mRNA_L-elsbetiae_contig565.13991.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig565.13991.1
Unique NamemRNA_L-elsbetiae_contig565.13991.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Match: A0A6H5JE81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE81_9PHAE)

HSP 1 Score: 749 bits (1935), Expect = 5.470e-268
Identity = 402/480 (83.75%), Postives = 421/480 (87.71%), Query Frame = 2
Query:  221 RISWIPGGGTASS-GTWCDQFKREPSSRRYLHPERTRHRLSMTASPARAEKRSAPLGGSRSVNWPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILYVIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIVLGTLGLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGFGGRPTKEIPASSADAPWSADLDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDMVVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFALTFQPSSLVVVELKKALFDDAPQSKMKELGWGGLFPFEWARSDNDLKSFSAMKGGLLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATTPKEFRKAFRFLEKDGXXXXXXXXXXXXXXXXXXXXXXXXXXKGAQPLAEDLQFLRDAEETLVGLGTLFPAAGLVDRSRR 1657
            R SW  G   A   G   ++  R  SS R L P + R      ++ A    R A   G RSVNWPLWYVLPIAPYQRRKTLMKEIVPG+VWTFDQLQGILYVIVPVRMTVIKL+KSEGGGLFVYAPVAPT EC+AMMR LEAEHGPVRHIVLGTLGLEHKVFAGPFAQRFS+ARVW+TPGQYSFPIGLPLSWLGFGGRPTKEIPASS DAPW ADLDH+VLGPFFSKDGSGGYGETAFFHK TKTLLVTDMVVKVED+VPEIVCEDPRPLLFHARD+ALERVEDTPEVRLKGWRRIVQFALTFQPSSL VVELKKALFDDAPQSKMKELGWGGLFPFEW  S +DLKSFSAMKGGLLVAPILQVLLLNRDP PVLDWADRVAKWPF+RVIPCHLANDV+ TPKEFRKAFRFLEK G XXXXXXXXXXXXXXXXXXXXX    +GAQPL EDLQFLRDAE+TLV LGTLFPA   +DRSRR
Sbjct:   52 RASWASGYDAARGRGGRFEEGNRRLSSLR-LRPSQQRLTKMAASTTAETGGRPAASTGPRSVNWPLWYVLPIAPYQRRKTLMKEIVPGKVWTFDQLQGILYVIVPVRMTVIKLDKSEGGGLFVYAPVAPTGECMAMMRKLEAEHGPVRHIVLGTLGLEHKVFAGPFAQRFSEARVWYTPGQYSFPIGLPLSWLGFGGRPTKEIPASSEDAPWGADLDHQVLGPFFSKDGSGGYGETAFFHKDTKTLLVTDMVVKVEDQVPEIVCEDPRPLLFHARDNALERVEDTPEVRLKGWRRIVQFALTFQPSSLEVVELKKALFDDAPQSKMKELGWGGLFPFEWRSSSDDLKSFSAMKGGLLVAPILQVLLLNRDPGPVLDWADRVAKWPFQRVIPCHLANDVSATPKEFRKAFRFLEKGGSXXXXXXXXXXXXXXXXXXXXX----RGAQPLPEDLQFLRDAEKTLVELGTLFPAEEPIDRSRR 526          
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Match: A0A7S3XLP8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLP8_HETAK)

HSP 1 Score: 476 bits (1225), Expect = 2.350e-160
Identity = 246/440 (55.91%), Postives = 304/440 (69.09%), Query Frame = 2
Query:  314 PERTRHRLSMTASPARAEKRSAPLGGSRSVNWPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILYVIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIVLGTLGLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGFGGRPTKEIPASSADAPWSADLDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDMVVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFALTFQPSSLVVVELKKALFDDAPQSKMKELGWGGLFPFEWARSDNDLKSFSAMK--GGLLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATTPKEFRKAFRFLEKDGXXXXXXXXXXXXXXXXXXXXXXXXXXKGAQPLAEDLQFLRDAEETLVGLGTLFP 1627
            P R+   + M A+   A K+S+P     + +WP W++LPIAPYQ+R+T+M+E+V  ++WTFDQLQGILYV+VP+RMTVIK+E   GGGLFVYAPVAPT E +  MR LEA HGPVRH+VL TLGLEHKVFAGPFAQ+F +A VW+ PGQYSFP  LP+SWLGFG R  KE+P   + AP++ + D+ V+GP  SKD  GG+GE AFFH  TKTLLVTD+VV+V + +P IV +DPR LLFHARD A E V DTP VR KGWR + QFAL FQPS+L  V L +AL  DA  S MKELGWGGL+PF W R D    SF AMK  GGLLVAPILQ LLL+R+ + V  + D VA+WPF R++PCHL N++   P E+ +AF FLE                             K  Q L++D+ FL +AE+ LV  GTLFP
Sbjct:   90 PRRSSSAIHMGATTG-AMKKSSP-----AKDWPFWFILPIAPYQKRETVMEEVVKDKIWTFDQLQGILYVVVPIRMTVIKME---GGGLFVYAPVAPTGEVMEQMRALEAAHGPVRHVVLPTLGLEHKVFAGPFAQKFPRAEVWYCPGQYSFPFKLPVSWLGFGFRKVKELPKDPSTAPFAPEFDYRVVGPLLSKDKIGGFGEAAFFHAPTKTLLVTDVVVRVSERIPAIVAKDPRALLFHARDAADEVVADTPAVRAKGWRHLQQFALFFQPSALETVPLGQAL-RDARASPMKELGWGGLYPFAWTRDDRP--SFEAMKAGGGLLVAPILQCLLLSREVQKVARFRDEVAEWPFERIVPCHLENNLRAGPDEWLEAFSFLED--------------------VEGLPPLLKPIQVLSDDVDFLNEAEKALVAAGTLFP 497          
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Match: A0A7S2RA79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA79_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 1.290e-138
Identity = 227/420 (54.05%), Postives = 275/420 (65.48%), Query Frame = 2
Query:  407 WPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILYVIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIVLGTLGLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGF--GGRPTKEIPASSADA-------PWSADLDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDMVVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFALTFQPSSLVVVELKKALFDDAPQSK-MKELGWGGLFPFEWARSDNDL--KSFSAMKGG--LLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATTPKEFRKAFRFLEKDGXXXXXXXXXXXXXXXXXXXXXXXXXXKGAQPLAEDLQFLRDAEETLVGLGTLF 1624
            W LW  LPIAPY RRKT+ KE+VP ++WTFDQLQG LYV VPVRMT++KLE    GGLFVYAPVAPT ECLA++R LE EHG V  IVL T+ +EHKVFAG F++ F +A VW  P QYSFPI LPL +LGF   GR T+ +PASS +        PW A+ +HE+LGP     G+G + ETAFFHK T TLLV D +VKV D  P IV +D R LL+HARD+  + V DTPE+R KGW+RI  FAL FQP  L VVE+ +   D A   + MK+LGW GL+PFEW   DN    +SF A++ G  LLVAPILQVL+LNR PE V+ WADRV+ W F R+IPCH ++ +   P EFR AF FLE                             +GA+PLAED Q L DAE  LV  G++F
Sbjct:   77 WALWPALPIAPYGRRKTIRKEVVPEKIWTFDQLQGTLYVHVPVRMTIVKLE---AGGLFVYAPVAPTRECLALVRELEEEHGEVSTIVLPTVAVEHKVFAGVFSRSFPKASVWVAPAQYSFPINLPLEFLGFPLDGR-TRILPASSKECRGTPDAPPWLAEFEHEILGPLDDAKGNGAFVETAFFHKTTGTLLVVDTIVKVPDSPPAIVEDDTRALLYHARDNFRQVVTDTPEIRRKGWKRISLFALFFQPPFLDVVEVPQCFLDAAETPEPMKKLGWAGLYPFEW---DNQAVERSFQALRSGTGLLVAPILQVLILNRQPETVIRWADRVSAWKFSRIIPCHFSSPIEAGPAEFRSAFNFLED-----------------VAVDISPIVGTQGARPLAEDFQALLDAEAGLVKSGSIF 472          
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Match: A0A6T1YV01_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T1YV01_9EUGL)

HSP 1 Score: 398 bits (1023), Expect = 7.950e-129
Identity = 208/412 (50.49%), Postives = 267/412 (64.81%), Query Frame = 2
Query:  404 NWPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILYVIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIVLGTLGLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGFGGRPTKEIPASSADAPWSADLDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDMVVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFALTFQPSSLVVVELKKALFD--DAPQSKMKELGWG--GLFPFEWARSDNDLKSFSAMKGGLLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATTPKEFRKAFRFLEKDGXXXXXXXXXXXXXXXXXXXXXXXXXXKGAQPLAEDLQFLRDAEETLVGLGTLFP 1627
            +W LW  LP+ PY R+ TL  E+V   +WT DQ+QG + V+VP+R TVIKL+   GGGL+V+ P+APT E + MMR LE +HGPV+HIVLGTLG+EHK  AGPF+++F QA+VW  PGQYSFP+ LP  +LGF G   + +P    D P+S ++D+ + GP       GG+GET FFHK T+TLLVTD +V+V D+ P IV EDPR LLFHARD   E + ++P+ R KGWRRI QF L F PS+L VV   +++ D    P+S MK LG    GL P+ W R D    SF A++GGLLVAPIL+ L+ NR PE  L+WAD+V+KWPF+R+IPCHLAND+   P+EFR AF FLEK                            K   PL ED + LR+  ETL+  G L P
Sbjct:  205 SWGLWPTLPLQPYGRKVTLETEVVKDTIWTHDQIQGTVNVVVPIRQTVIKLK---GGGLWVHNPIAPTRELIDMMRRLEEKHGPVKHIVLGTLGIEHKFTAGPFSRKFRQAQVWVMPGQYSFPLNLPNLFLGFTGGKPRVLPEDPKDCPFSDEIDYIIFGPL-QFQSVGGFGETGFFHKKTRTLLVTDAIVEVRDDPPAIVTEDPRALLFHARDAIDEEIVNSPQTRRKGWRRIAQFGLNFLPSALDVVPAVESITDLQKVPKS-MKNLGGVPYGLTPWRWTRDDRP--SFKALQGGLLVAPILRELIFNRFPEETLEWADKVSKWPFQRIIPCHLANDIKAGPQEFRAAFEFLEKS-----------------KSKSVFPVAGKKPGPLFEDGKLLRELNETLISSGVLPP 592          
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Match: UPI000478A912 (DUF4336 domain-containing protein n=1 Tax=Fischerella sp. PCC 9605 TaxID=1173024 RepID=UPI000478A912)

HSP 1 Score: 389 bits (999), Expect = 5.180e-128
Identity = 190/361 (52.63%), Postives = 255/361 (70.64%), Query Frame = 2
Query:  392 SRSVNWPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILYVIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIVLGTL-GLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGFGGRPTKEIPASSADAPWSADLDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDMVVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFALTFQPSSLVVVELKKALFDDAPQSKMKELGWGGLFPFEWARSDNDLKSFSAMKGG--LLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATTPKEFRKAFRFLEKDG 1465
            S+  +WP W VLPI P+ RR+TL KE+V   +WTFDQLQGI YV+VP+RMTV+KLE    GGL +YAP+APT EC+ +++ L AEHG V++I+L T+ GLEHK+F GPFA++FS A+V+  P Q+SFPI LPLSWLGF  R T+ +P +S+D P++ + D+ +LGP   + G G + E AFFHK ++TLLVTD+V+ + +  PEIV  DP PLLFHA+DDA  RV DT   R KGW+RI  FA  FQPS+L V+ + +        +      + GLFPF+W   +N  +SF A++GG  L VAPILQ L+LNR P   +DWA++VA W F+R+IPCHL + +  TP +FR+AF FLEK G
Sbjct:   15 SKDWSWPFWPVLPIYPFGRRRTLRKEVVKDTIWTFDQLQGIFYVVVPIRMTVVKLE---AGGLLIYAPIAPTPECIRLVKELVAEHGDVKYIILPTISGLEHKIFVGPFARKFSNAQVFIAPKQWSFPINLPLSWLGFPKRRTQVLPPNSSDTPFANEFDYAILGPI--ELGPGRFAEVAFFHKRSRTLLVTDIVLSIPEVPPEIVQLDPYPLLFHAKDDAFHRVFDTEANRRKGWQRISLFAFYFQPSALEVIGIGEVFRHALGATDRSRKAYFGLFPFKW--KNNWQQSFEALRGGGRLFVAPILQALILNRAPRETIDWANKVASWDFQRIIPCHLDSPIEATPSQFRQAFAFLEKQG 368          
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Match: UPI0020201A4C (DUF4336 domain-containing protein n=1 Tax=Chroococcidiopsis sp. CCMEE 29 TaxID=155894 RepID=UPI0020201A4C)

HSP 1 Score: 388 bits (996), Expect = 1.850e-127
Identity = 201/417 (48.20%), Postives = 267/417 (64.03%), Query Frame = 2
Query:  392 SRSVNWPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILYVIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIVLGTL-GLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGFGGRPTKEIPASSADAPWSADLDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDMVVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFALTFQPSSLVVVELKKALFDDAPQSKMKELGWGGLFPFEWARSDNDLKSFSAMKGG--LLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATTPKEFRKAFRFLEKDGXXXXXXXXXXXXXXXXXXXXXXXXXXKGAQPLAE-DLQFLRDAEETLVGLGTLFPA 1630
            SR  +WP W  +P+ PY +R+TL  E++   +WTFDQLQGILY +VP+RMTV+KLE    GGL VYAPVAPT EC+ +++ LEA+HG V++I+L T  GLEHKVF GPFA+RF  A+V+  P Q+SFP+ LPLSWLGF  R T+ +PA S  AP++ + D+E+L       G G +GE A FHK ++TLLVTD V+ V ++ P IV  DP PLLFHARD+A +  ED+   R KGW+RI  FA+ F+PS++ ++ L++A  D    S      + GLFPF W   DN  +SF A++GG  L VAPILQ L+L++ P  VLDWAD+VA W F+R+IPCH  + V   P++FR+AF FLE                              G QPL E D +FLR+ EE L+  G   PA
Sbjct:   21 SRDFSWPFWLAVPLYPYGKRRTLRHEVIKDTIWTFDQLQGILYTVVPIRMTVVKLE---AGGLLVYAPVAPTTECIRLVKELEAKHGDVKYIILPTASGLEHKVFVGPFARRFPNAQVFVAPNQWSFPLNLPLSWLGFPSRRTRVLPADSTKAPFANEFDYEILDIDL---GRGSFGEVALFHKRSRTLLVTDTVLSVPEDPPAIVQLDPYPLLFHARDNAFDATEDSEASRRKGWQRISLFAVYFRPSAMEMIGLRQAFRDALKASNWSRKAYFGLFPFRW--KDNWKQSFDALRGGGRLFVAPILQTLILSQAPRQVLDWADKVALWDFQRIIPCHFDSPVEAGPRQFRQAFAFLEH------------------------RLFEHGNQPLPEEDFEFLRELEEELIRRGIASPA 405          
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Match: A0A7R9YE05_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE05_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 2.680e-127
Identity = 207/429 (48.25%), Postives = 269/429 (62.70%), Query Frame = 2
Query:  392 SRSVNWPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILYVIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIVLGTLGLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGFGGRPTKEIPASSA------DAPWSAD--LDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDMVVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFALTFQPSSLVVVELKKALFDDAPQSKMKELGWGGLFPFEWARSDNDLKSFSAMKGG--LLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATTPKEFRKAFRFLEKDGXXXXXXXXXXXXXXXXXXXXXXXXXXKGAQPLAEDLQFLRDAEETLVGLGTLFPAAGLVDR 1648
            S    + LW  LPIAPY RRKT+++E+  G++W F+Q QGILYV VPVRMTVI+L+    GGLFVYAPVAPT E L  MR LE+++G V++IVL T  +EHKVFAGPFA  F +A  W  P Q+SFP+ LPLS+LGFG R    +P SS+        PW+AD  LDH  LGP  SK   GG+ E AF+H+ ++TLLVTD VV + ++ P I+ +DPRPLLFHA+DDA + V+D+ + R KGW+RI  F   FQP+ L V    +A F +A ++ MK LGWGGL+PF W   D    SF A++G   L VAPIL+ L+ NR P  VLDW D + +W F +V+P HL   VA +P++FRKAF FL +D                              +PL ED +FLR+  ++L   GT FPA   V R
Sbjct:   74 SEETFYKLWPALPIAPYSRRKTVVREVAKGRMWLFEQKQGILYVQVPVRMTVIRLDS---GGLFVYAPVAPTKEVLRTMRELESKYGEVKYIVLPTTAVEHKVFAGPFANAFPEASAWVVPDQWSFPVQLPLSFLGFGFRKFSSLPPSSSVGSGKETVPWAADGELDHVCLGPLLSKGAGGGFEEAAFYHRPSRTLLVTDAVVSIPNDPPPILQDDPRPLLFHAKDDAFDTVQDSAQARRKGWQRIALFGFFFQPAKLDVRTWPEA-FAEAKKNPMKGLGWGGLYPFAW--QDGWQASFEALRGNGRLQVAPILKELIFNRKPAEVLDWVDEICEWDFNKVVPAHLDAPVAASPRDFRKAFDFLIED------------PAMKLPLFELFNAKAASPKPLDEDCEFLRETSDSLTKSGTTFPAMPPVKR 484          
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Match: UPI00187FE233 (DUF4336 domain-containing protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI00187FE233)

HSP 1 Score: 381 bits (979), Expect = 6.730e-125
Identity = 197/415 (47.47%), Postives = 265/415 (63.86%), Query Frame = 2
Query:  395 RSVNWPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILYVIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIVLGTL-GLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGFGGRPTKEIPASSADAPWSADLDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDMVVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFALTFQPSSLVVVELKKALFDDAPQSKMKELGWGGLFPFEWARSDNDLKSFSAMKGG--LLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATTPKEFRKAFRFLEKDGXXXXXXXXXXXXXXXXXXXXXXXXXXKGAQPLAE-DLQFLRDAEETLVGLGTLFP 1627
            R ++W  W  +P+ PY RR+T+ KE+V  ++WTFDQLQGILYV+VP+RMTV+KL+    GGL +YAPVAPT EC+ +++ L AEHG V++I+L T+ GLEHKVF GPFA+RF +++V+  P Q+SFP+ LPLSWLG   + T  +P  S+ AP++   D+ +LGP   + G G + E AFF K ++TLLVTD+VV V DE PEIV  DP PLLFHA+D A + VED PE R KGW+RI  FA  FQPS+L  +   +   +          G+ GLFPF W   DN  +SF+ + GG  L VAPILQ L+LNR P+  +DWAD+VA W F R++PCHL + +  +P++FR+AF FLE                              G+QPL E D  FLR+ +E L   G + P
Sbjct:   15 RDLSWLFWPAMPLYPYGRRQTIRKEVVKDKIWTFDQLQGILYVVVPIRMTVVKLDT---GGLLIYAPVAPTRECIRLVKELVAEHGDVKYIILPTISGLEHKVFVGPFARRFPKSQVFVAPKQWSFPVNLPLSWLGCPAKRTSVLPTDSSKAPFADQFDYGILGPL--ELGPGRFAEVAFFDKRSRTLLVTDLVVSVPDEPPEIVQLDPYPLLFHAKDSAFDSVEDNPENRRKGWQRISLFAFYFQPSALETIGWGQVFRNALKAPNRSRKGYFGLFPFRW--QDNWKQSFNTLGGGGRLFVAPILQTLILNRAPQATIDWADKVASWNFERIVPCHLDSPIEASPRQFRQAFAFLE------------------IKFSSPEGVLANGSQPLLEKDFGFLREIDERLTKRGIVPP 404          
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Match: A0A2W1JMM4_9CYAN (Uncharacterized protein n=1 Tax=Acaryochloris thomasi RCC1774 TaxID=1764569 RepID=A0A2W1JMM4_9CYAN)

HSP 1 Score: 380 bits (977), Expect = 1.490e-124
Identity = 192/356 (53.93%), Postives = 255/356 (71.63%), Query Frame = 2
Query:  407 WPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILYVIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIVLGTL-GLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGFGGRPTKEIPASSADAPWSADLDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDMVVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFALTFQPSSLVVVELKKALFD--DAPQSKMKELGWGGLFPFEWARSDNDLKSFSAMKGG--LLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATTPKEFRKAFRFLEK 1459
            WPLW ++PI PY +R+TL KEI+  Q+WTF+QLQGILYVIVPVRMTVIKL++   GGL VYAPVAPT ECL +M+ L  +HG V++I++ T  G+EHK FAGPFA++F  A+++  PGQ+SFP+ LPLSWLG  GR T+ +P   +  P++ + D+++LGP     G G + E AF HK T+TLLVTD+VV V D+ PEI+ ++P P+L+HA+DDA E VEDTP  R KGW+RI  FA  F+PS+L V    ++  D   AP    K   + GLFP  W     D  SF A++GG  L VAPILQ L+LNR P+ V+DWA++VA+W F+++IPCHL   V TTP++FR AFRFLE+
Sbjct:   25 WPLWPLVPIYPYSKRRTLRKEIIKNQIWTFEQLQGILYVIVPVRMTVIKLKE---GGLLVYAPVAPTKECLRLMQELVDKHGSVKYIIMPTASGIEHKAFAGPFARKFPTAQIFVVPGQWSFPVKLPLSWLGLPGRRTQILPVDGSQTPFADEFDYKILGPVDL--GPGPFAEVAFLHKRTQTLLVTDVVVSVSDKPPEILEQEPYPMLYHAKDDASEVVEDTPATRRKGWQRIALFAFFFRPSALEVTGWGQSFRDAWQAPDRSSK--AYFGLFPVRWRSDWKD--SFDALRGGGRLFVAPILQKLVLNRGPKIVIDWANQVAEWKFQQIIPCHLDAPVKTTPQQFRAAFRFLEQ 371          
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Match: A0A7S1ZID2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZID2_TRICV)

HSP 1 Score: 384 bits (985), Expect = 1.810e-124
Identity = 203/421 (48.22%), Postives = 272/421 (64.61%), Query Frame = 2
Query:  392 SRSVNWPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILYVIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIVLGTLGLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGFGGRPTKEIPASSADAP--WSADLDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDMVVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFALTFQPSSLVVVELKKALFDDAPQSKMKELG--WGGLFPFEWARSDNDLKSFSAMKGGLLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATTPKEFRKAFRFLEKDGXXXXXXXXXXXXXXXXXXXXXXXXXXKGAQPLAEDLQFLRDAEETLVGLGTLFPAAGLV 1642
            ++  ++ L+ VLP+ PY+ +KTL   +VPG+VWT+DQ  GIL V VPVR  VIKL    GGGLFVY PVA T E + M++ LE EHGPV+HIVLGT+ +EHKV+AG FAQ+F  A+VW  PGQYSFP  LP ++LGF    T  +P S+ADAP  W+ + D +  GP  S+DG+  +GET FFH+ TKTLLVTD VV+V DEVP I   DP PLL+HARD   + +EDTPEVR +GW+R+V F L FQPS++ + ++  AL     + + K++   + G++P++W   D+   SF A+ GGLLVAPILQ L+LNR+P  VLD+AD V++WP  R+IP HL ND+  T +++R+AF FLE+ G                             +PL  DLQ L DA E L+  G +     LV
Sbjct:   91 TKPTDYGLYGVLPVGPYKTKKTLETTVVPGEVWTYDQKFGILNVQVPVRSVVIKLR---GGGLFVYNPVAATPEFVGMVKALEKEHGPVKHIVLGTVAIEHKVYAGVFAQKFGAAKVWLQPGQYSFPSNLPDAFLGFPAGRTYPMPRSAADAPEEWNDNFDFKTFGPLISRDGA--FGETVFFHRDTKTLLVTDTVVEVTDEVPAIFDSDPNPLLYHARDTVTDVLEDTPEVRKRGWKRVVLFGLFFQPSAIQIKDVDTAL-----KERRKDINPDFAGIYPWDWVGEDD--ASFKALTGGLLVAPILQKLILNRNPVEVLDFADAVSRWPIERIIPAHLKNDLKYTGRDYREAFGFLEQTGMKPGLP-----------------------KPLEADLQTLTDANENLLEQGAIAKCPPLV 476          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig565.13991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE81_9PHAE5.470e-26883.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XLP8_HETAK2.350e-16055.91Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RA79_9STRA1.290e-13854.05Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6T1YV01_9EUGL7.950e-12950.49Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
UPI000478A9125.180e-12852.63DUF4336 domain-containing protein n=1 Tax=Fischere... [more]
UPI0020201A4C1.850e-12748.20DUF4336 domain-containing protein n=1 Tax=Chroococ... [more]
A0A7R9YE05_9STRA2.680e-12748.25Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
UPI00187FE2336.730e-12547.47DUF4336 domain-containing protein n=1 Tax=unclassi... [more]
A0A2W1JMM4_9CYAN1.490e-12453.93Uncharacterized protein n=1 Tax=Acaryochloris thom... [more]
A0A7S1ZID2_TRICV1.810e-12448.22Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig565contigL-elsbetiae_contig565:12144..16810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score748.4
Seed ortholog evalue2.2e-213
Seed eggNOG ortholog2880.D7FSY1
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Domain of unknown function (DUF4336)
EggNOG OGs2BYI5@1,2QU5X@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF4336
Ec32 orthologEc-27_006780.1
Exons7
Model size1660
Cds size1590
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig565.13991.1prot_L-elsbetiae_contig565.13991.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig565 12144..16740 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816600.8820016-CDS-L-elsbetiae_contig565:12143..125271622816600.8820016-CDS-L-elsbetiae_contig565:12143..12527Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 12144..12527 -
1691683676.5308332-CDS-L-elsbetiae_contig565:12143..125271691683676.5308332-CDS-L-elsbetiae_contig565:12143..12527Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 12144..12527 -
1622816600.8937702-CDS-L-elsbetiae_contig565:13272..133471622816600.8937702-CDS-L-elsbetiae_contig565:13272..13347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 13273..13347 -
1691683676.5460818-CDS-L-elsbetiae_contig565:13272..133471691683676.5460818-CDS-L-elsbetiae_contig565:13272..13347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 13273..13347 -
1622816600.9080486-CDS-L-elsbetiae_contig565:13781..138711622816600.9080486-CDS-L-elsbetiae_contig565:13781..13871Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 13782..13871 -
1691683676.562451-CDS-L-elsbetiae_contig565:13781..138711691683676.562451-CDS-L-elsbetiae_contig565:13781..13871Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 13782..13871 -
1622816600.9220216-CDS-L-elsbetiae_contig565:14191..143621622816600.9220216-CDS-L-elsbetiae_contig565:14191..14362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 14192..14362 -
1691683676.5766327-CDS-L-elsbetiae_contig565:14191..143621691683676.5766327-CDS-L-elsbetiae_contig565:14191..14362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 14192..14362 -
1622816600.9362803-CDS-L-elsbetiae_contig565:14840..150151622816600.9362803-CDS-L-elsbetiae_contig565:14840..15015Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 14841..15015 -
1691683676.5861447-CDS-L-elsbetiae_contig565:14840..150151691683676.5861447-CDS-L-elsbetiae_contig565:14840..15015Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 14841..15015 -
1622816600.9481742-CDS-L-elsbetiae_contig565:15278..155591622816600.9481742-CDS-L-elsbetiae_contig565:15278..15559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 15279..15559 -
1691683676.5956068-CDS-L-elsbetiae_contig565:15278..155591691683676.5956068-CDS-L-elsbetiae_contig565:15278..15559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 15279..15559 -
1622816600.9624608-CDS-L-elsbetiae_contig565:16326..167401622816600.9624608-CDS-L-elsbetiae_contig565:16326..16740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 16327..16740 -
1691683676.606-CDS-L-elsbetiae_contig565:16326..167401691683676.606-CDS-L-elsbetiae_contig565:16326..16740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig565 16327..16740 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816600.9741905-UTR-L-elsbetiae_contig565:16740..168101622816600.9741905-UTR-L-elsbetiae_contig565:16740..16810Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig565 16741..16810 -
1691683676.61505-UTR-L-elsbetiae_contig565:16740..168101691683676.61505-UTR-L-elsbetiae_contig565:16740..16810Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig565 16741..16810 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig565.13991.1

>prot_L-elsbetiae_contig565.13991.1 ID=prot_L-elsbetiae_contig565.13991.1|Name=mRNA_L-elsbetiae_contig565.13991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=530bp
MVKLTIASLYVLVAAQLDLSRALLTSTSFVQKHVNNNLVVTHPRNPPAAP
RISWIPGGGTASSGTWCDQFKREPSSRRYLHPERTRHRLSMTASPARAEK
RSAPLGGSRSVNWPLWYVLPIAPYQRRKTLMKEIVPGQVWTFDQLQGILY
VIVPVRMTVIKLEKSEGGGLFVYAPVAPTAECLAMMRGLEAEHGPVRHIV
LGTLGLEHKVFAGPFAQRFSQARVWFTPGQYSFPIGLPLSWLGFGGRPTK
EIPASSADAPWSADLDHEVLGPFFSKDGSGGYGETAFFHKATKTLLVTDM
VVKVEDEVPEIVCEDPRPLLFHARDDALERVEDTPEVRLKGWRRIVQFAL
TFQPSSLVVVELKKALFDDAPQSKMKELGWGGLFPFEWARSDNDLKSFSA
MKGGLLVAPILQVLLLNRDPEPVLDWADRVAKWPFRRVIPCHLANDVATT
PKEFRKAFRFLEKDGGGGRGGAAGGLASLFGGGGGGGGGGGKGAQPLAED
LQFLRDAEETLVGLGTLFPAAGLVDRSRR*
back to top

mRNA from alignment at L-elsbetiae_contig565:12144..16810-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig565.13991.1 ID=mRNA_L-elsbetiae_contig565.13991.1|Name=mRNA_L-elsbetiae_contig565.13991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4667bp|location=Sequence derived from alignment at L-elsbetiae_contig565:12144..16810- (Laminarionema elsbetiae ELsaHSoW15)
GGTCTCTGTGTGTATGCGACAGTAGCAGAGCTGAAGAGGGTGGTTGGCGC ACCCGAAGTTCACTGTGAACATGGTGAAATTGACCATCGCGAGCTTGTAT GTCCTCGTCGCAGCTCAGCTCGATCTCTCGAGAGCCCTTTTGACGAGTAC GAGTTTTGTTCAAAAACACGTCAACAACAACCTTGTCGTGACACACCCGA GAAATCCACCTGCAGCACCGAGAATATCATGGATACCGGGAGGTGGTACT GCTTCAAGCGGGACGTGGTGTGACCAGTTCAAGAGAGAGCCGAGTAGCAG GAGGTACCTGCATCCAGAGAGAACGCGTCACAGACTATCGATGACGGCGT CTCCAGCGAGAGCAGAGAAGAGGTCTGCTCCGCTTGGTGGTAGCAGGAGC GTCAACTGGCCGCTGTGGTACGTCCTTCCCATCGCACCATATCAGAGAAG GAAGACGCTTATGAAGGAGATTGTGCCTGGCCAGGTGAGATTAGGATCAG CACGAAGCGACTGCTGTTCAACCAAATTACTCCGTGAGAACGGCCTCGTA GTATCACGCCGCTAATACATGTTGGACGCCGCCGCCAACGCGATACATAT ATCATACGTGCTGTGGTGCGTTTCTCTCGCTATTTGTCCTGCCACACGGG AAGCGTGGGAAGCGTTCAGCTAACTGTGGCGGTACTTGCATCTAGTCGCC AAAATTGGGTACGCTGCTGTAGGGACTCTCGTAAATATAGATATGCACAG CGAGGGAGAAAGAGAAAGATCAAGAGGCCGGCGCACACGTCAACATGCAG GACATATCATCAGCATGGTACTGACCGTAGCTTTGGGGCACGTAGGCGGA ACTTCGTCACGGCAGCCATAAACAGCACACTTTCGAACCTGACATGTGTT TAGTTCCAGCAGTGTCGGCAACAAGCCCTCGTCCGTGAGGTCTCTGCGTG TACAAGGGGGTTCAAACCCTCTCTGATGCGCTCGACTACGTACCTCACGC GAGTGTTCCTACCATCCGCGACCCCAACCCCTCTTGTCTTCCCCGTCAAT CAGCAATTACCAAGCGACTTTTGACGCTCGTTCTGGTGTCCCTATCTAAA TTCTTGTTCTCTATTTACAACACACATGGACCGCCCCCCAAACCGCCAGC AGGCAGCAGTCACCCCAAGATTTTTGACGCTCGTTCTGATGTCTCTCAAA AACCTGGGGTCTCTACATACACGAATCGCCCCCCCCCCCCCTAACAAAAA GGTGTGGACCTTCGACCAGCTGCAGGGGATTTTGTACGTCATCGTGCCCG TCCGCATGACGGTCATCAAGCTAGAAAAGTCGGAGGGGGGTGGGCTGTTC GTCTACGCCCCCGTGGCCCCGACGGCCGAGTGCCTGGCGATGATGCGCGG GCTAGAGGCCGAACACGGCCCCGTCCGGCACATCGTGCTGGGCACGCTGG GGCTGGAGCACAAGGTGTTTGCGGGGCCGTTCGCGCAGAGATTCTCCCAG GCGCGAGTCTGGTTTACTCCTGGACAGTACAGGTGCGTTTTTATTTTTTG CCTTGTGTGACTGTCTTGTAATCGCTGTGGCAAGGCTTTCTCTGGTGCCA CCACTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTACCGCCGCCGCCGAA GCCGCAGCAAGGATTTCACGCAGTCAAGCTGGTGGCCGTTGGCTAGGTGA CGGGAGGCAGCTATTTGTCTAGCTCAAAAGACTGCCCCCTCCCCTCCCTT GCTTGCCGATTTGGGTGCACACCTTGTATGCACTCTGCTCGACAGTTTCC CGATTGGCCTGCCGTTGTCGTGGCTGGGCTTCGGGGGGCGGCCTACCAAA GAAATCCCCGCCTCGTCTGCGGATGCCCCTTGGAGCGCCGACCTGGACCA CGAGGTGCTTGGACCCTTTTTCTCAAAGGACGGCTCGGGGGGCTACGGGG AGACGGCCTTCTTCCACAAGGTACCTACCTACGACCTGTGCGTCCGGCGA GTTTTCCCTTGCGTGAGCAATGTTTGTAGAGCACAAGGCAACAACAGTGT CCATGGTGACACAGTAGAGAGGTCTTGCGTGCCTTTGTTTTTTATCACCT ACGAACGTAGCTATGTACAGCCCCGTCTGCCGCGTGATACTCGCGCTAAA TTGTGCGCCTGTCGTGAACAAATGGCGAGCCTCTCGGCGCTTACATCACA AGACGGCCCAAACGTGGGAGAATGGACGTACGGTCTGATGCGGACGCCGT CTCACGTTCGTAAACCCTGTGGCATTCAACCCAACAAAAGATGTATCCCG TTTGCCAGTCAGGCAGGCAGTTGCATCGTATCTATTTCGGCATACCACGA CAAGCGTTGCAAAAGAGCCCAGCCTCTCTTGTCGATGTGGAGAGGGGCAC GGTACAGCACGGTTGGTTACATCGCGCCACATTTCCTCTGCTCGGCAGGC GACCAAGACGCTGCTCGTGACGGATATGGTGGTGAAGGTCGAGGACGAAG TGCCGGAGATCGTGTGCGAAGACCCCCGACCCCTCCTGTTCCACGCCAGA GACGACGCCCTCGAAAGGGTCGAGGACACCCCCGAAGTTCGCCTCAAAGG GTGGAGAAGAATAGTACAGGTGGGTGCGTGGGTAGGTACACAGCGCTCAC ACCTTCCGTTCCCTACCACTGCTGTCACTTGGTTCGCGGTGAGTCTGCGG CAGGTCCTGCACGATCAATATGTTTCAGTCCAAAAAGCCTCGGAAAGAGC CATTTTTTTATTTTGGGGGGGAAGATCAGCTGCGCATCTACTCCCCCGTA CGTCGTGTATATCACAGGCGGCATGGCACCCACCCACCCCAAAAGAAAAA CCCACCGCTCCGCTGTTGGTGAGTACCCTCCCTCCCTCCCTCCCTCACGC ACCCCGCCCAACCCGCCTCTGTCTGGGTGCGTACCACAGTTCGCCCTGAC GTTTCAGCCGAGTAGCCTGGTCGTGGTGGAGCTGAAGAAGGCGCTGTTCG ACGACGCGCCGCAGTCCAAAATGAAGGAGGTGAGATGTGAATGGACAAAT CTAGGTATATACGCGCGTGTGTTTGTACCACCGTCGTGTGCCTTTTTGAC GGTGTATACGTTTATGTACGACCTATGCATGCCTGACACCTGACCCCCCT CCTCTCCACGTGTGTTTCTTGTTCTTGAGGGGCGCGCTCGTGGAAGTCGG GATCCACTAGTGTGCATTACGTTGGCCAGGGGAAGGGCACACCCACTAGA TAGAACGGTCCTCGTGACTCATCCACGGAGACTTGCGGTATGTACGATTT CTCCCCACGAAGACAGCAAACAGTACGTGATGTGCATCGACCGTACATGG AGTGCACGGGAGGACAGCTGACACCGGTGTGTCGGGTTCGCAACGGGCTC ACCTCCGTCTTGGATCGCTCCATTCATTCCCTGCGCCCCTCTCTTTTGCC CCGTTTTTGTCAGCTGGGCTGGGGCGGGCTATTTCCGTTCGAGTGGGCTA GGTCAGACAACGACTTGAAGTCCTTCTCTGCCATGAAGGTGAGTGAGGTA CATTGGCGCCTCGCTGCACTGCACCGCACCACACCGGCATGTCTGATCCG ATTGCTCAACAAGCCTATCGGGCGGGGACTCTACGCCTTGCTATAACGTA GAATACGCATCCCCGCGCCGTTGTAAATTCGATGTTGGTTATTGTATGTA CATGTACACAACGTATGGTGCTGTGCCCCCACTGACCGTAGCTGGCGACT CCAGTGATTGCTCGGGCGCTCGTGCCGGGGGAAACGAGACGCGTGCCCGA TAGATACCAAAGCCTTACCGTGGCCGTTCGACCCTTTTTGGCAAAAGCAG TGTCCCGCTTCCTTTTCGCACAGACTTTTCAATACAGGTTGCACGGTGGT ATAGGCTTTTGCAGCAGCAGGGCCCCCATTTCGGAAAAAGTGGCAGTGGG GATTTTTTCACTCTATTTCCTAGATAAATACCCCCTACAGCTCTTTTTTA GAATCGGGGGCTCTCTCGCAGGAAGCCTAGGGGGGTTTCCATTCATTATT CGCGCTGAGTGCACCCCATCCCGGTCCGGTCCGTACCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCGGGGCCCCCCCGGGGGCCCCCCCCCCCCCG CGCCCTCTCCCCGCCCCAGACCCCNNNNNNNNNNGGAAGGCTAGGGGGGT TTCCATTCATTATTCGCCCTTGGGGCCCCCCACCCCGGTCCGGTCCGCAC CCCCCCCCCCCCCCCAAACCTCACATCGTTCAGGGCGGTCTGCTGGTGGC GCCCATCTTGCAAGTGCTTTTGCTCAACAGAGACCCTGAGCCGGTTCTGG ACTGGGCCGACAGAGTAGCCAAGTGGCCCTTCCGCCGTGTCATCCCCTGC CATCTGGCGAACGATGTCGCGACAACACCGAAGGAGTTCCGAAAGGCGTT TCGCTTCTTGGAAAAAGACGGCGGCGGGGGAAGGGGGGGCGCAGCTGGGG GGCTCGCTTCGCTGTTCGGGGGAGGAGGAGGAGGCGGTGGGGGGGGGGGC AAGGGGGCCCAGCCGCTCGCGGAGGACTTGCAGTTTTTGAGGGATGCTGA GGAGACGTTGGTTGGTCTTGGCACCCTGTTCCCGGCGGCCGGGCTGGTCG ACCGGTCTCGACGATGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig565:12144..16810-

>mRNA_L-elsbetiae_contig565.13991.1 ID=mRNA_L-elsbetiae_contig565.13991.1|Name=mRNA_L-elsbetiae_contig565.13991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3180bp|location=Sequence derived from alignment at L-elsbetiae_contig565:12144..16810- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGAAATTGACCATCGCGAGCTTGTATGTCCTCGTCGCAGCTCAGCT
CGATCTCTCGAGAGCCCTTTTGACGAGTACGAGTTTTGTTCAAAAACACG
TCAACAACAACCTTGTCGTGACACACCCGAGAAATCCACCTGCAGCACCG
AGAATATCATGGATACCGGGAGGTGGTACTGCTTCAAGCGGGACGTGGTG
TGACCAGTTCAAGAGAGAGCCGAGTAGCAGGAGGTACCTGCATCCAGAGA
GAACGCGTCACAGACTATCGATGACGGCGTCTCCAGCGAGAGCAGAGAAG
AGGTCTGCTCCGCTTGGTGGTAGCAGGAGCGTCAACTGGCCGCTGTGGTA
CGTCCTTCCCATCGCACCATATCAGAGAAGGAAGACGCTTATGAAGGAGA
TTGTGCCTGGCCAGATGGTGAAATTGACCATCGCGAGCTTGTATGTCCTC
GTCGCAGCTCAGCTCGATCTCTCGAGAGCCCTTTTGACGAGTACGAGTTT
TGTTCAAAAACACGTCAACAACAACCTTGTCGTGACACACCCGAGAAATC
CACCTGCAGCACCGAGAATATCATGGATACCGGGAGGTGGTACTGCTTCA
AGCGGGACGTGGTGTGACCAGTTCAAGAGAGAGCCGAGTAGCAGGAGGTA
CCTGCATCCAGAGAGAACGCGTCACAGACTATCGATGACGGCGTCTCCAG
CGAGAGCAGAGAAGAGGTCTGCTCCGCTTGGTGGTAGCAGGAGCGTCAAC
TGGCCGCTGTGGTACGTCCTTCCCATCGCACCATATCAGAGAAGGAAGAC
GCTTATGAAGGAGATTGTGCCTGGCCAGGTGTGGACCTTCGACCAGCTGC
AGGGGATTTTGTACGTCATCGTGCCCGTCCGCATGACGGTCATCAAGCTA
GAAAAGTCGGAGGGGGGTGGGCTGTTCGTCTACGCCCCCGTGGCCCCGAC
GGCCGAGTGCCTGGCGATGATGCGCGGGCTAGAGGCCGAACACGGCCCCG
TCCGGCACATCGTGCTGGGCACGCTGGGGCTGGAGCACAAGGTGTTTGCG
GGGCCGTTCGCGCAGAGATTCTCCCAGGCGCGAGTCTGGTTTACTCCTGG
ACAGTACAGGTGTGGACCTTCGACCAGCTGCAGGGGATTTTGTACGTCAT
CGTGCCCGTCCGCATGACGGTCATCAAGCTAGAAAAGTCGGAGGGGGGTG
GGCTGTTCGTCTACGCCCCCGTGGCCCCGACGGCCGAGTGCCTGGCGATG
ATGCGCGGGCTAGAGGCCGAACACGGCCCCGTCCGGCACATCGTGCTGGG
CACGCTGGGGCTGGAGCACAAGGTGTTTGCGGGGCCGTTCGCGCAGAGAT
TCTCCCAGGCGCGAGTCTGGTTTACTCCTGGACAGTACAGTTTCCCGATT
GGCCTGCCGTTGTCGTGGCTGGGCTTCGGGGGGCGGCCTACCAAAGAAAT
CCCCGCCTCGTCTGCGGATGCCCCTTGGAGCGCCGACCTGGACCACGAGG
TGCTTGGACCCTTTTTCTCAAAGGACGGCTCGGGGGGCTACGGGGAGACG
GCCTTCTTCCACAAGTTTCCCGATTGGCCTGCCGTTGTCGTGGCTGGGCT
TCGGGGGGCGGCCTACCAAAGAAATCCCCGCCTCGTCTGCGGATGCCCCT
TGGAGCGCCGACCTGGACCACGAGGTGCTTGGACCCTTTTTCTCAAAGGA
CGGCTCGGGGGGCTACGGGGAGACGGCCTTCTTCCACAAGGCGACCAAGA
CGCTGCTCGTGACGGATATGGTGGTGAAGGTCGAGGACGAAGTGCCGGAG
ATCGTGTGCGAAGACCCCCGACCCCTCCTGTTCCACGCCAGAGACGACGC
CCTCGAAAGGGTCGAGGACACCCCCGAAGTTCGCCTCAAAGGGTGGAGAA
GAATAGTACAGGCGACCAAGACGCTGCTCGTGACGGATATGGTGGTGAAG
GTCGAGGACGAAGTGCCGGAGATCGTGTGCGAAGACCCCCGACCCCTCCT
GTTCCACGCCAGAGACGACGCCCTCGAAAGGGTCGAGGACACCCCCGAAG
TTCGCCTCAAAGGGTGGAGAAGAATAGTACAGTTCGCCCTGACGTTTCAG
CCGAGTAGCCTGGTCGTGGTGGAGCTGAAGAAGGCGCTGTTCGACGACGC
GCCGCAGTCCAAAATGAAGGAGTTCGCCCTGACGTTTCAGCCGAGTAGCC
TGGTCGTGGTGGAGCTGAAGAAGGCGCTGTTCGACGACGCGCCGCAGTCC
AAAATGAAGGAGCTGGGCTGGGGCGGGCTATTTCCGTTCGAGTGGGCTAG
GTCAGACAACGACTTGAAGTCCTTCTCTGCCATGAAGCTGGGCTGGGGCG
GGCTATTTCCGTTCGAGTGGGCTAGGTCAGACAACGACTTGAAGTCCTTC
TCTGCCATGAAGGGCGGTCTGCTGGTGGCGCCCATCTTGCAAGTGCTTTT
GCTCAACAGAGACCCTGAGCCGGTTCTGGACTGGGCCGACAGAGTAGCCA
AGTGGCCCTTCCGCCGTGTCATCCCCTGCCATCTGGCGAACGATGTCGCG
ACAACACCGAAGGAGTTCCGAAAGGCGTTTCGCTTCTTGGAAAAAGACGG
CGGCGGGGGAAGGGGGGGCGCAGCTGGGGGGCTCGCTTCGCTGTTCGGGG
GAGGAGGAGGAGGCGGTGGGGGGGGGGGCAAGGGGGCCCAGCCGCTCGCG
GAGGACTTGCAGTTTTTGAGGGATGCTGAGGAGACGTTGGTTGGTCTTGG
CACCCTGTTCCCGGCGGCCGGGCTGGTCGACCGGTCTCGACGATGAGGCG
GTCTGCTGGTGGCGCCCATCTTGCAAGTGCTTTTGCTCAACAGAGACCCT
GAGCCGGTTCTGGACTGGGCCGACAGAGTAGCCAAGTGGCCCTTCCGCCG
TGTCATCCCCTGCCATCTGGCGAACGATGTCGCGACAACACCGAAGGAGT
TCCGAAAGGCGTTTCGCTTCTTGGAAAAAGACGGCGGCGGGGGAAGGGGG
GGCGCAGCTGGGGGGCTCGCTTCGCTGTTCGGGGGAGGAGGAGGAGGCGG
TGGGGGGGGGGGCAAGGGGGCCCAGCCGCTCGCGGAGGACTTGCAGTTTT
TGAGGGATGCTGAGGAGACGTTGGTTGGTCTTGGCACCCTGTTCCCGGCG
GCCGGGCTGGTCGACCGGTCTCGACGATGA
back to top