mRNA_L-elsbetiae_contig5576.13890.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Match: D8LGT3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT3_ECTSI) HSP 1 Score: 300 bits (767), Expect = 8.390e-97 Identity = 174/224 (77.68%), Postives = 196/224 (87.50%), Query Frame = 1 Query: 28 MKSAFLAAVLSLLSAASIEGFVAN---MPVHTACSSSRASAMQMSAEPQTRQAVLQQGLAGVLSLAGVAAVSSQPASAGGLSPVSNGDKWAGVLDPRSAVKDADKMASDSVKKDLDALKKYQTATKEITAMLAKDSQADVLPKVKESFKFAEFRQVLNEVNDVFDEDTQRGTDLIIRNMLQDALELANASKMKPDIPRSERKIEILNKKLQKLDQAFVSLNAFL 690 MKSAFLAAVL+LLS AS + FVA +PV A S R +A++MSAEPQ+RQA LQQG+AGVLSLAG+AA+ SQPASAGGLSPVSN DKWAGVLDPRSAVKD+DKMASD VKKDL ALK YQ+ATK+I+ LAKD QA+VLPKV+++FKFAEFRQVLN VNDVFDEDTQRGTDLIIRNMLQDALEL+ ASKMKPD+PRS RK+EILNKKL KLDQAF LNA+L Sbjct: 1 MKSAFLAAVLALLSVASTDAFVAGSAKLPVRAAAS--RTAAVEMSAEPQSRQAFLQQGVAGVLSLAGIAAL-SQPASAGGLSPVSNSDKWAGVLDPRSAVKDSDKMASDGVKKDLAALKNYQSATKDISDTLAKDPQANVLPKVQQTFKFAEFRQVLNGVNDVFDEDTQRGTDLIIRNMLQDALELSQASKMKPDVPRSPRKVEILNKKLMKLDQAFEKLNAYL 221
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Match: A0A7R9VT45_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VT45_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.020e-29 Identity = 83/181 (45.86%), Postives = 111/181 (61.33%), Query Frame = 1 Query: 148 MSAEPQTRQAVLQQGLAGVLSLAGVAAVSSQPASAGGLSPVSNGDKWAGVLDPRSAVKDADKMASDSVKKDLDALKKYQTATKEITAMLAKDSQADVLPKVKESFKFAEFRQVLNEVNDVFDEDTQRGTDLIIRNMLQDALELANASKMKPDIPRSERKIEILNKKLQKLDQAFVSLNAFL 690 M+ E TR LQQ LA S A V S+ A GG G VLDP+SA DAD +ASD+V+K L A+K Y ++ K + L+ DSQAD+ PK+++ F FA+ R LN VN FDEDTQRGTD +IR ++QD EL A++ K + RSER+++I+ KL KL +AF AF+ Sbjct: 2 MAQEGTTRSQFLQQSLAAAASFA-VLPQSANAAKYGGF-----GAGSPEVLDPKSAEVDADILASDAVQKALGAVKSYASSVKAMQDTLSADSQADIGPKIRKDFDFAQLRADLNTVNSAFDEDTQRGTDRLIRIVMQDITELETANRQKDGVARSERRLDIMKGKLDKLGKAFNDFLAFV 176
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Match: A0A6U0F263_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0F263_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.130e-27 Identity = 80/190 (42.11%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 127 SRASAMQMSAEPQTRQAVLQQGLAGVLSLAGVAAVSSQP--ASAGGLSPVSNGDKWAGVLDPRSAVKDADKMASDSVKKDLDALKKYQTATKEITAMLAKDSQADVLPKVKESFKFAEFRQVLNEVNDVFDEDTQRGTDLIIRNMLQDALELANASKMKPDIPRSERKIEILNKKLQKLDQAFVSLNAFL 690 SR S +SAE Q+R L Q A + +LA A S+ S G SP V+DP SA+ D D +AS+SV+K + ++ Y TA K ++A +A DSQAD+ P +++ F + R N V + FDEDTQRGTD ++R +LQD EL A+K KP +PRSE+++ I+ KL KL++AF AF+ Sbjct: 25 SRQSTTALSAE-QSRSGFLAQSAAAIATLAAFPATSNAAKYGSFGAGSPE--------VIDPSSAIIDQDILASESVQKCISGIRSYLTAIKSMSATVASDSQADIGPSIRKELDFVQVRADFNGVTEAFDEDTQRGTDRLVRIILQDITELETANKQKPGVPRSEKRLSIVKGKLAKLEKAFDDFLAFV 205
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Match: A0A7S2Y0S9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0S9_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.640e-26 Identity = 64/132 (48.48%), Postives = 87/132 (65.91%), Query Frame = 1 Query: 292 GVLDPRSAVKDADKMASDSVKKDLDALKKYQTATKEITAMLAKDSQADVLPKVKESFKFAEFRQVLNEVNDVFDEDTQRGTDLIIRNMLQDALELANASKMKPDIPRSERKIEILNKKLQKLDQAFVSLNAF 687 GV+DP++A D D+++ VK DLD LK Y T KE A +AKD Q ++ V+ F + R LN +N VFDEDTQRGTD +IR+ LQD EL ++++ KP + RS RKI ++NKKL+KL+ F L AF Sbjct: 83 GVVDPKTASIDTDELSK--VKGDLDTLKGYLTTVKEFRAQMAKDPQTSLVADVQSKLDFGKMRTTLNNLNGVFDEDTQRGTDRLIRDTLQDVYELESSARQKPGVDRSPRKITLVNKKLEKLENVFTDLLAF 212
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Match: A0A7S2UA53_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA53_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.050e-25 Identity = 65/125 (52.00%), Postives = 84/125 (67.20%), Query Frame = 1 Query: 295 VLDPRSAVKDADKMASDSVKKDLDALKKYQTATKEITAMLAKDSQADVLPKVKESFKFAEFRQVLNEVNDVFDEDTQRGTDLIIRNMLQDALELANASKMKPDIPRSERKIEILNKKLQKLDQAF 669 VLDP+ A+ D D +A+ SV+ L +K Y + E+ + LAKDSQAD+ P V+ F++ R LN VN+ FDEDTQRGTD IIR +LQD EL A+ KP IPRSER++ I+N KL KL AF Sbjct: 74 VLDPKEAIVDTDILATASVQGALKGVKGYLSTVLELKSTLAKDSQADIGPSVRRQLDFSKIRADLNNVNEAFDEDTQRGTDRIIRIILQDITELEAANTQKPGIPRSERRLGIMNAKLTKLQTAF 198
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Match: A0A7S2EU98_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EU98_9STRA) HSP 1 Score: 112 bits (279), Expect = 5.280e-25 Identity = 75/190 (39.47%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 127 SRASAMQMSAEPQTRQAVLQQGLAGVLSLAGVAAVSSQP--ASAGGLSPVSNGDKWAGVLDPRSAVKDADKMASDSVKKDLDALKKYQTATKEITAMLAKDSQADVLPKVKESFKFAEFRQVLNEVNDVFDEDTQRGTDLIIRNMLQDALELANASKMKPDIPRSERKIEILNKKLQKLDQAFVSLNAFL 690 SR S +SAE Q+R L Q A ++A +VS+ S G SP VLDP++A+ D D + ++SV+K + ++ Y +A K ++A +A DSQAD+ P +++ F + R N V + FDEDTQRGTD ++R +LQD EL A++ KP +PRSE+++ I+ KL KL++AF AF+ Sbjct: 25 SRQSTTALSAE-QSRSDFLTQSAAAFATIAAFPSVSNAAKYGSFGAGSPE--------VLDPKTAIIDEDILKTESVQKCISGIRSYLSAVKSMSATVAADSQADIGPSIRKELDFVQVRADFNGVTEAFDEDTQRGTDRLVRIILQDITELETANRQKPGVPRSEKRLSIVQGKLSKLEKAFDDFLAFV 205
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Match: A0A7S2BZB6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZB6_9STRA) HSP 1 Score: 112 bits (279), Expect = 5.550e-25 Identity = 60/125 (48.00%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 295 VLDPRSAVKDADKMASDSVKKDLDALKKYQTATKEITAMLAKDSQADVLPKVKESFKFAEFRQVLNEVNDVFDEDTQRGTDLIIRNMLQDALELANASKMKPDIPRSERKIEILNKKLQKLDQAF 669 VLDP+S D++ +AS SV+ L +++YQ K++ + ++ Q D+ P V+ESF F++ R LN VN DEDTQRGTD +IR ++QD EL NA+ +KP PRS RK+EILN+KL KL ++F Sbjct: 75 VLDPKSGTIDSEILASSSVQDSLKNVRRYQDIVKQMEQAMIQNDQVDLGPAVRESFDFSKIRYALNNVNSALDEDTQRGTDRLIRGVIQDLAELENANLVKPGNPRSARKVEILNRKLSKLCKSF 199
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Match: A0A7S2RFI5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFI5_9STRA) HSP 1 Score: 107 bits (267), Expect = 4.130e-23 Identity = 59/125 (47.20%), Postives = 83/125 (66.40%), Query Frame = 1 Query: 295 VLDPRSAVKDADKMASDSVKKDLDALKKYQTATKEITAMLAKDSQADVLPKVKESFKFAEFRQVLNEVNDVFDEDTQRGTDLIIRNMLQDALELANASKMKPDIPRSERKIEILNKKLQKLDQAF 669 V +P +A D + + S V++ L A+K YQTA EI + LA++ Q +++P ++++F F++ R LN VN DEDTQRGTD +IR ++QD EL AS +KP PRS RKI +N KL KLD AF Sbjct: 93 VTEPNAAAVDPEVLKSSEVQESLKAIKGYQTAVNEIQSQLAQNDQLELVPAIRKNFDFSKIRTDLNNVNAALDEDTQRGTDRLIRAVIQDLTELETASALKPGKPRSPRKIAAMNGKLAKLDAAF 217
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Match: B8BU34_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BU34_THAPS) HSP 1 Score: 108 bits (270), Expect = 4.510e-23 Identity = 60/140 (42.86%), Postives = 93/140 (66.43%), Query Frame = 1 Query: 295 VLDPRSAVKDADKMASDSVKKDLDALKKYQTATKEITAMLAKDSQADVLPKVKESFKFAEFRQVLNEVNDVFDEDTQRGTDLIIRNMLQDALELANASKMKPDIPRSERKIEILNKKLQKLDQAFVSLNAFL*IYKEILA 714 V+DP+ A+ D D + SDSV+K L A++ YQ + ++ + LA DSQAD+ PK+++ F F+ R LN +N DEDTQRGTD I+R +LQD EL A K K +PRS+++++ + KL KL+++F + + Y +IL+ Sbjct: 127 VVDPKDAIIDEDILKSDSVQKGLAAVRGYQQSVVDMKSALASDSQADIGPKIRKDFDFSVIRTDLNAINAALDEDTQRGTDRIVRAILQDITELEVAQKQKAGVPRSDKRLKTVCGKLDKLEKSFRKIANVIIKYGDILS 266
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Match: A0A1Z5KC14_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC14_FISSO) HSP 1 Score: 106 bits (264), Expect = 7.690e-23 Identity = 61/132 (46.21%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 292 GVLDPRSAVKDADKMASDSVKKDLDALKKYQTATKEITAMLAKDSQADVLPKVKESFKFAEFRQVLNEVNDVFDEDTQRGTDLIIRNMLQDALELANASKMKPDIPRSERKIEILNKKLQKLDQAFVSLNAF 687 GVLDP++A DAD + SD+V+ L +K Y++A +++ A L DSQ +V + + FA+ R LN VN F+EDTQRGTD +IR ++QD EL A+ K IPRS R++EI+ KL KL++AF AF Sbjct: 79 GVLDPKTAEIDADILKSDAVQSALKKVKGYRSAVQDMQAALKADSQVNVRKTIIKDLDFADLRDTLNTVNTAFEEDTQRGTDRLIRVIMQDITELEQANTQKDGIPRSPRRVEIMEGKLAKLEKAFSDFLAF 210 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5576.13890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5576.13890.1 >prot_L-elsbetiae_contig5576.13890.1 ID=prot_L-elsbetiae_contig5576.13890.1|Name=mRNA_L-elsbetiae_contig5576.13890.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=222bp MKSAFLAAVLSLLSAASIEGFVANMPVHTACSSSRASAMQMSAEPQTRQAback to top mRNA from alignment at L-elsbetiae_contig5576:1965..7351+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5576.13890.1 ID=mRNA_L-elsbetiae_contig5576.13890.1|Name=mRNA_L-elsbetiae_contig5576.13890.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5387bp|location=Sequence derived from alignment at L-elsbetiae_contig5576:1965..7351+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5576:1965..7351+ >mRNA_L-elsbetiae_contig5576.13890.1 ID=mRNA_L-elsbetiae_contig5576.13890.1|Name=mRNA_L-elsbetiae_contig5576.13890.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1332bp|location=Sequence derived from alignment at L-elsbetiae_contig5576:1965..7351+ (Laminarionema elsbetiae ELsaHSoW15)back to top |