mRNA_L-elsbetiae_contig562.13954.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig562.13954.1
Unique NamemRNA_L-elsbetiae_contig562.13954.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: D7G6V1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V1_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 3.740e-148
Identity = 203/262 (77.48%), Postives = 231/262 (88.17%), Query Frame = 1
Query:    1 TEPFFPTENCAGRCDQDFRGLFPPVHRPLSLRDDVSETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGVKLPGAKFTKELTMESFPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTGNFGRPVCPTKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEFQFLWD 786
            TEP F  +    R DQ F GLFPPVHRPL  RD+ SE  RGLW+FEQPL T+PTV M++RMAVYAL+DG++  YNPIAPTEETL+EI ++FG PDHIIVPTTA+N+++ V GWAERFPRATFWGLEGVKLPGAKFTK+LTMESFPESWKAELD+SILEGN +FRECFLLHRTTRSVFA+DS VEMGE NIP+P+LRA S ++GNFGRPVCPTKSLLWNR+KCKSA+S+VL+WDFDKVYA HGECPIQDAK AIR EFQFLWD
Sbjct:   39 TEPLFAPDCAPERHDQAFPGLFPPVHRPLRWRDEDSEPMRGLWLFEQPLQTVPTVEMYSRMAVYALSDGSICVYNPIAPTEETLQEISDAFGGPDHIIVPTTAWNNLLFVAGWAERFPRATFWGLEGVKLPGAKFTKDLTMESFPESWKAELDVSILEGNGIFRECFLLHRTTRSVFAMDSFVEMGEGNIPNPVLRAASKMSGNFGRPVCPTKSLLWNREKCKSAMSRVLDWDFDKVYANHGECPIQDAKEAIRGEFQFLWD 300          
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A836C726_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C726_9STRA)

HSP 1 Score: 246 bits (628), Expect = 9.100e-73
Identity = 121/246 (49.19%), Postives = 162/246 (65.85%), Query Frame = 1
Query:   46 QDFRGLFPPVHRPLSLRDDVSETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFG-SPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGVKLPGAKFTKELTMESFPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTGNFGRPVCPTKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEFQFL 780
            Q++  +FPP  RPL++ D VS  +  + VF+QP       R   R A+Y L DGTV+ YNPIAPTEETL E  ++FG  PDHIIVPT +Y  +V V GW  RFP A FW L GV+L GA+ +K+LT ES P S   EL++++++ + + +EC+LLHR T+S F++DS   + +E+I   L  AG    G + RP C TK L+WNR  C+ AIS+VL WDFDKV  THG CPI +AK A+ + F FL
Sbjct:   39 QEWETMFPPSTRPLTVLDHVSTAD--MVVFQQPHGLGSLYRHMMRHAIYKLKDGTVIVYNPIAPTEETLHETVQTFGREPDHIIVPTNSYEHLVMVPGWTRRFPNAVFWSLPGVELDGAQISKDLTEESLPGS--GELEIAVMDASPLLQECYLLHRPTKSAFSIDSFNWIADEHIASSLGGAGIKAVGGYNRPHCSTKMLMWNRDNCRRAISRVLSWDFDKVIPTHGVCPIPNAKEAMTEAFSFL 280          
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A8A4TK56_9BACT (DUF4336 domain-containing protein n=1 Tax=Sulfidibacter corallicola TaxID=2818388 RepID=A0A8A4TK56_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 2.580e-13
Identity = 64/234 (27.35%), Postives = 110/234 (47.01%), Query Frame = 1
Query:   82 PLSLRDDVSETNRGLWVFEQPLHTIPTVRMFNRMAVYALA-DGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEG--VKLPGAKFTKELTMESFPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEMGEEN-IPHPLLRAGSVLTGNFGRPVCPTKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEF 771
            P  L +   E   G+W   QP      +++  RM V  L   G +  ++PI   E+ L++  E+ GS  H+  P   ++  + V  +  ++P A F+   G  +K P  +F  E+  E     W +EL   ++ G     E    H TTR++   D  + + EE+ I   +L       G FG      K+L+ +R   + +ISK+LEWDF+++  +HG    +D ++A +  F
Sbjct:    5 PYGLLEPFEE---GIWTCRQPFRFFG-LQIGARMTVIDLTGQGDLFVHSPIKLGEK-LKQDLEALGSVRHVAAPNCWHH--LFVGDYKAQYPDARFYCSPGLDIKRPDIEFD-EVLEEGKAYPWSSELAHHVVGGCPTLNEVVFFHATTRTLVVTDIGLHICEESPITTRMLFRVMGNYGRFGWAPIEKKALIKDRVLFQQSISKILEWDFERIVLSHGRLVREDGRSAFQKAF 230          
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A0D8CMT2_9GAMM (Methanol oxidase n=1 Tax=Thalassomonas actiniarum TaxID=485447 RepID=A0A0D8CMT2_9GAMM)

HSP 1 Score: 71.2 bits (173), Expect = 3.490e-10
Identity = 53/218 (24.31%), Postives = 95/218 (43.58%), Query Frame = 1
Query:  124 LWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGVKLPGAKFTKELTMESFPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLT-------GNFGRPVCPTKSL---LWNRKKCKSAISKVLEWDFDKVYATHGECPIQDA 747
            +WV E  +    T     RM +  L+DG +  ++P A + E  +E+ E+ G    I+  +  +NS +  + W + FP A  +   G+          L  ++F   W+ +L+   + G   F E    H+ T+S+   D +    +E  P        V+T       G  G+ V P   +   + N+    S +++V  W+FD++  THG+    DA
Sbjct:    8 IWVHEDVMSMAGTPLRL-RMTIVRLSDGRLWLHSPTALSSELKKEV-EAQGQVAFIVGASNGHNSWL--QQWQDAFPEAGLYVSGGIPKKLGLSQYHLLDQAFDNIWRDDLEREYMPGVSFFNESVFFHKKTKSLIVTDFIQNHSDETPPG----LAGVITKCIFRPLGFKGKCVAPPLKMGFTIKNKTDFASFVTRVKNWNFDRIVVTHGDIIEADA 217          
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: UPI001D64C096 (DUF4336 domain-containing protein n=1 Tax=Waterburya agarophytonicola TaxID=2886916 RepID=UPI001D64C096)

HSP 1 Score: 70.9 bits (172), Expect = 4.960e-10
Identity = 59/235 (25.11%), Postives = 111/235 (47.23%), Query Frame = 1
Query:  109 ETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGV--KLPGAKFTKELTMESFPESWKAELDLSILEGNDMF--------RECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTG-NFGRPVCPTKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEFQFL 780
            + +  LWV EQPL  +  + +  RM V  LAD ++L  +PIA T E  +++  S G+  ++I P   ++  + +    + +P+A      G+  K P  K  K LT +     + +EL+  +  G  +          E    H +T+++   DS     + + P  +  A  ++      +P    K  + +++  K+AI+K+L WDF++V   HG+    +AK  +   +Q+L
Sbjct:    4 QLDNNLWVAEQPLKFMG-LPVGTRMTVIRLADNSLLLISPIAITPEIKQQLN-SLGTVRYLIAPNLFHH--LFLADCQKVYPQAQIIAPPGLETKQPQLKIAKTLTQDEI--DFNSELEYQLFSGFQILIIPQIKIANEIVFYHPSTKTLIITDSAFNF-DGSYPWIIQLAMRMIDSYQTLKPSWLEKIAVRDKQAAKTAIAKILAWDFERVIMAHGKIVETNAKQQLAAGYQWL 231          
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A7S4C8N9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8N9_9EUGL)

HSP 1 Score: 69.3 bits (168), Expect = 1.510e-8
Identity = 55/246 (22.36%), Postives = 105/246 (42.68%), Query Frame = 1
Query:   58 GLFPPVHRPLSLRDDVSETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGVK--LPGAKFTKELTM-ESFPESWKAELDLSILE-------GNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTGNFGRPVCP--TKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAI 759
            G  PP       ++ + +    LWV E+P     ++ +  +MAV  LADG++  ++P+   +  L+    + G   +I+ P   Y  + + + W + +P A  +G  G K   P   F  E+ +  + PE+W ++L ++ ++        +  F E   +H  T+++   D        N P                   P   + ++ +R + K+A+ +++ WDFD V   HG    Q  K A 
Sbjct:  169 GRVPPSEWSNPGKEVLKKVAPDLWVAERPF-IWNSIDVGGKMAVVRLADGSLWVHSPVE-LDAPLKAALAALGPVKYIMSPN--YEHVKYAQQWIDAYPDAIAYGCPGAKEKFPQISFQAEVGVGNAVPEAWASDLLVTYMDCEHNPFTRSPFFNEVVFVHLPTKTLIVTDLFW-----NYPIDAPAGTRAWKWGMDEVYLPFYKQFMICDRSRFKTAVDRIVAWDFDSVLPCHGTYIAQGGKEAF 405          
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A232LW13_9EURO (Uncharacterized protein n=1 Tax=Elaphomyces granulatus TaxID=519963 RepID=A0A232LW13_9EURO)

HSP 1 Score: 61.2 bits (147), Expect = 1.460e-6
Identity = 56/244 (22.95%), Postives = 99/244 (40.57%), Query Frame = 1
Query:  142 PLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGV-----KLPGAKFTK--------ELTMESFPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEM-GEENIPHPLLRAG-SVLTGNFGRPVCPT----------KSLLW------NRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEFQFL 780
            P       +   R  +  LA G++  ++P+  T E  R I     +  +I  P   ++  +H+  W + FP A     EG+       P  K T+        +    +  + + +E D+  +  +   RE   LH+ TR+V   D L  + G E       RAG S  +G   + + P           K   W      +R+    +++K+ +WDFD++   HG+     AKT  R+ F++ 
Sbjct:   29 PFSRFGVFKFGGRGTIVKLASGSLAVFSPVMLTPEVQRTIASEGSNLKYIAAPDIEHH--LHLTAWKKAFPNAEIIAPEGLWEKRQANPDFKDTEFKHIFKSEDKGKHNISDEFDSEFDVEYVSSHGS-REIVFLHKPTRTVIEADLLFNLPGSEQYS----RAGVSPTSGILTKLILPLVSAKPPATGHKRFAWYVLSARDREGFAKSMTKIDQWDFDRLIPCHGDVIETGAKTVFRNVFEWF 265          
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A8J2TFJ8_9CHRO (Uncharacterized protein n=2 Tax=Chroococcus sp. FPU101 TaxID=1974212 RepID=A0A8J2TFJ8_9CHRO)

HSP 1 Score: 62.0 bits (149), Expect = 1.880e-6
Identity = 61/201 (30.35%), Postives = 93/201 (46.27%), Query Frame = 1
Query:   61 LFPPVHRPLSLRDDVSETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLR---EIKESFGSPDHIIVPT-TAYNSMVHVKGWAERFPRATFWG------------LEGVKLPGAKFTKELTMESFPESWKAELDLSILEGNDM----FRECFLLHRTTRSVFALDSLVEMGEENI------PHPLL 585
            ++P   R    ++ +S T   +W FEQ L  I  V +  RM V  LA G +L Y P+APT+E +R   E+ E  G   +II+PT +A    V V  +A RFP+A  +             L  +  P  + T  L  +S    +  E D  IL   D+    F E  L H+ ++++   D++V +  E        P+PLL
Sbjct:   23 IYPYSQRRTLRQEIISNT---IWTFEQ-LQGIFYVVVPIRMTVIKLAQGGLLVYAPVAPTDECIRLVNELVEQHGDIKYIILPTISAVEHKVFVGPFAYRFPKAQVYASPYHWSFPLNLPLSWLGFPPDR-TYILPKDSSQVPFADEFDYRILGPIDLGPGRFAEVALFHKQSQTLLLTDTIVSVPTEPPAIIRLDPYPLL 218          
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A7S3C6B3_9VIRI (Hypothetical protein n=2 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C6B3_9VIRI)

HSP 1 Score: 61.6 bits (148), Expect = 3.070e-6
Identity = 47/161 (29.19%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  124 LWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEG-----VKLP------GAKFTKELTMES---FPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEMGEE 564
            +W  EQ    +  V +  RM V  LADG +L + P+APT E +R ++E  G   ++++PTTA    V +  +A +FP    +   G     + LP      GAK    +  E    F + ++    LS+  G   F E  ++H++T+++  +DS+V+   E
Sbjct:   93 MWGLEQTQGVL-NVLVNVRMTVVKLADGGLLCWCPVAPTRECVRLVEE-LGEVKYVVLPTTALEHKVFLGPFARKFPDCEVYIAPGQYSVPLDLPFQWLGLGAKRVDGVLGECELPFADEFEGPEILSLSLGTGTFCEVAMVHKSTKTLLIVDSVVQCPAE 251          
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: UPI001EF17C04 (DUF4336 domain-containing protein n=1 Tax=Halomicronema sp. CCY15110 TaxID=2767773 RepID=UPI001EF17C04)

HSP 1 Score: 58.9 bits (141), Expect = 6.590e-6
Identity = 57/239 (23.85%), Postives = 108/239 (45.19%), Query Frame = 1
Query:  103 VSETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGV--KLPGAKFTKELTMESFPESWKAELDLS--------ILEGNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTGNFGRPVCPTKSLLW---NRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEFQFL 780
            ++E    LW   Q L  +  + +  RM V  L +  ++  +P+ P +   R   ++ G+  H+I P   ++  ++       +P+A  WG++G+  K P  +F   L     P S+   L           +L+G  +  E    H+ ++++   D      +E  P     A  VL G++ + + PT+   W   ++   + +I +VL+W+FD V   HG     DAKT +R+ F++ 
Sbjct:    4 LTEMAPDLWTATQLLRFLG-LEVGCRMTVVRLPNRELVLISPL-PLKHGDRARLDALGTVKHLIAPNRFHH--LYFGNAQALYPQAQAWGVQGLAQKRPDLRFDGTLNE---PGSFADVLHYLPVEGFGSIMLQGVQLAHETVFWHQPSQTLILTDIAFNF-DETFPFTSRLAAQVL-GSY-QTLRPTRLEKWGSFDKDAVEQSIRQVLQWEFDLVIPGHGSIIENDAKTQLREGFEWF 232          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G6V1_ECTSI3.740e-14877.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C726_9STRA9.100e-7349.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8A4TK56_9BACT2.580e-1327.35DUF4336 domain-containing protein n=1 Tax=Sulfidib... [more]
A0A0D8CMT2_9GAMM3.490e-1024.31Methanol oxidase n=1 Tax=Thalassomonas actiniarum ... [more]
UPI001D64C0964.960e-1025.11DUF4336 domain-containing protein n=1 Tax=Waterbur... [more]
A0A7S4C8N9_9EUGL1.510e-822.36Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A232LW13_9EURO1.460e-622.95Uncharacterized protein n=1 Tax=Elaphomyces granul... [more]
A0A8J2TFJ8_9CHRO1.880e-630.35Uncharacterized protein n=2 Tax=Chroococcus sp. FP... [more]
A0A7S3C6B3_9VIRI3.070e-629.19Hypothetical protein n=2 Tax=Prasinoderma singular... [more]
UPI001EF17C046.590e-623.85DUF4336 domain-containing protein n=1 Tax=Halomicr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig562contigL-elsbetiae_contig562:4937..9835 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score88.6
Seed ortholog evalue3.8e-15
Seed eggNOG ortholog631454.N177_0790
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Domain of unknown function (DUF4336)
EggNOG OGs1JP89@119043,1PWXN@1224,2U2SU@28211,COG4221@1,COG4221@2
COG Functional cat.S
Best tax levelRhodobiaceae
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF4336
Ec32 orthologEc-01_012140.1
Exons5
Model size2074
Cds size621
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816596.890985-UTR-L-elsbetiae_contig562:4936..50771622816596.890985-UTR-L-elsbetiae_contig562:4936..5077Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig562 4937..5077 +
1691683673.53971-UTR-L-elsbetiae_contig562:4936..50771691683673.53971-UTR-L-elsbetiae_contig562:4936..5077Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig562 4937..5077 +
1622816596.9038484-UTR-L-elsbetiae_contig562:5412..54391622816596.9038484-UTR-L-elsbetiae_contig562:5412..5439Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig562 5413..5439 +
1691683673.5511239-UTR-L-elsbetiae_contig562:5412..54391691683673.5511239-UTR-L-elsbetiae_contig562:5412..5439Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig562 5413..5439 +
1622816596.9703565-UTR-L-elsbetiae_contig562:8550..98351622816596.9703565-UTR-L-elsbetiae_contig562:8550..9835Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig562 8551..9835 +
1691683673.6089404-UTR-L-elsbetiae_contig562:8550..98351691683673.6089404-UTR-L-elsbetiae_contig562:8550..9835Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig562 8551..9835 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816596.9193237-CDS-L-elsbetiae_contig562:5439..55541622816596.9193237-CDS-L-elsbetiae_contig562:5439..5554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig562 5440..5554 +
1691683673.560653-CDS-L-elsbetiae_contig562:5439..55541691683673.560653-CDS-L-elsbetiae_contig562:5439..5554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig562 5440..5554 +
1622816596.9331422-CDS-L-elsbetiae_contig562:7012..71551622816596.9331422-CDS-L-elsbetiae_contig562:7012..7155Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig562 7013..7155 +
1691683673.5708992-CDS-L-elsbetiae_contig562:7012..71551691683673.5708992-CDS-L-elsbetiae_contig562:7012..7155Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig562 7013..7155 +
1622816596.9464781-CDS-L-elsbetiae_contig562:7649..78441622816596.9464781-CDS-L-elsbetiae_contig562:7649..7844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig562 7650..7844 +
1691683673.5837994-CDS-L-elsbetiae_contig562:7649..78441691683673.5837994-CDS-L-elsbetiae_contig562:7649..7844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig562 7650..7844 +
1622816596.9588206-CDS-L-elsbetiae_contig562:8382..85501622816596.9588206-CDS-L-elsbetiae_contig562:8382..8550Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig562 8383..8550 +
1691683673.5981164-CDS-L-elsbetiae_contig562:8382..85501691683673.5981164-CDS-L-elsbetiae_contig562:8382..8550Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig562 8383..8550 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig562.13954.1prot_L-elsbetiae_contig562.13954.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig562 5440..8550 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig562.13954.1

>prot_L-elsbetiae_contig562.13954.1 ID=prot_L-elsbetiae_contig562.13954.1|Name=mRNA_L-elsbetiae_contig562.13954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp
MFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNS
MVHVKGWAERFPRATFWGLEGVKLPGAKFTKELTMESFPESWKAELDLSI
LEGNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTGNFG
RPVCPTKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDE
FQFLWD*
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mRNA from alignment at L-elsbetiae_contig562:4937..9835+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig562.13954.1 ID=mRNA_L-elsbetiae_contig562.13954.1|Name=mRNA_L-elsbetiae_contig562.13954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4899bp|location=Sequence derived from alignment at L-elsbetiae_contig562:4937..9835+ (Laminarionema elsbetiae ELsaHSoW15)
ACAGAGCCCTTCTTCCCCACAGAGAACTGCGCGGGACGGTGCGACCAAGA CTTCCGGGGGTTGTTTCCTCCTGTGCATCGACCGCTCAGTCTACGCGACG ATGTATCAGAGACAAATCGGGGGCTTTGGGTCTTCGAACAGGTATTTTTT TTGGACAGATTCGAGTGACGTGTGTATTCTTGGCTGCGCTGTGTTACTTG TTGACTTGAATCTCGCCCTATTGTCTCAAATACGGTACGCCGACGACTGC TTCTGCCGTTACTACTTCGCCGGGACGACGAGTTGATGTATGGGCCATAC GCCTTCAGCTCGAACGGCTTGATGTGAGCTAAAGCACAAATTTCGACTTT GACTTGATTTTTGAATACCCCAGAATGTCAGCTGACGCCTTCGGCTTCCT CTCGTCCCGAAGATCTTCAAACCTCATCCATGATCCAACACACTTCTCTC TCTCTCCCCTCCCCCCCCCCGTTCAGCCGCTGCACACCATTCCGACGGTG CGTATGTTCAACCGGATGGCTGTGTACGCGCTGGCTGACGGGACAGTGCT GGCTTACAATCCCATTGCACCTACTGAGGAGACCTTGCGTGAGATCAAGG AGTCCTTCGGATCGCCAGGTGTGTGTTGGGTGTTGAGGATGCGGCGAAAA AAATGCAGTTTATTTGCCCGTGAGGTTCGGAGTTCAGGGCATTTAAAAGT TGTGGGGGAAGTTGCAAAGCAGTATTGTGGTTGATGTGATCACATGCGTG TTTTATATCACAAGCTGCTGCAGCATTGATGTGTGTGCGAGTAAGTACCG GTAGTGGGTTGCTGGGTTGCACATCAATGACATTTCAAAATTTGATTTTT TAGACGAGTATATTGAACATCATTGGGTTACACATAGGGAGCTGATATCG TAGGAAGATGAACAAAATCGCACCCGCTGGGAGCAAAAACAAGTGATGTA AAAATTTAAAAATAGTCACGTATGTACAGAAGCAGCGGCAGAGTTTTTTA CCTTCCAGGCCTCGGGCCTTGTTGTTAATGTTGTCTTCACATTAAAAACC GTTCCGATCTCTCTATCCAGAAGACCTCCATGAGTCCGTACTATTCCAGC ACTGACGCGGTCAATTCCCGTGGTCACAGAATAACCTACCCTAAAAGGGT GTAGACTGCTGAAAAATAAAAATAAATTAAGCACAACAAAAGATACGTAT GGTCCGAGCCTCCGCTCCCCTCTACACGCTATGCGAGGTGAAAACAAAAG TGGACAAGCCAACATCACCAACCGCGGTGGAATACGCCCCCTGGTTCTAT CTGGGTTCCCCAAACAATGCCGGGTTGTTCCGCGCCGGGTTCTCGCCGAC CAGGCCGCTTAGGCGGCACCTTATCTCAAACTTCTCGTCTTACATAAAAA GAGCATAAGAGGCAGAGAGAGAGAGGCCAGCAAAAATGATGAAATGATTA TGATCGTCATACATACATACCGCAATATCCTCCGCCCGGAACCTGAGTAC GGCGGTTCAAAAATCGCCCGCAAGGATATCTCAAAGGTAGAGGGGGTGAT CTTTTTGAAAAGCAAAAATACGCCCCGGGGCGTAGGCTCTTTTTGCACTT AAAAGGCTAAAAAGCCCGGGGGGCTAATTCAGCTGAAGGAATACCGACGA TAACAATACTTAAATGAAAACTAAAGACACCAACGCCAAGAACCGCAACG AATGCCCGAGTCGGCACCGTGAATACACACGAAACGCCCCATGGGGCATG CACCGAACAGCCTGGGAAAAGAACGCCCCGGGGCGTTCTCCGAGGTAGGG GGGGGCGAACTTATATCAAAACAAAAAAGACATACATATGCCCCGGGCTA CATATCTCAAGGTTTTTGTGCTTGTTTCGCGGTTTTGTTTTTTTAGCCCG GGGGGAGAGGGGGGGGGCGGAGCTCAGAGGATATTACGGTACCTCTCAAG TCACTTCAAAAAATGAAAACCTTGCGGATCTCCTTGGATATTCGCGTCAG CTGGCCTTGTGGTGACATGATGTGTAAACTAACCCCTCTTTCCGCTGTAA ACGCCTGCCCCACCTCCAACGCCCAGATCACATCATCGTGCCAACGACAG CCTATAACAGCATGGTGCATGTGAAGGGATGGGCGGAACGGTTCCCGAGG GCGACGTTTTGGGGGTTAGAGGGGGTCAAGCTGCCGGGGGCGAAGTTTAC GAAGGAGTTGACGATGGAGGTGGGTAGAGAAACGGAGACGTGGAATGTAT GGAATCTATATCTATTCGGACTGATGGCATGGCGCGGCAGCGTATTTGGC TTGGCTCGTTCGGTCGGATGGATGGGGGATGGGGTACTTCAAAACTCGAC AGCAGCAGCAGTGCTTTGTTTGAGCCCCGGTACCTACTAGAGCTTTATTC CCAGGCAGAGCGGTGTACTCGTGATATAAGCCGTACATCGCGATCCGGGT GTGCACTTACACCTTGAGCATATGAAGCCGGTGTGCATGGGTGGCGGCAG CGGAGAGAATAGGTAAAAGCATATTCGGAGTATGCCATTCGGCCTCTCAT CTGTATTCTCCCATATCTCATCTGGGTTGCGATTTTTCTTGCCCCACGTA TGTATGTAGCCTCTTATGATCCCTATCCCCACGTCTCTGCTTGTTGCTGT TGCCTTTGTTGACATCTCCCTCTCACCCCCTGGTGCTTGTCTCGATCAAC TTGTTTTGATCAGTCTTTCCCGGAGTCTTGGAAGGCAGAGTTGGACCTAT CCATCCTGGAGGGCAACGATATGTTTCGAGAATGTTTCTTGCTGCACCGG ACCACGAGGAGTGTGTTCGCGTTAGACAGCTTGGTGGAGATGGGGGAAGA AAACATTCCGCACCCTCTCCTGCGAGCGGGCTCCGTGTTGACCGGGAATT TCGGGCGGGTGAGTCGCCACTCTCGCAGTTGTCGGTTATCCTTGGGTCTG TAGCACGCCCCCTACATGTTGTCATTTCCTCTGGTGCCATGCTACCCTTA CGACTAACACCATCGCCCAACATGATAGAGACGGTACATATTTAGGCGTT AGGCGCAACAACAAAAAAACGCTTTTTGTTTCTGGTTTGTGCCGCAAGCT GCTATCGATGTTTTCTGTATTGTTGTTGTCTTCACATTTAAACCGTTCAG ATCTCTATCCAGTATATCTCCATGAGTCCGCACTAATCTAACACTGATGC AGTCGATTCCCGTGGCCACAGGGTAACTTACTCTTAAATGGGTTACTGAA AAAAAGAAAAGAACTAAATAAAATGGACCTTAAATGGATAAGAGCGCATT CACACAGATAATTTTATACTTGGACGTACATATCTCATGTTGTCCTGGTT ATATTTTTGTTGCCTGACAATATTGCTTCTCCTCCCCCTCTCCCCCTCCC AACCGCCATTTAATACTCCCGCGGGACTGAACCATCGTCCCCTCAGCCGG TGTGTCCGACCAAGTCCTTGCTGTGGAACCGCAAGAAGTGCAAGTCGGCG ATATCGAAGGTGCTGGAGTGGGACTTCGACAAGGTTTACGCCACCCATGG GGAGTGCCCGATACAGGACGCCAAGACGGCCATTCGTGACGAGTTCCAGT TTTTGTGGGATTGACTGTAAACTGGACTAACTTGAGGGTGTGATGCGGCA GTGAGGTTCACGCGTAGCGTTTTTGGCGAATGATCATGTTTATTGCGAAA TATACGAACGGTTGCACACACAGTATTTCGCTAGGCGGCCTCCGAGGGTT GTCCTGGGGGCTCGTCTCTCTATCGGCATTTTGCATGTGCCTGGAGTGTT TATTCCGAAGGGTACAACACTTTCATGTGTTTCTGTTGCGATTGATTTCC GTATGTATTGTTGGGCGGAGAGTGGCGAGCTATGGTGACCTGTTGTAGAG GAAAGCGGGTTGTATCTCACACGGTTGCGCTAGGTTTTGCTCAGCGGCCC CCGGGGGGTGCCCTGCGGGCGCGTCTCTTCACGGCATCTTGTACATATGT GTCTGTGTGTAAAGCCATTGTGCTTTGTTCCGGAAGGTACAACACCTGCA TGTGTTTTGCCTGTTGTGATACATTTTCATACATCTATGTTAAGCGGGCG GAGAGTGGCGAACGATTGTGACTTGTTTTAGAGGCAAGCGGGTTGTATCT CACACCTCCACTCAGCTCAGCGATATCACCCGTATTGTATATAGATCTTG GGGTTTGGCTTTTATTCTGGTAGTGGTGGGCCTTGACGTTCCATGGGTGA ATCGCGTGGCGCGGTCGGATCTGTGGTGTTGCGTGTTGTGTTGATGTTGG CGTCTAGACAGTACGGGGGGCTTTTGTACCGAAACTGTGGTCCTCGTGTT ACTCTGCCAACGTTTGTGTGTTGGATTGGTGGATGTGCGTTTGAGTTGTG TTACCGGATATTTTTGACGCCTGCGCTGCTTCGTGTTGGACACTGCATGT ATTGGATGAGGAGGCAATTTCGTGGCAAGACGAGATCGCTGGTGCCATGC ATACCGTGTCAGATTGGGGATGCAATGTACGTTATTTTATTTATTGCGAG AGATTACCTCGTGCTAGCGAAGATCGACCGCGTTGAAGCATGCTATCGTG ACGAGTTCGTGTGTTTGTACAAACTTGCGTATGGGGTTTTTGATGGAACG AGTATGATTTTTTATGTATCATGCAATGGGTCAATATAGAGGACGCACTG TTGTGGAAAGGGATGAATACGGGTAAGGATCGGAGCGACTCGTTTCGTTG AAGCATGGAAACGGTTTATTGAAATCAATTGGCATCTACAGCAGTAAGCG AAACCTATAGTCGCAAAGTGCGGTGTGTTGAGCCGCGCGCGGACTTGTAC GTGGGTCCTGTCTACCGTACAGTGTATTCCGCAGCCAATACGTCGGAGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig562:4937..9835+

>mRNA_L-elsbetiae_contig562.13954.1 ID=mRNA_L-elsbetiae_contig562.13954.1|Name=mRNA_L-elsbetiae_contig562.13954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1242bp|location=Sequence derived from alignment at L-elsbetiae_contig562:4937..9835+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCAACCGGATGGCTGTGTACGCGCTGGCTGACGGGACAGTGCTGGC
TTACAATCCCATTGCACCTACTGAGGAGACCTTGCGTGAGATCAAGGAGT
CCTTCGGATCGCCAGATGTTCAACCGGATGGCTGTGTACGCGCTGGCTGA
CGGGACAGTGCTGGCTTACAATCCCATTGCACCTACTGAGGAGACCTTGC
GTGAGATCAAGGAGTCCTTCGGATCGCCAGATCACATCATCGTGCCAACG
ACAGCCTATAACAGCATGGTGCATGTGAAGGGATGGGCGGAACGGTTCCC
GAGGGCGACGTTTTGGGGGTTAGAGGGGGTCAAGCTGCCGGGGGCGAAGT
TTACGAAGGAGTTGACGATGGAGATCACATCATCGTGCCAACGACAGCCT
ATAACAGCATGGTGCATGTGAAGGGATGGGCGGAACGGTTCCCGAGGGCG
ACGTTTTGGGGGTTAGAGGGGGTCAAGCTGCCGGGGGCGAAGTTTACGAA
GGAGTTGACGATGGAGTCTTTCCCGGAGTCTTGGAAGGCAGAGTTGGACC
TATCCATCCTGGAGGGCAACGATATGTTTCGAGAATGTTTCTTGCTGCAC
CGGACCACGAGGAGTGTGTTCGCGTTAGACAGCTTGGTGGAGATGGGGGA
AGAAAACATTCCGCACCCTCTCCTGCGAGCGGGCTCCGTGTTGACCGGGA
ATTTCGGGCGGTCTTTCCCGGAGTCTTGGAAGGCAGAGTTGGACCTATCC
ATCCTGGAGGGCAACGATATGTTTCGAGAATGTTTCTTGCTGCACCGGAC
CACGAGGAGTGTGTTCGCGTTAGACAGCTTGGTGGAGATGGGGGAAGAAA
ACATTCCGCACCCTCTCCTGCGAGCGGGCTCCGTGTTGACCGGGAATTTC
GGGCGGCCGGTGTGTCCGACCAAGTCCTTGCTGTGGAACCGCAAGAAGTG
CAAGTCGGCGATATCGAAGGTGCTGGAGTGGGACTTCGACAAGGTTTACG
CCACCCATGGGGAGTGCCCGATACAGGACGCCAAGACGGCCATTCGTGAC
GAGTTCCAGTTTTTGTGGGATTGACCGGTGTGTCCGACCAAGTCCTTGCT
GTGGAACCGCAAGAAGTGCAAGTCGGCGATATCGAAGGTGCTGGAGTGGG
ACTTCGACAAGGTTTACGCCACCCATGGGGAGTGCCCGATACAGGACGCC
AAGACGGCCATTCGTGACGAGTTCCAGTTTTTGTGGGATTGA
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