mRNA_L-elsbetiae_contig5536.13828.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Match: D8LKK8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKK8_ECTSI) HSP 1 Score: 260 bits (664), Expect = 1.790e-86 Identity = 135/162 (83.33%), Postives = 145/162 (89.51%), Query Frame = 1 Query: 1 QVPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVKSFDPVAEAFKAYDPSDTGFMDTEILRSIFSNLGFGQLSDEDLTVLVEAADGDGDGKVSLGDFRGMCDSVGKREEAAEETSNQEE 486 QVPKNAKGGILVCEEELKAAFDFFDV+ KGVITA LRK+LGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEV +FDPVAEAFKAYDPS+TGFMDTEILRSIF NLGFG++SDEDL +LVEAADGDGDG+V + DFR MC SVGK+E A NQ E Sbjct: 8 QVPKNAKGGILVCEEELKAAFDFFDVEGKGVITAGALRKKLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVTNFDPVAEAFKAYDPSETGFMDTEILRSIFDNLGFGKMSDEDLAILVEAADGDGDGRVGVSDFREMCGSVGKQEAMATNADNQAE 169
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Match: F0YPY1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPY1_AURAN) HSP 1 Score: 202 bits (514), Expect = 3.950e-64 Identity = 98/142 (69.01%), Postives = 121/142 (85.21%), Query Frame = 1 Query: 4 VPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVKSFDPVAEAFKAYDPSDTGFMDTEILRSIFSNLGFGQLSDEDLTVLVEAADGDGDGKVSLGDFRGM 429 VP+N+KGG+LV EEELKAAFDFFDVD G IT NLRKRLG F++++ A+E R LMNNK+EMT++DL+E+LLENEVK+FDPVAEAFK YDP TGF+D+ +LRSIF NLGFG+++D+DLT+L E D DGDGK+SL DFR M Sbjct: 1 VPRNSKGGVLVTEEELKAAFDFFDVDSSGKITLGNLRKRLGVFYKNMPAKEYRFLMNNKSEMTLEDLKELLLENEVKNFDPVAEAFKVYDPDGTGFVDSNVLRSIFENLGFGEITDDDLTILTETGDVDGDGKISLMDFRKM 142
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Match: A0A835ZDH5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH5_9STRA) HSP 1 Score: 197 bits (501), Expect = 2.150e-61 Identity = 93/145 (64.14%), Postives = 127/145 (87.59%), Query Frame = 1 Query: 1 QVPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVKSFDPVAEAFKAYDPSDTGFMDTEILRSIFSNLGFGQLSDEDLTVLVEAADGDGDGKVSLGDFRGMCD 435 +VPKN+KGG+LV +EEL+A F+FFDVD +GVIT++ +RKR+GAF+++++ RE + LMNNK+EMT++DLRE+L++NEV FDPVAEAFKAYDP TG++D E+LR+IFSNLGFG ++++DL +LVEAAD DGDG++SL DFR M D Sbjct: 29 EVPKNSKGGVLVTDEELRAVFEFFDVDGRGVITSTCIRKRMGAFYKNMNPREYKFLMNNKSEMTLNDLRELLVDNEVTDFDPVAEAFKAYDPDGTGYVDVEVLRTIFSNLGFGDINNDDLAILVEAADVDGDGQISLNDFRRMTD 173
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Match: A0A7S2S2D3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2D3_9STRA) HSP 1 Score: 191 bits (485), Expect = 6.970e-59 Identity = 93/142 (65.49%), Postives = 118/142 (83.10%), Query Frame = 1 Query: 4 VPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVKSFDPVAEAFKAYDPSDTGFMDTEILRSIFSNLGFGQLSDEDLTVLVEAADGDGDGKVSLGDFRGM 429 VPKNA GG+LV E+EL+AAFDFFD+D G ITASNL+KRL F++ + A+E R LMNNKA M++DDL+++LL+NEV +FDPVAEAFK YDP TGF+DTE+LR++F +LGFG++SDEDL VLV+ D D DGK+SL DFR M Sbjct: 19 VPKNASGGVLVTEQELEAAFDFFDLDGTGTITASNLKKRLEVFYKDMPAKEYRFLMNNKAAMSLDDLKDLLLDNEVTNFDPVAEAFKVYDPQGTGFVDTEVLRTMFQDLGFGEVSDEDLQVLVQTGDADHDGKISLSDFRNM 160
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Match: A0A7S2C3J7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3J7_9STRA) HSP 1 Score: 187 bits (474), Expect = 6.630e-57 Identity = 94/160 (58.75%), Postives = 125/160 (78.12%), Query Frame = 1 Query: 4 VPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVKSFDPVAEAFKAYDPSDTGFMDTEILRSIFSNLGFGQLSDEDLTVLVEAADGDGDGKVSLGDFRGMCDSVGKREEAAEETSNQE 483 VPKN KGG+LV ++EL AAF+FFD+D G IT +NLRKRLG F++++ A++ R LMNNK E+T+ DLRE+LL+NEV +FDPVAEAFK YDP TGF+D ++LR +F NLGFG+++DEDL +LVE D D DGK+SL DFR M D + + AA+E ++ E Sbjct: 27 VPKNEKGGVLVTDDELAAAFEFFDMDGSGKITMTNLRKRLGVFYKNMPAKDYRFLMNNKPELTLQDLRELLLDNEVTNFDPVAEAFKVYDPEGTGFVDHKVLRDMFQNLGFGEVTDEDLQILVETGDVDQDGKISLSDFRNMLD-FNRAQVAAQEAADLE 185
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Match: A0A8J2SJG6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJG6_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.240e-56 Identity = 87/144 (60.42%), Postives = 119/144 (82.64%), Query Frame = 1 Query: 4 VPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVKSFDPVAEAFKAYDPSDTGFMDTEILRSIFSNLGFGQLSDEDLTVLVEAADGDGDGKVSLGDFRGMCD 435 VP+N++GG+LV +EELK+AFDFFDV+ G IT + L+KRLG F++ + +E + LMN+++E+T+DDLRE+LL+NEVK+FDPVAEAFK YDP TGF+DT +L++IF NLGFG++S++DL VL E D DGDG++SL DFR M D Sbjct: 16 VPRNSRGGVLVTDEELKSAFDFFDVEGSGKITQAQLKKRLGVFYKDMPNKEYKFLMNDQSELTLDDLRELLLDNEVKNFDPVAEAFKVYDPEGTGFVDTSVLKAIFENLGFGEISEDDLAVLTETGDVDGDGRISLMDFRKMLD 159
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Match: A0A6V1U3T1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U3T1_HETAK) HSP 1 Score: 176 bits (446), Expect = 1.050e-52 Identity = 87/155 (56.13%), Postives = 117/155 (75.48%), Query Frame = 1 Query: 4 VPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVKSFDPVAEAFKAYDPSDTGFMDTEILRSIFSNLGFGQLSDEDLTVLVEAADGDGDGKVSLGDFRGMCDSVGKREEAAEE 468 + +N+KGG+LV E E+KAAFDFFD+D +G IT NLRKRLG F++++ +E + LMNNK EMT++DL ++L++NEVK FDPVAEAFKAYDP G +D E+LR IF LGFG ++DEDL +L E AD + DG+++L DFR M D + + AEE Sbjct: 27 IRRNSKGGVLVTEAEIKAAFDFFDIDNEGKITLQNLRKRLGVFYKNMPTKEYKFLMNNKNEMTLEDLTDLLMDNEVKDFDPVAEAFKAYDPDSNGVIDPEMLRHIFQGLGFGDITDEDLEILTETADVNKDGRITLEDFRDMIDEDLRIQREAEE 181
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Match: A0A485KGH9_9STRA (Aste57867_5213 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGH9_9STRA) HSP 1 Score: 165 bits (418), Expect = 3.740e-49 Identity = 78/142 (54.93%), Postives = 111/142 (78.17%), Query Frame = 1 Query: 4 VPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVKSFDPVAEAFKAYDPSDTGFMDTEILRSIFSNLGFGQLSDEDLTVLVEAADGDGDGKVSLGDFRGM 429 V +NAKGG+LV +E+++AAFDFFDVD KG +T NL+ RLG F++ ++ R+ R+L+NN++E+T L ++LLEN++ +DP+AEAF+AYDP TGF+ ++L +F NLG+G+LSDEDL VLV AD D DGK++L DFR M Sbjct: 27 VLRNAKGGVLVTKEQIRAAFDFFDVDHKGSVTMENLKSRLGVFYKDMTTRDYRILLNNESELTEQALCDLLLENDIADYDPIAEAFRAYDPEGTGFVSFDVLSRLFENLGYGKLSDEDLRVLVATADADKDGKLNLDDFRHM 168
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Match: L1J855_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J855_GUITC) HSP 1 Score: 164 bits (416), Expect = 1.160e-48 Identity = 85/158 (53.80%), Postives = 118/158 (74.68%), Query Frame = 1 Query: 4 VPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVKSFDPVAEAFKAYDPSDTGFMDTEILRSIFSNLGFGQLSDEDLTVLVEAADGDGDGKVSLGDFRGMCDSVGKREEAAEETSN 477 VP+N GG+ V EEELKAAFDFFDV KGV+T ++L++RL F+++L ARE + L++ + + T + L+++L+ NE+K FDPV EAFK YDP +TG++D E+LRSIF NLGFG++++ED+ VL+E AD DGDGK+SL DFR M + K E E N Sbjct: 21 VPRNELGGVYVDEEELKAAFDFFDVHKKGVLTPADLKQRLSVFYKNLPAREYKFLIS-EPDFTFNTLKKLLVNNELKDFDPVKEAFKVYDPHETGYVDIEVLRSIFINLGFGEVTNEDVAVLIETADVDGDGKISLADFRKMVTNSKKVEADLESLHN 177
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Match: W4FTS4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTS4_9STRA) HSP 1 Score: 160 bits (404), Expect = 4.660e-47 Identity = 75/141 (53.19%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 1 QVPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAREARVLMNNKAEMTMDDLREVLLENEVKSFDPVAEAFKAYDPSDTGFMDTEILRSIFSNLGFGQLSDEDLTVLVEAADGDGDGKVSLGDFR 423 QV +N GG+LV +++++AAFDFFDV+ GV+T NL+ RLG F++ +S R+ RVL+NN++E+T L ++LLEN++ +DPVAEAF+AYDP TGF++ E+L +F +LG+G+LSD+DL VLV AD D DG+++L DFR Sbjct: 25 QVLRNENGGVLVTKDQIRAAFDFFDVEHNGVVTMDNLKSRLGVFYKDMSTRDYRVLLNNESELTEQTLCDLLLENDIADYDPVAEAFRAYDPEGTGFVNLEVLSRLFESLGYGKLSDDDLRVLVATADSDKDGQLNLADFR 165 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5536.13828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5536.13828.1 >prot_L-elsbetiae_contig5536.13828.1 ID=prot_L-elsbetiae_contig5536.13828.1|Name=mRNA_L-elsbetiae_contig5536.13828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp QVPKNAKGGILVCEEELKAAFDFFDVDMKGVITASNLRKRLGAFHRSLSAback to top mRNA from alignment at L-elsbetiae_contig5536:5779..6913+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5536.13828.1 ID=mRNA_L-elsbetiae_contig5536.13828.1|Name=mRNA_L-elsbetiae_contig5536.13828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1135bp|location=Sequence derived from alignment at L-elsbetiae_contig5536:5779..6913+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5536:5779..6913+ >mRNA_L-elsbetiae_contig5536.13828.1 ID=mRNA_L-elsbetiae_contig5536.13828.1|Name=mRNA_L-elsbetiae_contig5536.13828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1026bp|location=Sequence derived from alignment at L-elsbetiae_contig5536:5779..6913+ (Laminarionema elsbetiae ELsaHSoW15)back to top |