mRNA_L-elsbetiae_contig5694.14066.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5694.14066.1
Unique NamemRNA_L-elsbetiae_contig5694.14066.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Match: D7G168_ECTSI (L-ascorbate peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G168_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 3.040e-105
Identity = 161/200 (80.50%), Postives = 170/200 (85.00%), Query Frame = 2 
Query:  833 AQSYTRDRLVTALKECKEALAGMIDKTNSHPIMIRLAWHDAGTYNKDSTEGWPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQLASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDADNAQVSFVFPLAVFLVSCFPSFCDHLRNVFYRMGFGDEGIVALSGAHTLGRAFK 1432
            + + + D  V AL+ECK+ LAGMIDKTNSHPIMIRLAWHDAGTYNKDSTEGWPR GGANGSIRFEPEINHGANAGLTTAL+LL PIKKK+EEVGWADLMQLASATAVEVAGGP I+MKYGRKDAV PEDCVDEG+LPAGNKPFPDADNAQ                   DHLRNVFYRMGFGDEGIVALSGAHTLGRAFK
Sbjct:   84 SSAVSTDAKVAALQECKKELAGMIDKTNSHPIMIRLAWHDAGTYNKDSTEGWPRQGGANGSIRFEPEINHGANAGLTTALKLLTPIKKKFEEVGWADLMQLASATAVEVAGGPAIDMKYGRKDAVAPEDCVDEGSLPAGNKPFPDADNAQ-------------------DHLRNVFYRMGFGDEGIVALSGAHTLGRAFK 264
[Close]
BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Match: D7FZA8_ECTSI (Ascorbate peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA8_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 1.700e-76
Identity = 126/179 (70.39%), Postives = 145/179 (81.01%), Query Frame = 2 
Query:  914 NSHPIMIRLAWHDAGTYNKDSTEGWPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQLASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDAD---NAQVSFVFPLAVFLVSCFPSF-CDHLRNVFYRMGFGDEGIVALSGAHTLGRAFKVS 1438
            + +PI+IRLAWHDAGT+NKDS E WPR GGANGSIRFEPEINH AN GL   L+LL+P+K KY EVGWADL+QLASATAVE AGGPVI+M+YGRKDA  P+DCVDEGNLPAG+ PFPDAD   NA+  F   L+  L+    +    HLRNVFYRMGFGDEGIVALSGAHTLGRA +++
Sbjct:    8 DDNPILIRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPDADTPQNARHGFFRSLSWMLLLPVDTMETAHLRNVFYRMGFGDEGIVALSGAHTLGRAGQLN 186
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BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Match: A0A835ZE60_9STRA (Heme peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE60_9STRA)

HSP 1 Score: 236 bits (601), Expect = 3.140e-70
Identity = 125/208 (60.10%), Postives = 140/208 (67.31%), Query Frame = 2 
Query:  815 RGQGATAQSYTRDRLVTA--LKECKEALAGMIDKTNSHPIMIRLAWHDAGTYNKD-STEGWPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQLASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDADNAQVSFVFPLAVFLVSCFPSFCDHLRNVFYRMGFGDEGIVALSGAHTLGRAF 1429
            R Q +  +S    ++VT   L E +EAL  +ID TN  PIM+RLAWHD+GTYNKD     WPR GGANGSIRFEPEINHGANAGL   L+LL+PI KK+  VGWADL+QLASATAVEVAGGP I+M+YGRK    PE C DEG LPA   PFPD                    P    HLR VFYRMGF D GIVALSGAHTLGRA+
Sbjct:   31 RAQLSAVRSSAGMQMVTKEELLEAREALVKLIDSTNCAPIMVRLAWHDSGTYNKDIPVSEWPRCGGANGSIRFEPEINHGANAGLVNGLKLLEPIHKKHPNVGWADLLQLASATAVEVAGGPKIDMRYGRKTVESPEGCADEGYLPAAAAPFPDGS------------------PEPQGHLRKVFYRMGFDDRGIVALSGAHTLGRAY 220
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BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Match: D7G488_ECTSI (Ascorbate peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G488_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.130e-67
Identity = 114/158 (72.15%), Postives = 122/158 (77.22%), Query Frame = 2 
Query:  959 TYNKDSTEGWPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQLASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDADNAQVSFVFPLAVFLVSCFPSFCDHLRNVFYRMGFGDEGIVALSGAHTLGRAFK 1432
            T+NKDS E WPR GGANGSIRFEPEINHGANAGL  ALQLL+PIK K+ EVGWADL+QLASA A+E AGGPVI+MKYGRKDA  P+ CVDEG+LPAGN PFPDAD  Q                    HLRNVFYRMGFGDEGIVALSGAHTLGRA K
Sbjct:    5 TFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQA-------------------HLRNVFYRMGFGDEGIVALSGAHTLGRAKK 143
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BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Match: A0A6S9GC78_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GC78_HETAK)

HSP 1 Score: 229 bits (583), Expect = 1.400e-67
Identity = 122/204 (59.80%), Postives = 140/204 (68.63%), Query Frame = 2 
Query:  827 ATAQSYTRDRLVTA--LKECKEALAGMIDKTNSHPIMIRLAWHDAGTYNKDSTEGWPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQLASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDADNAQVSFVFPLAVFLVSCFPSFCDHLRNVFYRMGFGDEGIVALSGAHTLGRAFK 1432
            A      R  +VTA  LKECKE+L  MID+TNS+PIMIRLAWHD+GT++    E WP+ GGA GSIRF+PEI HGANAGLTTAL+LL+PIK K+  VGWADLMQ+ASA +VE+AGGP I MKYGR DA  PEDC  EGNLP    PF D                        +H+R VF RMGF D+ IVALSGAHTLGRAFK
Sbjct:   33 ARFSQVNRLSMVTADELKECKESLKDMIDRTNSNPIMIRLAWHDSGTHDASIKE-WPQCGGAIGSIRFDPEITHGANAGLTTALKLLEPIKAKHPSVGWADLMQMASAVSVELAGGPTIPMKYGRVDAQGPEDCSPEGNLPGAAAPFDDGCATPQ------------------EHIRKVFGRMGFNDQEIVALSGAHTLGRAFK 217
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BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Match: A0A7S2V2W5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2W5_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.560e-65
Identity = 115/191 (60.21%), Postives = 128/191 (67.02%), Query Frame = 2 
Query:  860 VTALKECKEALAGMIDKTNSHPIMIRLAWHDAGTYNKDSTEGWPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQLASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDADNAQVSFVFPLAVFLVSCFPSFCDHLRNVFYRMGFGDEGIVALSGAHTLGRAFK 1432
            V   KECK AL  MIDKTNS+PIMIRLAWHD+GT++K  T  WP +GGA GSIRF PEI HGANAGLTTA++LL PIK K+  V WADLMQ+ASA  VE+AGGP I MKYGR D      C  EGNLP    PF D  N                     +HLR VFYRMGF D+ IVALSGAHTLGRA+K
Sbjct:   47 VDEYKECKAALEEMIDKTNSNPIMIRLAWHDSGTFDKGVTGEWPAAGGAVGSIRFSPEIEHGANAGLTTAIKLLTPIKNKFPNVSWADLMQMASAAGVELAGGPKIPMKYGRVDVEDSSGCSPEGNLPGAAAPFDDGCNTPQ------------------EHLRKVFYRMGFNDQEIVALSGAHTLGRAWK 219
[Close]
BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Match: A0A7S1P6M8_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1P6M8_9ALVE)

HSP 1 Score: 226 bits (575), Expect = 3.200e-64
Identity = 114/198 (57.58%), Postives = 135/198 (68.18%), Query Frame = 2 
Query:  842 YTRDRLVTALKECKEALAGMIDKTNSHPIMIRLAWHDAGTYN-KDSTEGWPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQLASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDADNAQVSFVFPLAVFLVSCFPSFCDHLRNVFYRMGFGDEGIVALSGAHTLGRAFK 1432
            Y     V  L+EC+E L  M+D+ N HPI+IRLAWHD+GTY+ K     WP  GGANGSIRFEPEINHGANAGL  AL LLKPIK  + E+ WADLMQ+ASATA+EVAGGP I M+YGR DA  P++C  EGNLPAG  P+P + +                      HLR+VF+RMG  D+ IVALSGAHTLGRA+K
Sbjct:  251 YIDPPTVERLQECQEVLKKMVDEVNCHPILIRLAWHDSGTYDAKMPMTDWPNCGGANGSIRFEPEINHGANAGLQNALNLLKPIKASFPEISWADLMQMASATAIEVAGGPKIPMRYGRLDAWAPKNCPKEGNLPAGGAPWPGSASTPQ------------------QHLRDVFHRMGLSDKDIVALSGAHTLGRAYK 430
[Close]
BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Match: A0A7S2UZG1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZG1_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.550e-62
Identity = 112/205 (54.63%), Postives = 136/205 (66.34%), Query Frame = 2 
Query:  821 QGATAQSYTRDRLVTALKECKEALAGMIDKTNSHPIMIRLAWHDAGTYNKD-STEGWPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQLASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDADNAQVSFVFPLAVFLVSCFPSFCDHLRNVFYRMGFGDEGIVALSGAHTLGRAFK 1432
            + A AQ +   ++  +L+ CK+ +  +ID TNSHPIM+RLAWHD+GTY+KD   E WP+ GGANGSIRF PEI HGANAGL  AL LLKPIK+++ E+ WAD++Q+ASA AV +AGGP I MKYGR DA    D   EGNLP+  KPF D                         HLRN+F RMGF D+ IVALSGAHTLGRA K
Sbjct:   11 RSACAQEF---QMKESLEACKKEIRTLIDTTNSHPIMVRLAWHDSGTYDKDVGIENWPKCGGANGSIRFSPEIEHGANAGLQGALDLLKPIKEQFSEISWADIIQMASAEAVHLAGGPQIPMKYGRLDAEAGFDK--EGNLPSAQKPFHDGAKGPEK------------------HLRNIFGRMGFSDKDIVALSGAHTLGRAHK 192
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BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Match: A0A0G4FGS3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FGS3_VITBC)

HSP 1 Score: 226 bits (575), Expect = 1.470e-61
Identity = 114/198 (57.58%), Postives = 135/198 (68.18%), Query Frame = 2 
Query:  842 YTRDRLVTALKECKEALAGMIDKTNSHPIMIRLAWHDAGTYN-KDSTEGWPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQLASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDADNAQVSFVFPLAVFLVSCFPSFCDHLRNVFYRMGFGDEGIVALSGAHTLGRAFK 1432
            Y     V  L+EC+E L  M+D+ N HPI+IRLAWHD+GTY+ K     WP  GGANGSIRFEPEINHGANAGL  AL LLKPIK  + E+ WADLMQ+ASATA+EVAGGP I M+YGR DA  P++C  EGNLPAG  P+P + +                      HLR+VF+RMG  D+ IVALSGAHTLGRA+K
Sbjct:  318 YIDPPTVERLQECQEVLKKMVDEVNCHPILIRLAWHDSGTYDAKMPMTDWPNCGGANGSIRFEPEINHGANAGLQNALNLLKPIKASFPEISWADLMQMASATAIEVAGGPKIPMRYGRLDAWAPKNCPKEGNLPAGGAPWPGSASTPQ------------------QHLRDVFHRMGLSDKDIVALSGAHTLGRAYK 497
[Close]
BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Match: X6NCD2_RETFI (PEROXIDASE_4 domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NCD2_RETFI)

HSP 1 Score: 206 bits (525), Expect = 1.280e-60
Identity = 104/199 (52.26%), Postives = 130/199 (65.33%), Query Frame = 2 
Query:  824 GATAQSYTRDRLVTALKECKEALAGMIDKTNSHPIMIRLAWHDAGTYNKDSTEGWPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQLASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDADNAQVSFVFPLAVFLVSCFPSFCDHLRNVFYRMGFGDEGIVALSGAHTLG 1420
            G     Y R+     LKEC++ L   IDK N +PI++RLAWHD+GTY++ +   WP  GGANGSIRF+ E+ HGANAGL  A+  LKP K+KY++V WADL+QLAS  A+E AGGPVI +++GR D  + ++C  EGNLPA N PFPD+                   P    HLR VFYRMGF D+ IVALSGAHTLG
Sbjct:   30 GQAQNDYVRN-YRKQLKECRDELWKFIDKENCNPILVRLAWHDSGTYDR-TIRSWPTCGGANGSIRFDTELKHGANAGLAKAVNYLKPFKQKYKDVSWADLIQLASVIAIEHAGGPVIPIRFGRVDTAEEKECPKEGNLPAANPPFPDSS------------------PDAAVHLRRVFYRMGFDDKDIVALSGAHTLG 208
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5694.14066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G168_ECTSI3.040e-10580.50L-ascorbate peroxidase n=2 Tax=Ectocarpus TaxID=28... [more]
D7FZA8_ECTSI1.700e-7670.39Ascorbate peroxidase n=1 Tax=Ectocarpus siliculosu... [more]
A0A835ZE60_9STRA3.140e-7060.10Heme peroxidase n=1 Tax=Tribonema minus TaxID=3033... [more]
D7G488_ECTSI1.130e-6772.15Ascorbate peroxidase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A6S9GC78_HETAK1.400e-6759.80Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2V2W5_9STRA2.560e-6560.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1P6M8_9ALVE3.200e-6457.58Hypothetical protein (Fragment) n=1 Tax=Vitrella b... [more]
A0A7S2UZG1_9STRA1.550e-6254.63Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0G4FGS3_VITBC1.470e-6157.58Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
X6NCD2_RETFI1.280e-6052.26PEROXIDASE_4 domain-containing protein n=1 Tax=Ret... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5694contigL-elsbetiae_contig5694:199..6356 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score329.3
Seed ortholog evalue1.6e-87
Seed eggNOG ortholog2880.D7G168
Preferred nameAPX7
KEGG rclassRC00092
KEGG koko:K00434
KEGG ReactionR00644
KEGG Pathwayko00053,ko00480,map00053,map00480
Hectar predicted targeting categoryother localisation
GOsGO:0000302,GO:0003674,GO:0003824,GO:0004130,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009409,GO:0009507,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009631,GO:0009636,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0010019,GO:0010033,GO:0016020,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0023052,GO:0031976,GO:0031984,GO:0033554,GO:0034357,GO:0034599,GO:0042221,GO:0042651,GO:0042737,GO:0042743,GO:0042744,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055035,GO:0055114,GO:0065007,GO:0070887,GO:0071588,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748
EggNOG free text desc.Belongs to the peroxidase family
EggNOG OGs2QS7Q@2759,COG0685@1
Ec32 ortholog descriptionL-ascorbate peroxidase
Ec32 orthologEc-02_001210.2
EC1.11.1.11
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionascorbate peroxidase
Ec32 orthologEc-02_001740.1
Exons6
Model size1450
Cds size765
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816607.35156-CDS-L-elsbetiae_contig5694:198..3091622816607.35156-CDS-L-elsbetiae_contig5694:198..309Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 199..309 -
1691683680.9631772-CDS-L-elsbetiae_contig5694:198..3091691683680.9631772-CDS-L-elsbetiae_contig5694:198..309Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 199..309 -
1622816607.3641212-CDS-L-elsbetiae_contig5694:1673..18491622816607.3641212-CDS-L-elsbetiae_contig5694:1673..1849Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 1674..1849 -
1691683680.9792516-CDS-L-elsbetiae_contig5694:1673..18491691683680.9792516-CDS-L-elsbetiae_contig5694:1673..1849Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 1674..1849 -
1622816607.3738322-CDS-L-elsbetiae_contig5694:2307..24731622816607.3738322-CDS-L-elsbetiae_contig5694:2307..2473Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 2308..2473 -
1691683680.9912965-CDS-L-elsbetiae_contig5694:2307..24731691683680.9912965-CDS-L-elsbetiae_contig5694:2307..2473Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 2308..2473 -
1622816607.384521-CDS-L-elsbetiae_contig5694:2911..29521622816607.384521-CDS-L-elsbetiae_contig5694:2911..2952Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 2912..2952 -
1691683681.0007575-CDS-L-elsbetiae_contig5694:2911..29521691683681.0007575-CDS-L-elsbetiae_contig5694:2911..2952Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 2912..2952 -
1622816607.3955564-CDS-L-elsbetiae_contig5694:3682..37791622816607.3955564-CDS-L-elsbetiae_contig5694:3682..3779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 3683..3779 -
1691683681.0109637-CDS-L-elsbetiae_contig5694:3682..37791691683681.0109637-CDS-L-elsbetiae_contig5694:3682..3779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 3683..3779 -
1622816607.4077225-CDS-L-elsbetiae_contig5694:5497..56711622816607.4077225-CDS-L-elsbetiae_contig5694:5497..5671Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 5498..5671 -
1691683681.0207286-CDS-L-elsbetiae_contig5694:5497..56711691683681.0207286-CDS-L-elsbetiae_contig5694:5497..5671Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 5498..5671 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816607.4179657-UTR-L-elsbetiae_contig5694:5671..63561622816607.4179657-UTR-L-elsbetiae_contig5694:5671..6356Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5694 5672..6356 -
1691683681.0306122-UTR-L-elsbetiae_contig5694:5671..63561691683681.0306122-UTR-L-elsbetiae_contig5694:5671..6356Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5694 5672..6356 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5694.14066.1prot_L-elsbetiae_contig5694.14066.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5694 199..5671 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5694.14066.1

>prot_L-elsbetiae_contig5694.14066.1 ID=prot_L-elsbetiae_contig5694.14066.1|Name=mRNA_L-elsbetiae_contig5694.14066.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp
MQGLSKPSPLKRHKSSSPENPPAKKRPAEITAGPGNSDSPHCPRGQGATA
QSYTRDRLVTALKECKEALAGMIDKTNSHPIMIRLAWHDAGTYNKDSTEG
WPRSGGANGSIRFEPEINHGANAGLTTALQLLKPIKKKYEEVGWADLMQL
ASATAVEVAGGPVIEMKYGRKDAVKPEDCVDEGNLPAGNKPFPDADNAQV
SFVFPLAVFLVSCFPSFCDHLRNVFYRMGFGDEGIVALSGAHTLGRAFKV
SWWM*
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mRNA from alignment at L-elsbetiae_contig5694:199..6356-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5694.14066.1 ID=mRNA_L-elsbetiae_contig5694.14066.1|Name=mRNA_L-elsbetiae_contig5694.14066.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6158bp|location=Sequence derived from alignment at L-elsbetiae_contig5694:199..6356- (Laminarionema elsbetiae ELsaHSoW15)
CGTCACTTTTTATGTCTATCGTCTCCGTGTCACTTTTCTCGGTCTGCCTG
CCTGCCTGCCTGTAGCTCTCCCTCTCCGTCGGTGAAGTACATGTTTAAGA
TGGATCTGCGTTCTTTGCGCGTGAGTCGGTATAATACCTCAAAGATTTGG
GGTACTTACTCCGTAAGCAAAATGAGAAAAAAAAATTATTCATGCACATC
TGTATGTATGTATGTAGTTGTCAGACTATATAAATTATTTGCCAAGTGCG
GAGGGTTTTCGTCTGTAGTCTTCACACACTTACAAAACACACATCCTACA
ATACCTGTCTACCGTTGTACATCTGTCAACCGTCGACGACAGTCAGAGCG
AGTTCCTCCTCTCCCCCTTCATCATTACACCATTACTGCCTTTTTCCCCC
ACACGTCGAAGAGTATCCAGAGAAACTGCTGTGTAAGCAAGATCGGTGTA
CGTTCTGTGCGGGATCGGTACATAATGCGCGGGATATTTTTTTGGAAATA
AATGTTGTGCGAAGTGCGGAGGGTTTCCGTGTAAAGAACATTCATGTGTA
TATATATGTGTATAGGAATGCAGGAGGATTTGGATGCGTTGGCGATTAAA
TACGTGACCATATGTTCCGACTGCCGAAAGCACCTCCCTAGCCCCCTCTT
CCCTCTTCATTATACCACACACCTCCTGAAGCAACATGCAAGGGCTCTCC
AAGCCTTCGCCTCTCAAGCGTCATAAATCATCTTCCCCGGAAAACCCTCC
TGCTAAGAAGAGGCCTGCGGAAATCACAGCTGGGCCCGGCAACTCCGACT
CGCCGCACTGCCCCCGAGGGCAGGGTGCTACGGCCCAAAGCTATACGCGA
GACAGATTGGTACGCAACTTGATTATCTGCGAATTTGGATCGCTCTGCCA
AAACACACACTCCACACAATATACTAGCACGATGCTTGCATTCCTCATCA
ACGAAGGACGGGGGGGCGCGGTTTTTTTTTTGTTGTTGCGGATAATACCC
ACACGTCTACCAGCGTTGAAACAGGGGAGATGTTCGAATTGTTCCGATAT
TTTAGGTGTTTTTCTACTTGACTGGACCATATTACGTCACCATATGGCCT
AAGGGTTTGAGCCCACAGAGTCCCCGCTCTGATGCGGGCCACTGGGTTCC
GTTTCGGATCTAGTAACAACGTGCTTTTAGTGGATCCGGTGCCAAGAACG
AAGTGTGTAGCGCCACACTGACACTTTGCAAAAAGCTAAAATGTGCAGTA
CTATGATCGTGCGGAATGACCCTCACCAAAAACTGGTTCCGATAATCATG
GTCGTAAATATGAAACGCATGCTGGAGTACACACATCAAACATACAGAGA
TCTTATCGCAGCCGCGGCTTTTCACACGTTTTATCGTCTCCCGATCGACA
CCAAGGCGATCAACCATCCATCTCTGTACACTCTATTTGCTTCGTCGTCT
TTGTAAATAATTTATGTGGCTGACTAGTCTTTGGTTCAGGAGATAGCCCC
TCTAACCTGACAGTAAACCCAACCCGTACACCACTTTAGATGACTCGCGC
CCCAACTTCATGCAGCAGGCGGGTTGGTAGGCGACGGGGCCTCGAGTGCG
CAGGCAACAAGCACTAAGCACAACCGGTCTTGTCTCGCAAAAACAAGTAT
CTCCCGGCACTGGACGTCGATGCATACACACACACACATACATACATTGA
ACGCGATTTCGTTGGTGAATAATACTTCGACTTCATTGTTGATGAGAGTG
GGGAGTACTGAACCCTGCCTTCTCGCGATAAAAACATAAGAGGCAGGCAC
CGCAGGAGGGGGTCCACACCCCCCCCCCCTCCTCCGTGTCCCCGGTTGGG
TCGTCTAGCTAAAAAATCGTCTGTGGGTTAGGTTCCATTTTTGATTAACT
GTTTTATTTTCAAAATAGTCGTAGTGGAGGCAGGGGGCCAGCGGGGCAGA
CGACAAAGAGGCCAAAAATGGATGAAAAAAATGGATGATGTGGTCGAAAT
GTAGAATTCAACAGTGGGGTGGGCTACGACAGATAGAAGACACCCGGGCG
CTGTCCGCCAAAAAAATATCCACTCTGGGTTGTTGTTTGTGGGCACTTGG
GGAGATCCAGCCGCTCTCAGTGCGTGTTGCGTGTGCCGCGGCTGTGCCCT
TCATCTAGTCGCGCCGCAACTCATGTTCTGTCGGTCTGGTCTCGTCCATC
TCCGTGCGCAAGTAGATACTCCCATACAAGTACCAGGTTCCCCTTTCAGA
CGTCGCTCATGGCTGGAACAAGTCAGGGGGGTGAAGCAAGAGAACAGTGT
TGATTGCTGCTCGAGTTGCACAACACTATGATTTGCCGTGTCACACCAAA
GAGCCAGAACTGGCGTGCGTCGCCAGCCTGAAAAGCCTGGTTCCAGCGCG
TGGCTTGACCCGATACCTCACAGACCCTGCACCCAGGGAAATCTCAAATC
TGTATTATAGTCATGCGTCAACCACCACTTTTTTTCTGTTTTCCTTTTCT
CACTTATTTGTTCCTTTTCCCGTCTTCCGTGCGTTGCGTCTGTGGTTGCA
TTTATTGCCGTGGGCGGCGGTGAAAAGGTGACGGCCCTGAAAGAGTGCAA
GGAGGCGCTGGCCGGGATGATCGACAAGACCAACTCGCACCCCATCATGA
TCCGCCTGGCGTGGCACGATGCCGGTGAGAGAGGGGAGGGAAGGAACGAG
ACTGGGGTCGCGACTAGCCCTGACTAGACAGACGAATTAATCCAAGAGCC
GTATTTTTCTTCCTACATACATGCGGGAAATCTATTGGATGACACAATAT
ATCACTCCCCCCCCCTGGCGGATTTTAAAAAGCTCGTTATGTGGAGGTCA
CCCTTATAAGGGATAAGGGATATAAACCTCCTTTTGTACAGTCCGTCGAA
GACGTTTGACCCTTTTCACATTTGGCGTCGCGAAGAGATGCTAGTTTTCG
GTGGACAAAGTCCCCGAGTTCGAATCTCACCATCATGACTTCTCTTTTTT
CAGGAATGTAAAAGTCAAAGAACTTTTCTCTCCATGAATAAAATAAAGAA
ACAATATGATGGGAGATCGGAACGAAAACGGTAATCGATATGCGGAACTC
CCGAGACGTGGCGGACGTAGCGCACCCTGTTGAACACGAAGAGAGTGCCA
GCACCAAACGACACATTTTCAGACAGCCCTCGATTAGATGTTTCCTATGC
CGCCCTTTTTCGGCACTTGCACTCTTCTTGCTGGGGGAAGAATCGAGCTT
TGCAAATCTGTCCAGGGGGGGGGTGATATCTCTGGTCATGTAAGGTAGGG
TCGTCTCGTCCGCTGCTGCTATATTATGTACCAATCAATGTATGTTTATT
ATGCAATGTTGCTGCATGGTTCGTTTTTGGCGCCACGCTCTCCCGCCTTG
CCAGGAACCTACAACAAGGACAGCACCGAGGGTTGGCCAAGGTCAGTGAG
GGTTCTTGCAGTGACTTTCTTTCAATTGGGAGACCGCGTCGATGTTTGTC
AGGCAATTTTATGCCACACGTAGGTTAGTTAAGGACCTTTTGTATATGCT
GCACATGGCCCAAAAACACGTTCACGTTCTTCTCTCCGCCCGCGCACTCT
TCGGGTTGATATTTTGAGTGACTTTTTCGCCTGCACTTTTTTTTACCCCC
GCACAGCAGACACCCCGTCTGCTCTTCCTCCTGCCCCATTCCCTCCGCAG
CTGTGTAGCCTTACCCATGAAACCTAAAGTGTCCCCCTCTCCCCCCCATC
CCCGGCTTCCACCCACCCATCCGTTCCCCGCAGACAAGACAAATGCATAT
ACCTTACCCTCACTCCGTCGGCCCCCCTCCCCGCCGTTTTCTTGGTTTTC
TTTCCGATTTTGTTTTTTTTTCGAGACAGGCAGGGCGGCGCAAACGGATC
CATCCGCTTCGAGCCCGAGATCAACCACGGCGCGAACGCCGGCCTGACCA
CGGCCCTGCAGCTGCTCAAGCCGATCAAGAAGAAGTACGAGGAGGTCGGG
TGGGCCGACCTCATGCAGCTCGCGTCGGCGACGGCGGTTGAGGTGGCCGG
TGAGAATAACGACGGAGTTAAAATTACAAAATTACGTACGTACGTACGTC
AAAACAGATATCATAGGTACATGATGAGCACCTATACTTAGGAGAGGGGG
TCCCCGAAAACCTAGAACTCTGTTACGTGTCCCAGCAAAGCCACAAAATA
ACATCACGCGTTTGATAGATCTGCCACATGGGTACATGATGTACCAGCAT
TTTACATTTAACGGAAACAGTTTCTATCGGTGCGACCTCGATACTGCTGT
GTGGCCCCGTGTTTGACCCTGATCCAGGCGCACGTCCCTCACGCCACGTG
CACCACTGGACCCATTTTTTCATCATGTACAGGATCTACGCGCTCTCCCT
TTATGGTATTTGTCTTGTCTATTGTAGCATAGTACTAACTGAGACTTTTT
TTGTCTCCCGCCCCCCTGTTTTCGGCTTTTTGTCCCGCCCGCAACCCTAC
CTGCCAGGGGGCCCCGTGATTGAGATGAAGTACGGCCGCAAGGATGCCGT
CAAGCCGGAGGACTGCGTGGACGAGGGGAACCTCCCCGCGGGAAACAAGC
CTTTCCCGGACGCGGACAACGCACAGGTCAGTTTTGTTTTCCCCCTGGCT
GTTTTCCTTGTTTCCTGTTTTCCGTCATTCTGTGTCGGTCGGCTGTTTTT
CCTCGCTGTTTTTTCTGTTTTCTTCGGCTGGCTGCTTCCTCACATACATG
CATATATATTCTGTTCCTATGATGATATTCGAAGTTATATTATGGCAGGA
ATTAAAAGGGAGTGAGAGACTGAACGATGCTCTCCTATTCCTTGACTCTT
TATTGCATGAGGGAGATGGGAACCGTTCCGTTTTCCTCATCTCCGCTTTT
TTATAATATTATAGGAGTATATGTTGTACATGGTTTCTTTCGAGTTTTAT
AGACAGGGAATGATCGCCCGGCGAAACAGCTCAGCAACAAGCACCGAAGA
TTGTTCGATGTTCGATTGTCGATACCGCGCTGAGAGAGACTCTCAGCCAA
CAGCTCGCCAGTAGGGTGGTGCTCCTCTCCCCCCCCCAGTCCTCTAACCC
TTTGCCCGTCCCTCTGATGCCCCCCTGGCAAGAAAACTACCAGGTAGATC
ATTATGAAGTCTCGTACTTCTGTGCCGAGGCGTATGTGCCCGCACAAACC
GGTGCCGGTAAAGGTATTGATACCGGTACAAAGCGTCACGGTATCCCACT
GCCGCATATGCGTCTTTTTTTATATTTGCATGTCGTGTTTTATATTTTAC
GCGCCATATATTTATATTTAAATGTAAAGCTGTGTGGAGGGTGATCGCGT
CTTCTTTGCGTCGCTCCGTTTGAGACGGTGGTTTATATTGCCGTGTGGAT
GGGGATCACGTCCTCTTTTTGATCGCTCCAGTTGAGGCGGTGGTGATTGT
GGTGTTGCTGGCTTTGTTTGTCGCTGCTTCGTCATCGCCACTTGGGTGCC
TAACGTCAACCAAACTCGTGATGATCGATATATATGTATATAATATATAT
GTATATGTATAAGGGGGTTCCGCAGAGGGACACCAATATCGACACACATA
TCCCTTCACTTCAAACATAAAAATACTTGAATGATAGCTCTTGTCCACTG
AAAACTAGACGACGTGGTTCCCGTTCTCGAGCCACATGGGGGCTCGATGT
ATCCTGGTTGGGCGCGTACACACAGGCGACATATTTTCTGTGTTTTTTTT
CAGCGGCGTCGAGTGTGCCTGGTTCTGTGACCACGAGCCGCCATGGATGT
TTCTGAATTTCAGCGGCCAATGTTAAGAGACACACAGCAGCAAAACTTGA
GTCTCTATCGAACTAACTACTTGCTTTTGTATCAACTCCCCAAAAGGGTT
AGATAGACTTTCAACCGAAATGAAAAAATCGTGCACGGAGTATGCTGCGC
GCGAAGTCCCCATTGACCGCATGGATGGATGTGCGCAAAATAATTCAAAC
TTTTTTATCCTCGTGCGCTGTTTGTTGCGGGGCTTTTTTTGCTCCAGGAC
CACCTGCGCAACGTGTTCTACCGCATGGGTTTCGGGGACGAGGGGATCGT
TGCTCTCTCGGGGGCTCACACGCTGGGGCGTGCCTTCAAGGTTAGTTGGT
GGATGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5694:199..6356-

>mRNA_L-elsbetiae_contig5694.14066.1 ID=mRNA_L-elsbetiae_contig5694.14066.1|Name=mRNA_L-elsbetiae_contig5694.14066.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1530bp|location=Sequence derived from alignment at L-elsbetiae_contig5694:199..6356- (Laminarionema elsbetiae ELsaHSoW15)
ATGCAAGGGCTCTCCAAGCCTTCGCCTCTCAAGCGTCATAAATCATCTTC
CCCGGAAAACCCTCCTGCTAAGAAGAGGCCTGCGGAAATCACAGCTGGGC
CCGGCAACTCCGACTCGCCGCACTGCCCCCGAGGGCAGGGTGCTACGGCC
CAAAGCTATACGCGAGACAGATTGATGCAAGGGCTCTCCAAGCCTTCGCC
TCTCAAGCGTCATAAATCATCTTCCCCGGAAAACCCTCCTGCTAAGAAGA
GGCCTGCGGAAATCACAGCTGGGCCCGGCAACTCCGACTCGCCGCACTGC
CCCCGAGGGCAGGGTGCTACGGCCCAAAGCTATACGCGAGACAGATTGGT
GACGGCCCTGAAAGAGTGCAAGGAGGCGCTGGCCGGGATGATCGACAAGA
CCAACTCGCACCCCATCATGATCCGCCTGGCGTGGCACGATGCCGGTGAC
GGCCCTGAAAGAGTGCAAGGAGGCGCTGGCCGGGATGATCGACAAGACCA
ACTCGCACCCCATCATGATCCGCCTGGCGTGGCACGATGCCGGAACCTAC
AACAAGGACAGCACCGAGGGTTGGCCAAGGTCAGAACCTACAACAAGGAC
AGCACCGAGGGTTGGCCAAGGTCAGGCGGCGCAAACGGATCCATCCGCTT
CGAGCCCGAGATCAACCACGGCGCGAACGCCGGCCTGACCACGGCCCTGC
AGCTGCTCAAGCCGATCAAGAAGAAGTACGAGGAGGTCGGGTGGGCCGAC
CTCATGCAGCTCGCGTCGGCGACGGCGGTTGAGGTGGCCGGGCGGCGCAA
ACGGATCCATCCGCTTCGAGCCCGAGATCAACCACGGCGCGAACGCCGGC
CTGACCACGGCCCTGCAGCTGCTCAAGCCGATCAAGAAGAAGTACGAGGA
GGTCGGGTGGGCCGACCTCATGCAGCTCGCGTCGGCGACGGCGGTTGAGG
TGGCCGGGGGCCCCGTGATTGAGATGAAGTACGGCCGCAAGGATGCCGTC
AAGCCGGAGGACTGCGTGGACGAGGGGAACCTCCCCGCGGGAAACAAGCC
TTTCCCGGACGCGGACAACGCACAGGTCAGTTTTGTTTTCCCCCTGGCTG
TTTTCCTTGTTTCCTGTTTTCCGTCATTCTGTGGGGCCCCGTGATTGAGA
TGAAGTACGGCCGCAAGGATGCCGTCAAGCCGGAGGACTGCGTGGACGAG
GGGAACCTCCCCGCGGGAAACAAGCCTTTCCCGGACGCGGACAACGCACA
GGTCAGTTTTGTTTTCCCCCTGGCTGTTTTCCTTGTTTCCTGTTTTCCGT
CATTCTGTGACCACCTGCGCAACGTGTTCTACCGCATGGGTTTCGGGGAC
GAGGGGATCGTTGCTCTCTCGGGGGCTCACACGCTGGGGCGTGCCTTCAA
GGTTAGTTGGTGGATGTAAGACCACCTGCGCAACGTGTTCTACCGCATGG
GTTTCGGGGACGAGGGGATCGTTGCTCTCTCGGGGGCTCACACGCTGGGG
CGTGCCTTCAAGGTTAGTTGGTGGATGTAA
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