mRNA_L-elsbetiae_contig5596.13915.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Match: D7FNG9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG9_ECTSI) HSP 1 Score: 375 bits (962), Expect = 4.570e-126 Identity = 212/331 (64.05%), Postives = 244/331 (73.72%), Query Frame = 1 Query: 1 MTSLDFQSLLKQEKALRQAELEQQHAQDKKIDSLEADNTAR----------------QAKVVAKPRHDDQTEPSPWFVELAERPVLEMDKARFQYMRVGDTPTIFYVPDFISEADEQQILARTYATDVRANASNEWVSLRTRRLKCWGGQPGESFRPEPLPPWVKALCDSLVIRGVFAEENRPNHVLLNEYQPGQGIMAHTDGPFYQPRTATLSLGSDAVMHFSPRLAPADVGRPGVESRPQASLVLRARCLVVFADEAYSNQLHSIDAVGEETVG---SASD-----GGSGSGRAPVINTEAAEMPEGTLLRRKLRVSLTFRRI-SADAG 918 MTSLDFQSLLKQEKAL++ +L AQ + +++ ++KVV EPSP V+LA RP L+M+K MRVG+TP+IFYVPDFIS ADEQQ+L R +A +SNEWV+LR+RRLKCWGGQPGESFRPEPLPPWV ALC+SLV+RGVF+EE RPNHVLLNEYQPGQGIMAHTDGPFY+PRTATLSLGSDAVMHFSPR+ + +GRPGVE+RPQASLVLRA LVVFAD+AYS LHSIDAV EETVG S+ D GG G APVIN AA PEGT+LRRKLRVSLTFRR+ +AD G Sbjct: 1 MTSLDFQSLLKQEKALQRVQL----AQSTRTTAVQXXXXXXXXXXXXXXXXXXXXXXESKVVGT------KEPSPLLVKLAGRPSLDMEK-----MRVGNTPSIFYVPDFISGADEQQLLERIHAQA----SSNEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCGGSSGDVGKRGGGGVGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRVRAADRG 312
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Match: A0A7S2G6U9_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U9_9STRA) HSP 1 Score: 202 bits (515), Expect = 9.550e-57 Identity = 108/216 (50.00%), Postives = 143/216 (66.20%), Query Frame = 1 Query: 259 TIFYVPDFISEADEQQILARTYATDVRANASNEWVSLRTRRLKCWGGQPGESFRPEPLPPWVKALCDSLVIRGVFAEENRPNHVLLNEYQPGQGIMAHTDGPFYQPRTATLSLGSDAVMHFSPRLAPADVGRPGVESRPQASLVLRARCLVVFADEAYSNQLHSIDAVGEETVGSASDGGSGSGRAPVINTEAAEMPEGTLLRRK-LRVSLTFRRI 903 T+ Y+P++++E +E I+A+TYA ++ WV+LR RRL+CWGG+P EPLPPW++ L + LV G+F E PNHVLLNEY+ G+GIMAHTDG FY P+TATLSLG AVM F+PR+ P VG V+ RP A +VLR R LVVF +EAY + LH+I A + VG+A APV N E+A G ++ R +R+SLTFR I Sbjct: 101 TVSYLPEWVAEDEEAAIMAQTYAVP---DSHPSWVTLRGRRLQCWGGEPRRDSAAEPLPPWLQRLSEGLVEAGIFPAEVAPNHVLLNEYKAGEGIMAHTDGDFYHPQTATLSLGGTAVMTFAPRVQPRAVGL--VDGRPVAEVVLRPRSLVVFREEAYLDHLHAIAASHSDEVGAA---------APVANLESAGARLGEVIARPAVRLSLTFRHI 302
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Match: A0A835ZDT2_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT2_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.120e-56 Identity = 112/241 (46.47%), Postives = 141/241 (58.51%), Query Frame = 1 Query: 232 QYMRVGDTPTIFYVPDFISEADEQQILARTYATDVRANASNEWVSLRTRRLKCWGGQ---PGESFRPEPLPPWVKALCDSLVIRGVFAEENRPNHVLLNEYQPGQGIMAHTDGPFYQPRTATLSLGSDAVMHFSPR-LAPADVGRPGVESRPQASLVLRARCLVVFADEAYSNQLHSIDAVGEETVGSASDGGSGSGRAPVINTEAAEMPEGTLLRRKLRVSLTFRRISADAGSAARVGDK 942 Q R G P+++Y PDF++ + +I+ + YA W LRTRRL+CWGGQ G + P L PW++ LC LV G+F PNHVL+NEYQPGQGIM HTDGP Y PRTATLSL SDAV + R +P D+G V+ P +L+LR R LVVFAD AY++ H ID V EE VG GSG + V EA E ++ R LR+SLTFR + AAR G + Sbjct: 11 QSHRTGTIPSVYYNPDFVTASLADEIIKQVYAVP---EGHARWTVLRTRRLQCWGGQLQADGRAHDPSDLCPWLQQLCTLLVTCGIFPAHAPPNHVLINEYQPGQGIMPHTDGPMYYPRTATLSLMSDAVFKLAQRPRSPGDIG--SVDLSPTEALLLRNRSLVVFADAAYTDFTHGIDFVHEEAVGD----GSGGTCSVVNGPEAGVAEEEVVVERALRISLTFRHVP----DAARTGQQ 238
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Match: A0A4D9DGD1_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DGD1_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.650e-56 Identity = 106/227 (46.70%), Postives = 139/227 (61.23%), Query Frame = 1 Query: 247 GDTPTIFYVPDFISEADEQQILARTYATDVRANASNEWVSLRTRRLKCWGGQPGE---SFRPEPLPPWVKALCDSLVIRGVFAEENRPNHVLLNEYQPGQGIMAHTDGPFYQPRTATLSLGSDAVMHFSPRLAPADVGRPGVESRPQASLVLRARCLVVFADEAYSNQLHSIDAVGEETVGSASDGGSGSGRAPVINTEAAE--MPEGTLLRRKLRVSLTFRRISAD 912 G +FYVP++IS+ EQ+I+ ++ V N+WV LR RRL+C+GG+P E SF+ E LPPW+ +C +L++ GVF EE PNHVLLNEY+PGQGIMAH DGPFY R A +SLG A+ F RL ++ ES P ++VL R L+VF EAY + LH I AV EE VG G PV+N E E + G L+R LR+SLT RR+ + Sbjct: 129 GPPDGVFYVPEYISKEMEQEIMEVAHSMPV-----NQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESGPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTE------GTTPVLNLERLEGRINVGDRLKRALRLSLTCRRVKEE 344
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Match: A0A7S2G3H8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3H8_9STRA) HSP 1 Score: 176 bits (445), Expect = 4.620e-50 Identity = 91/187 (48.66%), Postives = 120/187 (64.17%), Query Frame = 1 Query: 358 WVSLRTRRLKCWGGQPGE--SFRPEPLPPWVKALCDSLVIRGVFAEENRPNHVLLNEYQPGQGIMAHTDGPFYQPRTATLSLGSDAVMHFSPRLAPADVGRPGVESRPQASLVLRARCLVVFADEAYSNQLHSIDAVGEETVGSASDGGSGSGRAPVINTEAAEMPEGTLLRRK-LRVSLTFRRISA 909 W+SL RR++CWGGQP E F PEPLPPW+ +C +LV GVF E RPNHVL+NEY G+GI+ H+DGP Y P+TATLSLG A+M F PR++ D+G V S P ++LR R LVVF D AY + +H+I + + VGS RA IN + G +++R +RVSLTFR ++A Sbjct: 16 WISLSGRRVQCWGGQPNERTKFVPEPLPPWLVDICTALVDAGVFPSEVRPNHVLINEYANGEGILPHSDGPMYFPKTATLSLGGSAIMTFEPRISSGDIGE--VSSDPICEVILRPRSLVVFEDAAYIDYMHAIASRQTDQVGS---------RAVPINLALSGARHGEMVQRPAIRVSLTFRHVTA 191
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Match: A0A7S0PB53_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PB53_CAFRO) HSP 1 Score: 164 bits (415), Expect = 4.370e-44 Identity = 102/224 (45.54%), Postives = 128/224 (57.14%), Query Frame = 1 Query: 277 DFISEADEQQILARTYATDVRANASNEWVSLRTRRLKCWGGQPGESFR---PEPLPPWVKALCDSLVIRGVFAEENRPNHVLLNEYQPGQGIMAHTDGPFYQPRTATLSLGSDAVMHFSPRLAPADVGRPG---VESRPQASLVLRARCLVVFADEAYSNQLHSIDAVGEETVGSASDGGSGSGRAPVINTEAAEMPEGTLL-RRKLRVSLTFRRISADAGSAA 927 +F+S A E +L R + V AS WV LR RRL +GG P R EPLPPW+ A+ D LV G F E+ RPNHVL+N Y PG+GI+ HTDGP Y P TATLSLGSDAVM F+PR+ VG +E+ L R LVVF+DEAY++ LH + AVGE V A +N + EG+L+ R LRVSLT R + A G+ + Sbjct: 103 EFLSAACEADLL-RCVLSPVY-EASGRWVRLRGRRLLQFGGTPMPGPRLLGREPLPPWLGAVVDRLVATGAFPEDKRPNHVLVNAYGPGEGILPHTDGPLYFPCTATLSLGSDAVMRFAPRVPSELVGTSSQSHLEAAKSFDAGLARRSLVVFSDEAYTSALHDVAAVGEHRV-----------TAKCLNAASLGWAEGSLIPRAPLRVSLTMRHVPAVKGATS 313
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Match: A0A226EQ42_FOLCA (Alpha-ketoglutarate-dependent dioxygenase alkB 6 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226EQ42_FOLCA) HSP 1 Score: 155 bits (392), Expect = 8.800e-42 Identity = 90/235 (38.30%), Postives = 124/235 (52.77%), Query Frame = 1 Query: 235 YMRVGDTPTIFYVPDFISEADEQQILARTYATDVRANASNEWVSLRTRRLKCWGGQPG-ESFRPEPLPPWVKALCDSLVIRGVFAEENRPNHVLLNEYQPGQGIMAHTDGPFYQPRTATLSLGSDAVMHFSPRLAPADVGRPGVESRPQASLVLRARCLVVFADEAYSNQLHSIDAVGEETVGSASDGGSGSGRAPVINTEAAEMPEGTLLRRKLRVSLTFRRISADAGSAARVG 936 Y G P+IFYVP+FISE DE +LA+ Y +W L RRL+ WGG P E LPPW+K D + +F PNHVL+NEY+PGQGIM H DG + P T++LGS ++++F L+ P + R + SL+L R L+V DE Y+N LH ID ++ V + VIN+++A + G L R RVSLT R + + R+G Sbjct: 6 YKVEGGPPSIFYVPNFISEEDETVLLAKIYQAP-----KPKWTVLTNRRLQNWGGLPHPRGMIAEKLPPWLKKYVDDIAELNLF-NGKLPNHVLVNEYRPGQGIMPHLDGSLFHPTITTINLGSHSIINFYTPLSNVSKEVPDYKQRLRFSLMLEPRSLLVLQDECYNNYLHGIDETTKDVVSES-----------VINSKSAHVTVGQELDRGTRVSLTIRFVPRTTKAPIRIG 223
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Match: A0A2R5GWX9_9STRA (Alpha-ketoglutarate-dependent dioxygenase alkB-like 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWX9_9STRA) HSP 1 Score: 153 bits (387), Expect = 2.470e-40 Identity = 85/212 (40.09%), Postives = 119/212 (56.13%), Query Frame = 1 Query: 262 IFYVPDFISEADEQQILARTYATDVRANASNEWVSLRTRRLKCWGGQPGESFRPEPLPPWVKALCDSLVIRGVFAEENRPNHVLLNEYQPGQGIMAHTDGPFYQPRTATLSLGSDAVMHFSPRLAPADVGRPGVESRPQASLVLRARCLVVFADEAYSNQLHSIDAVGEETVGSASDGGSGSGRAPVINTEAAEMPEGTLLRRKLRVSLTFR 897 ++Y+P+F + + +L +TY+ + W +R+RRL+C +R +PPW+ L SLV G+F+ RPNH LLNEY+PGQGI+ HTDGP Y A +SLGS A F+ RL ++G E+R A+L+L+ R LVVFA +AY LHS+ A+ EE V A V N EAA+ G + R RVS+T R Sbjct: 92 VWYIPNFCTVEEHDDMLEQTYSK------AASWKDIRSRRLQC--------YREPEMPPWLDTLASSLVQAGIFSPAQRPNHALLNEYEPGQGILGHTDGPVYHSLVACISLGSPATFRFTERLLTDEIGVR--EARELATLLLQPRSLVVFAADAYREALHSVPALLEEVVS-----------ADVANIEAAQASVGDRIPRTTRVSITMR 276
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Match: A0A3Q2DRJ9_CYPVA (AlkB homolog 6 n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2DRJ9_CYPVA) HSP 1 Score: 149 bits (375), Expect = 3.620e-39 Identity = 93/237 (39.24%), Postives = 124/237 (52.32%), Query Frame = 1 Query: 202 PVLEMDKARFQYMRVGDTP-TIFYVPDFISEADEQQILARTYATDVRANASNEWVSLRTRRLKCWGGQPG-ESFRPEPLPPWVKALCDSLVIRGVFAEENRPNHVLLNEYQPGQGIMAHTDGPFYQPRTATLSLGSDAVMHFSPRLAPADVGRPGVE-SRPQASLVLRARCLVVFADEAYSNQLHSIDAVGEETVGSASDGGSGSGRAPVINTEAAEMPEGTLLRRKLRVSLTFRRI 903 PVLE D RF RV + P T+FYVPDF+S +E +L R Y + +W L RRL+ WGG P E +P W++ LC+ + G F NR NHVL+NEY PGQGIM H DGP Y P +T+SLGS ++ F ++ + P + +R SL+LR R L+V D+ Y N H I +T+ V+N AA+ G L R RVSLT R + Sbjct: 6 PVLE-DLERF---RVPEAPQTVFYVPDFVSPEEESFLLERVYRSP-----RTKWTQLSGRRLQNWGGLPHPRGMMAEEVPDWLQNLCEKISSLGAFGG-NRANHVLVNEYGPGQGIMPHQDGPLYHPTVSTVSLGSHTLLDFYRPVSGLEGAEPQTQQNRYLFSLLLRPRSLLVLQDDMYQNLQHGIQERDRDTL-----------TRQVLNLSAAQARSGETLLRGTRVSLTIRHV 221
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Match: A0A044TLN5_ONCVO (Fe2OG dioxygenase domain-containing protein n=3 Tax=Onchocerca TaxID=6281 RepID=A0A044TLN5_ONCVO) HSP 1 Score: 148 bits (373), Expect = 6.750e-39 Identity = 89/230 (38.70%), Postives = 124/230 (53.91%), Query Frame = 1 Query: 229 FQYMRVGDTP-TIFYVPDFISEADEQQILARTYATDVRANASNEWVSLRTRRLKCWGGQPGESF--RPEPLPPWVKALCDSLV-IRGVFAEENRPNHVLLNEYQPGQGIMAHTDGPFYQPRTATLSLGSDAVMHFSPRLAPADVGRPGV-ESRPQASLVLRARCLVVFADEAYSNQLHSIDAVGEETVGSASDGGSGSGRAPVINTEAAEMPEGTLLRRKLRVSLTFRRI 903 F TP TI Y+PDFI+E +E+ L++ Y+ +W L RRL+ WGG G+ F R +PPW+ ++ D ++ + G F + RPNHVL+NEY PGQGIMAHTDG + P T+SLGSD V+ + P D R + E R S+ L R LVV +D+AY+N LH I + + S + N E+ G ++ R LRVSLT R + Sbjct: 7 FDRFMARKTPATIRYIPDFIAEEEEKFFLSKIYSVP-----KPKWQQLLNRRLQNWGGIVGKEFLIRDSVIPPWLDSVIDKIMALGGTFPPDRRPNHVLINEYLPGQGIMAHTDGSAFYPMVTTISLGSDVVVDY---YKPIDPKRNNIKEERYLGSIFLEQRSLVVVSDDAYANCLHEIADRPFDVITS-----------HIFNLESINRRIGEVMNRDLRVSLTIRNV 217 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5596.13915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5596.13915.1 >prot_L-elsbetiae_contig5596.13915.1 ID=prot_L-elsbetiae_contig5596.13915.1|Name=mRNA_L-elsbetiae_contig5596.13915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=320bp MTSLDFQSLLKQEKALRQAELEQQHAQDKKIDSLEADNTARQAKVVAKPRback to top mRNA from alignment at L-elsbetiae_contig5596:8448..11449- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5596.13915.1 ID=mRNA_L-elsbetiae_contig5596.13915.1|Name=mRNA_L-elsbetiae_contig5596.13915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3002bp|location=Sequence derived from alignment at L-elsbetiae_contig5596:8448..11449- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5596:8448..11449- >mRNA_L-elsbetiae_contig5596.13915.1 ID=mRNA_L-elsbetiae_contig5596.13915.1|Name=mRNA_L-elsbetiae_contig5596.13915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1920bp|location=Sequence derived from alignment at L-elsbetiae_contig5596:8448..11449- (Laminarionema elsbetiae ELsaHSoW15)back to top |