mRNA_L-elsbetiae_contig5673.14033.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Match: D8LNF7_ECTSI (Transmembrane protein 107 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF7_ECTSI) HSP 1 Score: 126 bits (316), Expect = 5.870e-35 Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 1 MRIEDRVIPARFLVTIGHLVGVALVFKTKSDNVYAGLSYDPTVAEVAAATSDINAALAIAMVCFGLDFVSLFFGLSIFMMK 243 M+IEDRVIPARFLVT+GHLVGV L+ KTKSDNVYAGLS DPT AEVA A +NAALA+AMVCFGLDF+SLFFGLSIFMMK Sbjct: 1 MKIEDRVIPARFLVTLGHLVGVILISKTKSDNVYAGLSSDPTAAEVATANGHVNAALALAMVCFGLDFMSLFFGLSIFMMK 81
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Match: A0A7S2UVK1_9STRA (Transmembrane protein 107 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVK1_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.300e-28 Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 1 MRIEDRVIPARFLVTIGHLVGVALVFKTKSDNVYAGLSYDPTVAEVAAATSDINAALAIAMVCFGLDFVSLFFGLSIFMMKVNALQTVAHFAGAILIANFISEEWDYRCLWRV 339 M +E R+IPARFL+T+GHL+ +V + VYAGLS D T E+AAAT+++ A+ +A++CF +D + L G +IF +VN Q +AHF G I ++ FI E WDYR LW + Sbjct: 1 MGLERRLIPARFLITLGHLIPTVMVMYVMEEQVYAGLSADATDKEIAAATAELEGAVLLAIICFLVDLLGLVAGFTIFSTRVNVFQIIAHFVGGIQVSTFIHEVWDYRVLWYI 113
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Match: A0A835ZGM2_9STRA (Transmembrane protein 107 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGM2_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.850e-27 Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 4 RIEDRVIPARFLVTIGHLVGVALVFKTKSDNVYAGLSY-DPTVAEVAAATSDINAALAIAMVCFGLDFVSLFFGLSIFMMKVNALQTVAHFAGAILIANFISEEWDYRCLWRV 339 RIE+ +IPARFL T+GH + V ++ +K+ V AGL+ P+ ++AAA S++N AL A+ CF LDF L FG S FM KVNALQ + HFAG +L + + EEWDYR W + Sbjct: 4 RIEEALIPARFLTTLGHFLAVLILAGSKATVVNAGLAGGQPSADDIAAANSEVNGALIFALFCFLLDFAGLGFGFSAFMPKVNALQILVHFAGGVLTSRLVVEEWDYRVFWYI 116
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Match: A0A7S3NE17_9STRA (Transmembrane protein 107 n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NE17_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.420e-22 Identity = 41/112 (36.61%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 4 RIEDRVIPARFLVTIGHLVGVALVFKTKSDNVYAGLSYDPTVAEVAAATSDINAALAIAMVCFGLDFVSLFFGLSIFMMKVNALQTVAHFAGAILIANFISEEWDYRCLWRV 339 R+ + +IPARF++T+GHLV + ++ TK +N++AGL DP+ + A + A ++++CF D +FFG SIF +K+N LQ + HF G ++++ I + W Y+ +W + Sbjct: 5 RVLEVLIPARFVLTVGHLVAMLMIAYTKRENLFAGLPVDPSNTRLDKAKKEFEIAYILSLICFAFDLFGIFFGTSIFFVKMNLLQIICHFTGGVMVSLMIEQAWQYQYIWLI 116
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Match: F0YLV6_AURAN (Transmembrane protein 107 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLV6_AURAN) HSP 1 Score: 91.7 bits (226), Expect = 1.810e-21 Identity = 43/106 (40.57%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 22 IPARFLVTIGHLVGVALVFKTKSDNVYAGLSYDPTVAEVAAATSDINAALAIAMVCFGLDFVSLFFGLSIFMMKVNALQTVAHFAGAILIANFISEEWDYRCLWRV 339 IPARF++T+GHLV + ++ TK +N+ AGL DP A A ++ AA + + CF D V + G S+F K N LQ + HFAG +L+++ I++ W Y+ +W V Sbjct: 2 IPARFMLTMGHLVSLLMIVYTKKENILAGLPRDPGKARYDEAKAEFEAAYVVCLACFVFDMVGILTGTSLFFPKANLLQIICHFAGGVLVSSMIAQSWQYQYIWLV 107
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Match: A0A8J2S4M7_9STRA (Transmembrane protein 107 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4M7_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.530e-17 Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 22 IPARFLVTIGHLVGVALVFKTKSDNVYAGLSYDPTVAEVAAATSDINAALAIAMVCFGLDFVSLFFGLSIFMMKVNALQTVAHFAGAILIANFISEEWDYRCLW 333 IPARFL+T+GHLV V + T+ +N+ + +S DP A+ + A AI +VCF +D + + G S+F K N LQ + HF G+ I + I++ W Y+ +W Sbjct: 10 IPARFLLTVGHLVSVLTMVHTRKENLSSAVSADPKDAQ-----KEFMMAYAICLVCFAVDVLGILMGTSLFFPKANLLQIICHFVGSCFITSMITQSWQYQYIW 108
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Match: A0A3P3Y2A6_PLABS (Transmembrane protein 107 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y2A6_PLABS) HSP 1 Score: 79.7 bits (195), Expect = 1.020e-16 Identity = 44/113 (38.94%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 1 MRIEDRVIPARFLVTIGHLVGVALVFKTKSDNVYAGLSYDPTVAEVAAATSDINAALAIAMVCFGLDFVSLFFGLSIFMMKVNALQTVAHFAGAILIANFISEEWDYRCLWRV 339 M IE ++P RFL+T HL+ + +F +K N+ A L T + ++ + + AAL IA+VCF ++++ +F G+SI N+ VAHF GAILIA+F E W+ +W V Sbjct: 1 MGIESTLLPTRFLLTTVHLMAILTLFNSKDANIRAALPISYTTVQYSSMNNQMLAALWIAVVCFIVEYLGMFSGVSIMKHAHNSFYVVAHFIGAILIASFALESWNMLAIWYV 113
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Match: A0A7S3HJZ1_9STRA (Transmembrane protein 107 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJZ1_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.870e-13 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 7 IEDRVIPARFLVTIGHLVGVALVFKTKSDNVYAGLSYDPTVAEVAAATSDINAALAIAMVCFGLDFVSLFFGLSIFMMKVNALQTVAHFAGAILIANFISEEWDYRCLWRV 339 ++ +I ARF+ T+GH + + L+F T +N+ L + E AT AAL I +CF DF LFFG S+F N + HF G IL++ ++ W+Y+ LW + Sbjct: 4 VQQYLISARFITTMGHFIALLLLFSTIDNNIDESLGDNYDSEEKQWATETSWAALIIGFLCFVCDFAGLFFGTSLFYNTGNMFHILVHFIGGILLSWVVTYSWNYKALWPI 114
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Match: A0A6H5JQF3_9PHAE (Transmembrane protein 107 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF3_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 1.390e-11 Identity = 26/33 (78.79%), Postives = 32/33 (96.97%), Query Frame = 1 Query: 241 KVNALQTVAHFAGAILIANFISEEWDYRCLWRV 339 +VNALQTVAHF+GA+LIA+FISE WDYRCLW++ Sbjct: 14 RVNALQTVAHFSGAVLIAHFISEAWDYRCLWQI 46
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Match: A0A1S8W9G7_9FUNG (Transmembrane protein 107 n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W9G7_9FUNG) HSP 1 Score: 67.4 bits (163), Expect = 7.540e-11 Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 1 MRIEDRVIPARFLVTIGHLVGVALVFKTKSDNVYAGLSYDPTVAEVAAATSDINAALAIAMVCFGLDFVSLFFGLSIFMMKVNALQTVAHFAGAILIANFISEEWDYRCLWRV 339 M I +IPARFLVTIGHL+ + F TK N+ + L T+ + A + AAL + + F ++F L G ++F + + VAH AG I ++ F++E W Y W + Sbjct: 1 MTILSSIIPARFLVTIGHLIATIMAFLTKDSNIMSALPISSTL-DYRAFEQSLVAALILTWILFVIEFSGLLSGRTMFCTASSTIHIVAHAAGMISLSLFMTEGWHYITYWYI 112 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5673.14033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5673.14033.1 >prot_L-elsbetiae_contig5673.14033.1 ID=prot_L-elsbetiae_contig5673.14033.1|Name=mRNA_L-elsbetiae_contig5673.14033.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp MRIEDRVIPARFLVTIGHLVGVALVFKTKSDNVYAGLSYDPTVAEVAAATback to top mRNA from alignment at L-elsbetiae_contig5673:10132..11324+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5673.14033.1 ID=mRNA_L-elsbetiae_contig5673.14033.1|Name=mRNA_L-elsbetiae_contig5673.14033.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1193bp|location=Sequence derived from alignment at L-elsbetiae_contig5673:10132..11324+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5673:10132..11324+ >mRNA_L-elsbetiae_contig5673.14033.1 ID=mRNA_L-elsbetiae_contig5673.14033.1|Name=mRNA_L-elsbetiae_contig5673.14033.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=678bp|location=Sequence derived from alignment at L-elsbetiae_contig5673:10132..11324+ (Laminarionema elsbetiae ELsaHSoW15)back to top |