mRNA_L-elsbetiae_contig556.13869.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig556.13869.1
Unique NamemRNA_L-elsbetiae_contig556.13869.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Match: D7FVZ6_ECTSI (C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ6_ECTSI)

HSP 1 Score: 598 bits (1543), Expect = 3.260e-207
Identity = 360/600 (60.00%), Postives = 401/600 (66.83%), Query Frame = 1
Query:    1 GDGSQPRACRILILGDGNFSFSLALAKAL--PPSS----------------EIVATSFDGPVDLLGKYPESPGIVAALRSLGVSVLHNVDATAPDARVVEVEEAEASPGGGCGCPGQQRQYEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVETGIVGEGGGGVVAS--GVADRHHCGAESILAPGGAVHVTLALDQPERWGLQEQAARHGFSLAHRRRFPAEQIDGYMTKRHQTGRSFQQRVHDSETLSFVWASASGAKAGEGEPATAALGDSTNTLPPWLWTGVNTCGEPSLNA------DGHGGGLGGAAGDGTASAVVDGDRRSEAKADNRKRGXXXXXXXXXXXXXXXXXLAEVCELCGKRYKTSQALRTHTRQFHELGQEGGVPLAPREEEPCPHPSCGRVFTSTRALDQHVSAKHSGNNVDIKPDWFVGSIYHLEPPPPV-VPNSSDSVGAEVVHRSSTATAAAASDQPRLGLAANAEGRDPHAPSEAAVPEATG-------SASVVVSLETSSHTGAWQECDVCGYWFSSPADAQQHLDNLRPPIEGAVTRYDCGTCAKDFGSRRALLQHANFCGGG 1698
            GDG + + CRILILGDGNFSFSLALAKAL  PP+                 EIVATSFDG +DLL KY E+PGIVAALRS+GV+VLHNVDATA D+RV++V     SP        QQ+Q+EHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSA+              G+   GGGG VA+  G+ADR   G  +ILAPGGAVHVTLALDQPERWGL+EQAARHGFSL HRRRFPAE+IDGYMTKRHQTGRSF+QRV  SETLSF WA++  A+A  G+   AA G   +TLPPWLW  V  CG+ +  A      D      G  A D    AV D  R    +   RK G                 L EVCELCGKRYK++QALRTHTRQFHELGQEGGV +AP++EE CPHP+CGRVFTS RALDQHVSAKHSG+NVDIKPDWFVGSIYHLEPP    VP   D V          A  AA SDQ   G A  AE        E   PE  G       + +V  ++E +S     Q CDVCGYWF+SP D QQHLDNLRPPIEGAVTRYDCGTC KDFGSRRALLQHA FC GG
Sbjct:    5 GDGPKRQPCRILILGDGNFSFSLALAKALLLPPTPHLLPSSPQARLQQQTFEIVATSFDGRLDLLSKYAEAPGIVAALRSVGVTVLHNVDATALDSRVLQV-----SPSDRRRAQQQQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAIGSTGPVGGGGSGACGVSDIGGGGAVAAVPGMADRQG-GKGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRRFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAAS--AQAARGDDG-AAFG---STLPPWLWPEVVMCGDEASPARAETATDEPVRAGGSDAVDAPTPAVDDNVR---TRGGGRKGGGCTDRTGAAAAEAL---LPEVCELCGKRYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPNCGRVFTSDRALDQHVSAKHSGDNVDIKPDWFVGSIYHLEPPXXXXVPTDGDMVVERGQDGGIPAANAAGSDQICRGTAEGAEATTTPKVVETP-PEMLGVPAREVPATTVCTNIEGNS---LCQRCDVCGYWFTSPEDLQQHLDNLRPPIEGAVTRYDCGTCVKDFGSRRALLQHAKFCSGG 582          
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Match: W7TQ78_9STRA (C2h2 zinc finger protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ78_9STRA)

HSP 1 Score: 139 bits (349), Expect = 6.280e-32
Identity = 137/440 (31.14%), Postives = 184/440 (41.82%), Query Frame = 1
Query:   28 RILILGDGNFSFSLALAKALPPSSEIVATSFDGPVDLLGKYPESPGIVAALRSLG--VSVLHNVDAT--APDARVVEVEEAEASPG---------GGCG--CPGQQRQ-YEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVETGIVGEGGGGVVASGVADRHHCGAESILAPGGAVHVTLALDQPERWGLQEQAARHGFSLAH----RRRFPAEQ--IDGYMTKRHQTGRSFQQRVHDSETLSFVWASASGAKAGEGEPATAALGDSTNTLPPWLWTGVNTCGEPSLNADGHGGGLGGAAGDGTASAVVDGDRRSEAKADNRKRGXXXXXXXXXXXXXXXXXLAEVCELCGKRYKTSQALRTHTRQFHELGQEGGVPLAPREEEPCPHPSCGRVFTSTRALDQHVSAKHSGNNVDIKPDWFVGSI 1281
            R+L+LGDGN S+SL LA+ LP  ++++ATSFD P +L  KY ES   V  L +LG  V V++ VDA       R V++EE + +             C     G   + ++HVIFNHPHTG ED+ RHR+ L HF      SA  V A +                             G E     GG VHVTLA DQ +RW L + AAR GF L H     R+F  +   +D    KRHQ+G+SF+ R   S T SF     S           +A  ++  + PP           PSL    +                   D      A   + G                  +  C+ C K ++  + LR H    H+          P + E  P  +CGR F    AL QH  AKHSG   D+KPDW   ++
Sbjct:   15 RVLVLGDGNLSYSLGLAERLP-GAQLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFL----ESAKAVLACSTTQ--------------------------GTE-----GGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDHPPVD---IKRHQSGKSFRIRGLPSFTYSFTLEEVS---------YYSATANAAYSFPP----------SPSLWRHAY-------------------DPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDK--------PPVQAEGLPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAAL 369          
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Match: A0A4D9D783_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D783_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.510e-31
Identity = 140/442 (31.67%), Postives = 184/442 (41.63%), Query Frame = 1
Query:   28 RILILGDGNFSFSLALAKALPPSSEIVATSFDGPVDLLGKYPESPGIVAALRSLG--VSVLHNVDAT--APDARVVEVEEAEASPG---------GGCG--CPGQQRQ-YEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVETGIVGEGGGGVVASGVADRHHCGAESILAPGGAVHVTLALDQPERWGLQEQAARHGFSLAH----RRRFPAEQ--IDGYMTKRHQTGRSFQQRVHDSETLSFVWASASGAKAGEGEPATAALGDSTNTLPPW--LWTGVNTCGEPSLNADGHGGGLGGAAGDGTASAVVDGDRRSEAKADNRKRGXXXXXXXXXXXXXXXXXLAEVCELCGKRYKTSQALRTHTRQFHELGQEGGVPLAPREEEPCPHPSCGRVFTSTRALDQHVSAKHSGNNVDIKPDWFVGSI 1281
            R+L+LGDGN S+SL LA+ LP  ++++ATSFD P +L  KY ES   V  L +LG  V VL+ VDA       R V +EE + +             C     GQ  + ++HVIFNHPHTG ED+ RHR+ L HF      SA  V A +                             G E     GG VHVTLA DQ +RW L + AAR GF L H     R+F  +   +D    KRHQ+G+SF+ R   S T SF           EG    +A  ++  + PP   LW                                   D      A   + G                  +  C+ C K ++  + LR H    H+       P    E +PC   +CGR F    AL QH  AKHSG   D+KPDW   ++
Sbjct:   15 RVLVLGDGNLSYSLGLAERLP-GAQLLATSFDNPQELHKKYTESHATVTRLEALGARVRVLYGVDALNILETLRHVHMEEGKRAESFREPPHDSVSNCARTADGQPLEVFDHVIFNHPHTGWEDIHRHRALLAHFL----ESAKAVLACSTTQ--------------------------GTE-----GGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDPPPVD---IKRHQSGKSFRIRGLPSFTYSFTL---------EGVSYYSATLNAAYSFPPSRSLWRHAY-------------------------------DPEEHEAAMTIRPGDKGVAGGSKGAPITDVVKSIKCDTCEKNFRGPKDLRKHMGDAHDK------PPVQAEGQPCE--ACGRDFRDEAALGQHQRAKHSGMFQDLKPDWSTAAL 369          
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Match: A0A448ZMY1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMY1_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.620e-27
Identity = 145/604 (24.01%), Postives = 218/604 (36.09%), Query Frame = 1
Query:   34 LILGDGNFSFSLALAKALPPSSE-----IVATSFDGPVDLLGKYPESPGIVAALR-------SLGVSVLHNVDA--TAPDARVVEVEEAEASPGGGCGCPGQQRQYEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVETGIVGEGGGGVVASGVADRHHCGAESILAPGGAVHVTLALDQPERWGLQEQAARHGFSLAHRRRFPAEQIDG------------------YMTKRHQTGRSFQQRVHDSETLSFVWASASGAKAGEGEPATAALGDSTNTLPPWLWTGVNTCGEPSLNADGHGGGLGGAAGDGTASAVVDGDRRSEAKADNRKRGXXXXXXXXXXXXXXXXXLAEVCELCGKRYKTSQALRTHTRQFH-----------------ELGQEGGVPLAPREEEPCPHPSC---GRVFTSTRALDQHVSAKHSGNNVDIKPDWFVGSIYHLEPPPPVVPNSSDSVGAEVVHRSSTATAAAASDQPRLGLAANAEGRDPHAPSEAAVPEATGSASVVVSLETSSHTGAWQECDVCGYWFSSPADAQQHLDNLRPPIEGAVTRYDCGTCAKDFGSRRALLQHANFC 1689
            L LGDG+F++SL L + +  S++     ++ T  D    L+ KY +SP I+  ++       SL +S+ H V+A  T P  +    EEA+            Q   +HV+F+HPH GTE+   H+ FL H FH+  N  +K                                          GG  H+TL   Q  RW  QEQA RHG  L H+  F    +                    Y  +RHQTG+SF+ R  +S+++++ +    G    +G          T  LP   W  +N+  + ++                         ++SE K  N +                       C  C K +   ++L+ H R  H                 +LG      LA  E+   P  SC    R F ST+AL+ HV AKHS  N  I PDW +     +           D++ + ++   + ++              N EG D                              + EC +CG       +  QH ++  P  EG  T + C  C+K F   RA LQH NFC
Sbjct:   47 LTLGDGDFTYSLDLTRYMASSTKEQPVKLILTGIDTLETLISKYKDSPSILEEIKVQGEQVPSLELSIRHGVNAIVTNPKGK----EEAKMRT---------QDAADHVVFHHPHLGTENCAMHQRFLAHMFHSGTNYWMKEN----------------------------------------GGLFHLTLVEGQYLRWKCQEQAERHGLELLHQTTFAPPPVSDXTIAKAAKNKGXAFNNNRYHYRRHQTGKSFKTRRPNSKSITYTF----GRIVDKGTYV-------TTHLP---WQPLNSSSQDTVK------------------------KKSETKELNPQLSMLS------------------CPFCDKTFMEKRSLKCHLRDKHADMEHERSHLEPPIKKKKLGTGDTCTLATTEKRDIPXISCTHCSRTFQSTKALEDHVRAKHSAINTYIAPDWAIAKQKEI-----------DTLDSGLLKGKADSS--------------NEEGID----------------------------NKYDECHICGLKLVGK-NLSQHFEDFVPK-EGIET-FSCDFCSKPFREERAKLQHMNFC 485          
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Match: A0A5D6Y3S2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3S2_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.110e-26
Identity = 85/245 (34.69%), Postives = 113/245 (46.12%), Query Frame = 1
Query:   31 ILILGDGNFSFSLALAKALPPSSEIVATSFDGPVDLLGKYPESPGIVAALRSLGVSVLHNVDATAPDARVVEVEEAEASPGGGCGCPGQQR----QYEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVETGIVGEGGGGVVASGVADRHHCGAESILAPGGAVHVTLALDQPERWGLQEQAARHGFSLAHRRRFPAEQIDG-------YMTKRHQTGRSFQQRVHDSETL 732
            +L +GDGNFSFSLA A+  P  +++ A+SFD   +L  KYPE+P  V  LR+LG  VLH VDAT   A + + E AE     G   P        +++ V+FNHPH G E++RRHRS L HF+                                            A  +LAP G + +TLA  QP RW    +A R G  L  +     + +D        Y  KRHQ GRSF + +   E L
Sbjct:   16 VLTVGDGNFSFSLAFARRFP-RAQLAASSFDSAQELAAKYPEAPRHVHQLRALGARVLHRVDATQLRASLAQAETAEVGDEEGGPAPRPASPLPARFDVVVFNHPHCGEENVRRHRSLLSHFY------------------------------------------ASARELLAPRGEIRLTLAAGQPARWEALARARRAGLRLTQQ----VDDVDSDEAFGLAYERKRHQNGRSFHRVLLHGERL 213          
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Match: A0A6A3UCE6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UCE6_9STRA)

HSP 1 Score: 117 bits (294), Expect = 8.520e-25
Identity = 88/245 (35.92%), Postives = 120/245 (48.98%), Query Frame = 1
Query:   13 QPRACRILILGDGNFSFSLALAKALP------PSSEIVATSFDGPVDLLGKYPESPGIVAALRSLGVSVLHNVDATAPDARVVEVEEAEASPGGGCGCPGQQRQYEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVETGIVGEGGGGVVASGVADRHHCGAESILAPGGAVHVTLALDQPERWGLQEQAARHGFSLAHRRRFPAEQIDG-------YMTKRHQTGRSFQQ 708
            +PR  R+L +GDGNFS+SLALAK         P  E+ ATS+D   +L+ KYPES  I A L+ LG SVLH VDAT        + E+  + G          ++  V+FNHPH G E++RRH+S L HF+ A A   L+ E  +E     ++G++                               +TLA  QPERW   ++A   G  L HR+    + +DG       Y  KRHQ G+SF Q
Sbjct:   31 EPRRHRVLTVGDGNFSYSLALAKQRKSLGDDTPPLELTATSYDSYEELVAKYPESKRICAQLKELGASVLHRVDAT-------NIRESLVAAGA------TPDKFHAVVFNHPHCGEENVRRHQSLLSHFY-ASALEVLEQEEVSE-----DSGVL-------------------------------LTLAEGQPERWQAVQRALSAGLKL-HRQ---IDDVDGDDTFGVAYERKRHQNGKSFHQ 221          
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Match: A0A2P4YUA0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YUA0_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.470e-24
Identity = 88/239 (36.82%), Postives = 117/239 (48.95%), Query Frame = 1
Query:   13 QPRACRILILGDGNFSFSLALAK--ALPPSSEIVATSFDGPVDLLGKYPESPGIVAALRSLGVSVLHNVDATAPDARVVEVEEAEASPGGGCGCPGQQRQYEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVETGIVGEGGGGVVASGVADRHHCGAESILAPGGAVHVTLALDQPERWGLQEQAARHGFSLAHRRRFPAEQIDG-------YMTKRHQTGRSF 702
            + R+ RIL +GDGNFS+SLALAK     PS ++ ATS+D   +L+ KYPE   I A L+ LG SVLH VDAT     + E    E           Q ++++ V+FNHPH G E++RRH+S L HF+    +SAL+V    E D                                  G  + +TLA  QPERW   E+A   G  L HR+    + +D        Y  KRHQ G+SF
Sbjct:   36 KSRSRRILTVGDGNFSYSLALAKQHGNDPSLQLTATSYDSYDELVAKYPECKRICAQLKDLGASVLHRVDAT----NICESLGVE-----------QLKKFDSVVFNHPHCGEENVRRHQSLLSHFY----SSALEVLEDNEEDE---------------------------------GNGILLTLAEGQPERWQAVERALSAGLRL-HRQ---VDDVDNDEVFGLVYERKRHQNGKSF 218          
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Match: G5AE26_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AE26_PHYSP)

HSP 1 Score: 114 bits (286), Expect = 8.730e-24
Identity = 86/245 (35.10%), Postives = 116/245 (47.35%), Query Frame = 1
Query:   13 QPRACRILILGDGNFSFSLALAKALPPSSE------IVATSFDGPVDLLGKYPESPGIVAALRSLGVSVLHNVDATAPDARVVEVEEAEASPGGGCGCPGQQRQYEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVETGIVGEGGGGVVASGVADRHHCGAESILAPGGAVHVTLALDQPERWGLQEQAARHGFSLAHRRRFPAEQIDG-------YMTKRHQTGRSFQQ 708
             PR  R+L +GDGNFS+SLALAK      +      + ATS+D   +L+ KYPES  I A L+ LG SVLH VDAT        + E+  + G          ++  V+FNHPH G E++RRH+S L HF+ A A   L+     E +   E+GI+                               +TLA  QPERW   ++A   G  L HR+    + +D        Y  KRHQ G+SF Q
Sbjct:   32 DPRRRRVLTVGDGNFSYSLALAKQHKSKGDDTRPLQLTATSYDSYDELVAKYPESKRICAQLKELGASVLHRVDAT-------NIRESLVAAGA------TSDKFHSVVFNHPHCGEENVRRHQSLLSHFY-ASALEVLEKGEGDEVEQSEESGIL-------------------------------LTLAEGQPERWQAVQRALSAGLKL-HRQ---VDNVDSDAKFGLEYERKRHQNGKSFHQ 227          
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Match: A0A225VJE6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VJE6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 6.820e-23
Identity = 82/231 (35.50%), Postives = 117/231 (50.65%), Query Frame = 1
Query:   28 RILILGDGNFSFSLALAKALPPSSEIVATSFDGPVDLLGKYPESPGIVAALRSLGVSVLHNVDATAPDARVVEVEEAEASPGGGCGCPGQQRQYEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVETGIVGEGGGGVVASGVADRHHCGAESILAPGGAVHVTLALDQPERWGLQEQAARHGFSLAHRR--RFPAEQIDG--YMTKRHQTGRSFQQ 708
            R+L +GDGNFS+SLALAK    + ++ ATS+D   +L+ KYPES  I   L+ LG SVLH VDAT        + E+  +          +++++ V+FNHPH G E++RRH+S L HF+ A A   L+     E++     GI+                               +TLA  QPERW   E+A + G  L HR+      +++ G  Y  KRHQ G+SF Q
Sbjct:   40 RVLTVGDGNFSYSLALAKQTDTTLQLTATSYDSYDELVAKYPESKRICTQLKELGASVLHRVDAT-------NIRESLVA----------EQKFDSVVFNHPHCGEENVRRHQSLLSHFY-ASALDVLEENEENEWN-----GIL-------------------------------LTLAEGQPERWQAVERAQKAGLRL-HRQVDNVDNDEVFGFAYERKRHQNGKSFHQ 215          
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Match: D0NMF8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMF8_PHYIT)

HSP 1 Score: 111 bits (278), Expect = 1.010e-22
Identity = 85/242 (35.12%), Postives = 116/242 (47.93%), Query Frame = 1
Query:   19 RACRILILGDGNFSFSLALAKALPPSS-----EIVATSFDGPVDLLGKYPESPGIVAALRSLGVSVLHNVDATAPDARVVEVEEAEASPGGGCGCPGQQRQYEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVETGIVGEGGGGVVASGVADRHHCGAESILAPGGAVHVTLALDQPERWGLQEQAARHGFSLAHRRRFPAEQIDG-------YMTKRHQTGRSFQQ 708
            R C +L +GDGNFS+SLALAK           ++ ATS+D   +L+ KYPES  I   L+ LG SV+H VDAT        + E+  + G       +Q  ++ V+FNHPH G E++RRH+S L HF+     SAL++   +E D                                  G  + +TLA  QPERW   E+A + G  L HRR    + +D        Y  KRHQ G+SF Q
Sbjct:   34 RRC-VLTVGDGNFSYSLALAKQHKNQGNDTPVQLTATSYDSYNELVAKYPESKRICGQLKELGASVMHRVDAT-------NLRESLVAAGA------EQLTFDAVVFNHPHCGEENVRRHQSLLSHFY----TSALEILEDSEEDE---------------------------------GNGILLTLAEGQPERWQAVERALQAGLRL-HRR---VDDVDNDAVFGLKYERKRHQNGKSFHQ 220          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig556.13869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVZ6_ECTSI3.260e-20760.00C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=... [more]
W7TQ78_9STRA6.280e-3231.14C2h2 zinc finger protein n=1 Tax=Nannochloropsis g... [more]
A0A4D9D783_9STRA1.510e-3131.67Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A448ZMY1_9STRA3.620e-2724.01Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A5D6Y3S2_9STRA1.110e-2634.69Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6A3UCE6_9STRA8.520e-2535.92Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A2P4YUA0_9STRA2.470e-2436.82Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
G5AE26_PHYSP8.730e-2435.10Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A225VJE6_9STRA6.820e-2335.50Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
D0NMF8_PHYIT1.010e-2235.12Uncharacterized protein n=2 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig556contigL-elsbetiae_contig556:21834..23747 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score609.4
Seed ortholog evalue1.7e-171
Seed eggNOG ortholog2880.D7FVZ6
KEGG koko:K19307
Hectar predicted targeting categoryother localisation
EggNOG free text desc.rRNA (uridine-N3-)-methyltransferase activity
EggNOG OGsKOG4174@1,KOG4174@2759
EC2.1.1.313
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Ec32 ortholog descriptionC2H2 zinc finger protein
Ec32 orthologEc-01_002750.1
Exons2
Model size1704
Cds size1704
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816587.2103086-CDS-L-elsbetiae_contig556:21833..226391622816587.2103086-CDS-L-elsbetiae_contig556:21833..22639Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig556 21834..22639 +
1691683666.5032432-CDS-L-elsbetiae_contig556:21833..226391691683666.5032432-CDS-L-elsbetiae_contig556:21833..22639Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig556 21834..22639 +
1622816587.222296-CDS-L-elsbetiae_contig556:22849..237471622816587.222296-CDS-L-elsbetiae_contig556:22849..23747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig556 22850..23747 +
1691683666.5149198-CDS-L-elsbetiae_contig556:22849..237471691683666.5149198-CDS-L-elsbetiae_contig556:22849..23747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig556 22850..23747 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig556.13869.1prot_L-elsbetiae_contig556.13869.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig556 21834..23747 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig556.13869.1

>prot_L-elsbetiae_contig556.13869.1 ID=prot_L-elsbetiae_contig556.13869.1|Name=mRNA_L-elsbetiae_contig556.13869.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=568bp
GDGSQPRACRILILGDGNFSFSLALAKALPPSSEIVATSFDGPVDLLGKY
PESPGIVAALRSLGVSVLHNVDATAPDARVVEVEEAEASPGGGCGCPGQQ
RQYEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSALKVEAAAEFDTPVE
TGIVGEGGGGVVASGVADRHHCGAESILAPGGAVHVTLALDQPERWGLQE
QAARHGFSLAHRRRFPAEQIDGYMTKRHQTGRSFQQRVHDSETLSFVWAS
ASGAKAGEGEPATAALGDSTNTLPPWLWTGVNTCGEPSLNADGHGGGLGG
AAGDGTASAVVDGDRRSEAKADNRKRGGEGGGGGKTAAGGALLLLAEVCE
LCGKRYKTSQALRTHTRQFHELGQEGGVPLAPREEEPCPHPSCGRVFTST
RALDQHVSAKHSGNNVDIKPDWFVGSIYHLEPPPPVVPNSSDSVGAEVVH
RSSTATAAAASDQPRLGLAANAEGRDPHAPSEAAVPEATGSASVVVSLET
SSHTGAWQECDVCGYWFSSPADAQQHLDNLRPPIEGAVTRYDCGTCAKDF
GSRRALLQHANFCGGGGG
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mRNA from alignment at L-elsbetiae_contig556:21834..23747+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig556.13869.1 ID=mRNA_L-elsbetiae_contig556.13869.1|Name=mRNA_L-elsbetiae_contig556.13869.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1914bp|location=Sequence derived from alignment at L-elsbetiae_contig556:21834..23747+ (Laminarionema elsbetiae ELsaHSoW15)
GGGGACGGGTCCCAGCCCAGAGCTTGCCGGATCCTCATCCTTGGCGACGG TAACTTCTCTTTCTCTCTGGCCCTGGCGAAGGCGTTGCCGCCAAGCTCCG AAATCGTGGCGACCTCTTTCGACGGACCCGTTGATCTCCTCGGCAAGTAC CCGGAGTCCCCGGGGATCGTCGCGGCCCTGCGCTCTCTGGGAGTGTCCGT GCTCCACAACGTTGACGCAACGGCACCGGACGCCAGGGTCGTCGAAGTTG AAGAAGCAGAAGCCTCTCCTGGGGGCGGATGCGGGTGCCCTGGGCAGCAG CGGCAGTATGAGCACGTCATATTCAACCATCCTCACACCGGTACCGAAGA CATGCGCCGGCACCGCTCGTTCCTGGGGCACTTCTTTCACGCCGTGGCGA ACTCCGCGCTCAAGGTTGAAGCGGCCGCGGAATTCGACACACCCGTCGAA ACCGGCATCGTTGGTGAAGGTGGTGGAGGTGTCGTGGCCTCCGGCGTAGC AGATAGGCACCATTGCGGTGCCGAGTCCATCCTCGCTCCCGGCGGGGCCG TCCACGTCACCCTTGCCCTCGACCAGCCGGAGCGCTGGGGCCTTCAAGAG CAGGCCGCCCGGCACGGCTTCTCTCTGGCACACCGACGGCGGTTCCCGGC GGAACAGATCGACGGTTACATGACCAAGAGGCACCAGACCGGCCGCTCGT TCCAGCAACGAGTTCACGACAGCGAGACCCTGTCGTTCGTCTGGGCTTCG GCTTCGGGGGCAAAGGCGGGCGAGGGTGAACCGGCCACGGCAGCGCTTGG TGACAGGTGTAGTAGGAGCTGTCGCAGTGGTTCGTATGACCAGGAGACCT GTGCTGCCGGTGGTAGTGGAGTTGCAGCGGCGGCGGCCGTTCGGCAGCGT GGATCTGTCGACGACGGGATGGAGGAGGAGCAGAAGAGGCAGCCGACTAG TGGTGGTGGTGATAGGAGTGGCGTCAGGGTTGCACACGGCGGTGTCGCTG AGGCTTCCGCGAGCAGCACCAACACTTTGCCTCCATGGCTTTGGACCGGC GTGAACACGTGCGGGGAGCCGAGTTTGAACGCGGACGGCCACGGTGGCGG CCTTGGCGGCGCTGCTGGTGATGGAACAGCGTCAGCGGTAGTAGACGGCG ATCGACGCAGCGAGGCCAAGGCTGACAATCGAAAGAGGGGGGGCGAAGGC GGCGGCGGCGGCAAGACAGCGGCAGGCGGCGCCCTTCTTCTTCTGGCTGA GGTCTGCGAGCTGTGCGGCAAGAGGTACAAGACGTCGCAGGCGCTGCGGA CGCACACGCGGCAGTTTCACGAGCTGGGGCAGGAAGGAGGCGTGCCCCTG GCCCCCCGAGAGGAAGAGCCCTGCCCGCATCCGAGCTGCGGGCGCGTGTT CACGAGCACCAGGGCCCTCGACCAGCACGTGTCGGCCAAGCACAGCGGGA ACAACGTAGACATCAAGCCCGACTGGTTCGTGGGGAGCATCTATCACCTC GAGCCCCCGCCGCCGGTAGTGCCAAACAGCAGCGACAGCGTGGGAGCGGA GGTAGTACATAGGAGTTCCACCGCAACCGCGGCGGCGGCTTCGGACCAGC CACGATTAGGCTTGGCCGCGAACGCAGAAGGTAGAGATCCCCACGCGCCA AGCGAAGCGGCGGTGCCCGAGGCCACGGGGTCGGCTTCGGTGGTGGTCAG CCTTGAAACGAGTAGCCACACCGGCGCGTGGCAGGAGTGCGATGTTTGTG GGTATTGGTTCTCCTCCCCGGCGGATGCGCAACAACACCTCGACAACCTG CGGCCCCCGATCGAGGGCGCCGTGACCCGTTACGATTGCGGGACGTGCGC GAAGGACTTCGGCTCGAGGAGGGCGCTCCTCCAGCATGCCAACTTCTGCG GCGGCGGCGGTGGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig556:21834..23747+

>mRNA_L-elsbetiae_contig556.13869.1 ID=mRNA_L-elsbetiae_contig556.13869.1|Name=mRNA_L-elsbetiae_contig556.13869.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3408bp|location=Sequence derived from alignment at L-elsbetiae_contig556:21834..23747+ (Laminarionema elsbetiae ELsaHSoW15)
GGGGACGGGTCCCAGCCCAGAGCTTGCCGGATCCTCATCCTTGGCGACGG
TAACTTCTCTTTCTCTCTGGCCCTGGCGAAGGCGTTGCCGCCAAGCTCCG
AAATCGTGGCGACCTCTTTCGACGGACCCGTTGATCTCCTCGGCAAGTAC
CCGGAGTCCCCGGGGATCGTCGCGGCCCTGCGCTCTCTGGGAGTGTCCGT
GCTCCACAACGTTGACGCAACGGCACCGGACGCCAGGGTCGTCGAAGTTG
AAGAAGCAGAAGCCTCTCCTGGGGGCGGATGCGGGTGCCCTGGGCAGCAG
CGGCAGTATGAGCACGTCATATTCAACCATCCTCACACCGGTACCGAAGA
CATGCGCCGGCACCGCTCGTTCCTGGGGCACTTCTTTCACGCCGTGGCGA
ACTCCGCGCTCAAGGTTGAAGCGGCCGCGGAATTCGACACACCCGTCGAA
ACCGGCATCGTTGGTGAAGGTGGTGGAGGTGTCGTGGCCTCCGGCGTAGC
AGATAGGCACCATTGCGGTGCCGAGTCCATCCTCGCTCCCGGCGGGGCCG
TCCACGTCACCCTTGCCCTCGACCAGCCGGAGCGCTGGGGCCTTCAAGAG
CAGGCCGCCCGGCACGGCTTCTCTCTGGCACACCGACGGCGGTTCCCGGC
GGAACAGATCGACGGTTACATGACCAAGAGGCACCAGACCGGCCGCTCGT
TCCAGCAACGAGTTCACGACAGCGAGACCCTGTCGTTCGTCTGGGCTTCG
GCTTCGGGGGCAAAGGCGGGCGAGGGTGAACCGGCCACGGCAGCGCTTGG
TGACAGGGGGACGGGTCCCAGCCCAGAGCTTGCCGGATCCTCATCCTTGG
CGACGGTAACTTCTCTTTCTCTCTGGCCCTGGCGAAGGCGTTGCCGCCAA
GCTCCGAAATCGTGGCGACCTCTTTCGACGGACCCGTTGATCTCCTCGGC
AAGTACCCGGAGTCCCCGGGGATCGTCGCGGCCCTGCGCTCTCTGGGAGT
GTCCGTGCTCCACAACGTTGACGCAACGGCACCGGACGCCAGGGTCGTCG
AAGTTGAAGAAGCAGAAGCCTCTCCTGGGGGCGGATGCGGGTGCCCTGGG
CAGCAGCGGCAGTATGAGCACGTCATATTCAACCATCCTCACACCGGTAC
CGAAGACATGCGCCGGCACCGCTCGTTCCTGGGGCACTTCTTTCACGCCG
TGGCGAACTCCGCGCTCAAGGTTGAAGCGGCCGCGGAATTCGACACACCC
GTCGAAACCGGCATCGTTGGTGAAGGTGGTGGAGGTGTCGTGGCCTCCGG
CGTAGCAGATAGGCACCATTGCGGTGCCGAGTCCATCCTCGCTCCCGGCG
GGGCCGTCCACGTCACCCTTGCCCTCGACCAGCCGGAGCGCTGGGGCCTT
CAAGAGCAGGCCGCCCGGCACGGCTTCTCTCTGGCACACCGACGGCGGTT
CCCGGCGGAACAGATCGACGGTTACATGACCAAGAGGCACCAGACCGGCC
GCTCGTTCCAGCAACGAGTTCACGACAGCGAGACCCTGTCGTTCGTCTGG
GCTTCGGCTTCGGGGGCAAAGGCGGGCGAGGGTGAACCGGCCACGGCAGC
GCTTGGTGACAGCACCAACACTTTGCCTCCATGGCTTTGGACCGGCGTGA
ACACGTGCGGGGAGCCGAGTTTGAACGCGGACGGCCACGGTGGCGGCCTT
GGCGGCGCTGCTGGTGATGGAACAGCGTCAGCGGTAGTAGACGGCGATCG
ACGCAGCGAGGCCAAGGCTGACAATCGAAAGAGGGGGGGCGAAGGCGGCG
GCGGCGGCAAGACAGCGGCAGGCGGCGCCCTTCTTCTTCTGGCTGAGGTC
TGCGAGCTGTGCGGCAAGAGGTACAAGACGTCGCAGGCGCTGCGGACGCA
CACGCGGCAGTTTCACGAGCTGGGGCAGGAAGGAGGCGTGCCCCTGGCCC
CCCGAGAGGAAGAGCCCTGCCCGCATCCGAGCTGCGGGCGCGTGTTCACG
AGCACCAGGGCCCTCGACCAGCACGTGTCGGCCAAGCACAGCGGGAACAA
CGTAGACATCAAGCCCGACTGGTTCGTGGGGAGCATCTATCACCTCGAGC
CCCCGCCGCCGGTAGTGCCAAACAGCAGCGACAGCGTGGGAGCGGAGGTA
GTACATAGGAGTTCCACCGCAACCGCGGCGGCGGCTTCGGACCAGCCACG
ATTAGGCTTGGCCGCGAACGCAGAAGGTAGAGATCCCCACGCGCCAAGCG
AAGCGGCGGTGCCCGAGGCCACGGGGTCGGCTTCGGTGGTGGTCAGCCTT
GAAACGAGTAGCCACACCGGCGCGTGGCAGGAGTGCGATGTTTGTGGGTA
TTGGTTCTCCTCCCCGGCGGATGCGCAACAACACCTCGACAACCTGCGGC
CCCCGATCGAGGGCGCCGTGACCCGTTACGATTGCGGGACGTGCGCGAAG
GACTTCGGCTCGAGGAGGGCGCTCCTCCAGCATGCCAACTTCTGCGGCGG
CGGCGGTGGTCACCAACACTTTGCCTCCATGGCTTTGGACCGGCGTGAAC
ACGTGCGGGGAGCCGAGTTTGAACGCGGACGGCCACGGTGGCGGCCTTGG
CGGCGCTGCTGGTGATGGAACAGCGTCAGCGGTAGTAGACGGCGATCGAC
GCAGCGAGGCCAAGGCTGACAATCGAAAGAGGGGGGGCGAAGGCGGCGGC
GGCGGCAAGACAGCGGCAGGCGGCGCCCTTCTTCTTCTGGCTGAGGTCTG
CGAGCTGTGCGGCAAGAGGTACAAGACGTCGCAGGCGCTGCGGACGCACA
CGCGGCAGTTTCACGAGCTGGGGCAGGAAGGAGGCGTGCCCCTGGCCCCC
CGAGAGGAAGAGCCCTGCCCGCATCCGAGCTGCGGGCGCGTGTTCACGAG
CACCAGGGCCCTCGACCAGCACGTGTCGGCCAAGCACAGCGGGAACAACG
TAGACATCAAGCCCGACTGGTTCGTGGGGAGCATCTATCACCTCGAGCCC
CCGCCGCCGGTAGTGCCAAACAGCAGCGACAGCGTGGGAGCGGAGGTAGT
ACATAGGAGTTCCACCGCAACCGCGGCGGCGGCTTCGGACCAGCCACGAT
TAGGCTTGGCCGCGAACGCAGAAGGTAGAGATCCCCACGCGCCAAGCGAA
GCGGCGGTGCCCGAGGCCACGGGGTCGGCTTCGGTGGTGGTCAGCCTTGA
AACGAGTAGCCACACCGGCGCGTGGCAGGAGTGCGATGTTTGTGGGTATT
GGTTCTCCTCCCCGGCGGATGCGCAACAACACCTCGACAACCTGCGGCCC
CCGATCGAGGGCGCCGTGACCCGTTACGATTGCGGGACGTGCGCGAAGGA
CTTCGGCTCGAGGAGGGCGCTCCTCCAGCATGCCAACTTCTGCGGCGGCG
GCGGTGGT
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