mRNA_L-elsbetiae_contig5568.13878.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Match: D8LJ69_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ69_ECTSI) HSP 1 Score: 394 bits (1012), Expect = 7.740e-128 Identity = 233/338 (68.93%), Postives = 258/338 (76.33%), Query Frame = 1 Query: 1 LSSFYTAINWAGTAVFRRERKANKHTFDRRQWTLVALLSVCTALNTLIGRANIAVPTTFDQA*QMLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSAASVSLVCIVLNAIKVVINSEMLTGEYKVTPLHLLSRVSPMTLAQVSTFAVFHGEVTGMLGHWSEILTGWAPHVIALTGFVSFILTVLSMHATKFATPLTVSVMGALKQILVAGFTVFKMQRSVSRLNVVGLVFALVGAVRYTIVSRREKKRRERRDAISSGSAKKAAQPPRGKGPAAPLLPVTAASTTAVKIPSSARGSSVMVNGKRTVG----GDERKGGKV 1002 LSSFYTAINWAGTAVFRRERK +K FDRRQWTLV+LLSV TALNTL+GRANIAVPTTFDQ MLQAVGPLLVLLLATRVFKRSVS ERK+AVIPI+VGVAM WYSEME+SRSA +VS VCIVLNAIKVVINSEMLTGEYK +STFA+ HGEV+G++G W EI GWAPHVIALTG SF+LTV+S+HATKFATPLTVSV+GALKQILV F+V +M RSVSRLNV+GLV LVGAVRYTIVSR E++ RE+R A S+GSA G A +LP T S PS AR VMVNGKR GD R+GG V Sbjct: 17 LSSFYTAINWAGTAVFRRERKTSKQAFDRRQWTLVSLLSVSTALNTLVGRANIAVPTTFDQ---MLQAVGPLLVLLLATRVFKRSVSMERKVAVIPIMVGVAMTWYSEMEVSRSAFTVSAVCIVLNAIKVVINSEMLTGEYK-----------------MSTFALVHGEVSGVVGRWREISMGWAPHVIALTGIASFVLTVMSLHATKFATPLTVSVLGALKQILVVAFSVLRMNRSVSRLNVLGLVLVLVGAVRYTIVSRSERRSREKRGATSAGSA----------GNKASVLPTTVPSIG----PSDAR---VMVNGKRAEAKRGDGDIRRGGGV 317
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Match: D7FYJ9_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYJ9_ECTSI) HSP 1 Score: 177 bits (448), Expect = 1.620e-45 Identity = 107/307 (34.85%), Postives = 181/307 (58.96%), Query Frame = 1 Query: 1 LSSFYTAINWAGTAVFRRERKANKHTFDRRQWTLVALLSVCTALNTLIGRANIA-VPTTFDQA*QMLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSAAS---------VSLVCIVLNAIKVVINSEMLTGEYKVTPLHLLSRVSPMTLAQVSTFAVFHGEVTGMLGHWSEILTGWAPHVIALTGFVSFILTVLSMHATKFATPLTVSVMGALKQILVAGFTVFKMQRSVSRLNVVGLVFALVGAVRYTIVSRREKKRRERRDAISSGSAKKAAQPPR-GKGPAAPLLP 888 +S+F+ NW GT V+ + T R+QW + + SV ALN +G + + VP TF+Q +++++ P++V+++ T+VF ++ SR RK+AV+PIV GV MA Y + + + V++ C++L+ +K V++ EMLTG+ K+ PL LLSR++P+ L Q++ A+ GEV+ ++ +W EI GWA + +A+TG SF L + S+ A K +PLT+S+M +KQ+L+ + + + S LN G V ++ + RY+++S E+ + S K +PP G G + PLLP Sbjct: 62 MSAFHMFCNWLGTVVYFARSGEEQQTIKRQQWPTLIMFSVVFALNISVGNTSSSMVPVTFNQ---VMRSLVPVIVMVIGTQVFGKTFSRARKLAVLPIVAGVIMACYPDSASDSNPEARPFRAVGVIVTVFCVMLSGLKNVVSGEMLTGDIKMPPLQLLSRMAPLALVQMAVGALALGEVSSLVANWREIREGWALYGVAITGVGSFSLNLCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNK--------SREVKALIEPPEIGIGKSLPLLP 357
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Match: A0A482SCD9_9ARCH (TPT domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCD9_9ARCH) HSP 1 Score: 150 bits (379), Expect = 1.070e-36 Identity = 94/266 (35.34%), Postives = 151/266 (56.77%), Query Frame = 1 Query: 1 LSSFYTAINWAGTAV-FRRERKANKHTFDRRQWTLVALLSVCTALNTLIGRANIA-VPTTFDQA*QMLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSAASVSLVCIVLNAIKVVINSEMLTGEYKVTPLHLLSRVSPMTLAQVSTFAVFHGEVTGMLGHWSEILTGWAPHVIALTGFVSFILTVLSMHATKFATPLTVSVMGALKQILVAGFTVFKMQRSVSRLNVVGLVFALVGAVRYTIVSRREK 792 LS+ + A N G V F R T + + SV +LN IG A++ V F+Q + +A+ P++VL++ FKR+ S+ERK AV+PIVVGVA A+Y +M + + C+VL A+K VI E+LTG+ K++ + LL ++ P+ L Q+ T ++ +GEV ++ +W + AP V+ LTG +SF L V S A K +PLT+ + +KQ+L+ F VS +N +G++ ++G+ RY +V+ EK Sbjct: 43 LSAIHMACNIIGAQVYFLWNRNVKPKTIEGPNRRSILFFSVIFSLNIAIGNASLQYVSVNFNQ---VCRALVPVIVLVVTMVYFKRAYSQERKWAVVPIVVGVATAFYGDMRYTTIGIVYTGFCVVLAALKAVIGGELLTGDLKLSEMDLLYKMCPLALLQLGTISILNGEVAAIMSNWDTLSVSSAPQVVLLTGVLSFSLNVSSFIANKVTSPLTLCIAANIKQVLLVAFGTIYFGDHVSLINGLGIMIVIIGSYRYGVVTISEK 305
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Match: A0A7S2SVZ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVZ2_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.620e-29 Identity = 87/265 (32.83%), Postives = 147/265 (55.47%), Query Frame = 1 Query: 1 LSSFYTAINWAGT----AVFRRERKANKHTFDRRQWTLVALLSVCTALNTLIGRANIA-VPTTFDQA*QMLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSAASVSLVCIVLNAIKVVINSEMLTGEYKVTPLHLLSRVSPMTLAQVSTFAVFHGEVTGMLGHWSEILTGWAPHVIALTGFVSFILTVLSMHATKFATPLTVSVMGALKQILVAGFTVFKMQRSVSRLNVVGLVFALVGAVRYTIVS 780 LS+ + A N GT VF ERK K+ Q ++A S+ A N IG A++ V F+Q +++++ P +V+++ ++ F +S S +RK ++P+++GV +A + EM S V+ C++L A KVV+++ MLTGE+K+ PL LLSR+ P+ ++ T A +GE+ + W E+ A V+ ++G SF L + S +A K + LT+SV KQ+L+ ++ +N VG + L G+ Y+ VS Sbjct: 111 LSAVHMACNTIGTLVYFGVFSEERKKRKNLGIDGQRRILAF-SLIFAANIAIGNASLKYVSVNFNQ---VMRSLVPGVVMVIGSQFFGKSHSADRKRTLVPVIIGVMLACFGEMHFSYLGFFVTCFCVLLAAAKVVLSNVMLTGEFKLGPLDLLSRMCPLAFVEIITVAFLNGELAALAADWPELSQSKAIPVVLISGIASFTLNITSFYANKMTSALTLSVAANAKQVLMIVIATIVFGTPMNAVNGVGTMIVLAGSAWYSQVS 371
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Match: A0A7S2EE68_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EE68_TRICV) HSP 1 Score: 126 bits (316), Expect = 1.350e-27 Identity = 82/246 (33.33%), Postives = 142/246 (57.72%), Query Frame = 1 Query: 82 DRRQWTLVALLSVCTALNTLIGRANIA-VPTTFDQA*QMLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSAASVSLVCIVLNAIKVVINSEMLTGEYKVTPLHLLSRVSPMTLAQVSTFAVFHGEVTGMLGHW-SEILTGWAPH---VIALTGFVSFILTVLSMHATKFATPLTVSVMGALKQILVAGFTVFKMQRSVSRLNVVGLVFALVGAVRYTIVSRREKKRRE 804 DR ++ SV +LN +G ++ V F+Q +++++ P + +++ + K+ +SR+R +AVIPIV+GVAMA + +M S +++ C++L A+KVV + EMLTG K+ P+ LL ++P+ + Q + GE+ + W +E+ P V+ L+G SF L + S+ A K +PLT+ + +KQ+L+ F+ Q ++ LN G+V LVG+ RY+ VS EKKR++ Sbjct: 94 DRGGQKMILAFSVIFSLNIAVGNVSLKYVSVNFNQ---VMRSLVPAITIVMGLTL-KKPISRQRIVAVIPIVIGVAMACFGDMSYSWLGFFITVGCVLLAALKVVASGEMLTGNIKLHPVDLLGHMAPLAMIQCLILSFLTGEIWSISRRWDAELNPSINPQPLSVVLLSGVFSFSLNICSLMANKLTSPLTLCIAANVKQVLMIAFSTIIFQTEITPLNGFGIVVVLVGSARYSYVSVLEKKRQD 335
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Match: A0A7S3VAQ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAQ9_9STRA) HSP 1 Score: 125 bits (313), Expect = 5.430e-27 Identity = 79/249 (31.73%), Postives = 148/249 (59.44%), Query Frame = 1 Query: 76 TFDRRQWT-----LVALLSVCTALNTLIGRANIA-VPTTFDQA*QMLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSAASVSLVCIVLNAIKVVINSEMLTGEYKVTPLHLLSRVSPMTLAQVSTFAVFHGEVTGMLGHWS-EILTGWAPH---VIALTGFVSFILTVLSMHATKFATPLTVSVMGALKQILVAGFTVFKMQRSVSRLNVVGLVFALVGAVRYTIVSRREK 792 T R+Q T LV L SV +LN IG A++ V F+Q +++++ P + +++ + K ++SR+R++AV+P+++GVAMA + +M + V+++C++L A+KVV + EMLTG K+ P+ LLS+++P+ + Q ++ GE+T ++ W+ ++ P+ +I L+G +F L + S+ A K +PLT+ + +KQ+++ + Q +S +N G+ L G+ +Y+ VS EK Sbjct: 104 TITRKQVTGRNKVLVLLYSVIFSLNIAIGNASLRYVSVNFNQ---VMRSLVPAITIVMGLCLGK-NISRKRQLAVVPVIIGVAMATFGDMSFTTFGLFVTVLCVLLAALKVVASGEMLTGSLKMHPVDLLSKMAPLAMGQCFVLSIVSGELTAIVKRWNVDLNPAIDPYPLTIILLSGVAAFSLNISSLMANKLTSPLTLCIAANVKQVMMIAISTLIFQTDISFMNGFGIFVVLCGSAQYSFVSMAEK 348
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Match: A0A7S2VF30_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VF30_9STRA) HSP 1 Score: 120 bits (301), Expect = 4.590e-26 Identity = 85/284 (29.93%), Postives = 150/284 (52.82%), Query Frame = 1 Query: 70 KHTFDRRQWTLVALLSVCTALNTLIGRANIA-VPTTFDQA*QMLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSAASVSLVCIVLNAIKVVINSEMLTGEYKVTPLHLLSRVSPMTLAQVSTFAVFHGEVTGMLGHWSEILTGWA---PHVIAL-TGFVSFILTVLSMHATKFATPLTVSVMGALKQILVAGFTVFKMQRSVSRLNVVGLVFALVGAVRYTIVSRREKKRRERRDAISSG------SAKKAAQPPRGKGPAAPLLP 888 + T D+ L+ S +LN IG ++ V F+Q +++++ P + + + + K + S R++AV+P+++GVAMA + +M + +++CI+L A+KVV + EMLTG K+ P+ LL ++P+ L Q FA F GE+T + W + L + P ++ + +G SF L + S+ A K +PLT+ + +KQ+L+ + +S LN G++ L+G+ RY+ VS EK ++ + +K A P G G A L+P Sbjct: 34 RQTLDKSGKRLILAFSFIFSLNIAIGNVSLKYVSVNFNQ---VMRSLVPAITIAMGMALGKPT-SLRRQLAVLPVIMGVAMACFGDMSYTALGFFYTVMCILLAALKVVASGEMLTGSLKLHPVDLLGHMAPLALVQCIVFAFFTGEITSIASRWEKELNPFVNIYPFLVVVGSGVASFTLNISSLQANKLTSPLTLCIAANVKQVLMIAMSTVLFNIDISPLNGAGILVVLMGSARYSYVSVMEKSAPKQSSDVKMSPKTTEPDEEKGALLPSGSGKEAELVP 313
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Match: A0A7S2YCI9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YCI9_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.340e-25 Identity = 79/259 (30.50%), Postives = 139/259 (53.67%), Query Frame = 1 Query: 31 AGTAVFRRERKANKHTFDRRQWTLVALLSVCTALNTLIGRANIA-VPTTFDQA*QMLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSAASVSLVCIVLNAIKVVINSEMLTGEYKVTPLHLLSRVSPMTLAQVSTFAVFHGEVTGMLGHWSEILTGWAPH----VIALTGFVSFILTVLSMHATKFATPLTVSVMGALKQILVAGFTVFKMQRSVSRLNVVGLVFALVGAVRYTIVSRREK 792 A + + + + T D++ L+ SV +LN IG ++ V F+Q +++++ P + + + + R S +R++AV+P++VGVAMA + +M + +++CI L A+KVV + EMLTG K+ P LL ++P+ Q T + GEVT ++ W+ L+ W V+ L+G +SF + S+ A K +PLT+ + G +KQ+L+ G ++ LN G++ L G+ Y+ VS EK Sbjct: 123 AESCITKMLGNVQRQTLDKKGKNLILAFSVIFSLNIAIGNVSLQYVSVNFNQ---VMRSLVPAITIAMGFAL-GRPTSFQRQLAVLPVIVGVAMACFGDMSYTWLGFFYTVMCIFLAALKVVSSGEMLTGHLKLHPFDLLGHMAPLAFVQCLTMSFATGEVTSIIARWNTELSPWVDIYPMLVVMLSGVLSFTFNISSLQANKLTSPLTLCIAGNVKQVLMIGIATVIFSVEITPLNGAGIMVVLAGSGWYSYVSIMEK 377
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Match: A0A6U0HVW1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0HVW1_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.090e-25 Identity = 74/242 (30.58%), Postives = 137/242 (56.61%), Query Frame = 1 Query: 82 DRRQWTLVALLSVCTALNTLIGRANIA-VPTTFDQA*QMLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSAASVSLVCIVLNAIKVVINSEMLTGEYKVTPLHLLSRVSPMTLAQVSTFAVFHGEVTGMLGHWSEILTGWA-PH---VIALTGFVSFILTVLSMHATKFATPLTVSVMGALKQILVAGFTVFKMQRSVSRLNVVGLVFALVGAVRYTIVSRREK 792 DR L+ SV +LN IG ++ V F+Q +++++ P + +++ + ++++S+ R+IAV+P+V+GVAMA + +M + +++C++L A+KVV + EMLTG K+ P+ LL ++P+ + Q + GEV+ + W L + P+ ++ +G SF L + S+ A K +PLT+ + +KQ+L+ F+ ++ LN +G+V L G+ Y+ VS EK Sbjct: 13 DRSGKKLILSFSVIFSLNIAIGNVSLRHVSVNFNQ---VMRSLVPAVTIIMGL-MLRKNISKNRQIAVVPVVIGVAMACFGDMSYTPLGFFYTVLCVLLAALKVVASGEMLTGNLKLHPVDLLGHMAPLAMVQCLVLSFVTGEVSSIASRWEAELNPFVHPYPLFIVVTSGVFSFSLNICSLMANKLTSPLTLCIAANVKQVLLIAFSTIVFGTEITFLNGMGIVVVLAGSSWYSYVSMAEK 250
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Match: A0A7S2YK27_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YK27_9STRA) HSP 1 Score: 120 bits (300), Expect = 3.260e-25 Identity = 88/282 (31.21%), Postives = 143/282 (50.71%), Query Frame = 1 Query: 25 NWAGTAVFRRERKANKHTFDRRQWTLVALLSVCTALNTLIGRAN-IAVPTTFDQA*QMLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSAASVSLVCIVLNAIKVVINSEMLTGEYKVTPLHLLSRVSPMTLAQVSTFAVFHGEVTGMLGHWSEILTGWAPH------VIALTGFVSFILTVLSMHATKFATPLTVSVMGALKQILVAGFTVFKMQRSVSRLNVVGLVFALVGAVRYTIVSRREKKRRE----RRDAISSGSAK 837 +W T E+K D + L+ SV + N IG + I V F+Q +++++ P + + + + K + S +R+IAVIP++VGVAMA + +M S + +C+ L A+KVV + E+LTG+ K+ P LL ++P+ L Q ++ GEV +L W + W P ++ LTG +S V S+ K +PLT+ V +KQ+L+ G + +S LN G+ L G+ Y+ VS EK + R+ AI S SA+ Sbjct: 36 SWITTLFGDLEKKE----LDAKGKRLILAYSVLFSANLCIGNVSLIYVSVNFNQ---VMRSLVPAVTIFMGYFINKPT-SFQRQIAVIPVIVGVAMACFGDMSFSTIGFGYTSLCVFLAALKVVASGEILTGDLKLHPFDLLRHMTPLALVQCLIMSIATGEVQEILQRWPTDFSPWGPKGLYPSSIVNLTGLISLTFNVSSLQVNKLTSPLTLCVAANVKQVLMIGIATAVFETEISPLNAAGIAIVLAGSAWYSYVSSMEKAAAKALGNRQTAIRSSSAR 309 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5568.13878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5568.13878.1 >prot_L-elsbetiae_contig5568.13878.1 ID=prot_L-elsbetiae_contig5568.13878.1|Name=mRNA_L-elsbetiae_contig5568.13878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=296bp MLQAVGPLLVLLLATRVFKRSVSRERKIAVIPIVVGVAMAWYSEMEISRSback to top mRNA from alignment at L-elsbetiae_contig5568:1435..6724+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5568.13878.1 ID=mRNA_L-elsbetiae_contig5568.13878.1|Name=mRNA_L-elsbetiae_contig5568.13878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5290bp|location=Sequence derived from alignment at L-elsbetiae_contig5568:1435..6724+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5568:1435..6724+ >mRNA_L-elsbetiae_contig5568.13878.1 ID=mRNA_L-elsbetiae_contig5568.13878.1|Name=mRNA_L-elsbetiae_contig5568.13878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1776bp|location=Sequence derived from alignment at L-elsbetiae_contig5568:1435..6724+ (Laminarionema elsbetiae ELsaHSoW15)back to top |