mRNA_L-elsbetiae_contig5688.14054.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5688.14054.1 vs. uniprot
Match: A0A6H5J997_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J997_9PHAE) HSP 1 Score: 236 bits (603), Expect = 5.400e-66 Identity = 120/138 (86.96%), Postives = 129/138 (93.48%), Query Frame = 1 Query: 571 ADGEAVQN-AYNDIGLVVTRTKELEKIMRDLFQATGNGLNELLTSLKTERRIDPRTQQRIRSIATMRNKLVHSVDANNLTISNTFGASARKAFKAMCDDLEVSLRDCATKVVEEPFEQASRPANNFRLGNHPAFRGAG 981 ADG+ VQN AYNDIGLVVTRTKELEKIMRD F ATGNGLNELL+SL+T+RRIDPRTQQRIRSIA MRNKLVHSVDANNLT+SNTFGASARKAFK MCDDLE+SLR+CA KVVEEPFEQA+RPA+ FRLGNHPAFRG G Sbjct: 537 ADGDVVQNNAYNDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARKAFKMMCDDLELSLRECAAKVVEEPFEQAARPADAFRLGNHPAFRGIG 674
BLAST of mRNA_L-elsbetiae_contig5688.14054.1 vs. uniprot
Match: D7FRG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG9_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.970e-43 Identity = 82/91 (90.11%), Postives = 87/91 (95.60%), Query Frame = 1 Query: 571 ADGEAVQN-AYNDIGLVVTRTKELEKIMRDLFQATGNGLNELLTSLKTERRIDPRTQQRIRSIATMRNKLVHSVDANNLTISNTFGASARK 840 ADG+AVQN AYNDIGLVVTRTKELEKIMRD F ATGNGLNELL+SL+T+RRIDPRTQQRIRSIA MRNKLVHSVDANNLT+SNTFGASARK Sbjct: 44 ADGDAVQNNAYNDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARK 134
BLAST of mRNA_L-elsbetiae_contig5688.14054.1 vs. uniprot
Match: D7FRG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG8_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 3.110e-14 Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 1 Query: 853 MCDDLEVSLRDCATKVVEEPFEQASRPANNFRLGNHPAFRGAG 981 MCDDLE+ LR+CA KVVEEPFEQA+RPA+ FRLGNHPAFRG G Sbjct: 1 MCDDLELGLRECAAKVVEEPFEQAARPADAFRLGNHPAFRGIG 43
BLAST of mRNA_L-elsbetiae_contig5688.14054.1 vs. uniprot
Match: A0A2N8ZHG5_9VIBR (Uncharacterized protein n=1 Tax=Vibrio tapetis subsp. tapetis TaxID=1671868 RepID=A0A2N8ZHG5_9VIBR) HSP 1 Score: 63.9 bits (154), Expect = 5.330e-9 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 601 NDIGLVVTRTKELEKIMRDLFQATGNGLNELLTSLKTERRIDPRTQQRIRSIATMRNKLVHSVDANNLTISNTFGASARKAFKAMCDDLEVSL 879 +DI VVTRT+++EK++R + A+G GL++L+TS TE R+ +++R +AT+RNK+VH D F RK F +CD+ E L Sbjct: 2 SDIEKVVTRTRQIEKLLRVQYHASGKGLHQLITS--TEERLPHDVIKKLRYVATIRNKIVHEED---------FVLENRKEFLKVCDECEKEL 83
BLAST of mRNA_L-elsbetiae_contig5688.14054.1 vs. uniprot
Match: A0A4V0I0M2_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A4V0I0M2_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 3.030e-8 Identity = 39/100 (39.00%), Postives = 54/100 (54.00%), Query Frame = 1 Query: 601 NDIGLVVTRTKELEKIMRDLFQATGNGLNELLTSLKTERRIDPRTQQRIRSIATMRNKLVHSVDANNLTISNTFGASARKAFKAMCDDLEVSLRDCATKV 900 +DI L VTRTK LE ++ ATG GL+E ++S++ R+ P +R+R +AT+RNK+VH SN R F CD+ E LR T V Sbjct: 2 SDIELAVTRTKALESLLEQALGATGKGLHEKVSSVQD--RLAPALVKRMRFVATVRNKIVHE--------SNYQQIDDRTGFIRACDEAEAELRSLLTPV 91
BLAST of mRNA_L-elsbetiae_contig5688.14054.1 vs. uniprot
Match: A0A0F4NEV0_9VIBR (Uncharacterized protein n=1 Tax=Vibrio galatheae TaxID=579748 RepID=A0A0F4NEV0_9VIBR) HSP 1 Score: 60.1 bits (144), Expect = 1.220e-7 Identity = 34/101 (33.66%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 601 NDIGLVVTRTKELEKIMRDLFQATGNGLNELLTSLKTERRIDPRTQQRIRSIATMRNKLVHSVDANNLTISNTFGASARKAFKAMCDDLEVSLRDCATKVV 903 +DI VVTRT+++E+++R + A G G+++L+TS E R+ ++R IAT+RNK+VH D F +R+ F ++CD+ E L +++ + Sbjct: 2 SDIEKVVTRTRKIERLLRTQYHANGKGMHQLITSC--EERLPHDVIDKLRYIATIRNKVVHEDD---------FKLDSRRDFLSVCDECEKELTPRSSRFI 91
BLAST of mRNA_L-elsbetiae_contig5688.14054.1 vs. uniprot
Match: A0A142X7P1_9BACT (Uncharacterized protein n=3 Tax=Gemmata TaxID=113 RepID=A0A142X7P1_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 1.450e-7 Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 601 NDIGLVVTRTKELEKIMRDLFQATGNGLNELLTSLKTERRIDPRTQQRIRSIATMRNKLVHSVDANNLTISNTFGASARKAFKAMCDDLEVSLRDCA 891 +DI L +TRTK LE ++ F ATG GL++ +TS++ R+ ++IR +AT+RNK+VH D ++ R + CD+ E LR A Sbjct: 2 SDIELAITRTKALEALLEQAFNATGKGLHDKVTSVQN--RLPQPLVRKIRFVATVRNKIVHESDYKHI--------DDRDGYIRACDEAEAELRALA 88
BLAST of mRNA_L-elsbetiae_contig5688.14054.1 vs. uniprot
Match: A0A7Y4AKQ5_9VIBR (DUF4145 domain-containing protein n=2 Tax=Vibrio TaxID=662 RepID=A0A7Y4AKQ5_9VIBR) HSP 1 Score: 53.5 bits (127), Expect = 2.600e-5 Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 1 Query: 604 DIGLVVTRTKELEKIMRDLFQATGNGLNELLTSLKTERRIDPRTQQRIRSIATMRNKLVHSVDANNLTISNTFGASARKAFKAMCDDLEVSLRDCATKVV 903 DI VVTRT+ +EK++R + A G GL+EL+TS E R+ ++R IAT RNK+V D + L + F MCDD E L +++ + Sbjct: 3 DIEQVVTRTRNIEKLLRLQYHAEGEGLHELITSC--EERLPHDVVSKLRYIATCRNKVVKD-DKSEL--------EDQAKFTLMCDDCEKELTPRSSRFI 91 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5688.14054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5688.14054.1 >prot_L-elsbetiae_contig5688.14054.1 ID=prot_L-elsbetiae_contig5688.14054.1|Name=mRNA_L-elsbetiae_contig5688.14054.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=365bp MQQQQQQPPPVFGNHGGYQQQMPVFYGPSTPMQHGPRPPLPHGLVLGGGGback to top mRNA from alignment at L-elsbetiae_contig5688:768..5259- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5688.14054.1 ID=mRNA_L-elsbetiae_contig5688.14054.1|Name=mRNA_L-elsbetiae_contig5688.14054.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4492bp|location=Sequence derived from alignment at L-elsbetiae_contig5688:768..5259- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5688:768..5259- >mRNA_L-elsbetiae_contig5688.14054.1 ID=mRNA_L-elsbetiae_contig5688.14054.1|Name=mRNA_L-elsbetiae_contig5688.14054.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2190bp|location=Sequence derived from alignment at L-elsbetiae_contig5688:768..5259- (Laminarionema elsbetiae ELsaHSoW15)back to top |