mRNA_L-elsbetiae_contig5531.13823.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Match: D8LG48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG48_ECTSI) HSP 1 Score: 291 bits (744), Expect = 5.050e-96 Identity = 147/196 (75.00%), Postives = 170/196 (86.73%), Query Frame = 1 Query: 1 VLTVFFFIFACVVSSNANAGFNVILTAIIYVAYVGLLAAIFNKKRSVDQGLDASMAIEPMAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTDDVAGYSCYSAWGMAAVAWFASFLLIAEGLTLAALISWKEDIFFVDGGYDNFDAQEDRGAYNSSAYAYDGATFGTGGIGGG-------GVEEDGRGIPQEADL 567 VLT+ FFI ACVVSSNANAG NV+LTA++YVAYVGLLA +FN+KR+ D G+D +MAIEP+ GG LIG+TTMMCFLSLMTAVYWG+MSGC+ DTDDV GYSCY+++GMAAVAWFASFLLI+E +TLAALI WKED+FFVDGGYDNFDAQEDRGAY+SSAYAYDGATFGTGG+GGG D G+PQ+ADL Sbjct: 28 VLTICFFICACVVSSNANAGLNVVLTAMMYVAYVGLLAVVFNRKRATDGGMDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISEAVTLAALILWKEDMFFVDGGYDNFDAQEDRGAYSSSAYAYDGATFGTGGMGGGLXXXXXXXXNGDDDGVPQQADL 223
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Match: A0A835YPK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK3_9STRA) HSP 1 Score: 127 bits (319), Expect = 5.950e-32 Identity = 74/164 (45.12%), Postives = 99/164 (60.37%), Query Frame = 1 Query: 16 FFIFACVVSSNANAGFNVILTAIIYVAYVGLLAAIFNKKRSVDQGLDASMA----------------IEP------MAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTDDVAGYSCYSAWGMAAVAWFASFLLIAEGLTLAALISWKEDIFFVDG--GYDNF 435 FF+ ACVV+ NANAGFN++LTA++Y+A+ A + + + GL A +A +EP MAGGV IG T+ + LSL TAVYWG MSGC + VAGYSCY+A GM A + FA+ LL+ E L AAL++WK+ +F DG GY+ F Sbjct: 27 FFVCACVVARNANAGFNIVLTALLYIAHALYTAYVVGR----ESGLHALLANLGSGXXXXXXXAHGLVEPSSTSRLMAGGVAIGTTSALTLLSLTTAVYWGRMSGCTAGVSGVAGYSCYAAGGMRAASAFAALLLVCEALLAAALVAWKDALFAADGLDGYEGF 186
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Match: A0A7S2V692_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V692_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.280e-17 Identity = 49/135 (36.30%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 1 VLTVFFFIFACVVSSNANAGFNVILTAIIYVAY-VGLLAAIFNKKRSVDQGLDASMAIEPMAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTDDVAGYSCYSAWGMAAVAWFASFLLIAEGLTLAALISWKED 402 VLT + I + VV+S ANAGFN +LT ++Y Y VG + K ++ G LIG + ++ LSL TA+YWG+++ C++ ++ ++ YSC + G AV FAS L I +G AL++WK++ Sbjct: 22 VLTACYLICSFVVASTANAGFNAVLTGLVYAVYCVGAYQVLHKSKTALSVGF-------------LIGFSALLIVLSLETAIYWGQLANCETVSESISQYSCSNKSGYRAVCAFASLLFILQGAMTTALVAWKDE 143
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Match: A0A7S1TNM9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNM9_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.450e-16 Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 34 VVSSNANAGFNVILTAIIYVAYVGLLAAIFNKKRSVDQGLDASMAIEPMAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTDDVAGYSCYSAWGMAAVAWFASFLLIAEGLTLAALISWKEDIFFVDGGYDNFDAQED-----RGAYNSSAYA-YDGATF 498 VV++ ANAGFN +LTAI+ +V + N+ +S +A G +IG++TMM FL LMTAV+WG++SGC+ DD YSC + A + L + + L+ W++D GYD+ GA +++AYA YD +T+ Sbjct: 33 VVAATANAGFNAVLTAILSCTFVVGAYRVLNRSQST------------LAVGFVIGVSTMMSFLMLMTAVFWGQLSGCEDVKDDPDQYSCDNKKAYGATCAMSVLLFLLDVSFTILLVLWRDDFMSESSGYDDIGGNSAFVNNAPGAADANAYAAYDSSTY 181
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Match: W7TS32_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS32_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 6.300e-16 Identity = 51/157 (32.48%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 34 VVSSNANAGFNVILTAIIYVAYVGLLAAIFNKKRSVDQGLDASMAIEPMAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTDDVAGYSCYSAWGMAAVAWFASFLLIAEGLTLAALISWKEDIFFVDGGYDNFDAQEDRGAYNSSAYAYDGATFGT 504 VV+S AN GFN +LTA++Y+ YV + + + P+A G ++G++ M+ FLSLMTA++WG+++ C D+ YSC + +A FA+ L + + + +AL+ W+++ YD D GA +SSA G GT Sbjct: 33 VVASTANMGFNAVLTALLYIFYVAGTYHVLQRSKM------------PLAVGFVLGVSVMITFLSLMTAIFWGQLANCSPGYYDIKRYSCTNRSAYSATCAFATLLFLVQLVFTSALVLWRDEFIQDSSAYD--DIHGAGGASSSSAAGLPGYEGGT 175
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Match: A0A7R9U994_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U994_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 5.460e-14 Identity = 49/161 (30.43%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 28 ACVVSSNANAGFNVILTAIIYVAYVGLLAAIFNKKRSVDQGLDASMAIEPMAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTDDVAGYSCYSAWGMAAVAWFASFLLIAEGLTLAALISWKEDIFFVDGGYDNFDAQ----EDRGAYNSSAYAYDGATF 498 ACVV+ ANAGFN +LTA+ +V + + +S +A G +IG+ TMM L MTA++WG++SGC+ +DV Y+C + A F+ L + + L+ W++D Y++ + + GA +S AYD +T+ Sbjct: 58 ACVVAPTANAGFNAVLTALCSCLFVVGAYRVLYRSQST------------LAVGFVIGVATMMSLLMFMTAIFWGQLSGCEKVDEDVDQYTCDNKKAYGATCAFSVLLFLLDTAFTILLVLWRDDFMGETAAYEDIGSSPFVNDQPGAEGNSYAAYDSSTY 206
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Match: A0A7S2S6Q8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Q8_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.470e-10 Identity = 41/129 (31.78%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 16 FFIFACVVSSNANAGFNVILTAIIYVAYVGLLAAIFNKKRSVDQGLDASMAIEPMAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTDDVAGYSCYSAWGMAAVAWFASFLLIAEGLTLAALISWKED 402 FFI ACV + AN GFNV+ T+ + +V + + + + L + + G L+G++ +LSL TA++WG+++ C ++ YSC + AV FA+ L I +G A L WK+D Sbjct: 37 FFICACVAAKTANMGFNVVFTSFCFGFHVAVGILV------IHRSLHTQLWV-----GFLLGLSGATAWLSLQTAIFWGQLADCDRHAHHLSQYSCSNVSAYKAVCAFAALLFILQGGLFAVLAVWKDD 154
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Match: D7FPE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPE0_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 6.300e-10 Identity = 54/152 (35.53%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 1 VLTVFFFIFACVVSSNANAGFNVILTAIIYVAYVGLLAAIFNKKRSVDQGLDASMAIEPMAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTD-DVAGYSCYSAWGMAAVAWFASFLLIAEGLTLAALIS-----WKEDIFFVDGGYDNFD 438 V T FFI A VV+S NAGF+V+LT ++ + + A++ KR D S+ G LIG+T ++ ++LMTA+YWG+++GC SD D D YSC + M VA FAS + + + + L+ +ED G Y ++D Sbjct: 39 VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWE--VGAMWLLKRGPH---DTSL-------GFLIGVTLVLNVITLMTAIYWGQLAGCDSDYDGDYDQYSCSNKSAMRGVAAFASIIWVLQLPFIYLLVQRRGVLTREDYATSGGRYADYD 178
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Match: A0A7R9YCB5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCB5_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.990e-9 Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 178 MAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTDDVAGYSCYSAWGMAAVAWFASFLLIAEGLTLAALISWKEDIFFVDGGYDNFDAQ----EDRGAYNSSAYAYDGATF 498 +A G +IG+ TMM L MTA++WG++SGC+ +DV Y+C + A F+ L + + L+ W++D Y++ + + GA +S AYD +T+ Sbjct: 23 LAVGFVIGVATMMSLLMFMTAIFWGQLSGCEKVDEDVDQYTCDNKKAYGATCAFSVLLFLLDTAFTILLVLWRDDFMGETAAYEDIGSSPFVNDQPGAEGNSYAAYDSSTY 133
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Match: A0A482SCT2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCT2_9ARCH) HSP 1 Score: 58.9 bits (141), Expect = 8.530e-7 Identity = 39/135 (28.89%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 1 VLTVFFFIFACVVSSNANAGFNVILTAIIYVAYVGLLAAIFNKKRSVDQGLDASMAIEPMAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTDDVAGYSCYSAWGMAAVAWFASFLLIAEGLTLAALISWKEDI 405 V V + I A ++SN AGFN +L II +A +GL + + + V + L G+++G + M+ F++L +A++WG+ S C ++ + CY+ M + F+ FL + +AA+I +K D+ Sbjct: 27 VFVVCYLISALFIASNTYAGFNSLLLGIIIIAVIGL--SYYGLFKEVTRTLF----------GIVLGCSVMLIFMTLQSAIFWGQYSDCTPNSLLNSVTQCYNPAAMKSCCTFSVFLFLTYIAQVAAMIRYKNDV 149 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5531.13823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5531.13823.1 >prot_L-elsbetiae_contig5531.13823.1 ID=prot_L-elsbetiae_contig5531.13823.1|Name=mRNA_L-elsbetiae_contig5531.13823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp MAIEPMAGGVLIGMTTMMCFLSLMTAVYWGEMSGCQSDTDDVAGYSCYSAback to top mRNA from alignment at L-elsbetiae_contig5531:3112..6524+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5531.13823.1 ID=mRNA_L-elsbetiae_contig5531.13823.1|Name=mRNA_L-elsbetiae_contig5531.13823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3413bp|location=Sequence derived from alignment at L-elsbetiae_contig5531:3112..6524+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5531:3112..6524+ >mRNA_L-elsbetiae_contig5531.13823.1 ID=mRNA_L-elsbetiae_contig5531.13823.1|Name=mRNA_L-elsbetiae_contig5531.13823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=816bp|location=Sequence derived from alignment at L-elsbetiae_contig5531:3112..6524+ (Laminarionema elsbetiae ELsaHSoW15)back to top |