mRNA_L-elsbetiae_contig5567.13876.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: D8LQL2_ECTSI (Similar to putative transmembrane protein 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL2_ECTSI) HSP 1 Score: 306 bits (784), Expect = 5.510e-103 Identity = 152/203 (74.88%), Postives = 170/203 (83.74%), Query Frame = 2 Query: 35 MFRRRGS--YRRLSVTTAVASNVNANDAYRENPRADRSRYASEISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEEFLSRPEGEEHARLL 637 MFRRRG Y+RL V +++ + YRENP ADRSRYASEISSSL LQIL+YYNGL S YFVL GGL+IEKLYN +F S LQRT+LAP+F+ WAIAEVHR YFG KGNIKEMVPHMCAFLL T+FPQMFCLAFLAFFQEHQFP+DPI+G+I+I FL E +VGYNGIKAIINKRTAQFFRVAQEE+L RP EEHARLL Sbjct: 1 MFRRRGGAGYQRLRVAATDSTHHDVGVTYRENPSADRSRYASEISSSLSLQILIYYNGLLSLIYFVLGGGLVIEKLYNYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEEYLLRPASEEHARLL 203
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A836CA77_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA77_9STRA) HSP 1 Score: 157 bits (396), Expect = 6.870e-45 Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 2 Query: 143 RYASEISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEE 595 RY SE SSSLP Q+L+Y+N +FS YF++ G L+I K+ F+SPLQR + AP F+IWA+ EV R+YFG GNI+EMVP M AF+L T+FPQ + +L FQE FP D +G + L E V G +++I KRTAQF R+ Q E Sbjct: 1 RYQSETSSSLPAQVLMYFNVMFSIIYFIMEGSLVIMKMSQYVFDSPLQRIVCAPAFMIWALVEVFRLYFGYSGNIEEMVPQMTAFVLMTVFPQSLVVLYLTTFQEFVFPADAAMGGTMLALLAAETVAGAGAVRSIARKRTAQFHRMVQTE 151
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A8J2SKP3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKP3_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.930e-36 Identity = 70/151 (46.36%), Postives = 94/151 (62.25%), Query Frame = 2 Query: 155 EISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEEFLSR 607 EI SSL LQ +++Y G+FS YF + GG ++ KL N KF + + L P+F +W E+ RI G GN+ E VP + AFLL TIFPQ+ + FL F Q+ FP D GS+ I FL+ EL VG K +I ++TAQFFR+ QEE + R Sbjct: 11 EIKSSLGLQQVIFYQGMFSLLYFAICGGCLLNKLQNYKFQNSILFILTLPIFSLWCCIEIVRIGLGYIGNLLEKVPMISAFLLLTIFPQLVAILFLTFLQDPVFPFDTAAGSMMILFLLSELYVGRLTFKTLIERQTAQFFRLCQEEEMER 161
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A7S2V551_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V551_9STRA) HSP 1 Score: 133 bits (335), Expect = 4.110e-35 Identity = 66/148 (44.59%), Postives = 95/148 (64.19%), Query Frame = 2 Query: 158 ISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEEFL 601 ++SS+ L IL+Y + + S YF L G LI+ KL + F SPL + LL P F+I I + R YFG +GN+KE VP + AFL+ T FP F +A++ F QE +P D +IG + I ++ E GY +K +IN++TA+FFR+ QEE L Sbjct: 34 VASSVSLHILLYLDSMVSIVYFFLGGSLILHKLSSFDFVSPLHQLLLIPCFIILLICDTSRFYFGFQGNLKERVPQVIAFLMITFFPTFFVMAYMTFVQEVLYPFDVVIGWMFIMLMLLEFYFGYRCVKRLINRQTARFFRLCQEEEL 181
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A7R9UGE4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGE4_9STRA) HSP 1 Score: 132 bits (331), Expect = 5.480e-35 Identity = 65/147 (44.22%), Postives = 95/147 (64.63%), Query Frame = 2 Query: 155 EISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEE 595 E+SS LPLQ+L+Y+N LFS + L + KL ++ S L R L AP V+W +AE R++FG +GN+ E VP + AFL+ + FPQ+ C+ FL++FQ P D I G+I FL+ EL GY ++ +I K+T+QFFR+ QE+ Sbjct: 10 EVSSHLPLQVLLYFNALFSFCFMALEITNVAYKLQYYQYESNLLRLLTAPALVLWTVAEAFRLFFGFRGNLAERVPLLAAFLIVSFFPQLPCILFLSYFQGILLPFDIIGGTILFVFLLAELGFGYQALRRLIRKQTSQFFRLVQED 156
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: F0YGR8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGR8_AURAN) HSP 1 Score: 120 bits (302), Expect = 7.700e-31 Identity = 59/130 (45.38%), Postives = 85/130 (65.38%), Query Frame = 2 Query: 218 YFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEEFLSR 607 YFV+ GG ++ K+YN +F + + + L P+F++W+ E+ R+ G GNIKE VP + AFLL T+FPQ+ + F A Q+ FP D GSI I +LV EL VG +K +I ++TAQFFR+ QEE + R Sbjct: 3 YFVVCGGCLLNKIYNYEFQNGILKILTLPIFLLWSCTELARVALGYIGNIKERVPMISAFLLLTMFPQVVAVFFFAILQDPVFPFDRAAGSIMIFYLVIELFVGRFTLKTLIQRQTAQFFRLCQEEEIRR 132
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A0L0D7S4_THETB (Transmembrane protein 17 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D7S4_THETB) HSP 1 Score: 94.4 bits (233), Expect = 1.430e-19 Identity = 49/142 (34.51%), Postives = 87/142 (61.27%), Query Frame = 2 Query: 152 SEISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFF 577 +++++SL LQ+L+YY+GLFS + ++ ++ K NL ++P+ + + VFVIWA+ E RI+FG GN+KE VP + A L +FPQ+ L +LA FQ P + + I + ++ VG+ ++++ +T+QF+ Sbjct: 20 TQMAASLLLQMLLYYSGLFSLMWGIITACIMAWKWDNLD-DAPVFQYITMVVFVIWAVVEPLRIWFGFVGNLKEKVPQLAAHCLLNVFPQIPVLIYLAAFQPSLLPFERVANVIQLLLVIVSAGVGFATTRSLVRNQTSQFY 160
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A0H5RTX2_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RTX2_9EUKA) HSP 1 Score: 89.7 bits (221), Expect = 2.370e-18 Identity = 49/141 (34.75%), Postives = 80/141 (56.74%), Query Frame = 2 Query: 155 EISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFV-IWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQF 574 ++SSSL LQIL+YYN +S Y V+ ++I K+ ++L P+ + IW + E R+ GN++E + H+ AF T+FPQ F + ++ Q+H + SI IGFLV EL++GY+ I+ I+ + +F Sbjct: 34 QMSSSLSLQILLYYNVWYSGLYAVV--NILITSFKISKYKDDQFVSVLTPILLGIWCLVEPCRLALAYAGNLQERIQHLAAFFFLTLFPQAFLVVYVLAIQKHVLTGETTSASIQIGFLVAELIIGYHTIQYIVKIQATRF 172
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A8J5XUQ2_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUQ2_DIALT) HSP 1 Score: 86.3 bits (212), Expect = 5.950e-17 Identity = 52/140 (37.14%), Postives = 82/140 (58.57%), Query Frame = 2 Query: 164 SSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPV-FVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQF--PIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQF 574 +++PLQ+L+Y+N ++S A+ L L + K Y+ + + L L P+ F IWA+ E R++FG GN+ E V ++ AF L T+FPQ+F A L F F P + I G++ + L E V Y+ + +I+K TAQF Sbjct: 50 ANVPLQMLIYFNSIYSVAWGALWISLYVYK-YS-YWKADLVSAFLNPILFAIWALIEPLRLWFGNSGNLSEKVGNLAAFFLLTLFPQLF--AHLLFLGAPSFLLPFEAISGALMLVLLAAEAYVSYHATRTLIHKSTAQF 185
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: UPI0014257812 (transmembrane protein 17-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257812) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-14 Identity = 47/163 (28.83%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 143 RYASEISSSLPLQILVYYNGLFSAAYFVLMGGLI-IEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEEFLSRPEGEEHA 628 R +EI +SLPLQ+ +Y+N F + + ++ ++ LY + N + T V+VI + EV R+Y G GN++E VP + F L T+ Q+ AF+ FP++ + + +GF+VFE+++GY +K + N + +F ++ + G ++ Sbjct: 34 RPGNEIVTSLPLQMALYFNVFFFPFWIITCIVMLDLKFLYLQEINQFIYIT----VYVIMSGTEVMRLYLGYLGNLQERVPELAGFWLLTLVLQLPLCAFILLIGSMPFPVERAVHIVFLGFVVFEVIIGYIALKVMSNHQVMKFHLQQFDDVIEMQNGHPYS 192 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5567.13876.1 >prot_L-elsbetiae_contig5567.13876.1 ID=prot_L-elsbetiae_contig5567.13876.1|Name=mRNA_L-elsbetiae_contig5567.13876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp MFRRRGSYRRLSVTTAVASNVNANDAYRENPRADRSRYASEISSSLPLQIback to top mRNA from alignment at L-elsbetiae_contig5567:3765..6211- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5567.13876.1 ID=mRNA_L-elsbetiae_contig5567.13876.1|Name=mRNA_L-elsbetiae_contig5567.13876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2447bp|location=Sequence derived from alignment at L-elsbetiae_contig5567:3765..6211- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5567:3765..6211- >mRNA_L-elsbetiae_contig5567.13876.1 ID=mRNA_L-elsbetiae_contig5567.13876.1|Name=mRNA_L-elsbetiae_contig5567.13876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig5567:3765..6211- (Laminarionema elsbetiae ELsaHSoW15)back to top |