mRNA_L-elsbetiae_contig553.13818.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Match: D7FX12_ECTSI (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX12_ECTSI) HSP 1 Score: 251 bits (641), Expect = 8.230e-84 Identity = 126/146 (86.30%), Postives = 130/146 (89.04%), Query Frame = 1 Query: 4 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHVLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDSGFFKVLGKGKLPAVPIIVRAKTFSKLAEHKIRAAGGACLLSA 441 PSRFSKNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGQHHHRILFDKF HVLRNREHCPIVNLDKLWSMLPEGTMEQAKA GGKAPVIDVTD+G+FKVLGKGKLPAVPIIVRAK FSKLAE KI+AAGGACLLSA Sbjct: 2 PSRFSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHHRILFDKFXXXXXXXXXXXXXHVLRNREHCPIVNLDKLWSMLPEGTMEQAKAGGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVRAKIFSKLAEQKIKAAGGACLLSA 147
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Match: A0A7S2WUG5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUG5_9STRA) HSP 1 Score: 244 bits (624), Expect = 3.440e-81 Identity = 118/148 (79.73%), Postives = 135/148 (91.22%), Query Frame = 1 Query: 4 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHVLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGG--KAPVIDVTDSGFFKVLGKGKLPAVPIIVRAKTFSKLAEHKIRAAGGACLLSA 441 P+RFSK RK RG VS+GHGRVGKHRKHPGGRGNAGGQHHHRILFDK+HPGYFGKVGMRRFH+LRNREHCPI+NLDKLWS+ PEGT +QAKAA G +AP+IDVT SG+FKVLG+G LP VP+IV+AK F+KLAE KI+AAGGACL++A Sbjct: 2 PTRFSKTRKLRGEVSSGHGRVGKHRKHPGGRGNAGGQHHHRILFDKYHPGYFGKVGMRRFHLLRNREHCPILNLDKLWSLAPEGTFDQAKAAAGTGQAPLIDVTKSGYFKVLGRGDLPDVPVIVKAKFFTKLAEKKIKAAGGACLITA 149
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Match: A0A6G0XSZ1_9STRA (Ribosomal_L18e/L15P domain-containing protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A6G0XSZ1_9STRA) HSP 1 Score: 230 bits (586), Expect = 2.050e-75 Identity = 110/147 (74.83%), Postives = 130/147 (88.44%), Query Frame = 1 Query: 4 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHVLRNREHCPIVNLDKLWSMLPEGTMEQA-KAAGGKAPVIDVTDSGFFKVLGKGKLPAVPIIVRAKTFSKLAEHKIRAAGGACLLSA 441 P+ KNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMR+FH+LRNR HCP VN++KLWS++ E + A KA GKAP+IDVT SG+FKVLGKG+LP++P+IV+AK FS+ AE+KI+A GGACLL+A Sbjct: 2 PTATHKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRQFHLLRNRYHCPTVNVEKLWSLVSEEVKDAAEKAKDGKAPIIDVTKSGYFKVLGKGRLPSIPVIVKAKYFSQEAENKIKAVGGACLLTA 148
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Match: A0A7S4ML89_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4ML89_9STRA) HSP 1 Score: 220 bits (561), Expect = 2.560e-71 Identity = 105/144 (72.92%), Postives = 124/144 (86.11%), Query Frame = 1 Query: 4 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHVLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDSGFFKVLGKGKLPAVPIIVRAKTFSKLAEHKIRAAGGACLL 435 P+R KNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGQHHHRILFDK+HPGYFGKVGMR+FHVLRNR+HCP +N+D L+++ EG E AK GGKAPV+D+ G+FK+LG G++ VP+IV+AK FSKLAE KI+ AGGACLL Sbjct: 24 PTRDHKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHHRILFDKYHPGYFGKVGMRQFHVLRNRKHCPTLNIDHLFNVAGEGVYEAAKNGGGKAPVVDLVSKGYFKLLGSGEI-TVPVIVKAKYFSKLAEKKIKEAGGACLL 166
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Match: A0A803LEZ0_CHEQI (Ribosomal_L18e/L15P domain-containing protein n=4 Tax=Pentapetalae TaxID=1437201 RepID=A0A803LEZ0_CHEQI) HSP 1 Score: 218 bits (555), Expect = 1.050e-70 Identity = 110/146 (75.34%), Postives = 122/146 (83.56%), Query Frame = 1 Query: 7 SRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHVLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDSGFFKVLGKGKLP-AVPIIVRAKTFSKLAEHKIRAAGGACLLSA 441 +R KNRKKRGHVSAGHGR+GKHRKHPGGRGNAGG HHHRILFDK+HPGYFGKVGMR FH LRNR HCPIVN+DKLWSMLPE E+A GKAPVIDVT G+FKVLGKG LP + PI+V+AK SK+AE KI+ GGA LL+A Sbjct: 3 TRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNRFHCPIVNIDKLWSMLPEDVKEKASKE-GKAPVIDVTQFGYFKVLGKGVLPDSKPIVVKAKLISKIAEKKIKENGGAVLLTA 147
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Match: A0A7S0FLV7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FLV7_9STRA) HSP 1 Score: 214 bits (544), Expect = 4.810e-69 Identity = 102/145 (70.34%), Postives = 121/145 (83.45%), Query Frame = 1 Query: 4 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHVLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDSGFFKVLGKGKLPAVPIIVRAKTFSKLAEHKIRAAGGACLLS 438 P+R K RKKRGHVS GHGR+GKHRKHPGGRGNAGGQHHHRIL DK+HPGYFGKVGMR+FHVLRNR HCP +N+DK+++ EG + AK GGKAPVID+ G+FK+LG G++ VP+IV+AK FSKLAE KI+ AGGAC+LS Sbjct: 2 PTRLHKARKKRGHVSMGHGRIGKHRKHPGGRGNAGGQHHHRILMDKYHPGYFGKVGMRQFHVLRNRTHCPTINIDKIFNAAGEGVYDAAKNGGGKAPVIDLVSLGYFKLLGNGQID-VPVIVKAKFFSKLAEKKIKEAGGACILS 145
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Match: A0A061SIX4_9CHLO (Large subunit ribosomal protein L27Ae n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SIX4_9CHLO) HSP 1 Score: 213 bits (543), Expect = 7.060e-69 Identity = 101/141 (71.63%), Postives = 120/141 (85.11%), Query Frame = 1 Query: 19 KNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHVLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDSGFFKVLGKGKLPAVPIIVRAKTFSKLAEHKIRAAGGACLLSA 441 KNRKKRGHVSAGHGR+GKHRKHP GRGNAGGQHHHRILFDK+HPGYFGKVGMR FH+ +N+ HCPI+N+DKLW+++ E +A +APVIDVT SG+FKVLGKG+LP P++V+AK FSKLAE KI+ AGGAC+L A Sbjct: 7 KNRKKRGHVSAGHGRIGKHRKHPSGRGNAGGQHHHRILFDKWHPGYFGKVGMRYFHLSKNKYHCPIINIDKLWTLVGEEKRLEAAKNTSQAPVIDVTQSGYFKVLGKGRLPKQPVVVKAKFFSKLAEAKIKEAGGACMLVA 147
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Match: A0A7S1U1J2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1J2_9STRA) HSP 1 Score: 213 bits (542), Expect = 1.000e-68 Identity = 103/146 (70.55%), Postives = 118/146 (80.82%), Query Frame = 1 Query: 4 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHVLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDSGFFKVLGKGKLPAVPIIVRAKTFSKLAEHKIRAAGGACLLSA 441 P+R KNRKKRGHVSAGHGR+GKHR HPGGRGNAGGQHHHRILFDK+ MR+FH ++NRE CP VN+DK+W MLPEGT+E K AGGKAPV+D+ G FKVLGKG+LP PIIV+AK FSK AE KI+AAGGACLL+A Sbjct: 2 PTRLHKNRKKRGHVSAGHGRIGKHRSHPGGRGNAGGQHHHRILFDKYXXXXXXXXXMRQFHKMKNREFCPTVNVDKIWGMLPEGTLEATKTAGGKAPVLDLVKLGVFKVLGKGRLPEAPIIVKAKYFSKEAEKKIKAAGGACLLTA 147
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Match: A0A7S2SEU0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SEU0_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.420e-68 Identity = 106/147 (72.11%), Postives = 125/147 (85.03%), Query Frame = 1 Query: 4 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHVLRNREHCPIVNLDKLWSMLPEGTMEQAK-AAGGKAPVIDVTDSGFFKVLGKGKLPAVPIIVRAKTFSKLAEHKIRAAGGACLLSA 441 P+R SKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHR L DK+HPGYFGKVGMR+FH+++NR CP VNLDKL+++ EG E AK A GKAPV+D+ + G+FK+LG G++ VP+IV+AK FSKLAE KIRAAGGACL +A Sbjct: 2 PTRLSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRTLMDKYHPGYFGKVGMRQFHLMQNRGFCPTVNLDKLFNVAGEGVYEAAKNAEAGKAPVVDLVNLGYFKLLGNGQIN-VPVIVKAKYFSKLAEQKIRAAGGACLCTA 147
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Match: A0A7S1TZC0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZC0_9STRA) HSP 1 Score: 215 bits (547), Expect = 1.610e-68 Identity = 104/147 (70.75%), Postives = 119/147 (80.95%), Query Frame = 1 Query: 1 QPSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHVLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDSGFFKVLGKGKLPAVPIIVRAKTFSKLAEHKIRAAGGACLLSA 441 QP+R KNRKKRGHVSAGHGR+GKHR HPGGRGNAGGQHHHRILFDK+ MR+FH ++NRE CP VN+DK+W MLPEGT+E K AGGKAPV+D+ G FKVLGKG+LP PIIV+AK FSK AE KI+AAGGACLL+A Sbjct: 69 QPTRLHKNRKKRGHVSAGHGRIGKHRSHPGGRGNAGGQHHHRILFDKYXXXXXXXXXMRQFHKMKNREFCPTVNVDKIWGMLPEGTLEATKTAGGKAPVLDLVKLGVFKVLGKGRLPEAPIIVKAKYFSKEAEKKIKAAGGACLLTA 215 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig553.13818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig553.13818.1 >prot_L-elsbetiae_contig553.13818.1 ID=prot_L-elsbetiae_contig553.13818.1|Name=mRNA_L-elsbetiae_contig553.13818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=148bp QPSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPback to top mRNA from alignment at L-elsbetiae_contig553:5485..8905- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig553.13818.1 ID=mRNA_L-elsbetiae_contig553.13818.1|Name=mRNA_L-elsbetiae_contig553.13818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3421bp|location=Sequence derived from alignment at L-elsbetiae_contig553:5485..8905- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig553:5485..8905- >mRNA_L-elsbetiae_contig553.13818.1 ID=mRNA_L-elsbetiae_contig553.13818.1|Name=mRNA_L-elsbetiae_contig553.13818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=888bp|location=Sequence derived from alignment at L-elsbetiae_contig553:5485..8905- (Laminarionema elsbetiae ELsaHSoW15)back to top |