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=483bp QLFRSARDGRRETMGNVSATRRKSGSKELEKYCKPTGLYETCPWEERVVRback to top mRNA from alignment at L-elsbetiae_contig5744:1734..11433+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5744.14143.1 ID=mRNA_L-elsbetiae_contig5744.14143.1|Name=mRNA_L-elsbetiae_contig5744.14143.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9700bp|location=Sequence derived from alignment at L-elsbetiae_contig5744:1734..11433+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5744:1734..11433+ >mRNA_L-elsbetiae_contig5744.14143.1 ID=mRNA_L-elsbetiae_contig5744.14143.1|Name=mRNA_L-elsbetiae_contig5744.14143.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2898bp|location=Sequence derived from alignment at L-elsbetiae_contig5744:1734..11433+ (Laminarionema elsbetiae ELsaHSoW15)back to top |