mRNA_L-elsbetiae_contig5615.13950.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5615.13950.1
Unique NamemRNA_L-elsbetiae_contig5615.13950.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 5.310e-129
Identity = 295/557 (52.96%), Postives = 347/557 (62.30%), Query Frame = 1
Query:    4 DLRDLAADSQRLAMAMSSGTPDSQYMVGRLVVDQAPALRTVHRLLLSVTAKL-AGVKARKEELVALTKMCAFVAAASVVVASRQXXXXXXXXXXXXXXXD--------------------------------SEEIKRLLDLGPLEECVGDLELVVERLGRRRKPLLRRSNSSVGKSDIAGLNSRVFDLAREMGLAGVLAVFKGVLEDTGWGGRGYRRGVSSGEILTPQEVTLARQPKPAVRQARVPSKAPPRESWHVRRERIISATLETLLSAGGXXXXXXXXXXXXXXXXXXXXXXIDARKGKGGKAKRLRPRAVGLVGESGSGKTATAAEIVRSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLHNGGXXXXXXXXXXXXEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGG-----------------------ETHGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREAGVKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISFVG 1506
            D+RDLAADSQ+LA+AM+S TPD+QY V RLV D +PA++ +H  LL++TAK+   VK R+EEL+A+ KMC  VAAASVVV S++    XXXXXXXXXX                                  SE + RLLD+GPL ECV  L  +V R   RR+ LLRRS SS  K +IA LN RV D AREMGLAG+LAVFKGVLEDTG G      G+S  ++LT QEV LARQPK +  +ARVPS  P RESWHVRRE +I   L +LLSA G     XXXXXXXXXXXXXXXXX       G       PR VGLVGESG+GKTATAAEIVR P+VLEYFSDGVVWLP++EGDG +D LP+LM RLA+++ EE+G  H  G     XXXXXXX                                                         + HGG R+RR LRCLV  DNVCE  VVA L ETG+WVLLT+ D D++   G KPV +GR+LE DADWVLRRASELP D P PAGA+EL+ELCGR  LD++FVG
Sbjct:   26 DVRDLAADSQKLAIAMASKTPDAQYTVQRLVADHSPAVKGIHESLLAITAKIDLEVKTRREELLAVAKMCTLVAAASVVVVSQEHEQEXXXXXXXXXXEQRHGPSWKGTARSATCGSDNXXXXXXXXXXXXCSERMMRLLDVGPLRECVEALGFLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGIS--DVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXEAG-------PRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGPRQRRPLRCLVAVDNVCEAEVVATLAETGVWVLLTTRDWDVIPRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTVLDLAFVG 573          
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 4.410e-58
Identity = 180/504 (35.71%), Postives = 249/504 (49.40%), Query Frame = 1
Query:   19 AADSQRLAMAMSSGTPDSQYMVGRLVVDQA------PALRTVHRLLLSVTAKLAGVKARKEELVALTKMCAFVAAASVVVASRQXXXXXXXXXXXXXXXDSEEIKRLLDLGPLEECVGDLELVVERLGRRRKPLLRRSNSSVGKSDIAGLNSRVFDLAREMGLAGVLAVFKGVLED-TGWGGR-GYRRGVSSGEILTPQEVTLARQPKPAVRQARVPSKAPPRESWHVRRERIISATLETLLSAGGXXXXXXXXXXXXXXXXXXXXXXIDARKGKGGKAKRLRPRAVGLVGESGSGKTATAAEIVRSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLHNGGXXXXXXXXXXXXEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGGETHGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREAGVKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISFVG 1506
            AA+  +L + M S T DS   +  L  D        P LR V + L ++   +  V+  +EEL  L + C ++ A  VVV SRQ                SE     +DL P+EEC+     +VER G R K + R  N+S  K +IA + + + DL  ++ LAGV A+ +G   D T    R G  +  +   IL   E  + R  K   + A++P   P R+SWHV R  ++    E L + GG                                     P  VGLVG+SGSGKT  A+EIVRS +V + FSDGVVWL ++ G  A+D LP+LM +LA M+ EE+G                      PA S            +DG AY+K  +  G  HGG    + L+CLVVADNV E  VV KL ETGMWVLL++ D ++V  +  + V V  M E +A+ VLR+ASELP +   P  A +L+ELCGR+A+D++FVG
Sbjct:    9 AAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTAC-VVVKSRQSSC-------------SE-----MDLTPVEECLEAAGELVERCGGRGK-MTRVLNASSDKEEIARMKANIRDLEADLSLAGV-AILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGG-------------------------------------PHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHG--AKDRLPSLMLQLAHMMCEEVGGRR-------------------PATS------------DDGAAYIKEKMQRG--HGG----KGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVG 415          
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 9.960e-51
Identity = 154/400 (38.50%), Postives = 199/400 (49.75%), Query Frame = 1
Query:  334 PLEECVGDLELVVERLGRRRKPLLRRSNSSVGKSDIAGLNSRVFDLAREMGLAGVLAV------FKGVLE--DTGWGGRGYRRGVSSGEILTPQEVTLARQPKPAVRQARVPSKAPPRESWHVRRERIISATLETLLSAGGXXXXXXXXXXXXXXXXXXXXXXIDARKGKGGKAKRLRPRAVGLVGESGSGKTATAAEIVRSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLHNGGXXXXXXXXXXXXEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGGETHGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREA-GVKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISFVG 1506
            PL ECV  +   VER  RR   L R   ++  K +IAGL  R+ DL  ++ LAG+  V       K +LE  DT       ++ +S  + L   ++  AR        A VP+  P R+SWHV R  ++ A  + L   GG                                     PR VGLVG+SGSGKT  AAEIVRS +V E FSDG+VWL ++  DGA + L ALM  LA++V E+IG                       +    P G D      DG AY +  +  G  HGG    + L+CLVVADNV E  V++KL ETGMWVLL++ D  +VR A G   V V  + E DA  VLRRASEL  +   P  A ELVELCGR+A+D++FVG
Sbjct:   79 PLMECVNAVGAFVERCSRRGM-LSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDT-------KQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGG-------------------------------------PRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVN--DGATERLRALMMHLARVVFEDIGG----------------------SVGRRPAGLD------DGAAYTRQRMQSG--HGG----KGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVG 397          
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 6.090e-50
Identity = 147/399 (36.84%), Postives = 204/399 (51.13%), Query Frame = 1
Query:  310 IKRLLDLGPLEECVGDLELVVERLGRRRKPLLRRSNSSVGKSDIAGLNSRVFDLAREMGLAGVLAVFKGVLEDTGWGGRGYRRGVSSGEILTPQEVTLARQPKPAVRQARVPSKAPPRESWHVRRERIISATLETLLSAGGXXXXXXXXXXXXXXXXXXXXXXIDARKGKGGKAKRLRPRAVGLVGESGSGKTATAAEIVRSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLHNGGXXXXXXXXXXXXEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGGETHGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREAGVKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISFVG 1506
            I+  +D+ PL++CV   +   ER  RR K + R   +   KS+IAGLNS V  L  ++GLAG+ AV +G ++D               + L   +  L   P+   + A VP  AP R+SWHV R   ++  L+ L  +                                      R   V L G SGSGKT  AAEIVRS +V E FSDG+VWLP++EG  A+  LP+LM +LA+MV EEIG                     +P+ S            ED   Y+K  +   E H G    R L+CLVVADNV E  VV+KL ETGMWVLL++ D  +V+ +  K V V  + +ADA+ VL+RA+ELP ++  P  A +L++LCGR+A+D++FVG
Sbjct:   85 IESEVDVAPLKDCVEAAKNFAERCSRRGK-VSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGI-AVLEGKVDDMK-------------KTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSD-------------------------------------RACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEG--AKKRLPSLMLQLARMVHEEIGG----------------SVGRVPSAS------------EDSATYIKQRLE--EGHKG----RRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVG 395          
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 2.380e-40
Identity = 103/221 (46.61%), Postives = 135/221 (61.09%), Query Frame = 1
Query:  844 PRAVGLVGESGSGKTATAAEIVRSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLHNGGXXXXXXXXXXXXEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGGETHGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREAGVKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISFVG 1506
            P  VGLVG+SG+GKT  A+ IV S  V E FSDG+VWLP++EG    D LP LM +LA+MV E+IG                       +    P G D      DG AYVK  V  G  HGG    + L+CLVVADNV E  VV++L ETGMW+LL++ D ++V+ A  + V V  + EA+A+ VLRRA+EL  +A  P  AK+L+ELCGR+A+D++FVG
Sbjct:  234 PHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEG--VHDNLPCLMLQLAQMVFEDIGG----------------------SVGRRPSGSD------DGLAYVKQQVENG--HGG----KGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVG 418          
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 2.970e-36
Identity = 98/221 (44.34%), Postives = 132/221 (59.73%), Query Frame = 1
Query:  844 PRAVGLVGESGSGKTATAAEIVRSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLHNGGXXXXXXXXXXXXEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGGETHGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREAGVKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISFVG 1506
            PR VGLVG SGSGKT  A+E VRS +V E FSDG+ WL ++  DGA++ L +LM +LA++V E+IG                       +    P   D      D  AY++  +  G   GG    ++L+CLVVADNV E  VV+KL ETGMWVLL++ ++ +V EA  + V V  + EADA  VLRRA+ELP     P  A +L+ELCGR+A+D++FVG
Sbjct:   67 PRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVN--DGAKERLSSLMLQLARVVYEDIGC----------------------SVGRRPTSSD------DCAAYIRQRMKKGT--GG----KKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVG 251          
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.350e-32
Identity = 94/221 (42.53%), Postives = 127/221 (57.47%), Query Frame = 1
Query:  844 PRAVGLVGESGSGKTATAAEIVRSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLHNGGXXXXXXXXXXXXEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGGETHGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREAGVKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISFVG 1506
            PR VGLVG+SG+GKT  AAE+VRS  V E FSDG+VWL ++ G  A   LP+LM +LA+MV E+IG    G                           + +GG  D  AY+K  +  G  HGG    + L+CL VADNV E  VV+ L +TGM VLL++   ++V  A   PV +  +   DA+ VLR A+ELP     P  A +L++LCGR+A+D++FVG
Sbjct:  131 PRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYG--ANKRLPSLMLQLARMVQEDIGGRVGGHP-------------------------NESGGNAD--AYIKQRMENG--HGG----KGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVG 316          
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 4.570e-29
Identity = 105/309 (33.98%), Postives = 143/309 (46.28%), Query Frame = 1
Query:  634 ARVPSKAPPRESWHVRRERIISATLETLLSAGGXXXXXXXXXXXXXXXXXXXXXXIDARKGKGGKAKRLRPRAVGLVGESGSGKTATAAEIV------------------RSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLHNGGXXXXXXXXXXXXEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGGETHGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREAGVKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISFVG 1506
            A VP+  P   SWHV R+R++ A  E L S G                                      P+ VGLVG SGSGKT  AA IV                  R   V E+F DGVVWL +  G G+ + +PALM +LAK V E++   H+ G                  F+P   G    GG   G A++   V G  +  G +R     CLVVAD+V E  ++ +LR TGMWVL TS D D+V       V V ++ +A+A+ +LR A+EL + +  P+ A +++E C RMA  + FVG
Sbjct:  220 AAVPNGKPVEHSWHVARDRVVDAVYEHL-SCGQT------------------------------------PQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLK--HSYG------------------FAP---GASPTGG---GSAFISDFVRGKGSAAGRKR-----CLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVG 460          
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Match: D7G330_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G330_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 3.480e-25
Identity = 103/337 (30.56%), Postives = 142/337 (42.14%), Query Frame = 1
Query:  562 VSSGEILTPQ--EVTLARQPKPAVRQARVPSKAPPRESWHVRRERIISATLETLLSAGGXXXXXXXXXXXXXXXXXXXXXXIDARKGKGGKAKRLRPRAVGLVGESGSGKTATAAEIV--------------------RSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLHNGGXXXXXXXXXXXXEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGGETHGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREAGVKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISFVG 1506
            V  G ++  Q  E+    QP+P +  A VP   P  +SWH  R+ ++    + L   GG                                     P    L G SG+GKT  AA +V                    R   +   FSDGVVWL + +G G  D LP LM +LAK + EE+   +  G                P               EDG +YVK +V           +  L+C VVAD+V EP VV KLRETGMW+LLT+ +  MV     + V V R+ + +A  VLR A+ LP        A +++E+CG +A+DI+FVG
Sbjct:  141 VEVGNLMQQQVGEILARLQPRPKL--APVPPGVPMGQSWHTMRDGVVDRVYDILGGDGG-------------------------------------PAVAALGGRSGAGKTTAAAAMVGERQGPIHPLARENEEQAGTRLDRLRARFSDGVVWLRVGKGAGVADRLPLLMRKLAKALHEEVLKSYVDG----------------PGIG------------EDGESYVKKIV----------EQESLKCRVVADDVWEPPVVEKLRETGMWILLTARNPSMVEPN--ERVFVDRLEKMEAQNVLRGAARLPPGQSLCDVAMKVLEVCGYVAMDIAFVG 398          
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 7.350e-24
Identity = 86/221 (38.91%), Postives = 113/221 (51.13%), Query Frame = 1
Query:  844 PRAVGLVGESGSGKTATAAEIVRSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLHNGGXXXXXXXXXXXXEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGGETHGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREAGVKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISFVG 1506
            P  VGLVG+SGSGKT  A+EIVRS +                     D LP+LM +LA MV EEIG                      PA S            +DG AY+K  +  G  HGG      L+CL V DNV E  VV +L E GMWVLL++ D ++V     + V V  + E +A+ VLR+A+ELP +   P  A +L+ELCGR+A+D++F G
Sbjct:  208 PPLVGLVGDSGSGKTTAASEIVRSNE---------------------DRLPSLMLQLAHMVYEEIGGRR-------------------PATS------------DDGTAYIKERMHRG--HGG----EGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGG 370          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5615.13950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5L0N2_9PHAE5.310e-12952.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZY7_ECTSI4.410e-5835.71NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KLK9_9PHAE9.960e-5138.50NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7FZW8_ECTSI6.090e-5036.84NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KRK8_9PHAE2.380e-4046.61NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KYW3_9PHAE2.970e-3644.34NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5J759_9PHAE1.350e-3242.53NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LFN6_ECTSI4.570e-2933.98NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G330_ECTSI3.480e-2530.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ30_9PHAE7.350e-2438.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5615contigL-elsbetiae_contig5615:2394..4264 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score224.9
Seed ortholog evalue8.2e-56
Seed eggNOG ortholog2880.D7FZX2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-06_007420.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons2
Model size1506
Cds size1506
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816596.569234-CDS-L-elsbetiae_contig5615:2393..33771622816596.569234-CDS-L-elsbetiae_contig5615:2393..3377Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5615 2394..3377 -
1691683673.2973914-CDS-L-elsbetiae_contig5615:2393..33771691683673.2973914-CDS-L-elsbetiae_contig5615:2393..3377Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5615 2394..3377 -
1622816596.5818398-CDS-L-elsbetiae_contig5615:3742..42641622816596.5818398-CDS-L-elsbetiae_contig5615:3742..4264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5615 3743..4264 -
1691683673.3098586-CDS-L-elsbetiae_contig5615:3742..42641691683673.3098586-CDS-L-elsbetiae_contig5615:3742..4264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5615 3743..4264 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5615.13950.1prot_L-elsbetiae_contig5615.13950.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5615 2394..4264 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5615.13950.1

>prot_L-elsbetiae_contig5615.13950.1 ID=prot_L-elsbetiae_contig5615.13950.1|Name=mRNA_L-elsbetiae_contig5615.13950.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=502bp
MDLRDLAADSQRLAMAMSSGTPDSQYMVGRLVVDQAPALRTVHRLLLSVT
AKLAGVKARKEELVALTKMCAFVAAASVVVASRQRQRRPVGSGSGSGGGD
SEEIKRLLDLGPLEECVGDLELVVERLGRRRKPLLRRSNSSVGKSDIAGL
NSRVFDLAREMGLAGVLAVFKGVLEDTGWGGRGYRRGVSSGEILTPQEVT
LARQPKPAVRQARVPSKAPPRESWHVRRERIISATLETLLSAGGGGGGGG
GGGEGSGGDGGGGGGGIDARKGKGGKAKRLRPRAVGLVGESGSGKTATAA
EIVRSPDVLEYFSDGVVWLPISEGDGAQDCLPALMHRLAKMVSEEIGSLH
NGGGGGGGGGAAAEAEAPIPAFSPAPEGRDINGGPEDGGAYVKGLVTGGE
THGGVRRRRELRCLVVADNVCEPTVVAKLRETGMWVLLTSCDVDMVREAG
VKPVAVGRMLEADADWVLRRASELPSDAPSPAGAKELVELCGRMALDISF
VG
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mRNA from alignment at L-elsbetiae_contig5615:2394..4264-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5615.13950.1 ID=mRNA_L-elsbetiae_contig5615.13950.1|Name=mRNA_L-elsbetiae_contig5615.13950.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1871bp|location=Sequence derived from alignment at L-elsbetiae_contig5615:2394..4264- (Laminarionema elsbetiae ELsaHSoW15)
ATGGATTTACGGGACCTAGCGGCGGACTCTCAGCGGCTGGCGATGGCGAT GAGCTCGGGCACCCCGGACTCTCAGTACATGGTCGGGCGACTGGTGGTAG ACCAGGCCCCCGCCCTCAGGACGGTCCACCGTCTCCTCCTGTCTGTCACG GCGAAGCTCGCCGGGGTCAAGGCGAGAAAGGAGGAGTTGGTCGCCCTGAC CAAGATGTGCGCCTTCGTGGCCGCCGCTTCCGTGGTCGTCGCGTCTCGGC AGCGGCAGCGGCGGCCGGTCGGCAGCGGCAGCGGCAGCGGCGGCGGCGAC AGCGAGGAGATAAAGAGGCTGCTGGACCTCGGCCCGCTCGAGGAGTGCGT CGGCGATCTCGAGCTCGTCGTGGAGAGGCTCGGGCGACGCCGAAAACCGC TCCTGAGGAGGTCCAACAGCAGCGTCGGCAAGAGCGACATCGCCGGCCTC AACAGCCGAGTTTTTGACCTCGCGAGGGAGATGGGCCTCGCGGGAGTCCT GGCCGTGTTCAAGGGCGTATTGGTGAGGAAATTGCACCGTTTCGAACCTC GTACAATACATACCTAGAAAATAAAGAAATCCGTTGTTAGTTCACGTAAA CAATATACTAAATATGTAGTGTACCCCCCTTCGTTACAGGATTATTTTCT AGATCCAAGGTTTCCGCCATTTTTGCCAAACGCCATCGCGCACAAAGCCA AAAGCCGTGGCACTTGTGTCGGGGTTTGGCCTGCTGACGACGGTGGCTAC AATTTGTACGATATGTAGCACCCCCCGAGCCTTTGATACTTGGATCGTAT GCTTTGACGCCTTTTTGCCTGATTCGAATTCACCTCTTGTCAAACGCTCT CACCTGGCGCCCTCCAATGTCTCTCCCCGGGCCGCAGGAGGACACCGGCT GGGGCGGCCGAGGCTACCGCAGGGGCGTCAGCAGCGGCGAAATCCTCACC CCGCAAGAGGTGACCCTGGCGCGACAGCCCAAGCCCGCCGTCCGGCAAGC CCGCGTGCCCTCGAAAGCCCCGCCGCGAGAGAGCTGGCACGTCAGGCGCG AGCGCATCATCAGCGCGACCCTCGAGACCCTGCTCTCCGCCGGAGGAGGA GGAGGAGGAGGAGGAGGAGGAGGAGAAGGAAGCGGCGGCGATGGCGGCGG CGGTGGCGGCGGCATCGACGCCCGCAAGGGTAAGGGTGGCAAGGCGAAGA GGTTGCGCCCCCGCGCGGTCGGCCTCGTGGGCGAGAGCGGGTCCGGCAAG ACCGCCACCGCGGCGGAGATCGTTCGGAGCCCCGACGTGCTCGAGTATTT CTCGGACGGGGTCGTCTGGCTACCTATCAGCGAGGGCGACGGCGCGCAGG ACTGCCTCCCGGCCTTGATGCACCGGCTGGCCAAGATGGTTAGCGAGGAG ATTGGTAGCCTGCATAATGGCGGCGGCGGCGGCGGCGGCGGCGGTGCAGC GGCAGAAGCGGAAGCCCCCATCCCCGCCTTTTCGCCCGCCCCCGAGGGGC GAGACATCAACGGCGGTCCGGAAGATGGCGGGGCCTACGTCAAAGGTCTC GTGACAGGTGGCGAGACCCACGGCGGGGTGCGGCGGCGGCGGGAGCTGCG GTGCCTGGTGGTGGCGGACAACGTCTGCGAGCCCACCGTCGTGGCGAAGC TTCGGGAAACCGGCATGTGGGTTCTCCTGACCAGCTGCGACGTGGACATG GTGCGGGAAGCCGGCGTCAAGCCGGTAGCGGTGGGAAGAATGCTCGAAGC GGACGCGGACTGGGTCTTGAGGAGGGCGTCGGAGCTCCCCTCGGACGCTC CCTCGCCGGCGGGGGCGAAGGAGCTGGTCGAGCTCTGCGGCCGAATGGCG CTGGATATCTCGTTCGTGGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5615:2394..4264-

>mRNA_L-elsbetiae_contig5615.13950.1 ID=mRNA_L-elsbetiae_contig5615.13950.1|Name=mRNA_L-elsbetiae_contig5615.13950.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3012bp|location=Sequence derived from alignment at L-elsbetiae_contig5615:2394..4264- (Laminarionema elsbetiae ELsaHSoW15)
ATGGATTTACGGGACCTAGCGGCGGACTCTCAGCGGCTGGCGATGGCGAT
GAGCTCGGGCACCCCGGACTCTCAGTACATGGTCGGGCGACTGGTGGTAG
ACCAGGCCCCCGCCCTCAGGACGGTCCACCGTCTCCTCCTGTCTGTCACG
GCGAAGCTCGCCGGGGTCAAGGCGAGAAAGGAGGAGTTGGTCGCCCTGAC
CAAGATGTGCGCCTTCGTGGCCGCCGCTTCCGTGGTCGTCGCGTCTCGGC
AGCGGCAGCGGCGGCCGGTCGGCAGCGGCAGCGGCAGCGGCGGCGGCGAC
AGCGAGGAGATAAAGAGGCTGCTGGACCTCGGCCCGCTCGAGGAGTGCGT
CGGCGATCTCGAGCTCGTCGTGGAGAGGCTCGGGCGACGCCGAAAACCGC
TCCTGAGGAGGTCCAACAGCAGCGTCGGCAAGAGCGACATCGCCGGCCTC
AACAGCCGAGTTTTTGACCTCGCGAGGGAGATGGGCCTCGCGGGAGTCCT
GGCCGTGTTCAAGGGCGTATTGATGGATTTACGGGACCTAGCGGCGGACT
CTCAGCGGCTGGCGATGGCGATGAGCTCGGGCACCCCGGACTCTCAGTAC
ATGGTCGGGCGACTGGTGGTAGACCAGGCCCCCGCCCTCAGGACGGTCCA
CCGTCTCCTCCTGTCTGTCACGGCGAAGCTCGCCGGGGTCAAGGCGAGAA
AGGAGGAGTTGGTCGCCCTGACCAAGATGTGCGCCTTCGTGGCCGCCGCT
TCCGTGGTCGTCGCGTCTCGGCAGCGGCAGCGGCGGCCGGTCGGCAGCGG
CAGCGGCAGCGGCGGCGGCGACAGCGAGGAGATAAAGAGGCTGCTGGACC
TCGGCCCGCTCGAGGAGTGCGTCGGCGATCTCGAGCTCGTCGTGGAGAGG
CTCGGGCGACGCCGAAAACCGCTCCTGAGGAGGTCCAACAGCAGCGTCGG
CAAGAGCGACATCGCCGGCCTCAACAGCCGAGTTTTTGACCTCGCGAGGG
AGATGGGCCTCGCGGGAGTCCTGGCCGTGTTCAAGGGCGTATTGGAGGAC
ACCGGCTGGGGCGGCCGAGGCTACCGCAGGGGCGTCAGCAGCGGCGAAAT
CCTCACCCCGCAAGAGGTGACCCTGGCGCGACAGCCCAAGCCCGCCGTCC
GGCAAGCCCGCGTGCCCTCGAAAGCCCCGCCGCGAGAGAGCTGGCACGTC
AGGCGCGAGCGCATCATCAGCGCGACCCTCGAGACCCTGCTCTCCGCCGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAAGCGGCGGCGATG
GCGGCGGCGGTGGCGGCGGCATCGACGCCCGCAAGGGTAAGGGTGGCAAG
GCGAAGAGGTTGCGCCCCCGCGCGGTCGGCCTCGTGGGCGAGAGCGGGTC
CGGCAAGACCGCCACCGCGGCGGAGATCGTTCGGAGCCCCGACGTGCTCG
AGTATTTCTCGGACGGGGTCGTCTGGCTACCTATCAGCGAGGGCGACGGC
GCGCAGGACTGCCTCCCGGCCTTGATGCACCGGCTGGCCAAGATGGTTAG
CGAGGAGATTGGTAGCCTGCATAATGGCGGCGGCGGCGGCGGCGGCGGCG
GTGCAGCGGCAGAAGCGGAAGCCCCCATCCCCGCCTTTTCGCCCGCCCCC
GAGGGGCGAGACATCAACGGCGGTCCGGAAGATGGCGGGGCCTACGTCAA
AGGTCTCGTGACAGGTGGCGAGACCCACGGCGGGGTGCGGCGGCGGCGGG
AGCTGCGGTGCCTGGTGGTGGCGGACAACGTCTGCGAGCCCACCGTCGTG
GCGAAGCTTCGGGAAACCGGCATGTGGGTTCTCCTGACCAGCTGCGACGT
GGACATGGTGCGGGAAGCCGGCGTCAAGCCGGTAGCGGTGGGAAGAATGC
TCGAAGCGGACGCGGACTGGGTCTTGAGGAGGGCGTCGGAGCTCCCCTCG
GACGCTCCCTCGCCGGCGGGGGCGAAGGAGCTGGTCGAGCTCTGCGGCCG
AATGGCGCTGGATATCTCGTTCGTGGGCGAGGACACCGGCTGGGGCGGCC
GAGGCTACCGCAGGGGCGTCAGCAGCGGCGAAATCCTCACCCCGCAAGAG
GTGACCCTGGCGCGACAGCCCAAGCCCGCCGTCCGGCAAGCCCGCGTGCC
CTCGAAAGCCCCGCCGCGAGAGAGCTGGCACGTCAGGCGCGAGCGCATCA
TCAGCGCGACCCTCGAGACCCTGCTCTCCGCCGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGAAGGAAGCGGCGGCGATGGCGGCGGCGGTGGCGG
CGGCATCGACGCCCGCAAGGGTAAGGGTGGCAAGGCGAAGAGGTTGCGCC
CCCGCGCGGTCGGCCTCGTGGGCGAGAGCGGGTCCGGCAAGACCGCCACC
GCGGCGGAGATCGTTCGGAGCCCCGACGTGCTCGAGTATTTCTCGGACGG
GGTCGTCTGGCTACCTATCAGCGAGGGCGACGGCGCGCAGGACTGCCTCC
CGGCCTTGATGCACCGGCTGGCCAAGATGGTTAGCGAGGAGATTGGTAGC
CTGCATAATGGCGGCGGCGGCGGCGGCGGCGGCGGTGCAGCGGCAGAAGC
GGAAGCCCCCATCCCCGCCTTTTCGCCCGCCCCCGAGGGGCGAGACATCA
ACGGCGGTCCGGAAGATGGCGGGGCCTACGTCAAAGGTCTCGTGACAGGT
GGCGAGACCCACGGCGGGGTGCGGCGGCGGCGGGAGCTGCGGTGCCTGGT
GGTGGCGGACAACGTCTGCGAGCCCACCGTCGTGGCGAAGCTTCGGGAAA
CCGGCATGTGGGTTCTCCTGACCAGCTGCGACGTGGACATGGTGCGGGAA
GCCGGCGTCAAGCCGGTAGCGGTGGGAAGAATGCTCGAAGCGGACGCGGA
CTGGGTCTTGAGGAGGGCGTCGGAGCTCCCCTCGGACGCTCCCTCGCCGG
CGGGGGCGAAGGAGCTGGTCGAGCTCTGCGGCCGAATGGCGCTGGATATC
TCGTTCGTGGGC
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