mRNA_L-elsbetiae_contig5620.13959.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5620.13959.1
Unique NamemRNA_L-elsbetiae_contig5620.13959.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Match: D7FNU8_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU8_ECTSI)

HSP 1 Score: 467 bits (1201), Expect = 1.560e-151
Identity = 243/293 (82.94%), Postives = 258/293 (88.05%), Query Frame = 1 
Query:   28 KVRETMTAAIELSADGFLQQINEYECIRDLGNGATAEVKLCRRVDKQTGQEEWVAVKVFNKSLLNRQARGFAFGRRKKKKDHKRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEESTGQYVSPATGGVLPPKAAASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDEQQEPPTP-------PPSSDGSPSPAVTENSAERHRHQLTQPEGTWCFWAPEICTTSTVANDRARQAAATRARGAEAAKAMALGIG 885
            +VRETMTAAIELSADGFLQQINEYECIRDLG+GATAEVKLCRRVD QTG+EEWVAVKVFNKSLLNRQARGFAFGRRKK  D KRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDP+NDLLFMAMEFV  G VMVW+E+TGQY+SPATGGVLPPK AA YFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDEQ+ PP             +   + AVT  SA+RHRHQLTQPEGTWCFWAPEICT+ST AN+RA  AA  RA+GAEAAKA+ALG G
Sbjct:    3 QVRETMTAAIELSADGFLQQINEYECIRDLGSGATAEVKLCRRVDNQTGEEEWVAVKVFNKSLLNRQARGFAFGRRKK--DSKRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDPKNDLLFMAMEFVHNGPVMVWDEATGQYLSPATGGVLPPKTAAVYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDEQEIPPAAGGXXXXXXXXGESPSTAAVTAESAQRHRHQLTQPEGTWCFWAPEICTSSTAANERALMAAEARAKGAEAAKALALGSG 293
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BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Match: A0A6H5JFG3_9PHAE (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG3_9PHAE)

HSP 1 Score: 427 bits (1098), Expect = 1.590e-135
Identity = 225/281 (80.07%), Postives = 236/281 (83.99%), Query Frame = 1 
Query:   43 MTAAIELSADGFLQQINEYECIRDLGNGATAEVKLCRRVDKQTGQEEWVAVKVFNKSLLNRQARGFAFGRRKKKKDHKRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEESTGQYVSPATGGVLPPKAAASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDEQQEPPTPPPSSDGSPSPAVTENSAERHRHQLTQPEGTWCFWAPEICTTSTVANDRARQAAATRARGAEAAKAMALGIG 885
            MTAAIELSADGFLQQINEYECIRDLG+GATAEVKLCRRVDKQTG+EEWVAVKVFNKSL+NRQARGFAFGRRKK  D KRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDP+NDLLFMAMEFV  G VMVW+E+TGQY+SPATGGVLPPK AA YFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQV                               HQLTQPEGTWCFWAPEICT+ST AN+RA  AA  RA+GAEAAKA+ALG G
Sbjct:    1 MTAAIELSADGFLQQINEYECIRDLGSGATAEVKLCRRVDKQTGEEEWVAVKVFNKSLINRQARGFAFGRRKK--DPKRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDPKNDLLFMAMEFVHNGPVMVWDEATGQYLSPATGGVLPPKTAAVYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQV-------------------------------HQLTQPEGTWCFWAPEICTSSTAANERALMAAEARAKGAEAAKALALGSG 248
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BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Match: A0A7S2RI55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RI55_9STRA)

HSP 1 Score: 173 bits (438), Expect = 4.520e-47
Identity = 106/266 (39.85%), Postives = 148/266 (55.64%), Query Frame = 1 
Query:   28 KVRETMTAAIELSADGFLQQINEYECIRDLGNGATAEVKLCRRVDKQTGQEEWVAVKVFNKSLLNRQARGFAFGRRKKKKDHKRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEESTGQYVSP-----------ATGGVLPPKAAASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDEQQEPPTPPPSSDGSPSPAVTENSAERHRH-QLTQPEGTWCFWAPEIC 789
            +++ET  + +     G +  +NEY  I  +G G+TA   LC R   + G+    A+KVF KS+L+R+ R  + G R     +   S  L  V RE+A+MKKL H N+VRL EVIDD   D +FM +EFV+ G ++ W     ++  P           A   +   + AA+Y   +L GL+FLH NH+ HRDLKPENVL+T DG AK+ADFGVA  F ++++ P  P             N A  H   QLT+ EGT+ FWAPE+C
Sbjct:   43 RMKETHHSKVNRDKHGEVTDVNEYHIIELIGTGSTASAYLCER---RGGEHSRFALKVFEKSMLSRR-RTMSRGER----GNMIVSSALDQVSREIAVMKKLEHINLVRLFEVIDDENEDQMFMVLEFVEGGTILDWNPEEERFNLPVSQLKGPKRSGAASAMYAEEEAAAYTVDILRGLKFLHQNHIAHRDLKPENVLITGDGHAKIADFGVAHYFQDEEDKPLRP-------------NLARSHSQGQLTKTEGTYYFWAPEMC 287
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BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Match: A0A7R9U356_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U356_9STRA)

HSP 1 Score: 175 bits (443), Expect = 4.710e-47
Identity = 104/262 (39.69%), Postives = 149/262 (56.87%), Query Frame = 1 
Query:   13 STALPKVRETMTAAIELSADGFLQQINEYECIRDLGNGATAEVKLCRRVDKQTGQEEWVAVKVFNKSLLNRQARGFAFGRRKKKKDHKRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEESTGQYVSPATGGVLPPKAAASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDEQQEPPTPPPSSDGSPSPAVTENSAERHRHQLTQPEGTWCFWAPEICTTS 798
            S +  +V ET  A + L  +G L+ INEY  +R + +G+ + V    R ++  G   + A KV +KSLL R+      GR+   K        L NV REVALMKKL HP +V L+EVIDD ++DL+ M ME +  G +M + +   ++V   T G LP + AA   + +L G+ +LH NHV HRDLKPEN+L + DG  K++DFGV+  F+E+      P          +     +  R QLT+ EGTW FWAPE+CT++
Sbjct:   57 SASASRVEETSQAIVSLDNNGVLESINEYVVVRHIADGSFSNVYEVERNEEGVGPVRYAA-KVMHKSLLRRRRNIERKGRKTVVKT------ALDNVAREVALMKKLEHPCIVDLVEVIDDVESDLIVMIMELMGNGPIMDYSDQEQRFVYQPTQGTLPEEDAAWTIKAVLLGIGYLHQNHVAHRDLKPENILRSSDGRVKISDFGVSHFFEEETAKERRP----------LRTLIRQESRGQLTKTEGTWAFWAPEMCTST 301
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BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Match: A0A7S4E3P3_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3P3_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.980e-44
Identity = 104/259 (40.15%), Postives = 143/259 (55.21%), Query Frame = 1 
Query:   34 RETMTAAIELSADGFLQQINEYECIRDLGNGATAEVKLCRRVDKQTGQEEWVAVKVFNKSLLNRQ------ARGFAFGRRKKKKDHKRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEESTGQYVSPATGGVLPPKAAASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDEQQEPPTPPPSSDGSPSPAVTENSAERH--RHQLTQPEGTWCFWAPEI 786
            +E     I  S  G +++I +Y  +  LG G+ AEV L     K    E + A KVF+KSLL R+        GF        K H      L  V +E+ +MKKLVHPN+VRLLEVIDD +++ LF+ MEFV+ G VM ++  T ++ S  TGG+   + A  Y   +  GL +LH +H+ HRDLKP+NVLL K G  K+ADFGVA  F+E           D +    ++  S ER   R Q+   +GT+CFWAPE+
Sbjct:    4 KEKEARPIRSSESGTVRRIKQYTLLTRLGQGSFAEVFLA----KSDVDETYCAAKVFDKSLLRRKRTISRTVEGF--------KIHSE----LDKVDKEIGIMKKLVHPNLVRLLEVIDDKKDNQLFLLMEFVELGPVMKYDRETNKFTSTVTGGLCEERLAGQYLLDIASGLGYLHLHHIAHRDLKPDNVLLGKLGRCKIADFGVAHYFEE-----------DHANDKTLSVRSLERSHSRAQIRDTQGTYCFWAPEM 235
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BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Match: A0A835ZD22_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD22_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.420e-43
Identity = 91/205 (44.39%), Postives = 126/205 (61.46%), Query Frame = 1 
Query:   73 GFLQQINEYECIRDLGNGATAEVKLCRRVDKQTGQEEWVAVKVFNKSLLNRQARGFAFGRRKKK------------KDHKRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEESTGQYVSPATGGVLPPKAAASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDE 651
            GF++++NEYE +++LG G   +V LCRRV    G  E V +K F+KSLL RQ+R  AF  +++             + H   S  ++ VRREVA++KK+ HP++ RLL+VIDDP  D +F+AME+V    VMVW+     Y SP TGG L    AA +   +L GL +LH   VVHRDLKPEN+L++  G  K+ADFG+     E
Sbjct:   51 GFVRRVNEYEFVKELGRGVGGDVLLCRRVGGG-GDGELVVIKAFDKSLLRRQSREEAFRSQRRLVRAGAPRRGLPVRAHTATSARMEAVRREVAILKKVCHPHITRLLDVIDDPSLDTIFVAMEYVGGSTVMVWDADHQMYRSPVTGGPLTSVMAARFTSDLLSGLAYLHLQRVVHRDLKPENILVSSQGRVKIADFGLGHFMGE 254
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BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Match: F0YAL4_AURAN (Eukaryotic translation initiation factor 3 subunit G n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAL4_AURAN)

HSP 1 Score: 159 bits (402), Expect = 1.570e-40
Identity = 100/239 (41.84%), Postives = 136/239 (56.90%), Query Frame = 1 
Query:   70 DGFLQQINEYECIRDLGNGATAEVKLCRRVDKQTGQEEWVAVKVFNKSLLNRQARGFAFGRRKKKKDHKRDSQVLQNVRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEESTGQYVSPATGGVLPPKAAASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDEQQEPPTPPPSSDGSPSPAVTENSAERHRHQLTQPEGTWCFWAPEI 786
            DG ++QIN+Y   + LG G+ AEV L +  D        VA KVFNKSLL R+ R  A     +  D  + +  L  V+ E+A+MKKL H  +VRL EV+DD + D L+M ME V++G VMV + ST  + + ATGG      AA+Y   +  GL +LH + + HRDLKP+NVLL  DG  K+ADFGVA VFDEQ           G P  ++          Q  + +GT+ FW+PE+
Sbjct:   14 DGSVRQINQYTLEKKLGRGSFAEVYLAKSADLAAP----VACKVFNKSLLRRK-RTMA-----RTADGVKVTTELDKVQTEIAIMKKLEHNRLVRLYEVVDDDECDALYMFMEHVEKGPVMVHDPSTNTFAAAATGGPCGGPLAAAYLLDVASGLGYLHLHGIAHRDLKPDNVLLGHDGFCKIADFGVAHVFDEQPA---------GEPQKSLWSLERSHSVAQTGETQGTYSFWSPEM 233
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BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Match: A0A485KAP4_9STRA (Aste57867_2731 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAP4_9STRA)

HSP 1 Score: 151 bits (382), Expect = 6.520e-39
Identity = 105/271 (38.75%), Postives = 147/271 (54.24%), Query Frame = 1 
Query:    4 ARVSTALPKVRETMTAAIELSADGFLQQINEYECIRDLGNGATAEVKLCRRV----DKQTGQEEWVAVKVFNKSLLNRQARGFAFGRRKKKKDHKR-DSQVLQNVRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEESTGQYVSPATGGVLPPKA--AASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDEQQEPPTPPPSSDGSPSPAVTENSAERHRHQLTQPEGTWCFWAPEICTT 795
            AR  ++  +V ET  AA+++   G    +N+Y  ++ LG GA A+V LC R     DK T Q    A+KVFNKS L R+       R  KK D K   +   Q V++E+A+MKKL HPN+ +L+EVID P +D +F+ +E +  GAVM ++  T +Y  P  G V   +     +    M   L++LH NH+ HRD+KPENVL++ +G  KL DFGVA +F                     TE+ A  +  QL   EGT+ F APE CTT
Sbjct:   31 ARTPSSGCQVVETEVAAVKVDDSGAPHHVNDYTVLKQLGEGAFAKVYLCERTTNASDKTTKQ---YAMKVFNKSFLKRK-------REFKKVDGKMVQTNAFQKVQKEIAIMKKLCHPNLTKLIEVIDSPDDDKMFLVLELIGGGAVMEFDAKTLRYTYPEEGMVEADRLLMVQNCLLDMALALDYLHANHICHRDIKPENVLVSDNGFYKLGDFGVAYMF---------------------TEDDAT-NALQLKSTEGTYHFLAPE-CTT 268
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BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Match: W2LM61_PHYPR (Serine/threonine protein kinase n=9 Tax=Phytophthora TaxID=4783 RepID=W2LM61_PHYPR)

HSP 1 Score: 151 bits (382), Expect = 3.180e-38
Identity = 98/262 (37.40%), Postives = 148/262 (56.49%), Query Frame = 1 
Query:   31 VRETMTAAIELSADGFLQQINEYECIRDLGNGATAEVKLCRRVDKQTGQEEWVAVKVFNKSLLNRQARGFAFGRRKKKKDHKRD------SQVLQNVRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEESTGQYVSP-ATGGVLPPKAAASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVFDEQQEPPTPPPSSDGSPSPAVTENSAERHRHQLTQPEGTWCFWAPEICTT 795
            V ET TA ++++++G    +N Y+ +  LG G  ++V LC+     TG E   A+K+ NKS+L            K+K+++KR       S   Q V++EVA+MKKL H N+VRL EVID P +D LF+ +E ++ G VM W++   +Y +   T GVL  +      R ++  L+FLH NH+ HRD+KPEN+LL+ D   KLADFGVA + +++               P+++ N+      +L   EGT+ F APE CTT
Sbjct:    3 VIETDTANVQVNSEGATSYVNNYKIMDMLGEGTFSKVYLCQN---DTGTE--FALKIINKSIL------------KRKREYKRVDGKLVLSNAFQKVQKEVAIMKKLAHSNLVRLYEVIDSPADDKLFLVLELIRGGQVMHWDDQKFRYYARNTTTGVLGKETVRECMRDVVAALDFLHSNHICHRDIKPENILLSGDQY-KLADFGVAHMNEDE---------------PSISTNNGNVSSLKLRSTEGTYHFLAPE-CTT 230
[Close]
BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Match: A0A7S3Y6M6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6M6_HETAK)

HSP 1 Score: 148 bits (373), Expect = 3.660e-38
Identity = 75/168 (44.64%), Postives = 101/168 (60.12%), Query Frame = 1 
Query:  292 LQNVRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEESTGQYVSPATGGVLPPKAAASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTKDGVAKLADFGVAQVF--DEQQEPPTPPPSSDGSPSPAVTENSAERHRHQLTQPEGTWCFWAPEIC 789
            L  V++E+A+MKKL HPN+V++ EVIDDP  D LFM +E+V  G VM W+E+   + S  TGGV   + AA +   +  G+++LH NH+ HRDLKPEN+LL+     K+ADFGV+  F  DEQ+ P                +      R QL   EGTW FWAPE+C
Sbjct:    7 LNKVQQEIAIMKKLCHPNLVQMFEVIDDPDGDQLFMVLEYVPNGIVMEWDETADAFYSRFTGGVYTEEQAAGHMMDICAGMQYLHQNHICHRDLKPENILLSSQNRCKIADFGVSHYFEQDEQKSP--------------RRDLYRSESRGQLKNTEGTWSFWAPEMC 160
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5620.13959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNU8_ECTSI1.560e-15182.94Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JFG3_9PHAE1.590e-13580.07Protein kinase domain-containing protein (Fragment... [more]
A0A7S2RI55_9STRA4.520e-4739.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9U356_9STRA4.710e-4739.69Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4E3P3_9STRA2.980e-4440.15Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A835ZD22_9STRA2.420e-4344.39Kinase-like domain-containing protein n=1 Tax=Trib... [more]
F0YAL4_AURAN1.570e-4041.84Eukaryotic translation initiation factor 3 subunit... [more]
A0A485KAP4_9STRA6.520e-3938.75Aste57867_2731 protein n=1 Tax=Aphanomyces stellat... [more]
W2LM61_PHYPR3.180e-3837.40Serine/threonine protein kinase n=9 Tax=Phytophtho... [more]
A0A7S3Y6M6_HETAK3.660e-3844.64Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5620contigL-elsbetiae_contig5620:4842..11806 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score470.3
Seed ortholog evalue6.6e-130
Seed eggNOG ortholog2880.D7FNU8
KEGG koko:K07359
KEGG Pathwayko04140,ko04152,ko04211,ko04920,ko04921,ko05034,map04140,map04152,map04211,map04920,map04921,map05034
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptidyl-threonine phosphorylation
EggNOG OGsKOG0585@1,KOG0585@2759
EC2.7.11.17
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons7
Model size894
Cds size894
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816597.5197694-CDS-L-elsbetiae_contig5620:4841..49791622816597.5197694-CDS-L-elsbetiae_contig5620:4841..4979Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 4842..4979 +
1691683674.0811546-CDS-L-elsbetiae_contig5620:4841..49791691683674.0811546-CDS-L-elsbetiae_contig5620:4841..4979Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 4842..4979 +
1622816597.5299957-CDS-L-elsbetiae_contig5620:5702..58401622816597.5299957-CDS-L-elsbetiae_contig5620:5702..5840Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 5703..5840 +
1691683674.095367-CDS-L-elsbetiae_contig5620:5702..58401691683674.095367-CDS-L-elsbetiae_contig5620:5702..5840Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 5703..5840 +
1622816597.540181-CDS-L-elsbetiae_contig5620:7961..80841622816597.540181-CDS-L-elsbetiae_contig5620:7961..8084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 7962..8084 +
1691683674.1063886-CDS-L-elsbetiae_contig5620:7961..80841691683674.1063886-CDS-L-elsbetiae_contig5620:7961..8084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 7962..8084 +
1622816597.5524604-CDS-L-elsbetiae_contig5620:8649..87841622816597.5524604-CDS-L-elsbetiae_contig5620:8649..8784Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 8650..8784 +
1691683674.11713-CDS-L-elsbetiae_contig5620:8649..87841691683674.11713-CDS-L-elsbetiae_contig5620:8649..8784Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 8650..8784 +
1622816597.5652409-CDS-L-elsbetiae_contig5620:9343..94601622816597.5652409-CDS-L-elsbetiae_contig5620:9343..9460Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 9344..9460 +
1691683674.1283853-CDS-L-elsbetiae_contig5620:9343..94601691683674.1283853-CDS-L-elsbetiae_contig5620:9343..9460Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 9344..9460 +
1622816597.5774724-CDS-L-elsbetiae_contig5620:10276..103591622816597.5774724-CDS-L-elsbetiae_contig5620:10276..10359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 10277..10359 +
1691683674.1367667-CDS-L-elsbetiae_contig5620:10276..103591691683674.1367667-CDS-L-elsbetiae_contig5620:10276..10359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 10277..10359 +
1622816597.5883362-CDS-L-elsbetiae_contig5620:11646..118061622816597.5883362-CDS-L-elsbetiae_contig5620:11646..11806Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 11647..11806 +
1691683674.1486073-CDS-L-elsbetiae_contig5620:11646..118061691683674.1486073-CDS-L-elsbetiae_contig5620:11646..11806Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5620 11647..11806 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5620.13959.1prot_L-elsbetiae_contig5620.13959.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5620 4842..11806 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5620.13959.1

>prot_L-elsbetiae_contig5620.13959.1 ID=prot_L-elsbetiae_contig5620.13959.1|Name=mRNA_L-elsbetiae_contig5620.13959.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp
RARVSTALPKVRETMTAAIELSADGFLQQINEYECIRDLGNGATAEVKLC
RRVDKQTGQEEWVAVKVFNKSLLNRQARGFAFGRRKKKKDHKRDSQVLQN
VRREVALMKKLVHPNVVRLLEVIDDPQNDLLFMAMEFVQEGAVMVWEEST
GQYVSPATGGVLPPKAAASYFRGMLDGLEFLHGNHVVHRDLKPENVLLTK
DGVAKLADFGVAQVFDEQQEPPTPPPSSDGSPSPAVTENSAERHRHQLTQ
PEGTWCFWAPEICTTSTVANDRARQAAATRARGAEAAKAMALGIGGGS
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mRNA from alignment at L-elsbetiae_contig5620:4842..11806+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5620.13959.1 ID=mRNA_L-elsbetiae_contig5620.13959.1|Name=mRNA_L-elsbetiae_contig5620.13959.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6965bp|location=Sequence derived from alignment at L-elsbetiae_contig5620:4842..11806+ (Laminarionema elsbetiae ELsaHSoW15)
CGCGCGCGCGTCTCCACTGCTCTCCCAAAGGTCCGAGAGACAATGACGGC
GGCGATCGAGCTCTCCGCGGACGGATTTCTGCAGCAGATCAACGAGTACG
AGTGCATCAGAGACCTCGGGAATGGCGCCACAGCGGAGGTATGTATGTTG
TATGTATCTGTGTAATTTTAATTTTTCTCCACGTGGTCATCGATTCATGC
ATCAAACTATGTACCAAATGAAAGCTGGCATCAAGAGCTTTCATTGGCAT
CAATGTATGTATTTTCGTCCTGACATAATTGTGTGATGAAAAAGTTGTGC
ATGATGCAAGTTGAGAGAAAAAACGAAAAACAAATGTATACAAAATGCTG
GCAAAGAGAGTCTATTAAAAAAAATGTGACCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCGCCCACCATTTTGGGCGC
AGCGCGATCATGCATGCATGTATGTATGTATGTATGTATGTACGCATGCA
TGCCGTTGCGTGCCGTGCCCGCGCCCGCGCGCGCGCGCGCGAAACCCCCT
CACCCCGCCCCGACGCCTTGAAATCAGCGCATCTGCCTTTCCCTTGCTCG
CTCGACTTTTCTCGGCGGCGGTTGGGTGCGGGACCTGTCTTCCATCCGAC
GCGTTCCGTGTTCCGTGTTTGTGTTCGTGTGTGTATGTATGTATATATGT
ATGTATGTATGTACTGCGACAAAAAAACAGCACGGAATGATGGACGGTCA
TTTCATGGGGACGGCCATGGTGGTTGTTGGTGCCGCGCCATTTGTATATG
CCATTCATGCTGCTGTGCTGTGCTGTGCTATGTATGTTATCATGCGTATG
TATGTAAAAAGGTGAAGCTGTGCCGACGGGTGGACAAGCAGACGGGACAG
GAGGAGTGGGTGGCGGTGAAGGTGTTCAACAAGTCTCTGCTGAACCGGCA
GGCCCGGGGCTTCGCTTTCGGCCGGCGAAAGAAGAAGAAGGACCACAAGG
TGCGCGTTGCTGCACGCACGTTTTTATGTACGTGCATGCTGCTTTGCTGA
ACGTATACTAGTATAGGAGTACGCGAATAAATGTGCACATGCATCAACTT
CGACCTCACCGTCGACGAGGGAAAGGGACGGCTGAAACCTTCTCGCAATA
AGAATCTTAGGCAAGCACCGCAGACGGGGGGGGGGGGGGGGGCGGGGGGG
GGCCCTTCTGCGTTTTCACGGTTCAGTAATCTGGCAAGATGGATGCCCTN
NNNNNNNNGCGGGCGGGGAGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGCTCGGGGGGAGCCCTTCTGCGTTA
TCACGGTTCAGTAATCTGGCAAGATGGATGCCCTCGTGGCAAGGAGCTCG
TCGAGCACCGAAAATACCTGTGAAGAAAAAAATAAAATCAAAATGTATTT
GCCAATGCAGCGTTTGTCCGTTGTATGTAGATACGTTGGGCCGAGGTTTT
GGCCGGAGTTTTGAGATAGATTGATGCAGTGAACGAACGGCAACGGGAAA
GCTTTTTGTGGGGGCGACGCGAGAGAGGAGGGAAGGCGTACGTACTGGGT
TCGTTCGTTACGTGCCTCTTTCCGTGGAGCGAGTCTTTTCTTTTTTCGGA
CTACCATACTACTGCTGTCTTGGCTTTTGGGCGGCGATTTGAGGCGAGCG
AGAGAGGAAGGACTGCCAGGCGAGAGGCTGGCGAGGCTAGTCGGCTGCTG
CTGCAAGACTGGGGGCGCGGAGGGGGCGGGATGGCAAGGGAGGGGCCGGG
GGTGGGTAAGGAAGATGGGGGGGGGGGGGGGCTTGACTGGTTTTTTGCTT
GCCTTGGTTTTCGAGGGCAAAGGACTTGNNNNCAGAGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGG
GGGGGGGGGGGGCTTGACTGGTATTTTGCTTGCCTCTGTTCTCGAAGTCA
AATGACTTGATCAAGAATTGAGCCAAGGGAACACTACTTCTGAGCGGCGA
AAAGGAGACGTGGACCCTTTTTTGCGGACAAGGGTGTATGAGGCAAAGAG
TGTAGAGGAGGCGGGTGAGATGGTGCGTGCGGTATTCGTAGTCGCCAGCC
CATGAACACTCGGACTACGATCACAGGCTTCCTTCCTACAATAGAGCCAG
CCCCCAATTATAAAAAAGAGCTGTTGGGGCAGCGGGGGCGGGGGCGGGGG
GGGGGGAGGGGGTATGTTTCTAGGAAATTAAGAGTGAAAAGTCCTCCACA
GCCTCTTTTTGAGAAGTGAGGGCTCTATTGCTGGAAGTCTATCATCCGGC
GTCTTCCCGGGGGCGACGGACGTAGTATCATACTTTCCTTCGTAGGAGGG
GTGCGGCTCTGCGCGGCGGCTTGTTTCCGGACGGCCTAGGAGAGGAGACA
AAAGACAAGCCGATCGCGTTTTTGGGCAGAGAAAAAAGACAAGACAGACG
ATCGAGAAAGTGCTGCCTCGAAGATACTTCATATATTGTGTATACAACCA
GGAAAAACCCTGGAAATAAAATCATCCAGACGAATGCACACGTTCTTCCA
TCCGCTGGCTTTATTCGATCACAATGCCCCCCTTTCCTTTTCATACACAC
GTGTTGTGTGTTCCGCATCTGAATCACCTACTTACCTACCCCCCCCCCCC
CCCCCCCCCCCCTTTCCTTTCACCCCGGCCCGTCTTGCGAGGGGGTGGTG
GGGGGGGGGGGGGTGGGGGTGGTTGGTGNNNNNNNNNNCCTCCCCCGGGT
TTTTTCGATCCCCATGCCCCCCTTTCCTTTTCCTACCCCCGTGTTGTGTG
TTCCGCATCTGAATCCCCTCCTTCCCCCCCCCCCCCCCCCCCCTCCACCC
ATTTATCCTTCCGGGCGCGCGTCTTTGGAATGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCGTGCCGTGGTTGAATGTCT
CGCGGGGGCCACGCTTGGTTTCGGCCCGAACAAATAATTCGGCGTGATGG
TTTCGTGGGCGGCCCCGCAGCGGGACTCTCAAGTGCTGCAGAACGTTCGG
CGCGAGGTGGCTCTCATGAAGAAGCTGGTCCACCCGAACGTGGTGCGGCT
GCTGGAGGTCATCGATGACCCCCAAAACGACCTTCTCTTCATGGTGAGAA
CGACGAGATAACGGGTACGCGGGGGAGGGGGAGGGGGAGGGGGCTACATA
CACGAGCGGTCGAGGATGCCAAGATAATTTACCCCCCCTGTCCGGTTTCG
TATTTGCTCTTTTTTTAGAAGATGTGATGCTTCGTAGGTACGCTTGAGAA
GTTGACCGGTTCGTGCGCTGCGTGCGCGTCCATGTATATCCTTATTTTAA
GGCCATGACTAACATGCGAAGTATGTTGCTACATTATATTTATGTAGATC
CTACATTATATGTAGATCAATGCCTTGTGTTTCCATCCATTTTTTCATTT
CACTTGCATTCGTTGCACCCGGCCGAAGTGTTTTATCTTTCTATTCGCCC
TCCATCGATTTGTGGTTCCAATCCACCAATTTTCTTGAGTGTTTTTTCAC
GTGTGGCTTTCTTTGTGTGTGTAAATTATGTGTATGCGCGCGCGCGCGCG
CGTTGCCTTCCCGTTTTTTTTTTGTCGTTCGGACGATTTGCTGTTTTCAT
TGTTTTTTCTCCTTGTGAACCAACGTAACCCGTCCCCCCACCCCCACCAT
CCGTCCAGGCCATGGAGTTTGTCCAGGAGGGCGCCGTGATGGTGTGGGAG
GAGAGCACCGGGCAGTACGTGAGCCCCGCGACGGGAGGAGTGCTGCCGCC
CAAGGCCGCCGCGTCATATTTCAGGGGGATGCTGGACGGGCTCGTGAGTC
TTCTTTCTTCCTTGTCTTGCCGACTTTGCCATCAGCCCCGTCAAAGGCAA
TCACCAAATTATGTACTGCCATCAATGGTCGGTATAGGACGGTCGGTATC
GGAGATCGGTATCGGAGATCGCCATCGAAATATCGCCATCGAAATATCGA
AATATCGAAATATCGCCATCGAAAGACCGGCATCAGAGTCGGGTGGCCGA
GATGAGGGTCGCCGCCAGAGTTTTATCTATTTTTGTTTCCGCCAAAATAT
ACGGAGGCGGCGCGGTTTGCACGTTGTCTTGTCTGCACTTGTTTGTTTGT
TTTTTCGGTACATCGTTGCGGTATCTTTTGGTGTGCGTTGTGGATTTTTT
ATTTCGCCTGCTGTATACCTGTCGTGCCTGCTCCCTCCCCCACCCCCCCG
CACTCTGCGCAGTTGTTGCTGCGTCCCGTTGATGTCTTTCTTGCCCTACC
CTGCCCCGTCCTACACCTTGCGCTTTACTGCTGTGGTCCCTCGCCCGTGA
TGCTTGATGCGGCGGCGGGGGCGGCGGTGATGCCATGTGGCGTGTCTTGC
AGGAGTTCTTGCACGGGAATCACGTAGTCCACCGAGACCTGAAGCCGGAG
AACGTGCTGCTCACCAAGGACGGCGTGGCCAAGCTCGCCGACTTCGGTGT
GGCGCAAGTGTTTGATGAGGTGAGAGCGTGGCCGGCCCGGCCCGCCCCGC
CGTGCGTGTGATTCTATCGTCCTTGGTCCTTGGTCGCCCGTCCTGCCTGA
AGCACCAATCAACGCATATTTTCAGTCAATCGATCGGTCCATTCATCCGT
CCGTTGATGTAGGTGCCTTTTTTCCCCATCTCCCGAGCATTGCGCGACAG
AAACAAACGTCTCGTGTTTTTTCGCGACGCGGCATTGATGCTATTTACTG
TTGCAAGATGTACAACCACCAGTCTGGTACTTGGTTAACCTTTTACCTCA
TGGCTGAGTGGTCTAATCCCTTGACAATACAATATGGCGTTCTCGGCAGG
AGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCGCCCCTCCTCGCCGCC
CTCTGGGCCCTGGTGAGGTGGGGGGGGGGAATGGCGGGGCCGGCGCCGAT
TGAGAACATGGGTTAAACCCTGTCTCTTTCCCCCTTTTTTCCCCAGGGGG
GGGGGGTCTAACCCCTTCAAAAAACAATTGGGGCTTCCCGGCGGGGGCCC
CCCCCCCCCCCCCCCCTCCCCTGTGTGACCCCGGTTGGGTCGTCTAGCCA
GTCGTAGTAGAGGAAGGGGGCCAGTGGGGCAGACGACGAATAAGCCAATA
ATGGGAAGGAAAAATAAAATAGTAAATTTACATATACGTATAAATATACG
GTACGTGTTTGCAACAGCAGCAGCAACAACAAGAACAAATCGGATGAGAG
CCCCGATGACATCGAAATAATTCCATCACGGCCGCGCCGAGCAACAACGC
CCGTTCTCCGCTGCTGTTTCATTCCCCGACGCCAGCAGCAAGAGCCTCCG
ACACCGCCACCATCGTCCGACGGCAGCCCCTCTCCGGCGGTCACGGAAAA
CTCCGCAGAGCGACACAGGTGCGAAGCGAAGTGAACCGAGAGGATTGGTT
GGCCTCCTCTTGTTGTCTTCACATCAATAAAAACAGTTCCGATCTCTTGA
AAGATACCATATAAATCAGGTGTGATCAATAGCGGTACCCTAGCCCACAT
TTGAGACGGGACGTGACTCCGCGGGGTTCAACCGGTATTCCATATGCTTC
GTATAAGTATGTAGTGACGTAGTGTTGGTCCGGCCAAGTACGTATGTAGA
CAAATACCTATAAGCATGTCGGAAGAATTCAACATGTCCCCTGCAGAGTT
CTGCCTGGTCAACCAACATGTATTCCTTTTGATGAGGGGGAATAAAACGA
CTACATAGTAGTATGAAAAGCCTTGTAAGACTGCCTGTTGCAGACGCCGA
CCAGGAGGAAGAGAGACCGAGCAGATCAAGCAGCCGTAGTAGACAGACAC
CAGTGCCGCCAGCAAAAGCTGCTTATAAAGTACATTGTGAATGGCGCCTG
GCCGTAACCGACCGCGTGAGGTTTCACTCTGGGTGCTTGTTTTGTGCGTT
TCTAGAGCTTTGGCCCATGCCCGACGGGTGACGATCTCACCGTGCCGTCC
GAACCTCCGCCATACCTCGCCCATACTCGAGTCTGCGTGTGCCTGGCTGG
CCCTACAGATACTACATAGACAGGCCAACTAAAGTGATAAGTGCCATTTT
CATTTACATGAATCGCTCGATGACCTTGTTTTCGCTTATTAATGTATGTA
CACATGCATACGAGTGTAACGGCTCCAGGCAGTGGTTTTCTCGCCCACGT
CAAATCCGCACAATTTACTTGTTTCTACATAATAATTTATACTAAGTTTT
TTCCCCCGCCCGAAGCCGCCGCCGCCGTGAACAAAAAGACGAAAACAACC
ACACCACGCCGGCTCACTCATTTACTCACTCACTCACTTTCTCACTCACT
CACCTACTCACTCACTTACTCACTTACTCACTCACTTACTCACTCACTTA
CTCACTCACTTACTCACTCACTCACTCACTCACTCACTCACTTACTCACT
CACTCATTTACTCACTCACTCATTTACTCACTCACTCACTCACCCACTCA
CCCATTCACTCATGGCTCTCTCTCACTCACTCACCTACTCACCCACTCAC
TCGCTCATTCACTCACTCACTCGCGGAGTAGAATGGAATGGGAATGGAGT
GAAGTCAAGTCAAGTCAAGTGTGGGCGGACTCTCTCTCACTGCCTGACTG
CCTGCCTGACTGCCTGGCTGGCTGACTGACTTGATCTGATACATACGCAT
TGTAGGCATCAGCTGACGCAGCCGGAGGGAACCTGGTGCTTCTGGGCGCC
GGAGATCTGCACGACGTCGACCGTCGCGAACGACCGGGCGCGCCAGGCGG
CGGCGACGAGGGCGCGGGGGGCGGAGGCGGCGAAGGCGATGGCCCTGGGG
ATCGGTGGCGGCAGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5620:4842..11806+

>mRNA_L-elsbetiae_contig5620.13959.1 ID=mRNA_L-elsbetiae_contig5620.13959.1|Name=mRNA_L-elsbetiae_contig5620.13959.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1788bp|location=Sequence derived from alignment at L-elsbetiae_contig5620:4842..11806+ (Laminarionema elsbetiae ELsaHSoW15)
CGCGCGCGCGTCTCCACTGCTCTCCCAAAGGTCCGAGAGACAATGACGGC
GGCGATCGAGCTCTCCGCGGACGGATTTCTGCAGCAGATCAACGAGTACG
AGTGCATCAGAGACCTCGGGAATGGCGCCACAGCGGAGCGCGCGCGCGTC
TCCACTGCTCTCCCAAAGGTCCGAGAGACAATGACGGCGGCGATCGAGCT
CTCCGCGGACGGATTTCTGCAGCAGATCAACGAGTACGAGTGCATCAGAG
ACCTCGGGAATGGCGCCACAGCGGAGGTGAAGCTGTGCCGACGGGTGGAC
AAGCAGACGGGACAGGAGGAGTGGGTGGCGGTGAAGGTGTTCAACAAGTC
TCTGCTGAACCGGCAGGCCCGGGGCTTCGCTTTCGGCCGGCGAAAGAAGA
AGAAGGACCACAAGGTGAAGCTGTGCCGACGGGTGGACAAGCAGACGGGA
CAGGAGGAGTGGGTGGCGGTGAAGGTGTTCAACAAGTCTCTGCTGAACCG
GCAGGCCCGGGGCTTCGCTTTCGGCCGGCGAAAGAAGAAGAAGGACCACA
AGCGGGACTCTCAAGTGCTGCAGAACGTTCGGCGCGAGGTGGCTCTCATG
AAGAAGCTGGTCCACCCGAACGTGGTGCGGCTGCTGGAGGTCATCGATGA
CCCCCAAAACGACCTTCTCTTCATGCGGGACTCTCAAGTGCTGCAGAACG
TTCGGCGCGAGGTGGCTCTCATGAAGAAGCTGGTCCACCCGAACGTGGTG
CGGCTGCTGGAGGTCATCGATGACCCCCAAAACGACCTTCTCTTCATGGC
CATGGAGTTTGTCCAGGAGGGCGCCGTGATGGTGTGGGAGGAGAGCACCG
GGCAGTACGTGAGCCCCGCGACGGGAGGAGTGCTGCCGCCCAAGGCCGCC
GCGTCATATTTCAGGGGGATGCTGGACGGGCTCGCCATGGAGTTTGTCCA
GGAGGGCGCCGTGATGGTGTGGGAGGAGAGCACCGGGCAGTACGTGAGCC
CCGCGACGGGAGGAGTGCTGCCGCCCAAGGCCGCCGCGTCATATTTCAGG
GGGATGCTGGACGGGCTCGAGTTCTTGCACGGGAATCACGTAGTCCACCG
AGACCTGAAGCCGGAGAACGTGCTGCTCACCAAGGACGGCGTGGCCAAGC
TCGCCGACTTCGGTGTGGCGCAAGTGTTTGATGAGGAGTTCTTGCACGGG
AATCACGTAGTCCACCGAGACCTGAAGCCGGAGAACGTGCTGCTCACCAA
GGACGGCGTGGCCAAGCTCGCCGACTTCGGTGTGGCGCAAGTGTTTGATG
AGCAGCAAGAGCCTCCGACACCGCCACCATCGTCCGACGGCAGCCCCTCT
CCGGCGGTCACGGAAAACTCCGCAGAGCGACACAGCAGCAAGAGCCTCCG
ACACCGCCACCATCGTCCGACGGCAGCCCCTCTCCGGCGGTCACGGAAAA
CTCCGCAGAGCGACACAGGCATCAGCTGACGCAGCCGGAGGGAACCTGGT
GCTTCTGGGCGCCGGAGATCTGCACGACGTCGACCGTCGCGAACGACCGG
GCGCGCCAGGCGGCGGCGACGAGGGCGCGGGGGGCGGAGGCGGCGAAGGC
GATGGCCCTGGGGATCGGTGGCGGCAGCGCATCAGCTGACGCAGCCGGAG
GGAACCTGGTGCTTCTGGGCGCCGGAGATCTGCACGACGTCGACCGTCGC
GAACGACCGGGCGCGCCAGGCGGCGGCGACGAGGGCGCGGGGGGCGGAGG
CGGCGAAGGCGATGGCCCTGGGGATCGGTGGCGGCAGC
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