mRNA_L-elsbetiae_contig5660.14013.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Match: D7G1F4_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F4_ECTSI) HSP 1 Score: 167 bits (424), Expect = 5.160e-45 Identity = 89/141 (63.12%), Postives = 105/141 (74.47%), Query Frame = 2 Query: 53 MHAEKKRLAAAFVEESLSAETDAAAAASP-EG-GLSSTEAAGPTFQVWSKDSHAFCTECEDTRADVLCQGCDEEYCSLCWAFLHRKGERLRHGTTPLRSEGDVAPPPEAVEGSGWFAGVWPSQKPKSTPRS--PAAAAGGA 463 M EKKR AAA V AAA+S EG GLS+T+AAGPTFQVWS+DSH FCTECEDTRA VLC CDE YCSLCWA LHR+GER +H T PL SE ++APPPEA+E SGW AGVWPSQ+P+++P PA+++ A Sbjct: 1 MMQEKKRAAAALVNGIAGNGNGRAAASSAVEGQGLSNTKAAGPTFQVWSRDSHGFCTECEDTRATVLCHECDEAYCSLCWAALHRRGERAKHETIPLGSEEELAPPPEALEESGWLAGVWPSQRPRASPHPAIPASSSSSA 141
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Match: A0A6H5KSQ1_9PHAE (B box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ1_9PHAE) HSP 1 Score: 163 bits (413), Expect = 6.840e-43 Identity = 78/120 (65.00%), Postives = 98/120 (81.67%), Query Frame = 2 Query: 119 AAAAASPEG-GLSSTEAAGPTFQVWSKDSHAFCTECEDTRADVLCQGCDEEYCSLCWAFLHRKGERLRHGTTPLRSEGDVAPPPEAVEGSGWFAGVWPSQKPKSTPR----SPAAAAGGA 463 AAA+++ EG GLSST+AAGPTFQVWS+DSH +CTECEDTRA VLC CDE YCSLCWA LHR+GER +H T PL SE ++APPPEA+E SGW AGVWPS +P+++P +P++++ GA Sbjct: 118 AAASSAVEGQGLSSTKAAGPTFQVWSRDSHGYCTECEDTRATVLCHECDEAYCSLCWAALHRRGERAKHETIPLGSEEELAPPPEALEESGWLAGVWPSHRPRASPHPAIPAPSSSSAGA 237
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Match: A0A068RQ12_9FUNG (B box-type domain-containing protein n=3 Tax=Lichtheimia TaxID=688353 RepID=A0A068RQ12_9FUNG) HSP 1 Score: 62.4 bits (150), Expect = 7.150e-8 Identity = 30/67 (44.78%), Postives = 36/67 (53.73%), Query Frame = 2 Query: 179 FQVWSKDSHA-FCTECEDTRADVLCQGCDEEYCSLCWAFLHRKGERLRHGT------TPLRSEGDVA 358 FQV S H FC EC D A V C+ CDE++C +C A LHR G R +H TPL+ G A Sbjct: 3 FQVASSSLHPLFCVECSDQEASVFCEQCDEDFCEVCHAMLHRTGNRRKHTARNLKVDTPLKDTGAAA 69
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Match: A0A1X2HX01_SYNRA (B box-type domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HX01_SYNRA) HSP 1 Score: 62.0 bits (149), Expect = 9.570e-8 Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 2 Query: 197 DSHAFCTECEDTRADVLCQGCDEEYCSLCWAFLHRKGERLRHGTTPLRSE 346 D+ AFC EC D A V C+ CDE++C +C A LHR G R +H LR E Sbjct: 8 DAKAFCVECRDQEASVFCEQCDEDFCEVCHAMLHRTGNRRKHIAKNLRVE 57
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Match: A0A165S1W7_9AGAM (B box-type domain-containing protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165S1W7_9AGAM) HSP 1 Score: 62.0 bits (149), Expect = 9.960e-8 Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 2 Query: 209 FCTECEDTRADVLCQGCDEEYCSLCWAFLHRKGERLRHGTTPL 337 +C ECED A V C+ C ++YCS+C+A HRKG R RH T PL Sbjct: 59 YCVECEDQPAQVQCETCGDDYCSVCFAAQHRKGSRKRHATKPL 101
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Match: A0A8H7RZV0_9FUNG (B box-type domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RZV0_9FUNG) HSP 1 Score: 60.1 bits (144), Expect = 4.390e-7 Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 2 Query: 191 SKDSHAFCTECEDTRADVLCQGCDEEYCSLCWAFLHRKGERLRHGTTPLRSEG 349 S ++ +FC EC D A V C+ CDE++C +C A LHR G R +H LR G Sbjct: 6 SANTTSFCVECRDQEASVFCEQCDEDFCEVCHAMLHRTGNRRKHTAKNLRVRG 58
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Match: Q6C4D3_YARLI (YALI0E27720p n=4 Tax=Yarrowia TaxID=4951 RepID=Q6C4D3_YARLI) HSP 1 Score: 60.1 bits (144), Expect = 4.460e-7 Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 2 Query: 173 PTFQVWSKDSHAFCTECEDTRADVLCQGCDEEYCSLCWAFLHRKGERLRHGTTPLRS 343 P FQ C +C D AD CQGC+E++C +C+ ++HR G R +H T P+ + Sbjct: 32 PPFQDAPDTQMRMCVDCGDQPADKNCQGCEEDFCDVCFQYIHRTGNRSKHATLPIEN 88
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Match: A0A1E3PK74_9ASCO (B box-type domain-containing protein n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PK74_9ASCO) HSP 1 Score: 58.5 bits (140), Expect = 1.510e-6 Identity = 22/49 (44.90%), Postives = 33/49 (67.35%), Query Frame = 2 Query: 200 SHAFCTECEDTRADVLCQGCDEEYCSLCWAFLHRKGERLRHGTTPLRSE 346 S+ C EC D +D LC+ C EE+C +C+ +LHR G RL+H T ++S+ Sbjct: 55 SNGLCVECGDQPSDKLCKQCQEEFCDVCFNYLHRTGRRLQHETMGVKSD 103
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Match: A0A163CVL3_PHYB8 (B box-type domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A163CVL3_PHYB8) HSP 1 Score: 57.8 bits (138), Expect = 2.670e-6 Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 2 Query: 206 AFCTECEDTRADVLCQGCDEEYCSLCWAFLHRKGERLRH 322 AFC EC+D A V C+ CDE++C +C A LHR G R +H Sbjct: 8 AFCVECKDQEASVFCEQCDEDFCEVCHAMLHRTGNRRKH 46
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Match: I1BYM3_RHIO9 (B box-type domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BYM3_RHIO9) HSP 1 Score: 54.7 bits (130), Expect = 2.940e-5 Identity = 21/43 (48.84%), Postives = 25/43 (58.14%), Query Frame = 2 Query: 209 FCTECEDTRADVLCQGCDEEYCSLCWAFLHRKGERLRHGTTPL 337 FC EC D A V C+ CDE++C +C A LHR G R H L Sbjct: 13 FCVECNDQEASVFCEQCDEDFCEVCHAMLHRTGSRKLHTAKKL 55 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5660.14013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5660.14013.1 >prot_L-elsbetiae_contig5660.14013.1 ID=prot_L-elsbetiae_contig5660.14013.1|Name=mRNA_L-elsbetiae_contig5660.14013.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp MMMHAEKKRLAAAFVEESLSAETDAAAAASPEGGLSSTEAAGPTFQVWSKback to top mRNA from alignment at L-elsbetiae_contig5660:4436..6987+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5660.14013.1 ID=mRNA_L-elsbetiae_contig5660.14013.1|Name=mRNA_L-elsbetiae_contig5660.14013.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2552bp|location=Sequence derived from alignment at L-elsbetiae_contig5660:4436..6987+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5660:4436..6987+ >mRNA_L-elsbetiae_contig5660.14013.1 ID=mRNA_L-elsbetiae_contig5660.14013.1|Name=mRNA_L-elsbetiae_contig5660.14013.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1158bp|location=Sequence derived from alignment at L-elsbetiae_contig5660:4436..6987+ (Laminarionema elsbetiae ELsaHSoW15)back to top |