Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 374 |
Cds size | 195 |
Stop | 1 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816600.1714666-CDS-L-elsbetiae_contig5640:43..238 | 1622816600.1714666-CDS-L-elsbetiae_contig5640:43..238 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5640 44..238 + |
1691683676.021844-CDS-L-elsbetiae_contig5640:43..238 | 1691683676.021844-CDS-L-elsbetiae_contig5640:43..238 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5640 44..238 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816600.18636-UTR-L-elsbetiae_contig5640:238..417 | 1622816600.18636-UTR-L-elsbetiae_contig5640:238..417 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5640 239..417 + |
1691683676.0326583-UTR-L-elsbetiae_contig5640:238..417 | 1691683676.0326583-UTR-L-elsbetiae_contig5640:238..417 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5640 239..417 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5640.13984.1 >prot_L-elsbetiae_contig5640.13984.1 ID=prot_L-elsbetiae_contig5640.13984.1|Name=mRNA_L-elsbetiae_contig5640.13984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=65bp
YLISGGAHYVTQFRLQGKLFKYDCTKGGRTACIGGGTFFDQGWYSRKQVL YVYVRTGLLSSGWG* back to topmRNA from alignment at L-elsbetiae_contig5640:44..417+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5640.13984.1 ID=mRNA_L-elsbetiae_contig5640.13984.1|Name=mRNA_L-elsbetiae_contig5640.13984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=374bp|location=Sequence derived from alignment at L-elsbetiae_contig5640:44..417+ (Laminarionema elsbetiae ELsaHSoW15) TATCTCATCTCGGGGGGCGCTCACTACGTCACACAGTTCCGTCTGCAGGG
GAAGTTGTTCAAGTATGATTGTACTAAAGGCGGTCGCACTGCTTGTATCG
GGGGTGGCACTTTCTTCGATCAAGGTTGGTACTCCAGAAAACAGGTCCTG
TACGTGTATGTGAGGACGGGCCTTCTATCTAGTGGTTGGGGATAGAACGA
GAACCTAGCAGGAACTTGCCGGGCAACGACTCAGGTTTCAGCGCTACATA
TACAATGCTTAATTATATTTCGCCGCGCCTTGGGGAGTCGTGGCTGGGGA
TAGTACGGGAGAACCTAGCGGGAACTTGCCGGGCAACGGCTCAGGTCTCG
GCGCTGCCTACCTGTGGGCCCTTG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5640:44..417+ >mRNA_L-elsbetiae_contig5640.13984.1 ID=mRNA_L-elsbetiae_contig5640.13984.1|Name=mRNA_L-elsbetiae_contig5640.13984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=390bp|location=Sequence derived from alignment at L-elsbetiae_contig5640:44..417+ (Laminarionema elsbetiae ELsaHSoW15) TATCTCATCTCGGGGGGCGCTCACTACGTCACACAGTTCCGTCTGCAGGG GAAGTTGTTCAAGTATGATTGTACTAAAGGCGGTCGCACTGCTTGTATCG GGGGTGGCACTTTCTTCGATCAAGGTTGGTACTCCAGAAAACAGGTCCTG TACGTGTATGTGAGGACGGGCCTTCTATCTAGTGGTTGGGGATAGTATCT CATCTCGGGGGGCGCTCACTACGTCACACAGTTCCGTCTGCAGGGGAAGT TGTTCAAGTATGATTGTACTAAAGGCGGTCGCACTGCTTGTATCGGGGGT GGCACTTTCTTCGATCAAGGTTGGTACTCCAGAAAACAGGTCCTGTACGT GTATGTGAGGACGGGCCTTCTATCTAGTGGTTGGGGATAG back to top
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