mRNA_L-elsbetiae_contig5697.14072.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI) HSP 1 Score: 369 bits (947), Expect = 1.140e-102 Identity = 420/1166 (36.02%), Postives = 523/1166 (44.85%), Query Frame = 1 Query: 340 DVCPSAGGIPGIESSNGQACCLASCGQCGGFGCSKVGK---DTDCCISDIVEEGEACSVKGSAPCYIDDVCRAG---VVPSAVHDQPCVVAGEPTWPLLSRNFAAAMTAATLTAPTMAVVTALTRRXXXXXXXXXXXXXXPTPARVAMVRVCPSAGGIPGIESSDGRACCEAECGQCGGDGCSKVGPA---SDCCVTDIVDYGEACSETKAAPCYIGKRGACMVVGRYAMTAATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARAAMVSVF---------------------------------------------------------------------DNFAGGIPGIESSNGQACCLASCGQCGGIGCSKAGK---DTDCCISDIVDAGEACSVKGSAPCYIDDDGTYGRESGACPPLRAVTVPTTVPTVEAAMAARVPTPTPLGAAXXXXXXXXXXXXXXXXETAVVMMAXAMTPATVSLEVLELFYVFGTA---GIPPLSLIAFACSTNPAACSTC--QPCSRFS--YSHLSCCPS----------ISYSPP----GVCASAGGIPGIESSNGQACCLASCGQCGGDGCSKAGK---DTDCCISDIVLDGEACSVKGSAPCYIDDGVAGGIPGIESSNGQACCLASCGQCGGDGCSKAGKDT---DCCISDIVHDGEACSVKGSAPCYIDDGDVPAPPTPIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDLVCAGANDITGIQSSNGRACCVAECGMCGGEGCSTIGASIGLDAHDCCSTEIVDLGEACSLTNEAPCFIGAV---APXXXXXXXXXVPEPTXXXXXXXXXTDGGVCSN--GIHGVESKSGDYCCPTSCGVCDGADCAMGGD--GCCGDYIEKSGVMCDDSEVAPCIIDTDGMGNPTPXXXXXXTNPTDNADGKRRAPPLDGFRSDVCTGDIPGLESADGQVCCLAGCGQCGGSGCSTPGPASDCCVTEIVTSGVLCSETETAPCSFVDVFTA---TVSPTSAPT---VGMAPTAPSPGPDT-----------DTY--VGCHELVEYSNEEFDWDNLSSDSEMTPTVCSETCSSVNALYFGLYKGMKCVCGYDADFLAAEKSAGICDKPCMGDTSIYCGGFYAYDLYEL 3435 D C + GIPGI+S N ACCLA CG CGG GC+++G + +CC S+I + GE CSV +APC +D A +P+A XXXXXXXXXXXXXX C + GIPGI+S G ACC AEC CGG GC+++G +CC ++I D+GE CS T AAPC + G+ AM A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D + GIPGI+S N ACCLA CG CGG GC++ G + +CC S+I D GE CS+ +APC +D G+ P V +PT XXXXXXXXXXXXXXXX X GIP + C A C TC + C+ + +CC S ++ P VC++ GIPGI++ N ACCLA CG CGG GC++ G + +CC S+I GE CSV APC +DD + GIPGI++ N ACCLA CG CGG GC++ G +CC+S+I GE CSV APC +DD VC+ N I GIQ+ N ACC+AECG CGG GC+ +G +G D +CC +EI D GE CS T APC + +V AP X XXXXXXXXX C N GI GVES CCPTSC C G C+ G+ CC I G C+ S APC I G G P PT PP +C+ +PG+ESA G CC A C C G C G CC +I +GVLC ++E APC +D+ T +PT APT PT D+ D+Y VGC+ L ++ E + L + +MT +C E C++ +A YF L+KG C CG + +L GICD PC GD + CGG+Y YDLYEL Sbjct: 2226 DTCSN--GIPGIQSGN--ACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVTMAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTC--SNGIPGIQS--GNACCLAECDGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVTMAAPCVVD--GSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQSGN--ACCLAECGACGGSGCAELGGGLGEHNCCQSEIEDFGELCSLSLAAPCVVD---------GSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQTGNACCL---AECGTCGGRGCAEYGGGLGEDNCCQSEIEDFGELCSVTMEAPCVVDDVCSN--GIPGIQTGN--ACCLAECGTCGGRGCAEYGGGLGEDNCCQSEIEDFGELCSVTMEAPCVVDDVCSNGIPGIQTGN--ACCLAECGGCGGTGCAQLGGGLGADNCCMSEIEDFGELCSVTMEAPCVVDD--------------------------------------------------------VCS--NGIPGIQTGN--ACCLAECGGCGGTGCAQLGGGLGAD--NCCMSEIEDFGELCSATMTAPCIVDSVSGPAPSPVAMPTAXXXXXXXXXXXXXXXXXXSTCPNAGGIPGVESPGSSACCPTSCVSCGGVGCSSRGEVTDCCVSAIMTKGQACEVSGTAPCYI---GDGGEAPAPTPEPVRPTPVTMEPTTEPPAAPTTQGLCSNGVPGIESASGDYCCPATCRACDGDNCYLDGLF--CCGDDIEETGVLCDDSEEAPC-IIDIDGGGFGTYAPTGAPTGTPFDFDPTISGGNDDSMDVDIDGDGNVDSYEHVGCYALSPTASVELE--KLDGEEQMTKMLCFEACAAESADYFALFKGSVCTCGNEGGYLTMPMEMGICDTPCSGDVTATCGGYYDYDLYEL 3275
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE) HSP 1 Score: 233 bits (595), Expect = 1.110e-58 Identity = 279/739 (37.75%), Postives = 340/739 (46.01%), Query Frame = 1 Query: 790 GIPGIESSDGRACCEAECGQCGGDGCSKVGPA---SDCCVTDIVDYGEACSETKAAPCYIGKRGACMVVGRYAMTAATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARAAMVSVFDNFAGGIPGIESSNGQACCLASCGQCGGIGCSKAGK---DTDCCISDIVDAGEACSVKGSAPCYIDDDGTYGRESGACPPLRAVTVPTTVPTVEAAMAARVPTPTPLGAAXXXXXXXXXXXXXXXXETAVVMMAXAMTPATVSLEVLELFYVFGTAGIPPLSLIAFACSTNPAACSTCQPCSRFSYSHLSCCPSISYSPPGVCASAGGIPGIESSNGQACCLASCGQCGGDGCSKAGK---DTDCCISDIVLDGEACSVKGSAPCYID--------------------------------------------DGVAGGIPGIESSNGQACCLASCGQCGGDGCSKAGK---DTDCCISDIVHDGEACSVKGSAPCYIDDGDVPAPPTPIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDLVCAGANDITGIQSSNGRACCVAECGMCGGEGCSTIGASIGLDAHDCCSTEIVDLGEACSLTNEAPCFIGAVAPXXXXXXXXXVPEPTXXXXXXXXX----------------TDGGVCSNGIHGVESKSGDYCCPTSCGVCDGADCA-----MGGDGCCGDYIEKSGVMCDDSEVAPCIIDT 2775 GIPGI+S G ACC AECG CGG GC+++G +CC ++I D+GE CS AAPC + D + GIPGI+S N ACCLA CG CGG GC++ G + +CC S+I D GE CSVK +APC +D G+ P P+P + +AXXXXXXXXXXXXXXXX X + CS GIPGI+S N ACCLA CG CGG GC++ G + +CC S+I GE CSVK +APC +D D + GIPGI+S N ACCLA CG CGG GC++ G + +CC S+I GE CSVK +APC +D G PAP +P+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +DL +N I GIQ+ N ACC+AECG CGG GC+ G +G D+ CC +EI D G+ CS+T APC + AP XXXXXXXXX TD VCSNGI G+++ G CC CG C G CA +G D CC IE G +C + APCI+D+ Sbjct: 1579 GIPGIQS--GNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVD-------------------------------------------------------------DMCSNGIPGIQSGN--ACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVD---------GSAP---------------------APSPVAMPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXSDTCSN-------------------------------------GIPGIQSGN--ACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDMCSNGIPGIQSGN--ACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVD-GSAPAP-SPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NDLC---SNGIPGIQTGN--ACCLAECGTCGGRGCAEYGGGLGEDS--CCQSEIEDFGQLCSVTMAAPCVVDGSAPAPSPMAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTD--VCSNGIPGIQT--GSACCLAECGGCGGTGCAQLGGGLGADNCCQSEIEDFGALCSATMTAPCIVDS 2162
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE) HSP 1 Score: 174 bits (441), Expect = 2.090e-42 Identity = 165/462 (35.71%), Postives = 201/462 (43.51%), Query Frame = 1 Query: 1750 SAGGIPGIESSNGQACCLASCGQCGGDGCSKA-GKDTDCCISDIVLDGEACSVKGSAPCYIDDGVA------------------GGIPGIESSNGQACCLASCGQCGGDGCS-KAGKDTDCCISDIVHDGEACSVKGSAPCYIDDGDVPAPPTPIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDLVCAGANDITGIQSSNGRACCVAECGMCGGEGCSTIGASIGLDAHDCCSTEIVDLGEACSLTNEAPCFIGAVAPXXXXXXXXXVPEPTXXXXXXXXXT-DGGVCSNGIHGVESKSGDYCCPTSCGVCDGADCAM---GGDGCCGDYIEKSGVMCDDSEVAPCIIDTDGMGNPTPXXXXXXTNPTDNADGKRRAPPLDGFRSDVCTGDIPGLESADGQVCCLAGCGQCGGSGCS-TPGPASDCCVTEIVTSGVLCSETETAPC 3060 S G I GI+ N CC SCG CG +GCS A G CC ++++ G C G APC ID + GGI GI++ + CC ASCG CGG GCS + G CC + G CSV G APC PAP P XXXXXX G+ +C G I GIQ+ CC A CG CGG GCS G G DA CC + G C++T EAPC G P P XXXXXXXXXT + +C GI G+++K + CC SCG C G C+ G D CCG + SG +C + APCI T P + + +C G I G++++D VCC A CG C GSGCS G CC + SG CS T APC Sbjct: 62 STGDISGIQ--NKDVCCPVSCGMCGDEGCSTAPGGAASCCTTNVLDAGIEC---GEAPCVIDASSSTTPAPATPAPTSEVPMCDGGIVGIQAK--EVCCSASCGSCGGVGCSGRDGGSDACCGGGVTASGRLCSVTGEAPCITGPAPTPAPSPPXTVEGPAPTLEPXXXXXXPPA----------------------GEVPMCDGG--IVGIQAK--EVCCSASCGSCGGVGCS--GRDGGSDA--CCGGGVTASGRLCAVTGEAPCITGPA------------PTPEXXXXXXXXXTVEVPMCDGGIVGIQAK--EVCCSASCGSCGGVGCSGRDGGSDACCGGGVTASGRLCAVTGEAPCI-----------------TGPAPTPEXXXXXXXXXTVEAPMCDGGIIGIQTSD--VCCSASCGSCXGSGCSGRDGGPDACCGGGVRASGRFCSVTGEAPC 453
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Match: A0A6H5L879_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L879_9PHAE) HSP 1 Score: 171 bits (433), Expect = 1.690e-41 Identity = 146/465 (31.40%), Postives = 193/465 (41.51%), Query Frame = 1 Query: 1759 GIPGIESSNGQACCLASCGQCGGDGCSKAGKDT-----DCCISDIVLDGEACSVKGSAPCYIDDGV----------AGGIPGIESSNGQACCLASCGQCGGDGCSKAG-----KDTDCCISDIVHDGEACSVKGSAPCYIDDGDVPAPPTPIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDLVCAGANDITGIQSSNGRACCVAECGMCGGEGCSTIGASIGLDAHD-----CCSTEIVDLGEACSLTNEAPCFIGAVAPXXXXXXXXXVPEPTXXXXXXXXXTDGGVCSNGIHGVESKSGDYCCPTSCGVCDGADCAMGGDGCCGDYIEKSGVMCDDSEVAPCIIDTDGMGNPTPXXXXXXTNPTDNADGKRRAPPLDGFRSDVCTGDIPGLESADGQVCCLAGCGQCGGSGCSTPGPASDCCVTEIVTSGVLCSE--TETAPCSFVD 3072 GI GIES+NG CC A CG CGG C+KA D DCC SDI+ G +CS APC IDD A G+ GI S+NG CC + CG CGG C++A D DCC+SDI +G CS G+APC + D + + DL ++ +SS A + CG + T + LD+++ C+T AC + + C GA A +P C+ GI GVE+ SGD CCP SCG C G C +G GCC I+ +C+D+ APC+ + PTP PT R P+ CTGDIPGLES DG VCC+ C C CC +I+ +G++CS+ E PC ++ Sbjct: 55 GIEGIESTNGGVCCPALCGLCGGAACTKAAVDAGLDDGDCCFSDIIRFGASCSENQMAPCIIDDASKASAGNTCSNANGVEGISSANGDVCCPSECGLCGGRDCTQAALAAGLDDGDCCVSDITKEGVKCSDSGAAPCIVYDSEDETGSNQVREASTPVYITLGCGKIGDYEDPFTVSSTV--------------SDLTVEACYELCASESSLYFALVEGDVCSCGDQ--ETFVQTF-LDSYEEQTAGTCNT-------ACPGSPDETCG-GAQA----FDLYRILP----------------TCTGGIIGVEAASGDVCCPFSCGECGGDKC-VGEGGCCEHTIQSREGLCEDTNAAPCVFNVVAP-PPTPVPAPTTPMPT------RPPGPVS-----TCTGDIPGLESDDGTVCCMEHCASCRIESADECAGVPACCQEKILLTGLMCSDEGVEEGPCILIE 461
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI) HSP 1 Score: 171 bits (432), Expect = 1.010e-40 Identity = 167/446 (37.44%), Postives = 197/446 (44.17%), Query Frame = 1 Query: 1795 CCLASCGQCGGDGCS-KAGKDTDCCISDIVLDGEACSVKGSAPCYIDDGVAGGIPGIESSNGQACCLASCGQCGGDGCS-KAGKDTDCCISDIVHDGEACSVKGSAPCYIDDGDVPAPPTPIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDLVCAGANDITGIQSSNGRACCVAECGMCGGEGCSTIGASIGLDAHDCCSTEIVDLGEACSLTNEAPCFIGAVAPXXXXXXXXXVPEPTXXXXXXXXXT-DGGVCSNGIHGVESKSGDYCCPTSCGVCDGADCAM--GGDG-CCGDYIEKSGVMCDDSEVAPCIIDTDGMGNPTPXXXXXXTNPTDNADGKRRAPPLDGFRSDVCTGDIPGLESADGQVCCLAGCGQCGGSGCS-TPGPASDCCVTEIVTSGVLCSETETAPCSFVDVFTATVSPTSAPT 3111 CC ASCG CGG GCS + G CC + G CSV G APC GGI GI++S+ CC ASCG C G GCS + G CC + G CSV G APC PAP TP XXXXXXX +C G I GIQ+S+ CC A CG CGG GCS+ G CC + G CS+T EAPC GA P P XXXXXXXXXT + +C GI G+++ D CC TSCG C G C+ GG G CCG + SG C + APC+ T P C G I G++++D VCC C CGGSGCS G +CC + SG CS T APC +T +PT APT Sbjct: 59 CCSASCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTVPMCDGGIVGIQASD--VCCSASCGSCAGTGCSGRDGGSGACCGGGVQASGRYCSVTGEAPCMTG----PAP-TPXXXXXXXXXXTVEVP--------------------------------MCDGG--IVGIQTSD--VCCSASCGSCGGTGCSSRDGGSGA----CCGGGVRASGRYCSVTGEAPCMTGAA------------PTPEXXXXXXXXXTVEVPMCDGGIVGIQTS--DVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCM-----------------TVPK-------------------CDGGIVGIQASD--VCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSPEPSTPAPTPAPT 405
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Match: D7FJ60_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ60_ECTSI) HSP 1 Score: 159 bits (402), Expect = 5.810e-38 Identity = 149/468 (31.84%), Postives = 189/468 (40.38%), Query Frame = 1 Query: 1759 GIPGIESSNGQACCLASCGQCGGDGCSKAG-----KDTDCCISDIVLDGEACSVKGSAPCYIDDGV---AG-------GIPGIESSNGQACCLASCGQCGGDGCSKAG-----KDTDCCISDIVHDGEACSVKGSAPCYI-DDGDVPAPPTPIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDLVCAGANDITGIQSS------NGRACCVAECGMCGGEGCSTIGASIGLDAHD-----CCSTEIVDLGEACSLTNEAPCFIGAVAPXXXXXXXXXVPEPTXXXXXXXXXTDGGVCSNGIHGVESKSGDYCCPTSCGVCDGADCAMGGDGCCGDYIEKSGVMCDDSEVAPCIIDTDGMGNPTPXXXXXXTNPTDNADGKRRAPPLDGFRSDVCTGDIPGLESADGQVCCLAGCGQCGGSGCSTPGPASDCCVTEIVTSGVLCSE--TETAPC 3060 GI GIES+NG CC +CG CGG+ C++A D DCC DI++ G +CS APC IDD AG G+ GI S +G CC + C CGG C++A D DCC+SDI +G CS G+APC D D P +A DL ++ +SS G C CG E T + LD +D CST AC + + C GA A +P C+ GI GVE+ SGD CCP SCG C G C +G GCC I+ +C+ + APC+ + PTP PT R P+ CTGDIPGLES DG VCC+ C C CC +I+ +GV CS+ E PC Sbjct: 55 GIEGIESANGDVCCPTACGFCGGEACTEAAVNAGLDDGDCCFGDIIVSGASCSENQMAPCIIDDASQESAGDTCSNTDGVEGISSGDGDVCCPSECVLCGGRDCTEAALAAGLADGDCCVSDITKEGVKCSDSGAAPCVAYDSEDETGSPLVQEASTPVYIALGCGKIGDYEDPFTVSSTV---------------SDLTAEACYELCASESSLYFGLVEGNVC------SCGDE--ETFVETF-LDTYDEQTAATCST-------ACPGSPDETCG-GAQA----FDLYQILP----------------TCTGGIVGVEAASGDVCCPFSCGECGGDRC-VGEGGCCEHTIQSREDLCEYTNAAPCVFNVVAP-PPTPVPAPTTPMPT------RPPGPVS-----TCTGDIPGLESDDGTVCCMEHCSSCRIESADQCVGVPACCQEKILLTGVKCSDEGVEEGPC 457
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE) HSP 1 Score: 146 bits (369), Expect = 3.410e-32 Identity = 145/395 (36.71%), Postives = 168/395 (42.53%), Query Frame = 1 Query: 1948 GIPGIESSNGQACCLASCGQCGGDGCSKAGK-----DTDCCISDIVHDGEACSVKGSAPCYIDDGDVPAPPTPIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDLVCAGANDITGIQSSNGRACCVAECGMCGGEGCSTIGASIGLDAHDCCSTEIVDLGEACSLTNEAPCFIGAVAPXXXXXXXXXVPEPTXXXXXXXXXTDGGVCSNGIHGVESKSGDYCCPTSCGVCDGADCAMGG-------DGCCGDYIEKSGVMCDDSEVAPCIIDTDGMGNPTPXXXXXXTNPTDNADGKRRAPPLDGFR-------SDVCTGDIPGLESADGQVCCLAGCGQCGGSGCSTPGP-----ASDCCVTEIVTSGVLCSETETAPC 3060 GI GI+ NG CC CGQC G GCS AG + CC I G C G APC AP T XXXXXXX ++ I GI NG CC CG C G GCS GA+ GL + CC I G C T APC G+ AP XXXXX XXXXXXXXX D G CS+GI G++ G CCP CG C G+ C G CCG I+ SG CDD+ VAPCI + NAD + C+ D+ G++ G+VCC GCGQCGGSGCST G A CC +E+ SG C + APC Sbjct: 473 GIEGIDG-NGVVCCPLGCGQCAGSGCSIAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGS----APDTDXXXXXXXXXXIGTC-------------------------------------SDGIEGIDG-NGVVCCPLGCGQCAGSGCSIAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGS-APNADDXXXXXXXX-XXXXXXXXXXXDVGTCSDGIEGIDGN-GVVCCPLGCGQCAGSGCGAAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGS-----------------APNADDDXXXXXXXXXXXXXXXXXATTCSNDLEGIDHK-GEVCCPLGCGQCGGSGCSTSGASNGLGAESCCSSEVKDSGRYCDDANEAPC 803
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE) HSP 1 Score: 144 bits (364), Expect = 7.880e-32 Identity = 126/343 (36.73%), Postives = 153/343 (44.61%), Query Frame = 1 Query: 1756 GGIPGIESSNGQACCLASCGQCGGDGCS-KAGKDTDCCISDIVLDGEACSVKGSAPCYIDDGVAGGIPGIESSNGQACCLASCGQCGGDGCSKA-GKDTDCCISDIVHDGEACSVKGSAPCYIDDGDVPAPPTPIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDLVCAGANDITGIQSSNGRACCVAECGMCGGEGCSTIGASIGLDAHDCCSTEIVDLGEACSLTNEAPCFIGAVAPXXXXXXXXXVPEPTXXXXXXXXXT-DGGVCSNGIHGVESKSGDYCCPTSCGVCDGADCAM---GGDGCCGDYIEKSGVMCDDSEVAPCI 2766 G I GI+SS+ CC ASCG CGG GC+ + G CC + G CS+ G APC G I GI+SS+ CC ASCG CGG GC++ G CC + G CS+ G APC G P P XXXX +C G DI GIQSS+ CC A CG CGG GC+ + CC + G CS+T EAPC G P P XXXXXXXXXT + +C I G++S D CC SCG C G+ C G + CCG + SG C + APC+ Sbjct: 4 GDIVGIQSSD--VCCSASCGSCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTVPMCDGDIVGIQSSD--VCCSASCGSCGGSGCTERDGGSESCCGGGVRASGRYCSITGEAPCMT--GPAPTPDXXXXXXXXXTVEVP-----------------------------------MCDG--DIVGIQSSD--VCCSASCGSCGGSGCTERDGG----SESCCGGGVRASGRYCSITGEAPCMTGPA------------PTPDXXXXXXXXXTVEVPMCDGDIVGIQSS--DVCCSASCGTCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCM 283
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Match: D7FHN7_ECTSI (von Willebrand A domain containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN7_ECTSI) HSP 1 Score: 129 bits (325), Expect = 1.550e-29 Identity = 83/209 (39.71%), Postives = 105/209 (50.24%), Query Frame = 1 Query: 340 DVCPSAGGIPGIESSNGQACCLASCGQCGGFGCS-KVGKDTDCCISDIVEEGEACSVKGSAPCYID-DVCRAGVVPSAVHDQPCVVAGEPTWPLLSRNFAAAMTAATLTAPTMAVVTALTRRXXXXXXXXXXXXXXPTPARVAMVRVCPSAGGIPGIESSDGRACCEAECGQCGGDGCSKVGPASDCCVTDIVDYGEACSETKAAPCYI 960 D+ + G+ GIESSNG+ACC +CG CGG GCS + G DCC S+IVEEGEAC+ G++PCYID D VVPS VV E P F + C + G+PG+ES+ G CC A+CGQCGG GC + G DCC+T+I+DYG+ CSE APCY+ Sbjct: 103 DIERCSNGVYGIESSNGKACCALTCGSCGGVGCSGRPGGSYDCCESEIVEEGEACAATGASPCYIDGDEVLDPVVPSMSP----VVPEETDMP---SGFGGGS-----------------------YSYSYDFVSWDGDSMDDQFMWCTN--GVPGMESAGGEVCCPADCGQCGGVGCGEFG--EDCCITEIMDYGQPCSEIGTAPCYL 277
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Match: D7FIS5_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS5_ECTSI) HSP 1 Score: 112 bits (280), Expect = 9.560e-22 Identity = 108/279 (38.71%), Postives = 119/279 (42.65%), Query Frame = 1 Query: 1759 GIPGIESSNGQACCLASCGQCGGDGCSKAGK-----DTDCCISDIVLDGEACSVKGSAPCYI-------DDGV----------------AGGIPGIESSNGQACCLASCGQCGGDGCSKAGK-----DTDCCISDIVHDGEACSVKGSAPCYIDDGDVPAPPTPIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDLVCAGANDITGIQSSNGRACCVAECGMCGGEGCSTIGASIGLDAHDCCSTEIVDLGEACSLTNEAPCFI 2496 GI G++ NG CC CGQC G GCS AG + CC I G C G APC DD + GI G++ NG CC CGQC G GCS AG + CC I G C G APC G P XXXXXXXXXXXXXXX + C+ N + GI G CC CG CGG GCST GAS GL A CCS+EI D G C TNEAPC I Sbjct: 363 GIEGLDG-NGVVCCPLGCGQCAGSGCSTAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGSAPDAGDDXXXXXXXXXXXXXXVGTCSDGIEGLDG-NGVVCCPLGCGQCAGSGCSTAGAANGLTSSSCCGGRIKSSGNYCDDTGVAPCIY--GSAP----------------------------NADDXXXXXXXXXXXXXXXXXXENTCS--NGLEGIDHK-GEVCCPLRCGQCGGSGCSTSGASNGLGADSCCSSEINDSGRHCDDTNEAPCII 606 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5697.14072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5697.14072.1 >prot_L-elsbetiae_contig5697.14072.1 ID=prot_L-elsbetiae_contig5697.14072.1|Name=mRNA_L-elsbetiae_contig5697.14072.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1155bp APVASPVAAPVAEPTAPTADSSDSSDSGDAPVASPVPAPVAEPTAPTADSback to top mRNA from alignment at L-elsbetiae_contig5697:2300..10584- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5697.14072.1 ID=mRNA_L-elsbetiae_contig5697.14072.1|Name=mRNA_L-elsbetiae_contig5697.14072.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8285bp|location=Sequence derived from alignment at L-elsbetiae_contig5697:2300..10584- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5697:2300..10584- >mRNA_L-elsbetiae_contig5697.14072.1 ID=mRNA_L-elsbetiae_contig5697.14072.1|Name=mRNA_L-elsbetiae_contig5697.14072.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6930bp|location=Sequence derived from alignment at L-elsbetiae_contig5697:2300..10584- (Laminarionema elsbetiae ELsaHSoW15)back to top |