mRNA_L-elsbetiae_contig5568.13879.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5568.13879.1
Unique NamemRNA_L-elsbetiae_contig5568.13879.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Match: A0A6H5JF92_9PHAE (6-phosphogluconolactonase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JF92_9PHAE)

HSP 1 Score: 432 bits (1110), Expect = 8.320e-148
Identity = 221/275 (80.36%), Postives = 242/275 (88.00%), Query Frame = 1
Query:    1 MTTTLLVGSSPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKILAGLAQAEGIDWSSTKIYFADERCVPLDHSDSNYKAWDGLFSSSGIPAENVIAVKTDLSPEAAAADYEATLKAAFPPGKG--------DASEASDHFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDKAAASQCPPEMAALATNC 801
            MTTTLLVGSSPDALATEL++R+GAIAKESV ARGVFNV VSGGSMPKIL+GLAQAEGIDWS T+I+FADERCVPLDH+DSNYKAW+GLFSSSGIPAENV+AV+TDL+PE AAADY+A L+  FP            ++   +   P FDAALLGVGPDGHTCSLFPSHPLLEERSKWVA+IEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLL VG DGALESAG SSPYPAARV V+EG+ LAWCVD+AAASQCPPE+ ALAT C
Sbjct:    1 MTTTLLVGSSPDALATELVRRLGAIAKESVLARGVFNVTVSGGSMPKILSGLAQAEGIDWSKTRIFFADERCVPLDHTDSNYKAWEGLFSSSGIPAENVVAVRTDLTPEEAAADYQAKLRHHFPXXXXXXXXXXXXESLPTASPPPSFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAYIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLSVGTDGALESAGESSPYPAARVKVAEGKALAWCVDEAAASQCPPEIVALATKC 275          
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Match: A0A3F2RX10_9STRA (6-phosphogluconolactonase n=22 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RX10_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.110e-59
Identity = 120/258 (46.51%), Postives = 158/258 (61.24%), Query Frame = 1
Query:   13 LLVGSSPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKIL-AGLAQAEG-IDWSSTKIYFADERCVPLDHSDSNYKAWDG-LFSSSGIPAENVIAVKTDLSPEAAAADYEATLKAAFPPGKGDASEASDHFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDKAAASQCPPE 777
            L V S+PD +  ++ + I  ++K+++ A G F VA+SGGS+PKIL  GL   +G +D+S   +YFADERCVPLDH DSNYKA    LF    +P   +  +   LSP   A DY   L          A       P FD  LLG+GPDGHTCSLFP HPLLEE++ +VA IEDSPKPPPQR+TLTYPV+NN+ NV F+ TG GKA L+P ++ V           + P PAA V  ++G  + W +D+ AA++   E
Sbjct:   27 LRVSSTPDQVGVDVGKLIHDLSKQAIAAHGRFTVALSGGSLPKILNKGLESIKGDVDFSKWFVYFADERCVPLDHDDSNYKACKAALFDFIPVPTSQIYTIDASLSPADMAVDYTKKL----------AEIWGSDLPRFDLILLGMGPDGHTCSLFPGHPLLEEKTLFVASIEDSPKPPPQRITLTYPVVNNAANVAFVATGAGKAELIPHMVGVEKR--------TPPLPAANVKPTDGV-VYWFIDEDAAAKLSDE 265          
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Match: A0A2D4CA35_PYTIN (6-phosphogluconolactonase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CA35_PYTIN)

HSP 1 Score: 202 bits (515), Expect = 1.790e-58
Identity = 124/251 (49.40%), Postives = 156/251 (62.15%), Query Frame = 1
Query:   19 VGSSPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKIL-AGLAQA-EGIDWSSTKIYFADERCVPLDHSDSNYKAW-DGLFSSSGIPAENVIAVKTDLSPEAAAADYEATLKAAFPPGKGDASEASDHFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDKAAAS 762
            V +S DA+   + Q +   ++E++   G F +A+SGGS+PKIL  GLA   +G+D+S   ++FADERCVPLDH DSNYKA  + LF    IPA  +  +   LSPEAAAADY   L          AS      P FD  LLG+GPDGHTCSLFP HPLL E+  +VA IEDSPKPPPQR+TLTYPV+NN+ +V F+ TG  KA L+  +L       LE        PAA VS S G  +AW +D+ AAS
Sbjct:   21 VFASTDAVGLAVGQLVHKHSREAIAKHGRFTLALSGGSLPKILNKGLASIKDGLDFSKWHVFFADERCVPLDHDDSNYKACKEALFDHVSIPASQIYTIDASLSPEAAAADYTTKL----------ASVWGAELPRFDLLLLGMGPDGHTCSLFPGHPLLNEQRLFVAAIEDSPKPPPQRITLTYPVVNNAAHVAFVATGASKAPLMAHML------GLERR--EPALPAAAVSPSNGV-VAWYIDRDAAS 252          
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Match: A0A5D6XPB3_9STRA (6-phosphogluconolactonase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPB3_9STRA)

HSP 1 Score: 201 bits (512), Expect = 2.540e-58
Identity = 116/253 (45.85%), Postives = 163/253 (64.43%), Query Frame = 1
Query:   16 LVGSSPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKIL-AGLAQAEG-IDWSSTKIYFADERCVPLDHSDSNYKAW-DGLFSSSGIPAENVIAVKTDLSPEAAAADYEATLKAAFPPGKGDASEASDHFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDKAAASQ 765
            +V  +PD +   + + +  +++E++ ARG F +A+SGGS+PKIL  GL+  +G ++++   ++FADERCVPL+H DSNYKA  + LF    IPA  +  +   LSPEAAA DY A L          A+   D  P FD  LLG+GPDGHTCSLFP H LL+ER+ +VA I+DSPKPPPQR+TLTYPV+NN+ ++ F+ TG GKA L+P +L        E+     P PAA V  + G  + W +D+ AA++
Sbjct:    4 VVRPTPDDVGAAVGELVLRVSQEAIAARGRFTLALSGGSLPKILNKGLSALQGDVNYAKWHVFFADERCVPLEHDDSNYKACKEALFDHVAIPAAQIHTIDASLSPEAAAVDYTAKL----------ATIWGDELPRFDLILLGMGPDGHTCSLFPGHKLLQERTLFVASIDDSPKPPPQRITLTYPVVNNAEHIAFVATGAGKAELMPHML------GRETR--EPPLPAADVKPTHGV-VYWYIDQDAAAK 237          
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Match: A0A3M6VDW2_9STRA (6-phosphogluconolactonase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDW2_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.120e-57
Identity = 117/252 (46.43%), Postives = 160/252 (63.49%), Query Frame = 1
Query:   19 VGSSPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKILAGLAQA--EGIDWSSTKIYFADERCVPLDHSDSNYKAW-DGLFSSSGIPAENVIAVKTDLSPEAAAADYEATLKAAFPPGKGDASE-ASDHFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDKAAAS 762
            V S+PD +   + Q I  ++KE++ A G F VA+SGGS+PKIL    QA  + +D+S   +YFADERCV LDH+DSNYKA  + LF    IP   + ++   L+P++ A DY  T K A   G   ++       P FD  LLG+GPDGHTCSLFP HPLLEE++ +VA IEDSPKPP QR+TLTYPV+NN+ NV F+ TG GKA L+P ++ +           + P PAA + + +G  + W +D+ AA+
Sbjct:    5 VSSTPDKVGAAVGQLIFKLSKETITANGRFTVALSGGSLPKILKKGLQAIKDEVDFSKWFVYFADERCVSLDHNDSNYKACKEALFDFISIPESQIFSIDASLTPKSMAVDY--TKKLAEVWGNDVSTPLVLPVLPRFDLILLGMGPDGHTCSLFPGHPLLEEKTLFVASIEDSPKPPSQRITLTYPVVNNAANVAFVATGAGKAKLIPHMVGIEKR--------TPPLPAANIKLIDGE-IYWFIDEDAAA 245          
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Match: K3WB39_GLOUD (6-phosphogluconolactonase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB39_GLOUD)

HSP 1 Score: 199 bits (507), Expect = 1.400e-57
Identity = 118/253 (46.64%), Postives = 157/253 (62.06%), Query Frame = 1
Query:   16 LVGSSPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKIL-AGLAQAEG-IDWSSTKIYFADERCVPLDHSDSNYKAW-DGLFSSSGIPAENVIAVKTDLSPEAAAADYEATLKAAFPPGKGDASEASDHFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDKAAASQ 765
            +V  + D + + + + + +++++++   G F +A+SGGS+PKIL  GLA  +G +D+S   +YFADERCVPLD  DSNYKA  + LF    IPA  +  +   LSPEAAA DY A L          AS      P FD  LLG+GPDGHTCSLFP H LL+E   +VA IEDSPKPPPQR+TLTYPV+NN+ +V F+ TG GKA L+P +  VG +          P PAA V    G  + W +D+ AAS+
Sbjct:    4 VVRPTADEVGSAVGELVLSVSQKAIATHGRFTLALSGGSLPKILNKGLAAIQGDVDYSKWHVYFADERCVPLDSDDSNYKACKEALFDHIAIPAAQIYTIDASLSPEAAAVDYTAKL----------ASVWGSELPRFDLILLGMGPDGHTCSLFPGHKLLKEDKLFVASIEDSPKPPPQRITLTYPVVNNAEHVAFVATGAGKADLMPHM--VGTEKR------DPPLPAAAVKPKNG-TVYWYIDQDAASK 237          
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Match: A0A485KYS3_9STRA (6-phosphogluconolactonase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYS3_9STRA)

HSP 1 Score: 197 bits (500), Expect = 3.770e-56
Identity = 113/254 (44.49%), Postives = 155/254 (61.02%), Query Frame = 1
Query:   13 LLVGSSPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKILA-GLAQA-EGIDWSSTKIYFADERCVPLDHSDSNYKAW-DGLFSSSGIPAENVIAVKTDLSPEAAAADYEATLKAAFPPGKGDASEASDHFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDKAAASQ 765
            L +GS+ DA+ + + + +  +++ S+ A G F++A+SGGS+PKIL  GL+   +G+D+S   ++FADERCVPLDH+DSNY A  D LF    IP   +  +     P   A DY   L   +              P FD  LLG+GPDGHTCSLFP HPLL+E   WVA I DSPKPPP+R+TLTYPV+NN+  V F+ TGE KA L+  +L V A         +   PAARV  ++G+   W +D+AAA++
Sbjct:   33 LHIGSTGDAVGSAVAKLVAELSQASIAASGRFSLALSGGSLPKILEKGLSSLKDGVDFSKWHVFFADERCVPLDHADSNYLACHDALFQHVSIPRSQIYTIALHDDPAVVAQDYTQQLSQLW----------GTELPRFDLILLGMGPDGHTCSLFPGHPLLDETHLWVASISDSPKPPPKRITLTYPVVNNAAAVAFVATGESKAPLMRHMLGVDAQ--------TPSLPAARVHPTQGQTH-WFIDEAAAAK 267          
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Match: A0A0D0BYH7_9AGAM (6-phosphogluconolactonase n=8 Tax=Suillus TaxID=5379 RepID=A0A0D0BYH7_9AGAM)

HSP 1 Score: 196 bits (497), Expect = 8.220e-56
Identity = 114/251 (45.42%), Postives = 150/251 (59.76%), Query Frame = 1
Query:   28 SPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKILAGLAQAEGIDWSSTKIYFADERCVPLDHSDSNYKAW-DGLFSSSGIPAENV----IAVKTDLSPEAAAADYEATLKAAFPPGKGDASEASDHFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDKAAASQ 765
            SP+ L+  L   I    KE+V  +G F VA+SGGS+PK L  L     + W   +++FADERCVPLDH DSNY      LFS   IP +N+    +++  DL  E  A  YE  L + F      A + S  FP FD  LLG+GPDGHTCSLFP HPLL E  +WVA+IEDSPKPPP+R+TLT+PVLN++  V+FI  GEGKA +L  ++              +  PA+RV+ S    + W VD AA+++
Sbjct:   18 SPNELSENLAAFIVRAQKEAVDKKGRFTVALSGGSLPKQLNKLIDNPAVKWDKWQVFFADERCVPLDHEDSNYNLCRKELFSKVSIPKQNIHHIDVSLLDDL--EELADAYEKALISEF------AQKDSARFPVFDLILLGIGPDGHTCSLFPEHPLLTEEDRWVAYIEDSPKPPPKRITLTFPVLNHALRVVFIAAGEGKADILSTIID----------NPQAGLPASRVTPSHPGQVYWYVDNAASAK 250          
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Match: M4BY53_HYAAE (6-phosphogluconolactonase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BY53_HYAAE)

HSP 1 Score: 195 bits (495), Expect = 9.990e-56
Identity = 115/254 (45.28%), Postives = 152/254 (59.84%), Query Frame = 1
Query:   13 LLVGSSPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKILA-GLAQA-EGIDWSSTKIYFADERCVPLDHSDSNYKAWDG-LFSSSGIPAENVIAVKTDLSPEAAAADYEATLKAAFPPGKGDASEASDHFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDKAAASQ 765
            L V  + D +  ++ Q I  ++K ++     F VA SGGS+PKIL+ GL    + ID+S   +YFADERCVPLDH DSNYKA    L    G+P   V A+   L+P A A DY   L A +            H P FD  LLG+GPDGH CSLFPSHPLL+E++ +VA IEDSPKPP QR+TLTYPVLNN+ N+ F+ TG  KA L+P ++ +           + P PAA V  ++G  + W +D  AA++
Sbjct:    3 LSVSKTIDEVGIDVCQLIVDLSKRAIAKNDRFTVAFSGGSLPKILSKGLPVIRDHIDFSKWFVYFADERCVPLDHDDSNYKACKAALLDDIGVPESQVFAIDASLTPTAMAEDYTKKLAAVW----------GSHVPRFDLILLGMGPDGHMCSLFPSHPLLKEKTLFVASIEDSPKPPSQRITLTYPVLNNAANIAFVATGASKAELMPHMIGIEKR--------TPPLPAANVKPTDGV-VYWFIDNDAAAE 237          
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Match: A0A8K1FBT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBT4_PYTOL)

HSP 1 Score: 196 bits (498), Expect = 1.160e-55
Identity = 116/254 (45.67%), Postives = 158/254 (62.20%), Query Frame = 1
Query:   10 TLLVGSSPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKIL-AGLAQAEG-IDWSSTKIYFADERCVPLDHSDSNYKAW-DGLFSSSGIPAENVIAVKTDLSPEAAAADYEATLKAAFPPGKGDASEASDHFPCFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDKAAAS 762
            T++V ++ D +   + + +   +++++  RG F VA+SGGS+PKIL  G+++ +  +D+S   ++FADERCVPLDH DSN+KA  + LF    IPA+ +  +   LSPE AA DY A L          A+      P FD  LLG+GPDGHTCSLFP HPLL+E   +VA IEDSPKPPPQR+TLTYPV+NN+ +V FI TG  KA L+  +L       LE      P PAA V   +GR + W +D+ A S
Sbjct:   37 TVVVHANADGVGAAVGRLVQERSQQAIATRGKFTVALSGGSLPKILNKGVSEIKDTVDFSKWHVFFADERCVPLDHDDSNFKACKEALFDHVPIPADQIYTLDASLSPEQAAVDYTAKL----------ATIWGSELPRFDLLLLGMGPDGHTCSLFPGHPLLDEHKLFVASIEDSPKPPPQRITLTYPVVNNAAHVAFIATGSSKAPLMAHML------GLEQR--EPPLPAALVQPPQGR-VTWYIDQDAMS 271          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5568.13879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF92_9PHAE8.320e-14880.366-phosphogluconolactonase n=2 Tax=Ectocarpus TaxID... [more]
A0A3F2RX10_9STRA2.110e-5946.516-phosphogluconolactonase n=22 Tax=Phytophthora Ta... [more]
A0A2D4CA35_PYTIN1.790e-5849.406-phosphogluconolactonase n=1 Tax=Pythium insidios... [more]
A0A5D6XPB3_9STRA2.540e-5845.856-phosphogluconolactonase n=1 Tax=Pythium brassicu... [more]
A0A3M6VDW2_9STRA1.120e-5746.436-phosphogluconolactonase n=1 Tax=Peronospora effu... [more]
K3WB39_GLOUD1.400e-5746.646-phosphogluconolactonase n=1 Tax=Globisporangium ... [more]
A0A485KYS3_9STRA3.770e-5644.496-phosphogluconolactonase n=1 Tax=Aphanomyces stel... [more]
A0A0D0BYH7_9AGAM8.220e-5645.426-phosphogluconolactonase n=8 Tax=Suillus TaxID=53... [more]
M4BY53_HYAAE9.990e-5645.286-phosphogluconolactonase n=1 Tax=Hyaloperonospora... [more]
A0A8K1FBT4_PYTOL1.160e-5545.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5568contigL-elsbetiae_contig5568:6760..11592 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score445.3
Seed ortholog evalue2e-122
Seed eggNOG ortholog2880.D8LJ68
KEGG rclassRC00537
KEGG koko:K01057
KEGG ReactionR02035
KEGG Pathwayko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00004,M00006,M00008
Hectar predicted targeting categoryother localisation
EggNOG free text desc.6-phosphogluconolactonase activity
EggNOG OGsCOG0363@1,KOG3147@2759
EC3.1.1.31
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog description6-Phosphogluconolactonase
Ec32 orthologEc-02_004960.1
Exons5
Model size1439
Cds size804
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5568.13879.1prot_L-elsbetiae_contig5568.13879.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5568 7395..11592 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816588.2693493-UTR-L-elsbetiae_contig5568:6759..73941622816588.2693493-UTR-L-elsbetiae_contig5568:6759..7394Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5568 6760..7394 -
1691683667.201551-UTR-L-elsbetiae_contig5568:6759..73941691683667.201551-UTR-L-elsbetiae_contig5568:6759..7394Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5568 6760..7394 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816588.2818737-CDS-L-elsbetiae_contig5568:7394..76101622816588.2818737-CDS-L-elsbetiae_contig5568:7394..7610Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5568 7395..7610 -
1691683667.2181737-CDS-L-elsbetiae_contig5568:7394..76101691683667.2181737-CDS-L-elsbetiae_contig5568:7394..7610Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5568 7395..7610 -
1622816588.2936997-CDS-L-elsbetiae_contig5568:8055..83121622816588.2936997-CDS-L-elsbetiae_contig5568:8055..8312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5568 8056..8312 -
1691683667.2269056-CDS-L-elsbetiae_contig5568:8055..83121691683667.2269056-CDS-L-elsbetiae_contig5568:8055..8312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5568 8056..8312 -
1622816588.3054755-CDS-L-elsbetiae_contig5568:8750..88421622816588.3054755-CDS-L-elsbetiae_contig5568:8750..8842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5568 8751..8842 -
1691683667.2355719-CDS-L-elsbetiae_contig5568:8750..88421691683667.2355719-CDS-L-elsbetiae_contig5568:8750..8842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5568 8751..8842 -
1622816588.3163736-CDS-L-elsbetiae_contig5568:11016..111141622816588.3163736-CDS-L-elsbetiae_contig5568:11016..11114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5568 11017..11114 -
1691683667.245599-CDS-L-elsbetiae_contig5568:11016..111141691683667.245599-CDS-L-elsbetiae_contig5568:11016..11114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5568 11017..11114 -
1622816588.327-CDS-L-elsbetiae_contig5568:11451..115921622816588.327-CDS-L-elsbetiae_contig5568:11451..11592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5568 11452..11592 -
1691683667.2604527-CDS-L-elsbetiae_contig5568:11451..115921691683667.2604527-CDS-L-elsbetiae_contig5568:11451..11592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5568 11452..11592 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5568.13879.1

>prot_L-elsbetiae_contig5568.13879.1 ID=prot_L-elsbetiae_contig5568.13879.1|Name=mRNA_L-elsbetiae_contig5568.13879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=268bp
MTTTLLVGSSPDALATELIQRIGAIAKESVQARGVFNVAVSGGSMPKILA
GLAQAEGIDWSSTKIYFADERCVPLDHSDSNYKAWDGLFSSSGIPAENVI
AVKTDLSPEAAAADYEATLKAAFPPGKGDASEASDHFPCFDAALLGVGPD
GHTCSLFPSHPLLEERSKWVAHIEDSPKPPPQRVTLTYPVLNNSRNVMFI
GTGEGKASLLPQLLKVGADGALESAGASSPYPAARVSVSEGRNLAWCVDK
AAASQCPPEMAALATNC*
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mRNA from alignment at L-elsbetiae_contig5568:6760..11592-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5568.13879.1 ID=mRNA_L-elsbetiae_contig5568.13879.1|Name=mRNA_L-elsbetiae_contig5568.13879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4833bp|location=Sequence derived from alignment at L-elsbetiae_contig5568:6760..11592- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGACGACTTTACTCGTGGGTTCAAGCCCGGACGCCCTTGCCACTGA GCTGATCCAACGAATAGGCGCGATCGCGAAAGAATCGGTACAGGCGCGGG GCGTGTTCAACGTCGCTGTGTCGGGCGGGTCAATGCCGAAGGTATCGGTC CGACGTACAATGCGTGCATGTGCGATTCTCATAACGTTCGCCTCGTTGTC CTTGCTGACTTTGCTACCCCATTGAAGATCACTTGATGTGCTTGTTGGTG TCGGGGGTGTAGGCTTTGAATCGGCGCCTGGAAGCTTGAGATATGAGACA TTCCTATCGTGTCTTGCCAAGCCTGCCTAACGCGCCGACAATACTCCGCA TTCCGCCTCCAGGTCGTAGGTACGATATTGTACCTAAACTACGAACCTTC CCTCTCCGGAAGACAATATCCTTCTCTTGCGGCGCCGTAAACGCGTTATT TCTTTCACATTCAACACAACTAACTCAGATTCTGGCGGGCCTGGCCCAAG CTGAAGGTATCGACTGGAGCTCGACCAAGATATACTTTGCTGATGAGCGC TGCGTCCCGCTGGATCACAGCGACAGGTATGTACCTGTTGTACACCATTC ATCACAATCGTGTGTTGAGAGCTGGCCCAATGAGCCTCTGCGTTTCTCCG TGAGGGATGAGATGGCGCTCTACCAACCCCACTGCCGTAGATACATGGTC TCTCTTAGAGTCGACCCTCCGCTTAATTTTCACCGTAAGACTTGCCCTCT TTGTGGCCAACGCTTAACCATATAGCTGATAGATGTAGTGCGAGAATCGC TGTCCTGTTCAGTGCTACAGACAACAGTAGGTGGCCCGATATAGTGGCAT GTTAGGGCACCCGAACAATATGCCGCTATTCAGGGCAGTGCCGCGATTCC GGTTTGTAGCGGCACTATTGCCGCTATTGAGGAGAAACGGCTTTTGCACA CACAGCATAGTGACAGTGCCTACAGTAGAGGATTGTACGGGCCGCAGCAC CATATCACTCGTACAATAGGTGGTTGGTCGTTTCAAAACGATATCCACAG CAGTGTGTATCCACATGAAAACGTTTCAAGTTCCAACCTCTGCGCACATC ACGTGTAAGATACTACCTGCTCGTCCAAGTGACAACGAGACCTTGGTGTG TAGGCGGACTTGTTAAAAATGTCCGTACGGTGCAGAACCGCACAGCGAAC GTCGCACATATTTATCGTATCGTATCCGGCGGCAACCGGCAGCCACATGT AGGGTTGGAGTTTAACACAAGATCAAAACACGTTGACAGCAGTGTACGCG GAAACAATTGAAGCACCGAAGCAGTGAACGTCGAACACCCCCCCTACCGG ATACATCAATCCCTGCCGTCGCAATGCTCTTCGCATCTATGTACCGAGTG ATTCCACTACGATTGAATACGCGCTCTAATGTTCGACTGCCGTGCGGGTT CAGCGGCACGTGCTACGATGAACCCCATCTTTGCTTTGCGCGGAGAAAAT GCCAAAATACTACGCGATTTGTTCCTAAGGACCAAAAAGCGTAGACAGCT CCGCGGACGATTGCGGCCCCTTCTTCCTCCACCCCCAGTGCTCTCAGAAC CTTAACCTTTGGTGTTGCGTGACTCTAGTCCTTACTTAGATTCGTCAACT CACGTGTTGTTAACCTTCTCTACGGCAATTTCCCCTGCCTCATCAGACAG AGCTTTGGCGAATGCTAAAGTAGGTAATCTTCTACCGTCTTATTTAATGG CAGCAGCGTGGGCAGGCTTGGCCAGAACATCGCATAACTCTGGATCGGTC CAGCACATCTGCCCCCGACGCCGCGGCGGCGTGCACACACACCTACGCTG AGCGTATTTAGTGGGATTTTGCGCAGTTCTAGTCCACGCATACTGGCATG ATGCATGTGGCGCCCACGGTGTGTGTGTGTATGCTTTGGGGAACGGTGTG GCCGGGGCTCCGATGTTTGGAGTTGCCGCTATGTACTGAGGGTATGAGAT GCGTACCCCAAAGTGCCGCCATATCGGATGTCGTCCGATATAGAGGCACA ATGCCGCTATATCGGGTTGAAATTGTGACAAGAGATTTTGATGCCGCTAA TTTATATCGGCAATTCCGCTATTCAGGTTGCCGCTATATCGGGCCACCTA CCGTATGTACTACTACAGTAAGTACATAGTCTACTCTGTGTAGATACAAC GTTCCAATCGGCAAGTGCAGCAGCAAAGTAGCTGCGCGTGCACCATTACC GCGTGGCTTCCCCCCTCCGGTCTATACGTTCCAGACACGTCTTAAACCTC AAGATCCTGCCTAAAAGAATGGGACACCTTGAAAGCAAATCAGTTAAATC AAAAACGGAACCTCACCACTTTAGAGATGAGACTCAGTGGAGTTCAACCG GTATTCCATATATAGTGACGTAATGTTGTTCCGGTCGAGTAGATCAAAAC AGCAATACATGCGTCCGTGCTGGTTGTTTTTGCCGCACGTCTTGAGCCGC CCTCGCTTTATATGTTACAACCTCATTTGTGTCCTGGTTTTCGTTCTCCC CCCCCCCCCCCCCCCCCCCCCTGCCGTTTGGCTCTACTGACCCCCCCTGC CAAAACNNNNNNNNNNTGGTTGTTTTGGCCCCTCGTCTGGGGCCCCCCCC GCTTTGTATTTTTATACCCCCTTTGGGTCTCGGGTTTCGTTTCCCCCCCC CCCCCCCCCTCCCCGACTGTCTGGTTGTTACCAATGACCCCATCGAGAAG CAACTACAAGGCGTGGGACGGGCTGTTTTCTTCGTCGGGTATCCCTGCGG AAAACGTGATCGCTGTCAAGACTGACCTCTCTCCGGAAGCAGGTCAGTGG CGCAAAGTTATCCCCTGACAACCTAGCCTAGCCTCCGAACTGCACACTCC GACTGCTTGTCACCCGCTCTTAATTGTTCCCATATGGCGTGATTCTAGCC TAGGCTGTCTTCTCTTTGTTGCATCGCATCTGGACCCAATCTCAAAAAAA CGATTTTCGGAAAGGCCTCGGCAAGATCTTCCCAAAATCATGCTCTTGGA AATTGGCACCTACATACATACCCTCTCCTTTGTCGATATATCGGGCCGTG AAAAACTACCGTAACCCTGTGCGAACTCACGCATTTTTACCGTACCCCCA GGTCTTCCATCCACTCCGTCTTGCCTACTTCGGATATTATATGCGCACAC CAAAGCTTGAGCAACACGAAGAGCGACCACCTCGTGTGTAACCTTCCCTC CCTCTCTTCTTCTCTCTCTCTATCGCCCAGCTGCGGCAGACTACGAAGCC ACGCTTAAAGCGGCGTTCCCTCCGGGGAAAGGGGACGCCAGCGAAGCATC AGACCACTTCCCGTGCTTTGACGCGGCACTCCTGGGTGTGGGACCCGACG GTCACACGTGCTCTTTGTTTCCGTCGCACCCTCTCCTCGAGGAGCGGTCT AAGTGGGTGGCGCACATCGAGGACTCCCCGAAGCCGCCGCCGCAGAGAGT CACGCTCACGTATCCCGTGCTGAACAACTCGCGAAATGTGGGTGCCGTAG ACTGACTGACGGGTGTGTAAGGGTGCTTACACGTGTTTAGCTTGCCGGCG TTTGTGTTGATTATGTGGCTGCGGGCAGTTGCAACCCTTCGATGTAGCTG GTGCTGCTGCTGTACCAGGGTCAGCAACTCCTTTGTCACAGCTTTGTGGG CGTCGCCTGGGATTGTTTGAGAGCTATGCATGCATGTGTGTAATCTCGCT GAATGATTGTGCGAGGAAGGTCGTCTTTCCGGACGCACTTTTCAGGAGGA CAAAGCTGCTGTGTGTTGGCTTTTCCTACAGGTACGATAGCAAATGATGG AGGTTGGAACTCATCGCTGGGTACCACACACACGTTTCGTTTTCATTTTC TTCTTGGTGTATCCAGCCTCCGTAACCCCTCTTGCGTGATAAACGACACC CCCCCCCCCCCCACGCGCTCCTCCCCCACCAGGTGATGTTCATCGGAACC GGAGAAGGGAAAGCCTCCCTTCTTCCTCAACTCCTCAAAGTCGGCGCCGA CGGCGCGCTCGAGTCGGCCGGGGCGTCATCCCCTTACCCGGCGGCTAGGG TGTCGGTGTCCGAAGGGCGCAACCTGGCGTGGTGCGTCGACAAAGCGGCG GCGTCTCAGTGCCCTCCGGAGATGGCGGCCCTGGCAACCAATTGCTGACT GGTTCTTCGTTTTTTCTTCTTCTTCTTATGTATTTCCAGTGCTCGATGGG CTCCTTGTCACGAGGGCATCTTGCCAGAGTACTGAACCGTGGTGACACAG AAAGGTTATTTTTTACCCGAAGCCCCCACTCCCCCCTTTCTGCGGTGCTT GCCTAAGTTTTTTGTCGCGAGAAGGCTCAGCCGTCCCTTTCCCTCGTCGA CGGTGAGGTCGAAGTTTGTAGCTCTTCGTTGCCTGGTGGAAAATGACTAG AGAAGGAACGTGGGGCTGAGCGCGATACGTTATTGGGATATGTTGTAGCC GAGACAGTGTTACGATCGAAGCCGGTTGTTCTCACCCCTCCCCCCCCCAA ATTGTGCAGCTTGGCGCGGGGGGTGATTTTCGTGTTACATACCTTTGAGT TTGATGTGGTATGTAGTCTACGGACGTATTAAGCAACGCATTCAATGCCG TCCGATCGTTAATCATCTGCGCTGGCGGCACGTGCTAAGGCGTTGTCTTC GTCTTTGAACAAAATACAGCATTGACTGACCTCTGCCATCCGAATACCTG CAAAATTACTGCCGCGGTCACGGGTTCACATGCTGAGGTCCATGCATAAT CTGTGAAGCATCAACCGAGCCAGAAACCAGGTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5568:6760..11592-

>mRNA_L-elsbetiae_contig5568.13879.1 ID=mRNA_L-elsbetiae_contig5568.13879.1|Name=mRNA_L-elsbetiae_contig5568.13879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1608bp|location=Sequence derived from alignment at L-elsbetiae_contig5568:6760..11592- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGACGACTTTACTCGTGGGTTCAAGCCCGGACGCCCTTGCCACTGA
GCTGATCCAACGAATAGGCGCGATCGCGAAAGAATCGGTACAGGCGCGGG
GCGTGTTCAACGTCGCTGTGTCGGGCGGGTCAATGCCGAAGATGACGACG
ACTTTACTCGTGGGTTCAAGCCCGGACGCCCTTGCCACTGAGCTGATCCA
ACGAATAGGCGCGATCGCGAAAGAATCGGTACAGGCGCGGGGCGTGTTCA
ACGTCGCTGTGTCGGGCGGGTCAATGCCGAAGATTCTGGCGGGCCTGGCC
CAAGCTGAAGGTATCGACTGGAGCTCGACCAAGATATACTTTGCTGATGA
GCGCTGCGTCCCGCTGGATCACAGCGACAGATTCTGGCGGGCCTGGCCCA
AGCTGAAGGTATCGACTGGAGCTCGACCAAGATATACTTTGCTGATGAGC
GCTGCGTCCCGCTGGATCACAGCGACAGCAACTACAAGGCGTGGGACGGG
CTGTTTTCTTCGTCGGGTATCCCTGCGGAAAACGTGATCGCTGTCAAGAC
TGACCTCTCTCCGGAAGCAGCAACTACAAGGCGTGGGACGGGCTGTTTTC
TTCGTCGGGTATCCCTGCGGAAAACGTGATCGCTGTCAAGACTGACCTCT
CTCCGGAAGCAGCTGCGGCAGACTACGAAGCCACGCTTAAAGCGGCGTTC
CCTCCGGGGAAAGGGGACGCCAGCGAAGCATCAGACCACTTCCCGTGCTT
TGACGCGGCACTCCTGGGTGTGGGACCCGACGGTCACACGTGCTCTTTGT
TTCCGTCGCACCCTCTCCTCGAGGAGCGGTCTAAGTGGGTGGCGCACATC
GAGGACTCCCCGAAGCCGCCGCCGCAGAGAGTCACGCTCACGTATCCCGT
GCTGAACAACTCGCGAAATCTGCGGCAGACTACGAAGCCACGCTTAAAGC
GGCGTTCCCTCCGGGGAAAGGGGACGCCAGCGAAGCATCAGACCACTTCC
CGTGCTTTGACGCGGCACTCCTGGGTGTGGGACCCGACGGTCACACGTGC
TCTTTGTTTCCGTCGCACCCTCTCCTCGAGGAGCGGTCTAAGTGGGTGGC
GCACATCGAGGACTCCCCGAAGCCGCCGCCGCAGAGAGTCACGCTCACGT
ATCCCGTGCTGAACAACTCGCGAAATGTGATGTTCATCGGAACCGGAGAA
GGGAAAGCCTCCCTTCTTCCTCAACTCCTCAAAGTCGGCGCCGACGGCGC
GCTCGAGTCGGCCGGGGCGTCATCCCCTTACCCGGCGGCTAGGGTGTCGG
TGTCCGAAGGGCGCAACCTGGCGTGGTGCGTCGACAAAGCGGCGGCGTCT
CAGTGCCCTCCGGAGATGGCGGCCCTGGCAACCAATTGCTGAGTGATGTT
CATCGGAACCGGAGAAGGGAAAGCCTCCCTTCTTCCTCAACTCCTCAAAG
TCGGCGCCGACGGCGCGCTCGAGTCGGCCGGGGCGTCATCCCCTTACCCG
GCGGCTAGGGTGTCGGTGTCCGAAGGGCGCAACCTGGCGTGGTGCGTCGA
CAAAGCGGCGGCGTCTCAGTGCCCTCCGGAGATGGCGGCCCTGGCAACCA
ATTGCTGA
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