Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 579 |
Cds size | 345 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816590.5554478-UTR-L-elsbetiae_contig5581:8657..8891 | 1622816590.5554478-UTR-L-elsbetiae_contig5581:8657..8891 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5581 8658..8891 + |
1691683668.8720915-UTR-L-elsbetiae_contig5581:8657..8891 | 1691683668.8720915-UTR-L-elsbetiae_contig5581:8657..8891 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5581 8658..8891 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816590.5715883-CDS-L-elsbetiae_contig5581:8891..9236 | 1622816590.5715883-CDS-L-elsbetiae_contig5581:8891..9236 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5581 8892..9236 + |
1691683668.8831515-CDS-L-elsbetiae_contig5581:8891..9236 | 1691683668.8831515-CDS-L-elsbetiae_contig5581:8891..9236 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5581 8892..9236 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5581.13898.1 >prot_L-elsbetiae_contig5581.13898.1 ID=prot_L-elsbetiae_contig5581.13898.1|Name=mRNA_L-elsbetiae_contig5581.13898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp
MNFLCSGRREPYLGLRVGQSCSGHSAPRLRRGGGVFGVKFRDVAGALSVS GISVMLLVLHTTLRRFVVKSSIFFFVKLLQVGNLKAIFQAAVARCSRSTT RESGVHSCAGADTP* back to topmRNA from alignment at L-elsbetiae_contig5581:8658..9236+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5581.13898.1 ID=mRNA_L-elsbetiae_contig5581.13898.1|Name=mRNA_L-elsbetiae_contig5581.13898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=579bp|location=Sequence derived from alignment at L-elsbetiae_contig5581:8658..9236+ (Laminarionema elsbetiae ELsaHSoW15) CTCTTGGGTTCTATATTTAGTAATTGAGTTGGCCAATGTCGTGGATAGGA
AAATACGCGACTCGAAGGCACGGCAGCAGGAAGGAGAATAGGGCGGGTGG
ATCTCTGGGTATACGGGGTCGTGGGCAAGTCATGGTGTGCCCCAGAAAGT
GCGAAAGCTCTGCATAGCGCCGATGACCTGTTGACTGCGCACCGCTGTGC
CTGCGTTCTTGGGCCGCTCCGCTGGTGAAGTGGTATGAATTTTCTCTGCT
CGGGGCGTAGAGAGCCTTACCTTGGGTTGCGCGTTGGTCAGAGCTGCTCT
GGGCATTCCGCTCCACGCCTGCGGCGGGGTGGGGGCGTGTTTGGAGTCAA
GTTCCGTGACGTGGCAGGGGCTTTGTCTGTGTCGGGCATCTCGGTGATGC
TACTTGTACTACATACGACGTTGCGACGGTTTGTTGTGAAATCGTCGATT
TTTTTTTTCGTCAAGCTTCTTCAGGTTGGAAACCTAAAAGCCATATTTCA
AGCCGCGGTTGCTCGATGTTCCCGCTCAACGACTCGCGAAAGTGGGGTGC
ACAGCTGCGCTGGTGCAGACACCCCCTGA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5581:8658..9236+ >mRNA_L-elsbetiae_contig5581.13898.1 ID=mRNA_L-elsbetiae_contig5581.13898.1|Name=mRNA_L-elsbetiae_contig5581.13898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=690bp|location=Sequence derived from alignment at L-elsbetiae_contig5581:8658..9236+ (Laminarionema elsbetiae ELsaHSoW15) ATGAATTTTCTCTGCTCGGGGCGTAGAGAGCCTTACCTTGGGTTGCGCGT TGGTCAGAGCTGCTCTGGGCATTCCGCTCCACGCCTGCGGCGGGGTGGGG GCGTGTTTGGAGTCAAGTTCCGTGACGTGGCAGGGGCTTTGTCTGTGTCG GGCATCTCGGTGATGCTACTTGTACTACATACGACGTTGCGACGGTTTGT TGTGAAATCGTCGATTTTTTTTTTCGTCAAGCTTCTTCAGGTTGGAAACC TAAAAGCCATATTTCAAGCCGCGGTTGCTCGATGTTCCCGCTCAACGACT CGCGAAAGTGGGGTGCACAGCTGCGCTGGTGCAGACACCCCCTGAATGAA TTTTCTCTGCTCGGGGCGTAGAGAGCCTTACCTTGGGTTGCGCGTTGGTC AGAGCTGCTCTGGGCATTCCGCTCCACGCCTGCGGCGGGGTGGGGGCGTG TTTGGAGTCAAGTTCCGTGACGTGGCAGGGGCTTTGTCTGTGTCGGGCAT CTCGGTGATGCTACTTGTACTACATACGACGTTGCGACGGTTTGTTGTGA AATCGTCGATTTTTTTTTTCGTCAAGCTTCTTCAGGTTGGAAACCTAAAA GCCATATTTCAAGCCGCGGTTGCTCGATGTTCCCGCTCAACGACTCGCGA AAGTGGGGTGCACAGCTGCGCTGGTGCAGACACCCCCTGA back to top
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