mRNA_L-elsbetiae_contig5735.14128.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5735.14128.1
Unique NamemRNA_L-elsbetiae_contig5735.14128.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Match: D8LN12_ECTSI (Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN12_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 3.340e-114
Identity = 184/195 (94.36%), Postives = 186/195 (95.38%), Query Frame = 1 
Query:    1 GMPSAERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVFVRVAFVLAGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 585
            GM +AERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLS +APADQ ALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAV CLILSLF   NVFVRVA VL GFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH
Sbjct:   15 GMQTAERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209
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BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Match: A0A7S1UDR8_9STRA (Protein YIPF n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDR8_9STRA)

HSP 1 Score: 266 bits (681), Expect = 4.320e-83
Identity = 137/190 (72.11%), Postives = 161/190 (84.74%), Query Frame = 1 
Query:   13 AERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVFVRVAFVLAGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 582
            A+    +M  TLDEPVSETIMRDLR V  KLK+VL PR DQ+GV+ KLKDWDLWGPL+VCLTLS++LS TAP  QKALVFA+VF V+WCGAA+VTLNAQLLGGTISFFQSVCVLGYCVFPL ++A+ C+ LSL GL ++ VR   V+ GFVWATRAS VFI++II  ERK+LAVYPVFFFYTF+SWMI++
Sbjct:    2 ADNMVTAMPTTLDEPVSETIMRDLRQVADKLKVVLLPREDQEGVVQKLKDWDLWGPLLVCLTLSLLLSVTAPESQKALVFASVFFVIWCGAAVVTLNAQLLGGTISFFQSVCVLGYCVFPLTIAAIVCVFLSLIGLGHIAVRCIVVVLGFVWATRASVVFIAKIIKAERKILAVYPVFFFYTFLSWMILL 191
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BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Match: A0A836CPM4_9STRA (Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPM4_9STRA)

HSP 1 Score: 256 bits (654), Expect = 6.440e-79
Identity = 133/182 (73.08%), Postives = 158/182 (86.81%), Query Frame = 1 
Query:   40 NTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVF-VRVAFVLAGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 582
            NTLDEPVSETIMRDLR VG+KLKIVL P+GDQ+GVL KLK+WDLWGPL+VCL LSI+LS TAPA+Q ALVFA+VFVVVWCGAA+VT+NAQLLGG ISFFQSVCVLGYCVFPL++++  CLI     LT +F +R   V+ GF+W+TRAS VFI +IIS ERK+LAVYPVFFFY F+SWM+++
Sbjct:   22 NTLDEPVSETIMRDLRQVGSKLKIVLMPKGDQEGVLKKLKEWDLWGPLLVCLVLSIMLSSTAPANQGALVFASVFVVVWCGAAMVTVNAQLLGGGISFFQSVCVLGYCVFPLVLASAACLIAK--ALTGLFFIRALLVVVGFMWSTRASVVFIKQIISPERKVLAVYPVFFFYAFLSWMVLL 201
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BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Match: A0A7S2V1N2_9STRA (Protein YIPF n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1N2_9STRA)

HSP 1 Score: 256 bits (653), Expect = 8.200e-79
Identity = 136/180 (75.56%), Postives = 153/180 (85.00%), Query Frame = 1 
Query:   43 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVFVRVAFVLAGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 582
            TLDEPVSETIMRDL+ V  KLK+VL PR +Q GVL KLK+WDLWGPLMVCLTLS++L  TAPADQ ALVFAAVFVVVW GAA+VTLNAQLLGGTISFFQSVCVLGYCVFPL V A+  L++ L    N+FV++  V  GF WATRAS VFI++IIS +RK+LAVYPVFFFYTFISWMIVI
Sbjct:   19 TLDEPVSETIMRDLKQVYGKLKVVLLPRENQQGVLHKLKEWDLWGPLMVCLTLSMLLCATAPADQTALVFAAVFVVVWVGAAIVTLNAQLLGGTISFFQSVCVLGYCVFPLTVVALVLLLVRLLIFNNIFVKLVLVAIGFAWATRASVVFIAQIISPQRKILAVYPVFFFYTFISWMIVI 198
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BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Match: I2CPI6_NANGC (Protein YIPF n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPI6_NANGC)

HSP 1 Score: 231 bits (588), Expect = 4.840e-69
Identity = 118/180 (65.56%), Postives = 150/180 (83.33%), Query Frame = 1 
Query:   43 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVFVRVAFVLAGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 582
            TLDEPV +T+ RDL  VG+KL++VL PR +QDGVL KLKDWDLWGPL+VCLTLSI+LS TAP +Q ALVFAAVF VVW GAA+VT+NAQLLGGTISFFQS+C+LGYCVFPL ++A+  L++ L    ++ V+   V  GF WATRAS VFI ++I+ ERK+LA++PVFFFYTF++W+++I
Sbjct:   28 TLDEPVWQTVKRDLTQVGSKLQVVLLPRENQDGVLKKLKDWDLWGPLLVCLTLSILLSITAPEEQGALVFAAVFFVVWFGAAVVTMNAQLLGGTISFFQSLCILGYCVFPLDIAALANLLIGL-AFQSLVVKAVVVAVGFAWATRASVVFIGQVIAPERKVLALFPVFFFYTFLAWLVLI 206
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BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Match: A0A1V9Z1I2_9STRA (Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1I2_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.270e-68
Identity = 115/183 (62.84%), Postives = 148/183 (80.87%), Query Frame = 1 
Query:   34 MMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVFVRVAFVLAGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 582
            ++NTLDEPVSETIMRD+R VG+KLK+VL P+   D  L  L+DWDLWGPLMVCLTLSI+LS TAP +Q A+VF +VFVVVW GAA+VT+NAQLLG TISFFQS+CVLGYCVFPL+++ + C +  +   ++V +R+ FV  GF+W+TRAS VF+S+++  ++K L VYPV  FY FISWMI+I
Sbjct:   13 VVNTLDEPVSETIMRDVRLVGSKLKVVLAPKNTSDETLQALRDWDLWGPLMVCLTLSIMLSMTAPTNQSAMVFTSVFVVVWVGAAVVTINAQLLGSTISFFQSICVLGYCVFPLVIATIACFLTRVVS-SHVAIRLVFVGIGFIWSTRASVVFMSQLVPPKKKALTVYPVLLFYIFISWMILI 194
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BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Match: A0A7S3NP36_9STRA (Protein YIPF n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NP36_9STRA)

HSP 1 Score: 226 bits (575), Expect = 2.400e-67
Identity = 120/180 (66.67%), Postives = 144/180 (80.00%), Query Frame = 1 
Query:   43 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVFVRVAFVLAGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 582
            TLDEPVSETIMRDLR VGAKLK+V+ PR  Q GVL +LK+WDLWGPL VCLTLS+ L F A   Q+ L+FAAVFV+VW GAA+VTLNAQLLGGTISFFQSVCVLGY +FPL ++++ CL+LS    T++ +R A V   F WATR S VF S++IS +R+ LAVYPVF FY FI+WMI+I
Sbjct:   12 TLDEPVSETIMRDLREVGAKLKLVVLPRESQAGVLDRLKEWDLWGPLAVCLTLSMSLCFAAAEKQRGLIFAAVFVIVWVGAAVVTLNAQLLGGTISFFQSVCVLGYSIFPLNIASLGCLLLSQIPRTSI-LRFALVAVSFAWATRVSVVFFSQVISHDRRALAVYPVFGFYAFIAWMILI 190
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BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Match: A0A067CCZ0_SAPPC (Protein YIPF n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CCZ0_SAPPC)

HSP 1 Score: 224 bits (572), Expect = 7.600e-67
Identity = 115/181 (63.54%), Postives = 145/181 (80.11%), Query Frame = 1 
Query:   40 NTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVFVRVAFVLAGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 582
            NTLDEPVSETI+RD+R VG+KLK+VL PR   D  L  L+DWDLWGPLMVCL LSI+LS TAPA+Q A+VF +VFVVVW GAA+VT+NAQLLG TISFFQS+CVLGYCVFPL+++ + C +  +   ++V +R+  V  GFVW+TRAS VF+S+++  ++K L VYPV  FY FISWMI+I
Sbjct:   15 NTLDEPVSETILRDVRLVGSKLKVVLMPRNTSDETLQALRDWDLWGPLMVCLMLSILLSLTAPANQSAMVFTSVFVVVWVGAAVVTVNAQLLGSTISFFQSICVLGYCVFPLVIATLACFLTRVVS-SHVTIRLILVGVGFVWSTRASVVFMSQLVPPKKKALTVYPVLLFYIFISWMILI 194
[Close]
BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Match: A0A485KII9_9STRA (Protein YIPF n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KII9_9STRA)

HSP 1 Score: 222 bits (565), Expect = 9.700e-66
Identity = 112/185 (60.54%), Postives = 142/185 (76.76%), Query Frame = 1 
Query:   28 QSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVFVRVAFVLAGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 582
            Q    TLDEPVSETI+RD+R VG+KLK+VL P+   D  L  L+DWDLWGPL+VCL LSI+LS TAP +Q A+VF  VFVVVW GAA+VT+NAQLLG TISFFQS+CVLGYCVFPL+++ +   +  L  L +V VR+  V  GF+W+TRAS VF+S+++  +R+ L VYPV  FY FI+WMI+I
Sbjct:   15 QKKETTLDEPVSETILRDVRLVGSKLKVVLMPKNTSDQTLQALRDWDLWGPLLVCLVLSIMLSITAPTNQSAMVFTGVFVVVWAGAAVVTVNAQLLGSTISFFQSICVLGYCVFPLVIATLVNTVFRLASLGHVAVRIVIVAVGFIWSTRASVVFMSQLVPPKRQALTVYPVLLFYLFIAWMILI 199
[Close]
BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Match: A0A8J2SB60_9STRA (Protein YIPF n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SB60_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.210e-65
Identity = 124/181 (68.51%), Postives = 140/181 (77.35%), Query Frame = 1 
Query:   43 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVFV-RVAFVLAGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 582
            TLDEPVSETI RDLR VGAKLK+VL PR  Q GVL +LK+WDLWGPL VCLTLSI LS  AP  Q+ALVFAAVFVVVW GAA+VTLNAQLLGG ISFFQSVCVLGY +FPL   A  CL+L    LT  F+ R+A V   F W+TR S VF SEII  +R+ LA+YPVF FY F++WMI+I
Sbjct:   13 TLDEPVSETIRRDLREVGAKLKLVLLPRASQHGVLDRLKEWDLWGPLAVCLTLSIALSAGAPESQRALVFAAVFVVVWAGAAIVTLNAQLLGGRISFFQSVCVLGYSIFPLDCGAFACLLLH--ALTRSFLLRLAVVGTCFAWSTRVSVVFFSEIIEAKRRALAIYPVFGFYAFLAWMILI 191
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5735.14128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN12_ECTSI3.340e-11494.36Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S1UDR8_9STRA4.320e-8372.11Protein YIPF n=1 Tax=Phaeomonas parva TaxID=124430... [more]
A0A836CPM4_9STRA6.440e-7973.08Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2V1N2_9STRA8.200e-7975.56Protein YIPF n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
I2CPI6_NANGC4.840e-6965.56Protein YIPF n=1 Tax=Nannochloropsis gaditana (str... [more]
A0A1V9Z1I2_9STRA1.270e-6862.84Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=7... [more]
A0A7S3NP36_9STRA2.400e-6766.67Protein YIPF n=1 Tax=Aureoumbra lagunensis TaxID=4... [more]
A0A067CCZ0_SAPPC7.600e-6763.54Protein YIPF n=3 Tax=Saprolegniaceae TaxID=4764 Re... [more]
A0A485KII9_9STRA9.700e-6660.54Protein YIPF n=2 Tax=Aphanomyces TaxID=100860 RepI... [more]
A0A8J2SB60_9STRA2.210e-6568.51Protein YIPF n=1 Tax=Pelagomonas calceolata TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5735contigL-elsbetiae_contig5735:5459..9753 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.5
Seed ortholog evalue1.6e-92
Seed eggNOG ortholog2880.D8LN12
Preferred nameYIPF6
Hectar predicted targeting categoryother localisation
GOsGO:0000138,GO:0002064,GO:0002065,GO:0002066,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005795,GO:0005797,GO:0005798,GO:0005801,GO:0005802,GO:0007275,GO:0008150,GO:0009888,GO:0009987,GO:0012505,GO:0030134,GO:0030135,GO:0030154,GO:0030855,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0032501,GO:0032502,GO:0035295,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0048468,GO:0048565,GO:0048731,GO:0048856,GO:0048869,GO:0055123,GO:0060429,GO:0060575,GO:0060576,GO:0097708,GO:0098791
EggNOG free text desc.intestinal epithelial cell development
EggNOG OGsCOG5080@1,KOG2946@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionterbinafine resistance locus protein (yip1)
Ec32 orthologEc-27_000980.1
Exons5
Model size1719
Cds size585
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816613.0351892-UTR-L-elsbetiae_contig5735:5458..65891622816613.0351892-UTR-L-elsbetiae_contig5735:5458..6589Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5735 5459..6589 -
1691683684.9636047-UTR-L-elsbetiae_contig5735:5458..65891691683684.9636047-UTR-L-elsbetiae_contig5735:5458..6589Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5735 5459..6589 -
1622816613.120352-UTR-L-elsbetiae_contig5735:9750..97531622816613.120352-UTR-L-elsbetiae_contig5735:9750..9753Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5735 9751..9753 -
1691683685.0216753-UTR-L-elsbetiae_contig5735:9750..97531691683685.0216753-UTR-L-elsbetiae_contig5735:9750..9753Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5735 9751..9753 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816613.050415-CDS-L-elsbetiae_contig5735:6589..66991622816613.050415-CDS-L-elsbetiae_contig5735:6589..6699Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5735 6590..6699 -
1691683684.974884-CDS-L-elsbetiae_contig5735:6589..66991691683684.974884-CDS-L-elsbetiae_contig5735:6589..6699Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5735 6590..6699 -
1622816613.0654643-CDS-L-elsbetiae_contig5735:8158..83101622816613.0654643-CDS-L-elsbetiae_contig5735:8158..8310Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5735 8159..8310 -
1691683684.9831803-CDS-L-elsbetiae_contig5735:8158..83101691683684.9831803-CDS-L-elsbetiae_contig5735:8158..8310Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5735 8159..8310 -
1622816613.0786026-CDS-L-elsbetiae_contig5735:8723..88861622816613.0786026-CDS-L-elsbetiae_contig5735:8723..8886Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5735 8724..8886 -
1691683684.991666-CDS-L-elsbetiae_contig5735:8723..88861691683684.991666-CDS-L-elsbetiae_contig5735:8723..8886Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5735 8724..8886 -
1622816613.0931008-CDS-L-elsbetiae_contig5735:9131..92221622816613.0931008-CDS-L-elsbetiae_contig5735:9131..9222Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5735 9132..9222 -
1691683685.000614-CDS-L-elsbetiae_contig5735:9131..92221691683685.000614-CDS-L-elsbetiae_contig5735:9131..9222Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5735 9132..9222 -
1622816613.1054175-CDS-L-elsbetiae_contig5735:9681..97501622816613.1054175-CDS-L-elsbetiae_contig5735:9681..9750Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5735 9682..9750 -
1691683685.0101407-CDS-L-elsbetiae_contig5735:9681..97501691683685.0101407-CDS-L-elsbetiae_contig5735:9681..9750Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5735 9682..9750 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5735.14128.1prot_L-elsbetiae_contig5735.14128.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5735 6590..9750 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5735.14128.1

>prot_L-elsbetiae_contig5735.14128.1 ID=prot_L-elsbetiae_contig5735.14128.1|Name=mRNA_L-elsbetiae_contig5735.14128.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp
MPSAERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTK
LKDWDLWGPLMVCLTLSIVLSFTAPADQKALVFAAVFVVVWCGAALVTLN
AQLLGGTISFFQSVCVLGYCVFPLLVSAVFCLILSLFGLTNVFVRVAFVL
AGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH*
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mRNA from alignment at L-elsbetiae_contig5735:5459..9753-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5735.14128.1 ID=mRNA_L-elsbetiae_contig5735.14128.1|Name=mRNA_L-elsbetiae_contig5735.14128.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4295bp|location=Sequence derived from alignment at L-elsbetiae_contig5735:5459..9753- (Laminarionema elsbetiae ELsaHSoW15)
GGCATGCCGTCGGCCGAGCGAACACCGCAGAGCATGATGAACACGCTGGA
TGAGCCGGTCTCGGAAACCATTGTGAGTCGTTTCCTCGGGGGGGGGAGAG
CGCGGGGAACGCGCACTTGTTTGCAAGCAGGATGTGTACATACGTGACTG
CGTGGTCGTGTCTACCCATCACGTTGCTGGTGGTGCCAGGTCTCCTCTGT
ATCCGACGGCTTTCGACAGATCTATCTGTACGTCGACCGCTATCGTCATT
TGTTTGATACATACGACGCGAGGGCTGCTGGATTCGACCCTGATTTGTAC
AATCCAGTGTTCTGGGGGGGTGTCTGGCCAGAGCGGGTGTATGCATTGGG
CATGGCGGAACGGCTTCGGTTGGGAAGACCATACCGTAGGAGCGGCATCA
CCGGCGGCAACAAACAGCGGAGACAAAACAAACACGATCTATGTAGCGTC
GACCACGAGCAACCCTTAGCAGCTCTCGCGCTAAGATACTGCTGTTTGCC
ACCGCACTATATATATACCCGTTTACGTCAGATGCGAGACTTGCGGTCCG
TTGGAGCAAAGTTGAAGATCGTGCTCAACCCGAGGGGTGACCAAGACGGG
GTGCTTACGAAGCTCAAGGACTGTGAGTGTGCCGCCTCCGCAGCAGATGG
CCGCCTTCTTTCCTCTCTCTCACTCCCGTTGCCCCAAAACCCTTTTTTTG
GTTGCGAACTATGTCGGTTTTCATGGCATCCCGAGGGCACAATATACTAC
TCTTTGGCAGGCAGAGCCCCAGGCGAGGTTATTTCCTGGTTGAATGAATT
CTCGAGCACGTTTTCATGCCCGCTCCTCCCTCCCCCATTCTCGCGTTTTT
TTTTTTTTTTCTGCCAGGGGACTTGTGGGGACCGCTGATGGTGTGCCTGA
CGCTGTCGATCGTTCTCAGCTTCACGGCCCCGGCGGACCAGAAGGCTTTG
GTTTTCGCGGCGGTGTTCGTGGTGGTGTGGTGCGGGGCGGCCCTGGTCAC
GCTCAACGCGCAGCTCTTGGGCGGAACGATGTGAGGATCGGAGCATTTTC
GAATCCGCGAAAGAAGAAAGTCAAAAGTCGCACGAAAATGACACTGAAGA
ATGGTTGCGCAGAGAGTCTTTGGCGTAGGCATGCAGCTGCACATTCGCAG
CTGCTACTGACCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGGAGGAAGGG
GGCCGGTGGAGCAGACGACGAATACACCAATAATGGGAGGAGAAAACAAT
ACTATTGTTGAAATGCGTGGCTAAATAGGAAACAATAGCCAGCTCAGCGA
GGCAGCTAGTGAACGACTTGCGCGCCCTTTGTACACATTGAGTTTTTCTT
TCGAGCTGCTGTCGACCTTGTACGACCGGTACAGTAGGTTTACCGAGCAC
GACTAAAAGGCTCTTCCTCTACCCCCCTGCCTCCTGTGCGCAGTTCTTTC
TTCCAGAGTGTGTGCGTCCTGGGCTACTGCGTGTTCCCGCTGCTGGTGTC
GGCGGTGTTCTGTCTGATATTGAGCCTGTTCGGCTTGACGAACGTGTTCG
TTCGCGTGGCCTTCGTGCTGGCGGGCTTCGTCTGGGCAACACGAGGTCAG
CATTCACCACAGCCGCGCTTGATTGCGTTGTTACCACGAACAACGCATGT
GTATGATGTTCGTTGCAGGCCTTTTTTTTTTGTGCGCACGCGCCTGCGCC
GCTGTGCGCATGAAGTCAATCGTGCTGGTGGTGATCGTGTACATATTGTG
ATCGGTTGACTAGTAGCGCGTCAACGGTGTCTTCGAGTGCATCGTCACCT
CAAGTCGGGGCAGTTTCTCATGCTGTCTGCAAAGCGTGCATGACCCTCAT
TTTCTCTTTTTGTGTGCATGACTCCTTGGAAAATATTGTTTCCCGCTAGT
CTGCGTATGTGTACGTAGTACCGGGGATATTACCTCCCCCCCTAGACCCT
TATCTCGTCGAGCCAAAGAGATTTGTCATCGATACATCACGCGTAGACCA
GTACCTCAGGAAGTTTGTCCACGCACGTTTTCTGGTTCTTACGTAGGAAA
CCCCGCGCTCGAAAAACAATCGTGGGCGTCCCTTGGCGCTTCTCTGCTGC
TTTGGGTTCTAAGAGCCGCTCCTTCGTCCAGGCATATTTTTGTTCTGCTG
ACCTATCTTCCCAGACATAATCATCATGCATTTATTGTTTTGTTTCTTTC
GAATTGCCTTTATTTAGGAGTATTATTTTCCGAGACTCCCGAGGGAAGAG
GGAAATACCGACCTGGCAGAGCTACGTTCCCGTAGATGTATTTCTGCGCC
AACTGGACCGTGCACTCTGCCTCTTCGCTCAAACACTACCTCTTCCCTTA
GTGAGAACAACCGAGGATTCTCCATCCTCTGGCGAAGGGAACTAATCTTA
CTGCAAGCAGTAGGCTCGGATTACCAAGTCCCCAAATGGCATCCTACCAT
TTCCTACGCCAAGCTAGAACAGTAGCTCCTACTTACTAAAACAGGATCCT
CTCCTTCCCCCACCTTCGAAAGAAAAGGGGTGGATGGGCGGAAAAATACC
CGACTTATTGGCGGCTTCTGCTCAGCAACTCCTGGAAGCCTTGCTACGTG
CCCACCTTACTCCATTCCTCTGCACTACGCTCTCTAGAGCGCTAAAACTC
TCTAGGTGAACGGGTGGCTTCCATGGAGTGATGGTCACAAACACGCTGCC
AAGCTGGGGGGTTCGCACTCTTCTCCGAGTACCCTGAAAAACCGGTAGAG
AAACGCCTCTGGAACTGGTTCTAAAAGGAATCCGAAACGGTCATTTCCAT
AAACATTGGCTTGTTCCGCCGCTGGGCAGCTTGAACAAGCCTACACTTTC
TGACCCTTCCGCTGAGGACTTACGTCGTGGTGTCGCGCCTTTTCATGTAT
TTGGTCCTTGTTTTCGCCTTGTTTGTACGATGGATCCTCGACGCCCACTT
TCAATTGCCGACATAACTATTGTGCGCTGTTTGCCTTACCACCCTGCCCA
CCGGCGCCCCGTGATGGTTTGCATTCCTTGTTCCTCGGGTTCCGTGATTC
ACAGCGTCGAAGGTGTTCATCTCAGAAATCATTTCGGACGAGCGCAAGAT
GCTGGCGGTCTACCCGGTCTTCTTCTTCTACACATTCATCAGCTGGATGA
TTGTCATACACTGATTGCCATACACTGATCGCGGAGCAGCTTGGCGTGTT
GCTCTGTCTTATGAGTTGGCTCAGCGGTTGCATGCAGGGTGCTTATGTAA
GCGTTCGTTTCTGGACGACCGCCGTCACAGACCTTGGCCTTCTGTTTTGG
TTATATCGTGTGAGCGGGTATTCGGTGCGGTGGTTGGTTGGGGTTTTGGA
AACGGGAGGTGCTGCGTGCGTAGCACTCTCACCTGCACCCTCTCGGTTGC
ATCTGGAGAGTTGGTTTATGGACTACTCTGTCAACGGGGCTACAGTGCCT
ATGGGAGTGACAACGCCACCGGTGGGTTTTGAGACGGCTTTGTTAGGAGT
GTTGAGTTGAGCCCAGTCAAGATTCTACCAAGGCGTGCGCGTCGCTGCTC
TGCGTTTCGTAGCCATTGCTCTGCTGCCATCGGCGCCCCAAACACTATTA
TGGTCAGGCAGCTGACGACGGTTTTGGTTGAGAATGCGGCTTAATCTTGT
TCGTTGCCACATTGTATTTGTAGTTCGGTGTGTCGGAGCTTTCGAACACC
CAGATGAGGGGAGGGGGGCAAGAGGTCGCACGCAAACACCTCGGCACGGT
GTTCGAGAATGAGGAAGACGGGTGACAGCATTCATGACAAGATAGCAGCA
ACGTTGTATTTTCGTCTCGGTGCTCTGTGTTTGATCCTTTTGGCCGTTTT
CTTTGGGAACTATGGTGGCTGGTGGTTGTTTATTTATATATATTTTTTTA
TGTCTGGCTATGTGTAAGAATGATGTGCTCGTTGTGTGAAGAAATCTACC
TAATTAACTATCTAATTGACGGAAAGACGTACAGAGCGGGTCGTTTGCAA
AGGAGGGCCATCGCCATTGGCCCCAACTTTGAGCATGTCTTGAACAACGG
TATCGCGGATGAAGCTGACCAGCGATCCAGAGTCCAGCAAGGCAACACAG
GAAAGTTGGGCAATGGCGGGCCCACGATGTAGTTGAACGCGGGTGGTGTA
GGAGTCGTTGTCCATCAAAAGCGTGCCGTCTACCGTAAACGACACAAAAT
AACAACCCCCCTGGACCGATTTTCAAGGCTCGGTTACTCCGCAAAGAGTA
TGGTTCTAATACCAAGCGACACGTTTTCGGACAGCTCTTGACGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5735:5459..9753-

>mRNA_L-elsbetiae_contig5735.14128.1 ID=mRNA_L-elsbetiae_contig5735.14128.1|Name=mRNA_L-elsbetiae_contig5735.14128.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1170bp|location=Sequence derived from alignment at L-elsbetiae_contig5735:5459..9753- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGTCGGCCGAGCGAACACCGCAGAGCATGATGAACACGCTGGATGA
GCCGGTCTCGGAAACCATTATGCCGTCGGCCGAGCGAACACCGCAGAGCA
TGATGAACACGCTGGATGAGCCGGTCTCGGAAACCATTATGCGAGACTTG
CGGTCCGTTGGAGCAAAGTTGAAGATCGTGCTCAACCCGAGGGGTGACCA
AGACGGGGTGCTTACGAAGCTCAAGGACTATGCGAGACTTGCGGTCCGTT
GGAGCAAAGTTGAAGATCGTGCTCAACCCGAGGGGTGACCAAGACGGGGT
GCTTACGAAGCTCAAGGACTGGGACTTGTGGGGACCGCTGATGGTGTGCC
TGACGCTGTCGATCGTTCTCAGCTTCACGGCCCCGGCGGACCAGAAGGCT
TTGGTTTTCGCGGCGGTGTTCGTGGTGGTGTGGTGCGGGGCGGCCCTGGT
CACGCTCAACGCGCAGCTCTTGGGCGGAACGATGGGACTTGTGGGGACCG
CTGATGGTGTGCCTGACGCTGTCGATCGTTCTCAGCTTCACGGCCCCGGC
GGACCAGAAGGCTTTGGTTTTCGCGGCGGTGTTCGTGGTGGTGTGGTGCG
GGGCGGCCCTGGTCACGCTCAACGCGCAGCTCTTGGGCGGAACGATTTCT
TTCTTCCAGAGTGTGTGCGTCCTGGGCTACTGCGTGTTCCCGCTGCTGGT
GTCGGCGGTGTTCTGTCTGATATTGAGCCTGTTCGGCTTGACGAACGTGT
TCGTTCGCGTGGCCTTCGTGCTGGCGGGCTTCGTCTGGGCAACACGAGTT
CTTTCTTCCAGAGTGTGTGCGTCCTGGGCTACTGCGTGTTCCCGCTGCTG
GTGTCGGCGGTGTTCTGTCTGATATTGAGCCTGTTCGGCTTGACGAACGT
GTTCGTTCGCGTGGCCTTCGTGCTGGCGGGCTTCGTCTGGGCAACACGAG
CGTCGAAGGTGTTCATCTCAGAAATCATTTCGGACGAGCGCAAGATGCTG
GCGGTCTACCCGGTCTTCTTCTTCTACACATTCATCAGCTGGATGATTGT
CATACACTGACGTCGAAGGTGTTCATCTCAGAAATCATTTCGGACGAGCG
CAAGATGCTGGCGGTCTACCCGGTCTTCTTCTTCTACACATTCATCAGCT
GGATGATTGTCATACACTGA
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