mRNA_L-elsbetiae_contig560.13923.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE) HSP 1 Score: 305 bits (782), Expect = 5.050e-95 Identity = 144/189 (76.19%), Postives = 157/189 (83.07%), Query Frame = 3 Query: 795 QDECGDWVTALCPYGEDGCPDNKGDFDIVFPEPMNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTSPALGDVAEACNEYTVEFDYDNG--SSSDRFSIDLYTSDGTGDCGTYVTSICDKETIGCRDSGGDYDVEIPCGTPAGEYSIRVGRFEDDSLYGCSAPFMVIEDEDS 1355 +D+CGDWVTALCPYGEDGCPDN+GD+DIV PEPM G SG GYKVRV DI DE DADCSDEF+LLAS+EAP VGD DGP+L VTSPA GD+A C EYTVEFDYDNG SS DRF+IDLY +DG GDCGTYV SICDK TIGC+DS GDYDVEIPC T AGEY IRV RFEDDSLY CS F + E +DS Sbjct: 63 EDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTIEEGDDS 251
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI) HSP 1 Score: 278 bits (711), Expect = 1.040e-84 Identity = 129/190 (67.89%), Postives = 149/190 (78.42%), Query Frame = 3 Query: 795 QDECGDWVTALCPYGEDGCPDNKGDFDIVFPEPMNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTSPALGDVAEACNEYTVEFDYDNGSSS--DRFSIDLYTSDGTGDCGTYVTSICDKETIGCRDSGGDYDVEIPCGTPAGEYSIRVGRFEDDSLYGCSAPFMVIEDEDSA 1358 +D CGDWVTALCPYGE+GCPDN+GD+DIV PEPM+G+S GYKVRV+D+ DE DCSD F+L+AS +AP G G L VTSPA GD AEA EYTVEFDYDNG S DRFSIDLY +DG GDCGTYVTSICDK +IGC+DS GDYDVEIP T AG+Y IRVGRFED+ LYGCS F ++ +D + Sbjct: 62 EDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMGGDDES 251
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI) HSP 1 Score: 278 bits (710), Expect = 2.730e-84 Identity = 129/192 (67.19%), Postives = 153/192 (79.69%), Query Frame = 3 Query: 795 QDECGDWVTALCPYGEDGCPDNKGDFDIVFPEPMNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTSPALGDVAEACNEYTVEFDYDNG--SSSDRFSIDLYTSDGTGDCGTYVTSICDKETIGCRDSGGDYDVEIPCGTPAGEYSIRVGRFEDDSLYGCSAPFMVIEDEDSASD 1364 +DECGDWVTALCPYGEDGCPDN+GD+DIV PEPM+G SG GYKVRV D+DD+ DCSDEF+L+A EAP GDA GP + VTSP+ GD AEA EYTVEFDYDNG SS RF+IDLY++ G+GDCGT++ ++CDK TIGC+DS GDYDVEIP AG Y+IRVG FEDDS+YGCS F ++ +DS D Sbjct: 51 EDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILGADDSPDD 242
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE) HSP 1 Score: 271 bits (694), Expect = 3.480e-82 Identity = 125/190 (65.79%), Postives = 152/190 (80.00%), Query Frame = 3 Query: 795 QDECGDWVTALCPYGEDGCPDNKGDFDIVFPEPMNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTSPALGDVAEACNEYTVEFDYDNG--SSSDRFSIDLYTSDGTGDCGTYVTSICDKETIGCRDSGGDYDVEIPCGTPAGEYSIRVGRFEDDSLYGCSAPFMVIEDEDSA 1358 +DECG+WVTALCPYGEDGCPDN+GD+DIV PEPM+G SG GYKVRV D+DDE +DCSDEF+L+A +AP DA GP + VTSP+ GD AEA EYTVEFDYDNG SS RF+IDLY + G+GDCGT++ ++CDK TIGC+DS GDYDVEIP AG Y+IRVG FED+S+YGCS F ++ +DS+ Sbjct: 64 EDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILGADDSS 253
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Match: A0A6H5JEJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ8_9PHAE) HSP 1 Score: 273 bits (697), Expect = 1.670e-79 Identity = 127/184 (69.02%), Postives = 147/184 (79.89%), Query Frame = 3 Query: 795 QDECGDWVTALCPYGEDGCPDNKGDFDIVFPEPMNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTSPALGDVAEACNEYTVEFDYDNGSSS--DRFSIDLYTSDGTGDCGTYVTSICDKETIGCRDSGGDYDVEIPCGTPAGEYSIRVGRFEDDSLYGCSAPFMVI 1340 +DECG+WVTALCPYG +GCPDN+GD+DIV PEPM+G SG GYKVRV D+D DADCSDEF+L+AS EAP VG D P L+VTSP+ GD A+A EYTVEFDYDNG S DRF IDLY+ GTGDCGT+V ++CDKE IGC+DS GDYDVEIP G YSIRVGRFEDD+LYGCS F ++ Sbjct: 13 EDECGEWVTALCPYGSEGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDGPQDADCSDEFYLMASAEAPVVGGPDAPYLMVTSPSAGDKAQAGGEYTVEFDYDNGVGSRVDRFKIDLYSIGGTGDCGTWVMNLCDKEAIGCKDSMGDYDVEIPETVVDGMYSIRVGRFEDDALYGCSGEFEIV 196
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI) HSP 1 Score: 247 bits (630), Expect = 6.480e-73 Identity = 121/187 (64.71%), Postives = 142/187 (75.94%), Query Frame = 3 Query: 795 QDECGDWVTALCPYGEDGCPDNKGDFDIVFPEPMNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTSPALGDVAEACNEYTVEFDYDNG--SSSDRFSIDLYTSDGTGDCGTYVTSICDKETIGCRDSGGDYDVEIPCGTPAGEYSIRVGRFEDDSLYGCSAPFMVIEDE 1349 +DECGDWVTALCPYG+DGCPD +GD+D+V PEPM+G S G YKV V D DE D CS +F L+AS EAP D G + VTSP+ GD A A EYTVEFDYDNG SS +RF+IDLY+S G+GDCGTYVT+ICDK +IGC+DS GDYDV IP GT +G YSIRVG FEDD +YGCS F ++ E Sbjct: 62 EDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSG-YKVMVTDSSDESDYGCSGDFTLIASTEAPDATDM-GAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVGGE 246
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI) HSP 1 Score: 246 bits (627), Expect = 1.320e-72 Identity = 119/176 (67.61%), Postives = 137/176 (77.84%), Query Frame = 3 Query: 795 QDECGDWVTALCPYGEDGCPDNKGDFDIVFPEPMNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTSPALGDVAEACNEYTVEFDYDNGSSS--DRFSIDLYTSDGTGDCGTYVTSICDKETIGCRDSG----GDYDVEIPCGTPAGEYSIRVGRFEDD 1304 +D+CGDWVTALCPYGEDGCPDN+GD+DIV PEPM+G SG GYKVRV DI DE DADCSDEF+L+AS+EAP VGD DGP+L VTSPA GD+A C EYTVEFDYDNG S DRF+IDLY +DG GDCGTYV SICDK TIGC+DS G + V+ G G +S+ V R+ D Sbjct: 64 EDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCKDSNPVRRGRWRVQDSGGPLRGRFSLLVLRYLHD 239
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE) HSP 1 Score: 237 bits (605), Expect = 2.960e-69 Identity = 116/187 (62.03%), Postives = 141/187 (75.40%), Query Frame = 3 Query: 798 DECGDWVTALCPYGEDGCPDNKGDFDIVFPEPMNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTSPALGDVAEACNEYTVEFDYDNG--SSSDRFSIDLYTSDGTGDCGTYVTSICDKETIGCRDSGGDYDVEIPCGTPAGEYSIRVGRFEDDSLYGCSAPFMVIEDED 1352 D CGDWVTALCPYG DGCPD+ GD+DI+ PEPM+G S G YKV V + +DE D CSD+F L+AS +AP+ G+ G SL VTSP+ GD A A YTVE+DY+NG SS+DRF++DLY GTGDCGTYVT++CD+ +IGC DS GDYDVEIP TPAG YSIRVG F+D+ +Y CS F V +D Sbjct: 63 DVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSG-YKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEM-GYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEVDTSDD 247
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Match: A0A6H5KR87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR87_9PHAE) HSP 1 Score: 234 bits (597), Expect = 6.020e-69 Identity = 115/192 (59.90%), Postives = 139/192 (72.40%), Query Frame = 3 Query: 795 QDECGDWVTALCPYGEDGCPDNKGDFDIVFPEPMNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTSPALGDVAEACNEYTVEFDYDNG--SSSDRFSIDLYT-SDGTGDCGTYVTSICDKETIGCRDSGGDYDVEIPCGTPAGEYSIRVGRFEDDSLYGCSAPFMVIEDEDSAS 1361 +D+CGDWVTALCPYG DGCPD +GD+DIV PEPM+G S G YK+ V D +DE CS +F L+AS +AP G+ G SL V SP+ GD+A A YTVE+DY+NG SS DRF+IDLYT GTGDCGTYV ++CDK TIGC DS GDYDVEIP TPAG YS+RVG F D+ ++ CS F ++ D S Sbjct: 2 EDDCGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSG-YKIMVTDSNDESSMGCSGDFTLVASTDAPAAGEV-GYSLTVNSPSDGDIAMAGEVYTVEWDYNNGLGSSKDRFAIDLYTYGTGTGDCGTYVATLCDKPTIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDEIMFDCSEAFEIVNDSTDLS 191
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI) HSP 1 Score: 234 bits (596), Expect = 5.960e-68 Identity = 117/192 (60.94%), Postives = 139/192 (72.40%), Query Frame = 3 Query: 795 QDECGDWVTALCPYGEDGCPDNKGDFDIVFPEPMNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTSPALGDVAEACNEYTVEFDYDNG--SSSDRFSIDLYT-SDGTGDCGTYVTSICDKETIGCRDSGGDYDVEIPCGTPAGEYSIRVGRFEDDSLYGCSAPFMVIEDEDSAS 1361 +DECGDWVTALCPYG DGCPD +GD+DIV PEPM G S G YKV V D +DE CS +F L+AS +AP G+ G SL VTSP+ GD A A YTVE+DY+NG SS+DRF+IDLY+ GTGDCGTYV ++CDK +IGC DS GDYDVEIP TPAG YS+RVG F DD ++ CS F ++ D S Sbjct: 62 EDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSSG-YKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEV-GYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIVNDRTDMS 251 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig560.13923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig560.13923.1 >prot_L-elsbetiae_contig560.13923.1 ID=prot_L-elsbetiae_contig560.13923.1|Name=mRNA_L-elsbetiae_contig560.13923.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp MNGKSGGGYKVRVVDIDDEPDADCSDEFFLLASNEAPQVGDADGPSLVVTback to top mRNA from alignment at L-elsbetiae_contig560:685..3937- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig560.13923.1 ID=mRNA_L-elsbetiae_contig560.13923.1|Name=mRNA_L-elsbetiae_contig560.13923.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3253bp|location=Sequence derived from alignment at L-elsbetiae_contig560:685..3937- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig560:685..3937- >mRNA_L-elsbetiae_contig560.13923.1 ID=mRNA_L-elsbetiae_contig560.13923.1|Name=mRNA_L-elsbetiae_contig560.13923.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1182bp|location=Sequence derived from alignment at L-elsbetiae_contig560:685..3937- (Laminarionema elsbetiae ELsaHSoW15)back to top |