mRNA_L-elsbetiae_contig5654.14004.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Match: A0A6H5LAT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAT6_9PHAE) HSP 1 Score: 403 bits (1035), Expect = 2.590e-135 Identity = 205/265 (77.36%), Postives = 227/265 (85.66%), Query Frame = 3 Query: 255 TPSSDSAALFSAKETQRAEIMEALFGATYDERIEKGRAAQGFLTTDALATRTLVPPRELTYGEYELDFFLSLVSECLSLRIGGDGT--GSVSALESEARSLVFGDIGSGCGRLVVAQALTWPWRACRGVEIVPSLHDMGEASLTAAGRIAGGGATNISPEALGLLKTMAPCSLSLGDVNDEVDISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSDGPWEFTLLGEREGTNAETGGKSIAYMWQVVKSAL 1043 T S D A A E RA +++ LFG +Y ERIE GR AQGFLTTDALA RTLVPPRELTYGEY+LDFFLSLV+ECL+LR G G SV ALE+EARSL+FGDIGSGCGRLVVAQALTWPW++CRGVEIVPSLHDMG+A+L A R+A G +SPE LL++MAPCSLSLGDVND+VDISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSDGPWEF LLGEREG N+ETGGKSIAY+W+VV+SAL Sbjct: 38 TRSCDPPAAALANEDGRAGVLDILFGGSYQERIEIGRDAQGFLTTDALAARTLVPPRELTYGEYDLDFFLSLVAECLNLRAGNSGKDDSSVGALEAEARSLIFGDIGSGCGRLVVAQALTWPWKSCRGVEIVPSLHDMGQAALQEADRLAKGEENALSPETSRLLRSMAPCSLSLGDVNDDVDISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSDGPWEFALLGEREGRNSETGGKSIAYIWEVVRSAL 302
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Match: D7G834_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G834_ECTSI) HSP 1 Score: 163 bits (413), Expect = 2.150e-45 Identity = 76/85 (89.41%), Postives = 82/85 (96.47%), Query Frame = 3 Query: 789 EVDISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSDGPWEFTLLGEREGTNAETGGKSIAYMWQVVKSAL 1043 +V ISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKL+PGAQVITTDRRLVSDGPWEF LLGEREG N+ETGGKSIAY+W+VV+SAL Sbjct: 3 QVGISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLQPGAQVITTDRRLVSDGPWEFALLGEREGRNSETGGKSIAYIWEVVRSAL 87
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Match: D7FPV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPV7_ECTSI) HSP 1 Score: 149 bits (376), Expect = 1.660e-39 Identity = 76/106 (71.70%), Postives = 88/106 (83.02%), Query Frame = 3 Query: 483 LSLRIG--GDGTGSVSALESEARSLVFGDIGSGCGRLVVAQALTWPWRACRGVEIVPSLHDMGEASLTAAGRIAGGGATNISPEALGLLKTMAPCSLSLGDVNDEV 794 +SLR G G+ SV ALE+EARSLVFGDIGSGCGRLVVAQALTWPW++CRGVEIVPSLHDMG+ +L A R+A G +SPE L LL++MAPCSLSLGDVND+V Sbjct: 15 ISLRAGKSGNDASSVGALEAEARSLVFGDIGSGCGRLVVAQALTWPWKSCRGVEIVPSLHDMGQVALQEADRVAKGDENTLSPETLRLLRSMAPCSLSLGDVNDDV 120
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Match: A0A835Z2B1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B1_9STRA) HSP 1 Score: 133 bits (334), Expect = 9.320e-33 Identity = 76/174 (43.68%), Postives = 100/174 (57.47%), Query Frame = 3 Query: 570 SGCGRLVVAQALTWPWRACRGVEIVPSLHDMGEASLTAAGRIAGGGATNISPEALGL--------LKTMAPCSLSLGDV------NDEVDISD-IDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSD-GPWEFTLLGEREGTNAETGGKSIAYMWQVVKSAL 1043 +G +V+ QAL PW+ C GVEIVP+LHD+ A+L A R L+ +APC+L LGD+ D + DV+FCY S++PA GDLLT S+ L LR GA V+TTDRRL S+ G WEF L REG NAETGG S+AY+W+V ++ + Sbjct: 7 NGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQNGV 180
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Match: A0A7S1HJW0_HEMAN (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HJW0_HEMAN) HSP 1 Score: 123 bits (308), Expect = 7.970e-28 Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 426 ELTYGEYELDFFLSLVSECLSLRIGGDGTGSVSALESEARSLVFGDIGSGCGRLVVAQALTWPW-RACRGVEIVPSLHDMGEASLTAAGRIAGGGATNISPEALGLLKTMAPCSLSLGDVNDEVDI-SDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSDGPWEFTLLGEREGTNAETGGKSIAYMWQVVKS 1037 E TYGE +L+ F ++ AL VF D GSGCGRLV+ A+ +P + CRG+EI LHD ++L A +G G T L + L +G+ ++ + D+D++FCYS++F + G +LT+ S LG ++ GA+VIT D+ LVSDGPWEF +G EG N+E G S+ Y+++VVKS Sbjct: 119 EYTYGELDLELFEPMM-----------------ALAEPKEGDVFCDFGSGCGRLVIYSAIAYPQLKECRGLEIQEVLHDAAVSALDEAR--SGKGTTEEEQRLLQGDRVR----LKVGNAYEDPGLLQDVDLMFCYSTAFDSVGPMLTQLSACLGRNMKVGARVITVDKMLVSDGPWEFEEMGMLEGRNSELGS-SVGYLYRVVKS 300
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Match: A0A7S0DXC4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DXC4_9EUKA) HSP 1 Score: 118 bits (296), Expect = 1.590e-27 Identity = 74/165 (44.85%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 561 DIGSGCGRLVVAQALTWP--WRACRGVEIVPSLHDMGEASLTAAGRIAGGGATNISPEALGLLKTMAPCSLSLGDVND-EVDISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSDG--PWEFTLLGEREGTNAETGGKSIAYMWQVVKSA 1040 D GSGCGRLVVA + WP RA G+E V LH +G A++ + E A +L GD +D ++ DV+F YSS+F + GDLLT+FSY+ G +LR G +V+TTD+RL SD PW+F LL EG N ETGG SI Y+ +VV+SA Sbjct: 26 DCGSGCGRLVVAASALWPELGRAV-GIEKVEPLHALGMAAVA-----------QLPAE------QQARLTLLCGDAHDLPEEMRQADVVFAYSSAFASQGDLLTDFSYSCGTRLREGTRVVTTDKRLASDDHTPWQFELLDTLEGPNLETGGSSIGYVQRVVRSA 172
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Match: A0A7S2V145_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V145_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.510e-24 Identity = 92/277 (33.21%), Postives = 132/277 (47.65%), Query Frame = 3 Query: 342 DERIEKGRAAQGFLTTDALATR---TLVPPRELTYGEYELDFFLSLVSECLSLRIGGDGTGSVSALESEARS-LVFGDIGSGCGRLVVAQALTWPWRACR------------GVEIVPSLHDMGEASLT--------------AAGRIAGGGATNI------SPEALGLLKTMAPCSLS---LGDVNDEVDISDI----DVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSDGPWEFTLLGEREGTNAETGGKSIAYMWQVVKSAL 1043 DER E GR AQG T T ELTYGE+++ FF++LV++ L L S+ + F D+GSGCGRLV+A L + + + G+E+VP LH +G + A + T I SP+ + + A L + EV + + V+FCYSS+ +FGD L + S+ LG + G +ITTD++LVSDGPW+F LL EG N ETGG S Y+W+V++S + Sbjct: 125 DERFEIGRNAQGLFTDPNNPFGKFDTFGLDSELTYGEFDVAFFVNLVNKAL--------------LYSKFQGPRCFLDVGSGCGRLVLAAQLCFGHVSNQNSLKAGLLNEFVGIEVVPGLHHVGLKCMQYYQHMHEQKNNCEKANTHLKNNNITLICGDIYESPDTVITSENHASFEFQKRQLDEPRAEVTMGSVLSRAGVIFCYSSALASFGDELGQLSFALGTTAQVGTLIITTDKKLVSDGPWKFQLLETVEGPNEETGGMSTGYIWKVLQSGV 387
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Match: L1JW98_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JW98_GUITC) HSP 1 Score: 103 bits (258), Expect = 2.200e-23 Identity = 49/83 (59.04%), Postives = 62/83 (74.70%), Query Frame = 3 Query: 798 ISDIDVLFCYSSSFPAFGD-LLTEFSYTLGHKLRPGAQVITTDRRLVSDGPWEFTLLGEREGTNAETGGKSIAYMWQVVKSAL 1043 ++DIDV FCYS++F FG L + SYTLGH L+PG++VIT D+ LVSDGPWEF LL +G N E GG S Y+W+VVKSA+ Sbjct: 1 LNDIDVCFCYSTAFSTFGGPYLAQLSYTLGHSLKPGSRVITVDKMLVSDGPWEFQLLHSIDGKNEEVGG-STGYIWKVVKSAV 82
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Match: A0A7S3SUZ4_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SUZ4_EMIHU) HSP 1 Score: 105 bits (262), Expect = 5.470e-22 Identity = 83/237 (35.02%), Postives = 120/237 (50.63%), Query Frame = 3 Query: 336 TYDERIEKGRAAQGFLTTDALATRTLVPPR-ELTYGEYELDFFLSLVSECLSLRIGGDGTGSVSALESEARSLVFGDIGSGCGRLVVAQALTWPWRA-CRGVEIVPSLHDMGEASLTAAGRIAGGGATNISPEALGLLKTMAPCSLSLGDVNDEVDISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSDGPW-EFTLLGEREGTNAETGGKSIAYMWQVVKS 1037 +Y +R+ GR AQ + +T + P LTYGE++L FF +LV L+ G E + V D+GSGCGRLV+A + WP A GVE LH M ++ A R + + +AL ++ P + D V+FCYSS++ + G LT+FS +G PG +V+ TD+ L DG EF L+ E EG N ETGG S+ Y+++VV+S Sbjct: 42 SYSDRMMVGRRAQLGESMVWRSTLSAEPDNGHLTYGEFDLAFFGALVDRALARPAG----------RREPETFV--DVGSGCGRLVLAASCVWPELARAAGVETCADLHMM---AVRAQARASLPRCDFVHGDALQAMREGGP-------------LDDATVVFCYSSAWASEGGALTDFSELVGCCCLPGCRVVVTDKWLECDGSCGEFALIDEVEGPNRETGG-SVGYIYEVVRS 249
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Match: A0A7S0Q107_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q107_9EUKA) HSP 1 Score: 102 bits (253), Expect = 1.310e-21 Identity = 71/168 (42.26%), Postives = 90/168 (53.57%), Query Frame = 3 Query: 555 FGDIGSGCGRLVVAQALTWPWRA-CRGVEIVPSLHDMG-EASLTAAGRIAGGGATNISPEALGLLKTMAPCSLSLGDVNDEV------DISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSD--GPWEFTLLGEREGTNAETGGKSIAYMWQV 1028 F D+GSGCGRLV A A+ P + C GVE V LHD+ EA+ T SP G PC GD + + ++ D +F YSS+FP+ GD LT+ S L G ++ITTD+RL SD G WEF LL E +G NAETGG S Y+W+V Sbjct: 10 FVDVGSGCGRLVFAAAVLQPSLSRCVGVEKVAGLHDLACEAAST-------------SPLPAG----SPPCEFLCGDAFEFLGTPPPYSLAAPDCIFIYSSAFPSAGDTLTDASLAFS-MLPAGTRIITTDKRLGSDEAGRWEFQLLKELDGPNAETGGTSTGYIWEV 159 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5654.14004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5654.14004.1 >prot_L-elsbetiae_contig5654.14004.1 ID=prot_L-elsbetiae_contig5654.14004.1|Name=mRNA_L-elsbetiae_contig5654.14004.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=325bp MAVSKKNILGYTLVALTSYHQPSHAFVSRYPTCATANHQRRRGEAVLVSGback to top mRNA from alignment at L-elsbetiae_contig5654:5894..9706- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5654.14004.1 ID=mRNA_L-elsbetiae_contig5654.14004.1|Name=mRNA_L-elsbetiae_contig5654.14004.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3813bp|location=Sequence derived from alignment at L-elsbetiae_contig5654:5894..9706- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5654:5894..9706- >mRNA_L-elsbetiae_contig5654.14004.1 ID=mRNA_L-elsbetiae_contig5654.14004.1|Name=mRNA_L-elsbetiae_contig5654.14004.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1950bp|location=Sequence derived from alignment at L-elsbetiae_contig5654:5894..9706- (Laminarionema elsbetiae ELsaHSoW15)back to top |