mRNA_L-elsbetiae_contig554.13838.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig554.13838.1
Unique NamemRNA_L-elsbetiae_contig554.13838.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig554.13838.1 vs. uniprot
Match: D8LH26_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH26_ECTSI)

HSP 1 Score: 386 bits (991), Expect = 1.020e-127
Identity = 252/345 (73.04%), Postives = 284/345 (82.32%), Query Frame = 1 
Query:    1 MRSLEDSCFLKIVEAPE-SLNPARVQRALFSKKARQLVRRSAEMVAXXXXXXRRGMDTVSLRQKIITKLVNEGGGMAGSFPAPPAFLDDSFTSVSLANSKVGDSFIQGTLSMRCPMLRSVNLTACFYIRDASIKALLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGFSELDISGILVTTHTLEVVCRHCRRLEVLRMGFIEYMEATLTSTLPPLVANLRSLHVHWNSCVTDEFLSWAIQSLPRLEDLNLCGCSKVTIDGVSDMLYERQDALEALENGENAGEAPQQVHAIEKVNVRYTSLSKQDIEALQSAFQG 1032
            MRSLEDSCF+KI ++PE SLNP RV+RALFSK A +LVRRS E+ A      +  MDTV LRQKIITKLV EG GMAGSFPAPPAFLD SFTSVSL NSK+GDSFI+ TLSMRCPMLRSV+LTACFYIRD++I++LLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                N+  F+ELDISG+ VTTHTLEV+C  CR LEVLR+GFIEYME TL  TLPPL+ NLRSLHVHWN+C+TDEFLSWA Q++PRL+DLNLCGCSKV++DGVSDM++ERQ   EALE   NAG     + AIEKVNVRYTSLSK DIEALQ+A+QG
Sbjct:    1 MRSLEDSCFVKIAQSPEVSLNPQRVERALFSKNATELVRRSTEIGAAGGNG-KGAMDTVRLRQKIITKLVEEGRGMAGSFPAPPAFLDKSFTSVSLVNSKIGDSFIRDTLSMRCPMLRSVDLTACFYIRDSAIESLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNITAPGVDALCGLHPNAPRFAELDISGLNVTTHTLEVICHRCRHLEVLRIGFIEYMEDTLKDTLPPLLPNLRSLHVHWNTCITDEFLSWASQAIPRLQDLNLCGCSKVSVDGVSDMIHERQ---EALEKDGNAG----LISAIEKVNVRYTSLSKHDIEALQAAYQG 337
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig554.13838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH26_ECTSI1.020e-12773.04Leucine rich repeat protein n=2 Tax=Ectocarpus Tax... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig554contigL-elsbetiae_contig554:24706..31408 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.0
Seed ortholog evalue6e-106
Seed eggNOG ortholog2880.D8LH26
Preferred nameFBXL22
KEGG koko:K10288
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016567,GO:0016740,GO:0019005,GO:0019538,GO:0019787,GO:0019941,GO:0030016,GO:0030017,GO:0030018,GO:0030163,GO:0031461,GO:0031674,GO:0032446,GO:0032991,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043292,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044444,GO:0044449,GO:0044464,GO:0051603,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0099080,GO:0099081,GO:0099512,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1990234
EggNOG free text desc.F-box LRR-repeat protein
EggNOG OGsKOG1947@1,KOG1947@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Ec32 ortholog descriptionLeucine rich repeat protein
Ec32 orthologEc-06_010970.1
Exons8
Model size1650
Cds size1047
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816584.2871807-UTR-L-elsbetiae_contig554:24705..253081622816584.2871807-UTR-L-elsbetiae_contig554:24705..25308Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig554 24706..25308 -
1691683664.463308-UTR-L-elsbetiae_contig554:24705..253081691683664.463308-UTR-L-elsbetiae_contig554:24705..25308Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig554 24706..25308 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816584.305254-CDS-L-elsbetiae_contig554:25308..254191622816584.305254-CDS-L-elsbetiae_contig554:25308..25419Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 25309..25419 -
1691683664.4789317-CDS-L-elsbetiae_contig554:25308..254191691683664.4789317-CDS-L-elsbetiae_contig554:25308..25419Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 25309..25419 -
1622816584.3158295-CDS-L-elsbetiae_contig554:26171..262821622816584.3158295-CDS-L-elsbetiae_contig554:26171..26282Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 26172..26282 -
1691683664.4924543-CDS-L-elsbetiae_contig554:26171..262821691683664.4924543-CDS-L-elsbetiae_contig554:26171..26282Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 26172..26282 -
1622816584.326581-CDS-L-elsbetiae_contig554:26836..269791622816584.326581-CDS-L-elsbetiae_contig554:26836..26979Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 26837..26979 -
1691683664.5079265-CDS-L-elsbetiae_contig554:26836..269791691683664.5079265-CDS-L-elsbetiae_contig554:26836..26979Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 26837..26979 -
1622816584.3384688-CDS-L-elsbetiae_contig554:27958..280531622816584.3384688-CDS-L-elsbetiae_contig554:27958..28053Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 27959..28053 -
1691683664.5180864-CDS-L-elsbetiae_contig554:27958..280531691683664.5180864-CDS-L-elsbetiae_contig554:27958..28053Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 27959..28053 -
1622816584.3493764-CDS-L-elsbetiae_contig554:28811..290471622816584.3493764-CDS-L-elsbetiae_contig554:28811..29047Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 28812..29047 -
1691683664.5270438-CDS-L-elsbetiae_contig554:28811..290471691683664.5270438-CDS-L-elsbetiae_contig554:28811..29047Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 28812..29047 -
1622816584.359877-CDS-L-elsbetiae_contig554:29421..295471622816584.359877-CDS-L-elsbetiae_contig554:29421..29547Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 29422..29547 -
1691683664.5359685-CDS-L-elsbetiae_contig554:29421..295471691683664.5359685-CDS-L-elsbetiae_contig554:29421..29547Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 29422..29547 -
1622816584.3705916-CDS-L-elsbetiae_contig554:30394..305501622816584.3705916-CDS-L-elsbetiae_contig554:30394..30550Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 30395..30550 -
1691683664.5460362-CDS-L-elsbetiae_contig554:30394..305501691683664.5460362-CDS-L-elsbetiae_contig554:30394..30550Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 30395..30550 -
1622816584.382193-CDS-L-elsbetiae_contig554:31339..314081622816584.382193-CDS-L-elsbetiae_contig554:31339..31408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 31340..31408 -
1691683664.5574582-CDS-L-elsbetiae_contig554:31339..314081691683664.5574582-CDS-L-elsbetiae_contig554:31339..31408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig554 31340..31408 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig554.13838.1prot_L-elsbetiae_contig554.13838.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig554 25309..31408 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig554.13838.1

>prot_L-elsbetiae_contig554.13838.1 ID=prot_L-elsbetiae_contig554.13838.1|Name=mRNA_L-elsbetiae_contig554.13838.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=349bp
MRSLEDSCFLKIVEAPESLNPARVQRALFSKKARQLVRRSAEMVAAGGGG
GRRGMDTVSLRQKIITKLVNEGGGMAGSFPAPPAFLDDSFTSVSLANSKV
GDSFIQGTLSMRCPMLRSVNLTACFYIRDASIKALLSRCPLVERLYLRNC
RKLTDLSLEHIVRAGPNMTALDIGGCFNINAAAVENLCTVHPNSAGFSEL
DISGILVTTHTLEVVCRHCRRLEVLRMGFIEYMEATLTSTLPPLVANLRS
LHVHWNSCVTDEFLSWAIQSLPRLEDLNLCGCSKVTIDGVSDMLYERQDA
LEALENGENAGEAPQQVHAIEKVNVRYTSLSKQDIEALQSAFQGIAFL*
back to top

mRNA from alignment at L-elsbetiae_contig554:24706..31408-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig554.13838.1 ID=mRNA_L-elsbetiae_contig554.13838.1|Name=mRNA_L-elsbetiae_contig554.13838.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6703bp|location=Sequence derived from alignment at L-elsbetiae_contig554:24706..31408- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGTCGTTGGAAGACAGCTGCTTCTTGAAAATCGTTGAAGCACCCGA
GTCGCTCAATCCTGCGAGGGTGAGGTTACTCCAAAAGTCTCCTGCCGCCG
GGAAAACTCTTGTGTTCTTCCGTCTCCACTCTCCATATGCAGCGAATGTA
CTTTACAGCTGCTGTAGCTCCGCTGCTCATCTGCTCGTCTTTGAACTTTG
CAACAAAAAGTGAATGCTATAGGCCTACGTAGAGAACGTTGCGTCCACAT
TCTGGCTGTTTGAAAAGTATCCCCCCAATAAGAGGCAGCGGTCCCGAGGT
GTATCTAGGCCTCGACCTCAGCAACCCTAGTCTAGACATATTATTAGGGT
TTCATCTCCGAGGGCGCTCGCCCCCTCCTCTTGTCCATCCTTTAATTAAG
TGGTGTGGTTTATATCGAGCTCTACGGACTCGACTAAAGGAAATTCCAGA
CACACACCCGAGGTCCCTGGTCGACCCACGTCTACTACCTGTTTGCGGTA
ATCCCCTCTGAGTTCCCTACAGGTACGGGGGGGGAACGAGCTTCGTTTGC
CGGTTTTCTCTGCAATGAAAAGAGTTATAGTACCAAGAGGTGCGCCATTG
GAAAGACCTCGTCGAGATCTTTTCAAAATGTAATACAACTTCCGCTTGGT
GCCGTCTCGGTTGTGGAGATATTCGGCAAGGACCCCCCCCCCCCCTCCCC
AGGGGGAGGGGATTCGGTAGGCACTTCTTACGTAGACTTTGTTGTAAAGA
TGTTTGTACTGCCTGGCCGACAGCGTACATAGAATACCGAACGCTTGAGC
TCATCATTGGTTGTTTTCCTGGCTGATCGGAGCCACTCCTCTGTTACTAT
TGCACCAGGTGCAGCGGGCTCTTTTCTCAAAAAAAGCCAGACAGCTAGTC
AGACGGTCCGCCGAGATGGTGGCCGCGGGGGGCGGGGGTGGCAGGAGGGG
CATGGACACCGTGAGCCTGAGGCAGAAGATCATCACGAAGCTCGTCAACG
AAGGGGGAGGGATGGTAAGATCTTCGCCCGTGTGCCTTGCTTCTTTGCGC
TCACGTCTCGTCCATGCCTTGGGCGTTTGCGGGCACCTCCCACAGCACAC
CAAAGCTGCTTCAAGCAGTCAATAATAACCTACACATACACGCACGTTTT
CTGTTCGGTAAACATATGGGATACAGATATAGGAACCGGGAGAGAGGGTC
GGGATTTTTGGGTTTACGGTCAGGGTTACGGAATCCCTATCCCTATACAA
AATGTATGAACTTTTTCTTCGTGAAGGCAGTCCTCTCAGCAAGTACGTAC
GTAAGTTTAGACGCGCGTATTGTACGTAAACCGTGGCAATAAATTACGAT
GTGAGGGAAGGGATAAGAGTGTTTGGCCGCTTCATGGGAAGCGGGGGGCG
GGGGGGTGGTTGGCCTCGCATGCCTCCAGGCAGGAAGATTGAGTGTGCCT
TGCTGCTGGCTGCTGCTGCCTTGAGTTGAAGGGACTGCGTATTGTAAAAC
ACTTGAAAGAAACAATACAATTTGACCACTGGGACATGGGCATCGATCTC
GGCAACAACACCTGCCCAGGCAGGCACGCGCTCCCTGTGCATGATTGATT
AATGCACCATAATTGCTCGCTGTTTTGCTGTGTATCGCGTTCTGTTTGCC
CCTAAGTACCCCCATCCGCTAGATACGTGTCTGGCCGCCGACAAGCGAGC
TACGCATTGGTGCGTTTGGCTGCATGCACCGCTGCGCGCCTCGCGAATCA
CCCATCCATACGCCCCCCCCCCCCAATGTCGTCGATCGGTTTGTGCCTCT
TGTTTATATTTTATTCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCAGGCCGGGAGTTTTCCCGCGCCGCCGGCGTTCCTCGACGAC
TCCTTCACGTCCGTGTCCTTGGCCAACTCCAAGGTCGGGGATTCCTTCAT
CCAGGGCACGCTGAGCATGCGGTGTCCGATGCTGCGGGTGAGGTTTGCGG
GCGTCCCTGCGTTTCCGGGAGAATCAAGCTTGCTTGCATGTATATATCTA
CGTAAAGTGCACGAAAAGAGAGCTTGTAACGGGGAAAATCTGCGGCGTGC
GATGGGACTCTTTTCTGGGTGTTGTGTTCTCCTGCGTCTTGCGCTTTGTT
CGGGAAGGGACACGACCGACGCTGGGTCTCCATGCCCGTGCCCCCCGAGA
GCAGGCGTCCCGTGGATCATGCAGAACATCCTTCTTTCTCAGGATGTGAT
GTATGCTACACACGCATCTTTGTGCGCTTTCCCACTGCCCTGAACACCCA
ATCTCTCCCGCCTCCCGTTCCCTCGCGGCGACTTGACGAATGAATACCTT
GTCGTGGCCAGAGCGTTAACCTCACGGCATGTTTCTACATCCGAGACGCG
TCCATCAAAGCGCTGCTGAGCCGGTGTCCTCTGGTAGAGCGGCTCTACCT
CAGGAATTGCCGGAAGCTGACAGACTTGAGCCTGGAGCACATCGTGAGAG
CGGGGCCCAACATGACGGCGCTCGATATCGGCGGCTGCTTCAACATCAAC
GCTGCGGCGGTGGAGAACCTTTGCACGGTTCACCCCAACTCGGCCGGGTA
AGGCGCAAGGGCAGGAACCATCGGCGTGTTAAGGTTTTGATACTGCGGGC
TTTTTCTGTCGGTTTGTGGTCGAGATGGTTGCTTGTTTTTTGGCTGCAAC
AGGGACTCCCGGTTCTTCTTGGAACGGGGGTTTATGCACGTTGCGGCTGT
CTGTGGGGCAAAGTCGATTAGGGGGTGCGTCTTGTGGCTGCTATGCCATG
CTACGCTATGCTACGCTATGCTATGCTAGGTGTCATTAAGAATGCATGTG
ATTCTCGAACGGCCACGCTTCAGAGTGTTCTGGCATGTCATGTTCAAGCC
ACTCTTGATGCGCGCTCACTTTCTGGCTAGTTGAACCTCACTAGGAGCGC
TGTGCCAGAACGGTTCGATCCGTAGAAAGAACATTTTCGGCCGCCCCCAA
ATGCACCCGCAGCAGTAGCAGTATTGCGGACTTTGTCCATGCGCGCGCTC
TACCGACGCGTGCGCAGATGGACCGGAAATGCGTACCCACGCTGTTCACG
TAAAACTTGCACAATATATCCTCCAAAGGTGCGCAGATATTATAGGTGGT
GGTGATGGTGGTGGTGGTGGTGTTTGTGCCGAGAACGCGACAATTTTCCC
ACGCAAAGTTGCAGGTCGTTTTGTGTGTCACGATAGATTCGTAGCATCTC
TTCATCGTTGCAGCAATCAGTTCGTATTTTGCCGCCTGCTGTGCATTCAT
ACCCTTGCACCTCCGTTACCTCCGACCTTCAAAAATGCCGAAATGACAAA
ATCAGCTTTTCGGAGCTGGACATCTCTGGGATCCTGGTGACAACGCACAC
CTTGGAGGTGGTCTGTAGGCACTGCCGGCGACTCGAGGTGCTGCGAATGG
GTGAGCAAACTAATGGTCGATCCGCGGAACCCCCGAAGGGTGCCAATGCG
AGAGAGGGGCGGTGCTACCTGTAGACCCGGGGACACAAGCGTGTTTTCGC
CGCGGCACAGCGCCCATCCTTTCTCTTGGAGTATGTTTTCCCCTGGGTAT
ACGTGCCCAATGTCTCCCGCTCGCATGCTGTTGGTCATGAGGCGACACGC
ACAAACACCAAACAGACGAGGCCGCTCATGGCTTCGGAGGGGTATGAGCC
TCCAGAGACTCTTGACTAACTGCTGTGCCGTGCGTGGACGTGCGCGTCGA
CATACGACTCGGTCGTTGCGCAGGTTGTCGTACCACCGTCCGCGCTGCGC
ATGGTAGCAACTTATCTTCCCGTGTTCCTGACCCGCCTTGAGTGTTACTG
CGACCACAACACCATCAACCTTATAATTTCGTCCACTGCTTACTTCATTT
GTAGGCCTAGGCCTACCAAAGGCCAAAGCTTTGCCTGAATGCCGTATCAC
CTCGAAGCCGTCGCTCGTTGGTTGGGCCCTGGGCCGTCCAGGGGCGGGAC
TTTTTTTAAAGTGCTCGGAAAACCGTCATCAACAACCCTCATAAAAATAG
ACCCGTCCTCGAGGTGGTGTCTTTCGCCGCTTGTTATCGTGCCACCCTTT
GACTTTTTGCGCAGCTTTGCTTGCTTCGAGCCACACCTGCCGTATGTGCC
GTCTTTACATCACGCCGCGCCCGACGTAGTATACATTCACCGCGTGACAT
TTACCACGGCCTGTACTTGTTGGTCGTCCTCCGTGCGGCACGCGACTGAG
AAACAGGCTGATATACCCAACGCACCGCAATTTCGACCCTCCTACACAGG
TCTCCCTGACCCCCCTAACTGCGCCCCCTTCGCGTGTGTTTTGTTGCCCT
CCCGGCGGCCGAACCTTACCCCCTCACACACGGGTGTGTCTTCTTTTTTT
TTTCCTCTCGCGGCGACGATGCGACGAAGGCTTCATCGAGTACATGGAGG
CCACCTTGACGAGCACCCTTCCACCCCTCGTGGCAAACCTGCGCTCGCTC
CACGTGCACTGGAACTCGTGCGTCACCGACGAGTTCCTCTCGTGGGCCAT
TCAGTCGTTACCGCGGCTAGAGGTGCGGTTCGGTGTGGTGCGGTGCGAAC
GGCTGCAGCCCGGCCCGTTTTTTGTGGTTCCACCCGTGGGGCGTTTGGGG
AAAAGGAGACGGGACTTGAGGTGTTTGTGCCGAATGGGCTGGTCCTTTGT
GCGTCTTGCCGGTGTCGTCTCAGTGTTACGCTAATAGAGGGGGCTCGTGA
TGCGAGGGGCATAGTGATCGAGTTTTGGTTCGGATTTGTTTGCTTTCAAT
GTCGGGACCTCATCGCCGAGCCGCTGCGCGCTTTTCTTTCTCTGCAGTGT
TTTGAGTTTTGGCTTCAGTGTTAGAGCCCAGGACAGACAGGCAGGGTTTC
CAAAATGGCTGAAGATATGTGTTTCCCGCTGCATGCTGAGAGGCGTGCCT
GTCACGGTTTTGTTTTTGTACGCCACAGACGTCTGGATAAACACCGATCC
CAACCCTGTCGATGCTGCGTTGAAGTCACACGCTGTTTGATGGGAAAGAC
GCGCACGCCGTGATTGATCCAGAGCCAACACTGGACGTCTTTCCGCCTGC
TGCCCATTCTCTGATCGACCTCGCAGGACCTTAATTTGTGCGGCTGCTCG
AAAGTGACGATAGACGGGGTGTCGGACATGCTATACGAAAGACAGGACGC
CCTGGAAGCCCTGGAGAACGGCGAGAATGCTGGCGAGGTGAGCGTGAATG
TAGGCCTTCGCGGTGGTGGCACGACGGAAATTAACTGCGAAAAAACAGCC
GTCCCCCGACGAGGAATCGCCCATTGTCAATCTATCTCGGCAGCACTCCT
TGCCTCAAGGTTCCACCAGCGTTTTGTGTTGTGGGAAAGGGCGAGGAGGG
ATGGTTTTTGATGGCGACATTCTTCATGCATATTGTAGACACGCATCGCG
CATGTAGGCACGTTTGGAGTGTGTCTGGGAGGGGGTCCATAGGTGTGCTC
GGCCGGTAACCTTTGCCTACCCGCGGGTGGTACTGGTCTGGATTCGTGAA
CGTTCGTCTCAGGTGCGCGGGCAGACGAGAGTCTACAAAATACGTTATCT
CTTCTTCCGTGTGATTTCAGGGGAAATATGAGGCGGTTGGCAGTATGCTT
TCGGAAGGGATACAGATTTCATGATCGATGTGGGCGTGTTAAGCATCGCA
GATGGTTGCGCCCGTTTTATGCCGTCTCCGCTTTGTAGCGCATGTGTGTG
TTCCTCCTGCAACATCGCTGTGATTGATCTAGCAAGGATTACATAGCCTC
CATGCAGTACGTAGCGTTTGGGAACGAGTTCGTTTTCGTGCTTGGCCCAG
CAGGGGAAGTCAGACGCGGCGGTCAGGCACAGTGCCGGACGCGCTTCGCG
TGCGCTGAGCTTGTTAAGGGTCCGCCATCTGAGCCCCCCCCCCGCGCTCG
CTTGCCTCCTTTGCCGGGCGTTTTCCGTATGACCGGCAGGCACCGCAACA
GGTACACGCGATCGAGAAGGTCAACGTGAGGTACACTTCGCTCAGCAAGC
AGGACATCGAGGCGCTACAGTCGGCGTTCCAGGGGATCGCGTTTTTGTAG
GCGGTATAGCTTGCGTTTCCGCTACTATACATAGTGAGCCCGTGACCACG
GGAATTGACCGCATCAAGTGTTTCGAATTAGTACGGACATTGAGAGGTAC
TGGATCGAGAGATCGGAACGGTTTTCAATGTGACAACATACACATACATA
CATACATACATGTTTGTAGCCAGCCTTTGAAGCAAGCAGTCTTTAAAATA
AAACAAAGAATCAAAGATGGAACCTAACCCATACTAGAGCAAAGACTCGA
TATGGGGTTCAAACGGTATTCCATACAGAGACGTAATATTTGGCGAAGCG
AGCAGAAAAAACAAACCTAAATATCAGAAGAATTCAACATCTCCCCTGCA
AAGATTTGAAGTCTTCGTAGGTTTCGGTCAGAGGAGACATGTATGGCACA
TCGCAAGGCGTTCAGAGATATCGGCCGGTGATGCAGCGCCTCGTGCTTTG
CAGAGGGTTCCTTAATCCTTGGTTGGTGATGTTGAGTAAGGGTTGTGGAT
TCGGATGCTGCGGGAGGGAATGCGGCAAAAGTTTAAGAAGAAAGGGGCTG
TTATGTATGTAGATATCATAAGTAGACTGGGCCGGCGTACTTGCCAAGTG
AGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig554:24706..31408-

>mRNA_L-elsbetiae_contig554.13838.1 ID=mRNA_L-elsbetiae_contig554.13838.1|Name=mRNA_L-elsbetiae_contig554.13838.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2094bp|location=Sequence derived from alignment at L-elsbetiae_contig554:24706..31408- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGTCGTTGGAAGACAGCTGCTTCTTGAAAATCGTTGAAGCACCCGA
GTCGCTCAATCCTGCGAGGATGAGGTCGTTGGAAGACAGCTGCTTCTTGA
AAATCGTTGAAGCACCCGAGTCGCTCAATCCTGCGAGGGTGCAGCGGGCT
CTTTTCTCAAAAAAAGCCAGACAGCTAGTCAGACGGTCCGCCGAGATGGT
GGCCGCGGGGGGCGGGGGTGGCAGGAGGGGCATGGACACCGTGAGCCTGA
GGCAGAAGATCATCACGAAGCTCGTCAACGAAGGGGGAGGGATGGTGCAG
CGGGCTCTTTTCTCAAAAAAAGCCAGACAGCTAGTCAGACGGTCCGCCGA
GATGGTGGCCGCGGGGGGCGGGGGTGGCAGGAGGGGCATGGACACCGTGA
GCCTGAGGCAGAAGATCATCACGAAGCTCGTCAACGAAGGGGGAGGGATG
GCCGGGAGTTTTCCCGCGCCGCCGGCGTTCCTCGACGACTCCTTCACGTC
CGTGTCCTTGGCCAACTCCAAGGTCGGGGATTCCTTCATCCAGGGCACGC
TGAGCATGCGGTGTCCGATGCTGCGGGCCGGGAGTTTTCCCGCGCCGCCG
GCGTTCCTCGACGACTCCTTCACGTCCGTGTCCTTGGCCAACTCCAAGGT
CGGGGATTCCTTCATCCAGGGCACGCTGAGCATGCGGTGTCCGATGCTGC
GGAGCGTTAACCTCACGGCATGTTTCTACATCCGAGACGCGTCCATCAAA
GCGCTGCTGAGCCGGTGTCCTCTGGTAGAGCGGCTCTACCTCAGGAATTG
CCGGAAGCTGACAGACTTGAGCCTGGAGCACATCGTGAGAGCGGGGCCCA
ACATGACGGCGCTCGATATCGGCGGCTGCTTCAACATCAACGCTGCGGCG
GTGGAGAACCTTTGCACGGTTCACCCCAACTCGGCCGGAGCGTTAACCTC
ACGGCATGTTTCTACATCCGAGACGCGTCCATCAAAGCGCTGCTGAGCCG
GTGTCCTCTGGTAGAGCGGCTCTACCTCAGGAATTGCCGGAAGCTGACAG
ACTTGAGCCTGGAGCACATCGTGAGAGCGGGGCCCAACATGACGGCGCTC
GATATCGGCGGCTGCTTCAACATCAACGCTGCGGCGGTGGAGAACCTTTG
CACGGTTCACCCCAACTCGGCCGGCTTTTCGGAGCTGGACATCTCTGGGA
TCCTGGTGACAACGCACACCTTGGAGGTGGTCTGTAGGCACTGCCGGCGA
CTCGAGGTGCTGCGAATGGCTTTTCGGAGCTGGACATCTCTGGGATCCTG
GTGACAACGCACACCTTGGAGGTGGTCTGTAGGCACTGCCGGCGACTCGA
GGTGCTGCGAATGGGCTTCATCGAGTACATGGAGGCCACCTTGACGAGCA
CCCTTCCACCCCTCGTGGCAAACCTGCGCTCGCTCCACGTGCACTGGAAC
TCGTGCGTCACCGACGAGTTCCTCTCGTGGGCCATTCAGTCGTTACCGCG
GCTAGAGGCTTCATCGAGTACATGGAGGCCACCTTGACGAGCACCCTTCC
ACCCCTCGTGGCAAACCTGCGCTCGCTCCACGTGCACTGGAACTCGTGCG
TCACCGACGAGTTCCTCTCGTGGGCCATTCAGTCGTTACCGCGGCTAGAG
GACCTTAATTTGTGCGGCTGCTCGAAAGTGACGATAGACGGGGTGTCGGA
CATGCTATACGAAAGACAGGACGCCCTGGAAGCCCTGGAGAACGGCGAGA
ATGCTGGCGAGGACCTTAATTTGTGCGGCTGCTCGAAAGTGACGATAGAC
GGGGTGTCGGACATGCTATACGAAAGACAGGACGCCCTGGAAGCCCTGGA
GAACGGCGAGAATGCTGGCGAGGCACCGCAACAGGTACACGCGATCGAGA
AGGTCAACGTGAGGTACACTTCGCTCAGCAAGCAGGACATCGAGGCGCTA
CAGTCGGCGTTCCAGGGGATCGCGTTTTTGTAGGCACCGCAACAGGTACA
CGCGATCGAGAAGGTCAACGTGAGGTACACTTCGCTCAGCAAGCAGGACA
TCGAGGCGCTACAGTCGGCGTTCCAGGGGATCGCGTTTTTGTAG
back to top