mRNA_L-elsbetiae_contig5681.14049.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5681.14049.1
Unique NamemRNA_L-elsbetiae_contig5681.14049.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5681.14049.1 vs. uniprot
Match: D8LRI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI1_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 3.330e-77
Identity = 210/480 (43.75%), Postives = 253/480 (52.71%), Query Frame = 2 
Query:  515 SRALSIDDSFH-DQQQQHGQWVTGRIDGSS---SGRKLVRSSSVSSANTGSSWATGRSSSSXXXXXGKLVRSNSVSSKPARAAGTLPPSTSPASKEKGKGKLGLRSVMEFLSR-RSKKAGRPGSFTMTEPASPVSSLSRTNSDSSARS-VGLENGSGRIRA-----GEPGSTARPRVSFDAVVQTVYIEQMKEEEVRGTFYCRREYAAFKKAYRTHRDTSTDWCRGNDVLPCNCDSCKDDLVEGGRHGQPMYS----------SSAPAPVVVPSNNDNYDSAFDSPPPPPCPLA-PGQADKGECGQTRGHQEHADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVDSVFKDTQEDSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYRQRGTWGVGSVPIAASPVGRAYKRGGSLDGWGATSGVQEAVKCHGEGYAYKTLRRQGFSDLYIRTHFLPE 1888
            S +L+IDDSFH +++Q+   + T   DG     S RKL+ SSS  S     S                LVRS S+    A   G    + S +S    KGK  LRSV+ FLSR +S K  +P SFTMT PASP SSLSRTNS+SSA +  G ++      A     G   +T+RPRVSF   V TV+IEQMKEEEVR TFYCR EYAAFK+AYR HRD + DWCRGNDVLPCNCD+C+DDLVEGG H   +YS          SS+ A   +   +  YD A   PPPPP P A  G++      Q   H E                                   PV +VF+D+ E    XXXXXXXXX                                     ++ +  TWGVGS+ +A  P  R++ RGGSLD WG TS V+EAVKCHGEGYAYKTLR QGFSDLYI+THFLP 
Sbjct:    8 SASLTIDDSFHFEREQRRWSYRTKESDGGDDIGSRRKLMHSSSTRSTRXXXSR--------------NLVRSKSI----AGGEGCRAHAPSASSSSPSKGKQMLRSVVGFLSRAKSAKPRKPRSFTMTVPASPASSLSRTNSESSASAHEGCQDDDSGSSARGSAHGHGAATSRPRVSFVTDVTTVFIEQMKEEEVRNTFYCRTEYAAFKEAYRRHRDNNPDWCRGNDVLPCNCDACRDDLVEGGPH---IYSAAVSSAGGGASSSQADAHMGKEDGPYDHA---PPPPPNPYAHDGRSGGDGSEQPECHHE--------------------------------PPSPVGAVFQDSPEKEXXXXXXXXXXXFEYAAETRPTQRPCPAPEGRNRRLH------------SHTRSRTWGVGSISLAVPPATRSHNRGGSLDDWGVTSSVREAVKCHGEGYAYKTLRLQGFSDLYIKTHFLPS 419
[Close]
BLAST of mRNA_L-elsbetiae_contig5681.14049.1 vs. uniprot
Match: A0A6H5KM15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM15_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 1.130e-68
Identity = 198/484 (40.91%), Postives = 245/484 (50.62%), Query Frame = 2 
Query:  509 KSSRALSIDDSFH-DQQQQHGQWVTGRIDGSS---SGRKLVRSSSVSSANTGSSWATGRSSSSXXXXXGKLVRSNSVSSKPARAAGTLPPSTSPASKEKGKGKLGLRSVMEFLSRRSKKAGR---PGSFTMTEPASPVSSLSRTN------SDSSARSVGLENGSGRIRAGEPGSTARPRVSFDAVVQTVYIEQMKEEEVRGTFYCRREYAAFKKAYRTHRDTSTDWCRGNDVLPCNCDSCKDDLVEGGRHGQPMYS----------SSAPAPVVVPSNNDNYDSAFDSPPPPPCPLAPGQADKGECG-QTRGHQEHADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVDSVFKDTQEDSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYRQRGTWGVGSVPIAASPVGRAYKRGGSLDGWGATSGVQEAVKCHGEGYAYKTLRRQGFSDLYIRTHFLPE 1888
            + S +L+IDDSF  +++Q+   + T   DG     S RKL+RSSS +  ++  S                LVRS S++       G  P S+S  SK    GK  LRSV+ FLSR      R   P SFT+T PASP SSLSRT+      +    +                 +++RPRVSF   V TV+IEQMKEEEVR TFYCR EYAAFK+AYR HRD+STDWCRGNDVLPCNC++C+DDLVEGG H   +YS          SS  A   V + +  YD A   PPPP  P A      G+   Q   H E                                   PV +VF+D+ E    XXXXXXXXX                                     ++ +  TWG+GS+P+A  P  R++  GGSLD WG +S V+EAVKCHGEGYAYKTLR QGFSDLYI+THFLP 
Sbjct:    6 RRSASLTIDDSFDLEREQRRWSYRTKDSDGGDDIGSRRKLLRSSSTTQISSTRSR--------------NLVRSKSIARGEGCRTGAPPVSSSSPSK----GKQMLRSVVGFLSRAKSAKPRNRKPRSFTVTVPASPASSLSRTSXXXXXXAHEGCQDXXXXXXXXXXXXXXXAASSRPRVSFVTDVTTVFIEQMKEEEVRNTFYCRTEYAAFKEAYRMHRDSSTDWCRGNDVLPCNCEACRDDLVEGGPH---IYSAAVSSAGGGASSPQADAHVGNEHGPYDHA---PPPPRNPYAHDDRSGGDGSEQLECHHE--------------------------------PPSPVGAVFQDSPEQXXXXXXXXXXXXFKYAAETRPIQRPCPTREGRNRRLP------------SHTRSRTWGMGSIPLAVPPATRSHNPGGSLDDWGVSSSVREAVKCHGEGYAYKTLRLQGFSDLYIKTHFLPS 421
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5681.14049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRI1_ECTSI3.330e-7743.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KM15_9PHAE1.130e-6840.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5681contigL-elsbetiae_contig5681:3414..8443 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-18_004610.1
Exons2
Model size4044
Cds size1413
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5681.14049.1prot_L-elsbetiae_contig5681.14049.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5681 3895..6293 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816605.9378421-UTR-L-elsbetiae_contig5681:3413..38941622816605.9378421-UTR-L-elsbetiae_contig5681:3413..3894Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5681 3414..3894 +
1691683680.0176911-UTR-L-elsbetiae_contig5681:3413..38941691683680.0176911-UTR-L-elsbetiae_contig5681:3413..3894Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5681 3414..3894 +
1622816605.9776928-UTR-L-elsbetiae_contig5681:6293..84431622816605.9776928-UTR-L-elsbetiae_contig5681:6293..8443Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5681 6294..8443 +
1691683680.0465887-UTR-L-elsbetiae_contig5681:6293..84431691683680.0465887-UTR-L-elsbetiae_contig5681:6293..8443Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5681 6294..8443 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816605.9515517-CDS-L-elsbetiae_contig5681:3894..44461622816605.9515517-CDS-L-elsbetiae_contig5681:3894..4446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5681 3895..4446 +
1691683680.0273497-CDS-L-elsbetiae_contig5681:3894..44461691683680.0273497-CDS-L-elsbetiae_contig5681:3894..4446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5681 3895..4446 +
1622816605.9668465-CDS-L-elsbetiae_contig5681:5432..62931622816605.9668465-CDS-L-elsbetiae_contig5681:5432..6293Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5681 5433..6293 +
1691683680.037079-CDS-L-elsbetiae_contig5681:5432..62931691683680.037079-CDS-L-elsbetiae_contig5681:5432..6293Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5681 5433..6293 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5681.14049.1

>prot_L-elsbetiae_contig5681.14049.1 ID=prot_L-elsbetiae_contig5681.14049.1|Name=mRNA_L-elsbetiae_contig5681.14049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=471bp
MASMFNWSKKSSRALSIDDSFHDQQQQHGQWVTGRIDGSSSGRKLVRSSS
VSSANTGSSWATGRSSSSSGGGGGKLVRSNSVSSKPARAAGTLPPSTSPA
SKEKGKGKLGLRSVMEFLSRRSKKAGRPGSFTMTEPASPVSSLSRTNSDS
SARSVGLENGSGRIRAGEPGSTARPRVSFDAVVQTVYIEQMKEEEVRGTF
YCRREYAAFKKAYRTHRDTSTDWCRGNDVLPCNCDSCKDDLVEGGRHGQP
MYSSSAPAPVVVPSNNDNYDSAFDSPPPPPCPLAPGQADKGECGQTRGHQ
EHADPPPPPSPFARVHKRAGKGREGEGQQGFDGPPSPVDSVFKDTQEDSI
GGGGGSSVSSCCSSSSGSSSGSSRRSRTTAPRKCSSSRHSSARRKAAAYR
QRGTWGVGSVPIAASPVGRAYKRGGSLDGWGATSGVQEAVKCHGEGYAYK
TLRRQGFSDLYIRTHFLPEG*
back to top

mRNA from alignment at L-elsbetiae_contig5681:3414..8443+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5681.14049.1 ID=mRNA_L-elsbetiae_contig5681.14049.1|Name=mRNA_L-elsbetiae_contig5681.14049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5030bp|location=Sequence derived from alignment at L-elsbetiae_contig5681:3414..8443+ (Laminarionema elsbetiae ELsaHSoW15)
TTCCCTTGGTGTGTTCGTAGTTTTTATATTTTTGCTACAGGGTACTCGCC
GTTGAAGCTTTCAACTTTCCTTTTTAAACTCTACAATATGTACGCTTTTT
TGCATCTCTGTACGTGGCGATTGGGTTGTTGTGGATACGTTCATGTTGTC
TTCGTAAGAACAACTGAAACATGTGGTGCGCGGCGGAGTATGATGTTAAA
TGAAGCACTTTGGGGGCGTGAATTTTGCGTCAGAAAAAAGTGGGGTCCGC
GCGTACCAAACATCTAGACCCATGAACATGCAAATGTGTGTGCGTAACCC
CAAGTATGGATATGCATCCGAAATAGGGAACAACTTGTGATGTACACCAG
CTGCCGATAATACCTGACTCGTCTGCTCTGCTTCTCTGTTCGTGCCATCA
GCGTCTCCTCTCGTTCAAGCCTTTCAAGACGTGCCTCCTGGGCTCACTAC
ACTACATCTTTGCTAAACAATCGCAAACAAGATGGCTAGCATGTTTAACT
GGAGTAAAAAAAGCAGCCGAGCGTTATCGATCGACGACTCCTTTCACGAT
CAGCAACAACAGCACGGACAATGGGTCACAGGCAGGATCGACGGGAGCAG
CAGCGGCCGAAAACTGGTGCGCAGCAGCAGCGTGTCCAGCGCCAACACGG
GTTCCTCATGGGCCACAGGCAGGAGCAGCAGCAGCAGCGGCGGCGGCGGC
GGAAAGCTGGTGCGCAGCAACAGCGTCTCCAGTAAACCCGCGCGTGCCGC
GGGCACGCTGCCCCCCTCGACCTCGCCCGCGTCGAAAGAGAAAGGGAAAG
GGAAGCTGGGGCTGCGGTCGGTGATGGAGTTTCTCTCGAGGAGGAGCAAG
AAAGCCGGTAGGCCAGGCAGTTTCACCATGACGGAGCCAGCCTCGCCCGT
GTCGTCGCTGTCGAGGACCAACAGCGACTCTTCCGCGCGCAGTGTTGGTC
TTGAGAACGGCAGCGGGCGAATACGAGCGGGAGAGCCCGGCAGCACGGCC
AGGCCGCGGGTGTCATTCGACGCGGTCGTGCAGGTGTGTGCTTGTGTGTG
TGAGAATTTGACTGTCTGTGGTGTTTTCATGTTTTCAGCCCGGTGTCGAC
TGGTTTTAGGTGTGTCATAGTTTTCTTGATTTTGCTTTGCAAATACGCTA
AACACACACTTACGCAGAAGTCGTGCTAAGTTTTAGTGGCATCTTGCTGA
TCTGGATACAATGTATGATGCTCAAATGATGTACATCTACAGATGTACGA
CAGCTGCATGCCGCCTGTTTCCTTGGAAGCACCTTGGGTGTGCCCAAAAT
GACAAAAATACATACTGTTGCGCATCCCCAGATGTGCACAAGATGGCTCC
TCGCACCTCGCTTATCGGCAGGGCATTATTTGTCTCAGGTTTCCCAAATC
ACCTCTGAATTTTTATGTTCTTGTTTTCCATAGTTGATGCATGCCATGAC
GAGGGCTTCAACTTGAAATGCAACCAGGTTGTGGTCACCAGATAGACGCC
CACGAACTAATGAAGACCCAGCCAGCTCTGAATTTTTATGTTCCTGTTTT
CCATAGTTGATGCGTGCGATGACGATGGCTTCAACTTGAAATGCAACTAG
GTTGTGGTCACCAGATAGATGCCCACGAACAAATGAAGACCCAGCCAGCT
CGAGGCACACGCCACGAAACAGAAATACGCAAGCACAAAGCTTGTAAGAC
ACAAACTCCCCCATAATTTCAACAGTACGCCCTTCAAATCATCGGCTGAT
GCCGCCCGTTGTTGTGTTACAGCTATTGTCGCGGTGTGCTTCCATTCGGA
CTGTTTGCATTGTTGTGCAAAATGAGAGTTCCAATTTTGCAACAGCAACC
ATCAAACACCCACCCGATAGAAAATTGATTTGTGCCGCTGATATTTCAGT
GTTGTATTTGAGCTTGAGCGCCATCGCTGTCTTTCGTTTCGTGGTGTTGG
ACGCTAAGCTCAAATCCCTTTTCTTCTTGGCCCTCCCGTTTTTGCCACCC
CCCCCCCTTCGCGTCGCAGACCGTTTACATCGAGCAAATGAAGGAGGAGG
AAGTGCGCGGCACTTTCTACTGCCGCAGGGAGTACGCGGCTTTCAAGAAG
GCCTACCGCACGCACCGCGACACGAGCACGGACTGGTGCAGGGGCAACGA
CGTACTGCCGTGCAACTGCGACTCCTGCAAAGACGACCTCGTGGAGGGAG
GCCGGCATGGCCAGCCCATGTACTCCTCATCGGCGCCGGCGCCGGTGGTG
GTCCCCTCCAACAACGACAACTACGACAGTGCCTTCGACTCCCCTCCGCC
GCCGCCCTGCCCCCTCGCTCCCGGGCAAGCAGATAAGGGCGAATGTGGGC
AGACGAGGGGGCACCAGGAGCATGCCGACCCGCCACCGCCGCCCAGCCCC
TTTGCCCGCGTACACAAGAGAGCGGGCAAGGGAAGAGAGGGAGAGGGGCA
ACAGGGTTTCGACGGGCCTCCGTCTCCCGTGGACTCTGTGTTCAAAGACA
CCCAAGAAGACAGCATCGGCGGCGGCGGCGGCAGCAGCGTCAGCAGCTGC
TGCAGCAGCAGTAGCGGCAGTAGCAGCGGCAGCAGCCGCCGTTCCCGCAC
GACAGCCCCCCGGAAGTGTTCGTCGTCGAGGCACTCCAGCGCTAGGCGTA
AAGCTGCTGCGTACAGGCAGCGCGGAACTTGGGGGGTGGGCAGCGTGCCC
ATAGCCGCGTCTCCGGTAGGCAGGGCGTACAAGCGAGGCGGGAGCCTGGA
TGGATGGGGAGCGACCTCAGGCGTCCAGGAGGCAGTCAAGTGCCATGGGG
AAGGGTACGCATACAAGACACTTCGTCGCCAGGGCTTCTCCGACCTCTAC
ATCCGGACGCATTTCTTGCCCGAGGGCTAAATAAGTTGTTGCGTGGTTGG
TTTGTTGAGAGTGGGGAGTTATAGCATGGGAGGTGGGGCGAGGGGCGGTA
TGCGTTTGTCCCATGGCCATTCACGCCGTTGTTTTGCGACTCTTTTTTTT
CCGGGTACTCTATGGTGGTGAACTACACGGAGCAGCAGGGTAGGTTTGGT
TCGTGGTCAATCGCCCTCGGCGCAGCCCCGTGTCATGTCATGTAGTGTCA
TCCGTGGCTTGGCGCGGGTTGGGGAAGGCAGTTGTGCGTTGGGTGGGGTC
GCCATGCTTGCTCTGTGTTAGGTACTTCCTGTAAATAAAACTCGTTGTGG
TGTGTTTGGGGTTGTGCGACCGAGGAGACATCTCGGCTGCAGTCAGGTAA
AGATCCGAGCGCTTGTTTTGTACTGTGTCAAGACGCGACGGAATCGGGTG
TTGGAGTGTTTGTTGGGGTTTTGTCTTGTGTGCTGCTAACTGTTGGATGA
TAGACCGTGTTCTTACGTGTTTTTATATGGAAAACACCTTTTGCTGAAAG
AGGGGTTCCAAAAACCCTTCCCAGGCCACGGACCGTCCTCAAACACCTGC
ACACCAATGTGCCCATGGACTCGGTGGGTAGGGATCGCGTATTATACTGT
TTTTTAATGAATATTAGAAGCCTGGGTTGCCTGTTGGCGCTCACGGTTAA
AAGGGGTTCCCAGACGTTCTGTTTTCGATTGATGTTAATTTCCCGTGTGA
GCAGCCTTCGAACGTTTTAGTGCATGCAAGTCATTCAGTCACCTCAATTC
TTTTTTCAGATCTGTATATGGCGCGGCGCTGGCGCGCCACCAAGAGGGAG
CGGTATTCAGGTGTATGAAATTGATTGGGGATTCACCAGCAGTGAGAGGT
AGTAGCACATGGAGTCTGGTGGCGGCTGGTTGGAGAGGGTTTGAGCTTTG
GTAAACTTGGTGTAGAATTGACGTGCGATACAGGCAATAGGCGGGCGTAG
TTGTGATGTGCGTGCAAGATGAGAGGGGAGGGTGGTTGGTTTCCGTTGCG
GCGGATAGAAGCTTGGGGTTCGAGAGACGAAGGCAGCGGTGTTCGTGCTT
CCCTGTCTGTTTTGTGTGGTCGTTTTTTTTTTCTTTTCCGTGGGTCAATT
TCCTTGTCCGCACGTCCAGCTCCAATCTGGCCCAAGTGCCAGGGGGATAG
ATGCCTGTTTAACGGCGTGTGCCGGTTTTTCCTGTTGCACAAAAATTGCC
CCCCTCCCTTTTTCTTACGGTAGCGTACACGCACGGCGCGCACCCCCTGC
TGAACATCTGTAGGGAGAACGATAGTTCTGGCTCGGGCGATACAGCAGCA
GCACACTTAGAACAGTCTGGTTCGGAGATTCCCGTAGATCTACGCGATAG
AGCGAAATTCACCGGAATAAACCACGGTTTATCATCTGTTTGGTAGAGCT
TTGAAAGTTTCTTGGGTGTTGTGGAAACGTGCGCAGGGGGCCGGCTGGGG
CCCGTCACCGGACGCAAAGACCAGTAGATGTTTTAGGTCTAGATGCCTAG
GTCGTGGACCGTGGATGTGTTTTCGCTGCCACGGCGGTACACTGCGTGTG
ATAGAGTTGAAAGCAAACGCACAGTTTGTGGTAGATGTGTGTGTGTGCGA
GTTTCTAGACCATCCCAGTCAGTGTATTTTGTTTTGGGTCACAGCAACAA
AATGATAAAGGGCAGGTTTTCGGGTTCCCCTCCTCGATGGTGAGCGATGA
AGAGATGGTATCGTCTTCCCCGGCGGTTGCCTCCGGCTGCGGCTTTAGTC
GAGGTGTTTTTTCTCTGTTCTTCACGGAACGATTCGATAGCATCAGGGCA
ATTGCATGGTATTCTAAAAGTGTCATCCGGAAGGAGGATAGTACGCCTAG
GTTTTACTGCCCGAGGCACAAATAGTTGTATACGTAGTATGTGTGGATCG
ATGGCGTAGCTGGTAGCTAGTGGTTGAGGAGCGAGTGTGGGGATGGTGTG
TTATTTTTGTGGACCGGTATGTGTGTGGCGAAGGTATTTTCAAGAGGTTG
AAGATGTTGTGCATCATGTACCCTGCGTGTAGTTGATGTCCAGCTTCGAT
TCTTATTTTTTGCTGCGTTCTAAAAGCAGTCACAATCACAACGTAGCAGT
TTTCGGGAGGAGTGGCGAGTGGGTTGCCGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5681:3414..8443+

>mRNA_L-elsbetiae_contig5681.14049.1 ID=mRNA_L-elsbetiae_contig5681.14049.1|Name=mRNA_L-elsbetiae_contig5681.14049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2826bp|location=Sequence derived from alignment at L-elsbetiae_contig5681:3414..8443+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTAGCATGTTTAACTGGAGTAAAAAAAGCAGCCGAGCGTTATCGAT
CGACGACTCCTTTCACGATCAGCAACAACAGCACGGACAATGGGTCACAG
GCAGGATCGACGGGAGCAGCAGCGGCCGAAAACTGGTGCGCAGCAGCAGC
GTGTCCAGCGCCAACACGGGTTCCTCATGGGCCACAGGCAGGAGCAGCAG
CAGCAGCGGCGGCGGCGGCGGAAAGCTGGTGCGCAGCAACAGCGTCTCCA
GTAAACCCGCGCGTGCCGCGGGCACGCTGCCCCCCTCGACCTCGCCCGCG
TCGAAAGAGAAAGGGAAAGGGAAGCTGGGGCTGCGGTCGGTGATGGAGTT
TCTCTCGAGGAGGAGCAAGAAAGCCGGTAGGCCAGGCAGTTTCACCATGA
CGGAGCCAGCCTCGCCCGTGTCGTCGCTGTCGAGGACCAACAGCGACTCT
TCCGCGCGCAGTGTTGGTCTTGAGAACGGCAGCGGGCGAATACGAGCGGG
AGAGCCCGGCAGCACGGCCAGGCCGCGGGTGTCATTCGACGCGGTCGTGC
AGATGGCTAGCATGTTTAACTGGAGTAAAAAAAGCAGCCGAGCGTTATCG
ATCGACGACTCCTTTCACGATCAGCAACAACAGCACGGACAATGGGTCAC
AGGCAGGATCGACGGGAGCAGCAGCGGCCGAAAACTGGTGCGCAGCAGCA
GCGTGTCCAGCGCCAACACGGGTTCCTCATGGGCCACAGGCAGGAGCAGC
AGCAGCAGCGGCGGCGGCGGCGGAAAGCTGGTGCGCAGCAACAGCGTCTC
CAGTAAACCCGCGCGTGCCGCGGGCACGCTGCCCCCCTCGACCTCGCCCG
CGTCGAAAGAGAAAGGGAAAGGGAAGCTGGGGCTGCGGTCGGTGATGGAG
TTTCTCTCGAGGAGGAGCAAGAAAGCCGGTAGGCCAGGCAGTTTCACCAT
GACGGAGCCAGCCTCGCCCGTGTCGTCGCTGTCGAGGACCAACAGCGACT
CTTCCGCGCGCAGTGTTGGTCTTGAGAACGGCAGCGGGCGAATACGAGCG
GGAGAGCCCGGCAGCACGGCCAGGCCGCGGGTGTCATTCGACGCGGTCGT
GCAGACCGTTTACATCGAGCAAATGAAGGAGGAGGAAGTGCGCGGCACTT
TCTACTGCCGCAGGGAGTACGCGGCTTTCAAGAAGGCCTACCGCACGCAC
CGCGACACGAGCACGGACTGGTGCAGGGGCAACGACGTACTGCCGTGCAA
CTGCGACTCCTGCAAAGACGACCTCGTGGAGGGAGGCCGGCATGGCCAGC
CCATGTACTCCTCATCGGCGCCGGCGCCGGTGGTGGTCCCCTCCAACAAC
GACAACTACGACAGTGCCTTCGACTCCCCTCCGCCGCCGCCCTGCCCCCT
CGCTCCCGGGCAAGCAGATAAGGGCGAATGTGGGCAGACGAGGGGGCACC
AGGAGCATGCCGACCCGCCACCGCCGCCCAGCCCCTTTGCCCGCGTACAC
AAGAGAGCGGGCAAGGGAAGAGAGGGAGAGGGGCAACAGGGTTTCGACGG
GCCTCCGTCTCCCGTGGACTCTGTGTTCAAAGACACCCAAGAAGACAGCA
TCGGCGGCGGCGGCGGCAGCAGCGTCAGCAGCTGCTGCAGCAGCAGTAGC
GGCAGTAGCAGCGGCAGCAGCCGCCGTTCCCGCACGACAGCCCCCCGGAA
GTGTTCGTCGTCGAGGCACTCCAGCGCTAGGCGTAAAGCTGCTGCGTACA
GGCAGCGCGGAACTTGGGGGGTGGGCAGCGTGCCCATAGCCGCGTCTCCG
GTAGGCAGGGCGTACAAGCGAGGCGGGAGCCTGGATGGATGGGGAGCGAC
CTCAGGCGTCCAGGAGGCAGTCAAGTGCCATGGGGAAGGGTACGCATACA
AGACACTTCGTCGCCAGGGCTTCTCCGACCTCTACATCCGGACGCATTTC
TTGCCCGAGGGCTAAACCGTTTACATCGAGCAAATGAAGGAGGAGGAAGT
GCGCGGCACTTTCTACTGCCGCAGGGAGTACGCGGCTTTCAAGAAGGCCT
ACCGCACGCACCGCGACACGAGCACGGACTGGTGCAGGGGCAACGACGTA
CTGCCGTGCAACTGCGACTCCTGCAAAGACGACCTCGTGGAGGGAGGCCG
GCATGGCCAGCCCATGTACTCCTCATCGGCGCCGGCGCCGGTGGTGGTCC
CCTCCAACAACGACAACTACGACAGTGCCTTCGACTCCCCTCCGCCGCCG
CCCTGCCCCCTCGCTCCCGGGCAAGCAGATAAGGGCGAATGTGGGCAGAC
GAGGGGGCACCAGGAGCATGCCGACCCGCCACCGCCGCCCAGCCCCTTTG
CCCGCGTACACAAGAGAGCGGGCAAGGGAAGAGAGGGAGAGGGGCAACAG
GGTTTCGACGGGCCTCCGTCTCCCGTGGACTCTGTGTTCAAAGACACCCA
AGAAGACAGCATCGGCGGCGGCGGCGGCAGCAGCGTCAGCAGCTGCTGCA
GCAGCAGTAGCGGCAGTAGCAGCGGCAGCAGCCGCCGTTCCCGCACGACA
GCCCCCCGGAAGTGTTCGTCGTCGAGGCACTCCAGCGCTAGGCGTAAAGC
TGCTGCGTACAGGCAGCGCGGAACTTGGGGGGTGGGCAGCGTGCCCATAG
CCGCGTCTCCGGTAGGCAGGGCGTACAAGCGAGGCGGGAGCCTGGATGGA
TGGGGAGCGACCTCAGGCGTCCAGGAGGCAGTCAAGTGCCATGGGGAAGG
GTACGCATACAAGACACTTCGTCGCCAGGGCTTCTCCGACCTCTACATCC
GGACGCATTTCTTGCCCGAGGGCTAA
back to top