mRNA_L-elsbetiae_contig5527.13815.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Match: A0A6H5L5S3_9PHAE (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5S3_9PHAE) HSP 1 Score: 506 bits (1303), Expect = 2.130e-159 Identity = 404/921 (43.87%), Postives = 464/921 (50.38%), Query Frame = 1 Query: 610 EEEEAAARDVTEALFPRGWLRRLPPCEEEDAEGGEGSAAAAVKESWLLLTRALEAGAAADSRPCTGRGEGDAAAAAA--------------IDPGEFPLLLSRRVHELVVLGLAANLMEVEVESPLVEYCESLVTQAAGVQQRALQILEPALAAMEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALDGHDDAGXGSDAECSPADRSGGTXXXXXXXXXEAGLPVASPPKGAETTVRKDNAPDENGVSRCDRSRERLAWHCVQAARAAASLVPPLTAHALLPAAALRLPHSCAPAVRVPAGDRRSYNARGGG-------GGAAGQPLTVAMVALRDIPSGGPLSCSWVDAQEPFSARMSRLREYSRVAVAAPXXXXXXXTTPMAMTAAETEA-----------------------VGGSRG---------PRGSEGVEEGCGGCGCPKCAVESRVGGSGRWGGDGSRSEDLGVEPLLAAARQAVDEDRFDDAFDTLRWAARAAPESAEVLYRAGVCAINQGRWSRALRLWRDGLALSPGHRQLRQEAEKYRALAFWLDRRDGDGAGATERESADDAAPPFSXXXXXXXXXXAVKRDSGETNPDPLDLPGEEEEGELAAXXXXXXXXXXXXXXXXXXXXXXXXXARQSAENLEIEFMAGDGEWVCRTRVPPLSASECAAVISEAEKKXXXXXXXXXXS---------SGWGTARHYAVPTTDVAVRELPRTLAWFNAAMRTRIGPIIAAAASLGDGAFAQQRKRRRRPRRPWRGLPPEPGAQHG-------HGVCAAPFTTPKVAGA---------------SDGDSDGXXXXXXXXXXXXXXXXXXXARLFLRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNGASEYEGGGTWFEGLGRAVRPEEAGHVVAFP 3120 E E AA R++TEA FPRGW+ + P ++ESW LL ALE S+ +G E A AA IDPG FPLLL RR HE VV GLAANL+EVEVESP+VEYCE+LVTQ VQ++AL++LEP L ME + +G D + +PA T XXXX LAW CV+AAR+A+ L+P LTAHALLPA+ALRLPHSC PA RVPAGDRRSYN GGG GAAG PL VA VALRD+ +G LSCSWVD +EPFS RM+RL EYSRV P XX P A A + V G G PRG GCGCPKC VES GG G +G S E LL A+QAVDEDR ALRLW+DGLALSP H +L++EAEKY+ALAFWLD +GD A R S XXXXXXXXXX ++ A A ++ +NL+++FMAGDGEWVC TR+P +SASEC+A+I+EAE+K XXXXXXXXX SGWGT+RHYAVPTTDVAVRELPRTLAWFN AMRTRIGP +A AA+LG G F + +R L P H H VC+A + A SD D +G XXXX L LRRLRVHDAFVVRYD+AAQRSLPLHTDQGELSLTISLNG EYEGGGTWFEGLGRAVRPEEAGHVV FP Sbjct: 141 ELEAAAVREITEA-FPRGWIADVSPPXXXXXXXXXXXX---IRESWTLLLEALE------SKVVSGGTEAGTGAVAALXXXXXXXXXXAVLIDPGSFPLLLGRRFHESVVRGLAANLLEVEVESPVVEYCEALVTQGDDVQRQALKVLEPTLNDMEDESDFPDSDEIIIVSSSSSNGVA------SDSEGERDGSVDINGRRAPATSRSSTENLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXLAWRCVEAARSASRLLPRLTAHALLPASALRLPHSCTPAARVPAGDRRSYNVGGGGVVSGAPTAGAAGWPLAVATVALRDLAAGEALSCSWVDPEEPFSVRMARLEEYSRVP---PWASDDXXXVPTAGDCAASSCPLEGXXXXXXXXXNDCRGSKETGVSGRSGEGTLASLQFPRGR--------GCGCPKCLVES--GGLAGGGSEGVSSAGA-AERLLKVAQQAVDEDR-------------------------------------ALRLWKDGLALSPNHPELKREAEKYQALAFWLDPGEGD-ANTDARSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDDGFTAPAQLP--------------------AGEAFDNLDVDFMAGDGEWVCSTRLPLISASECSAIINEAEEKAXXXXXXXXXXXXXXXXXXXSGWGTSRHYAVPTTDVAVRELPRTLAWFNRAMRTRIGPTVAVAAALGGGIFERPGRRSGSLE-----LSPPVAKPHAKDEDFPAHAVCSAADSDEAAAAIALIAPEDGQKGRQVESDDDQEGQSREAEEPRGRAGAPXXXXXALMLRRLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNGTGEYEGGGTWFEGLGRAVRPEEAGHVVVFP 962
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Match: D7G7N2_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N2_ECTSI) HSP 1 Score: 374 bits (961), Expect = 1.530e-114 Identity = 262/487 (53.80%), Postives = 299/487 (61.40%), Query Frame = 1 Query: 1771 GCGGCGCPKCAVESRVGGSGRWGGDGSR--SEDLGVEPLLAAARQAVDEDRFDDAFDTLRWAARAAPESAEVLYRAGVCAINQGRWSRALRLWRDGLALSPGHRQLRQEAEKYRALAFWLDRRDGDGAGATERESADDAAPPFSXXXXXXXXXXAVKRDSGETNPDPLDLPGEEEEGELAAXXXXXXXXXXXXXXXXXXXXXXXXXARQSAENLEIEFMAGDGEWVCRTRVPPLSASECAAVISEAEKKXXXXXXXXXXS--------SGWGTARHYAVPTTDVAVRELPRTLAWFNAAMRTRIGPIIAAAASLGDGAFAQQRKRRRRPRRPWRGLPP--EPGAQH----GHGVCAAPFTTPKVAGA---------------------SDGDSDGXXXXXXXXXXXXXXXXXXXARLFLRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNGASEYEGGGTWFEGLGRAVRPEEAGHVVAFP 3120 GCG CGCPKC VES G GDGS S E LL AA+QAVDEDRFDDAF+ L AARAAP+++++LYRAGVCAINQGRWSRALRLWRDGLALSP H +L++EAEKY+ALAFWLD GD A R S+ +XXXXXXXXXX +++G A A ++ +NL+++FM G GEWVC TR+P LSASEC+A+++EAE+K XXXXXXXX GWGT+RHYAVPTTDVAVRELPRTLAWFN AMRTRIGP +A AA+LG G F + +R +R PP EP AQ VC+A + A SD D XXX XX L LRRLRVHDAFVVRYD+AAQRSLPLHTDQGELSLTISLNG EYEGGGTWFEGLG AVRPEEAGHVV FP Sbjct: 75 GCG-CGCPKCLVES-----GGLDGDGSEGMSGAGAAERLLKAAQQAVDEDRFDDAFEALSRAARAAPDNSDILYRAGVCAINQGRWSRALRLWRDGLALSPDHPELKREAEKYQALAFWLDPGKGD-ANPDARSSSGALVGAATXXXXXXXXXXXXXXXXXXX----XXXXXXQDDGFTATALLP---------------------AGEAFDNLDVDFMTGHGEWVCSTRLPLLSASECSAIVNEAEEKASXXXXXXXXXXXXXXXXXGGWGTSRHYAVPTTDVAVRELPRTLAWFNRAMRTRIGPTVAVAAALGGGVFERPGRRSGSLKR----SPPVAEPHAQDEDFPARAVCSAADSDEAAESAEALRASASVEPENGQERRQVESDDDQXXXXXEAEEPRGRPGAPTPXXPALMLRRLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNGTGEYEGGGTWFEGLGSAVRPEEAGHVVVFP 525
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Match: A0A7S4F157_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F157_CHRCT) HSP 1 Score: 121 bits (304), Expect = 1.790e-25 Identity = 128/451 (28.38%), Postives = 174/451 (38.58%), Query Frame = 1 Query: 1783 CGCPKCAVESRVGGSGRWGGDGSRSEDLGVEPLLAAARQAVDEDRFDDAFDTLRWAARAAPESAEVLYRAGVCAINQGRWSRALRLWRDGLALSPGHRQLRQEAEKYRALAFWLDRRDGDGAGATERESA---DDAAPPFSXXXXXXXXXXAVKRDSGETNPDPLDLPGEEEEGELAAXXXXXXXXXXXXXXXXXXXXXXXXXARQSAENLEIEFMAGDG---EWVCRTRVPPLSASECAAVISEAEKKXXXXXXXXXXSSGWGTARHYAVPTTDVAVRELPRTLAWFNAAMRTRIGPIIAAAASLGDGAFAQQRKRRRRPRRPWRGLPPEPGAQHGHGVCAAPFTTPKVAGASDGDSDGXXXXXXXXXXXXXXXXXXXARLFLRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNGASEYEGGGTWFEGLGRAVRPEEAGHVVAF 3117 C C +CA ES S GD + S DL +E LAA A+ E R DDA R A R + G ++ G W+ A R WR+G A +P H L + K A A A AT +++ AA P + + S + + P AA S E E DG VC T P LS ++CA+ I+ AE+ GW TARHYAVPTTD+ V + P LAWF MR+ + P +++ +G A +RVHDAF+V+Y +AAQ LP+H D+ +LS+T+ LN +SEY+GGGT+F L RAVRPE+ G ++AF Sbjct: 48 CACARCAWES----SEHENGD-AISGDLAME--LAAT--AMVEGRHDDAERFARMALRVDATDGNAWHLRGAALLSSGLWAAAHREWREGRARAPSHELLASQCAKDLAYA---------SASATRQDNEMGLPQAAAPSPPSSQLPSSSLSPSQPSSSSAVAVAETP-------TAAV------------------------VNSSVLFDEAEPCTNDGMRLRIVCST-APVLSQAQCASAIAMAEE-------FAQTEGGWTTARHYAVPTTDLPVHKCPCLLAWFKELMRSAVAPFLSSNFEVGADA----------------------------------------------------------------------------VRVHDAFIVKYHAAAQARLPMHFDESQLSITLPLNESSEYDGGGTYFYALRRAVRPEQ-GQLLAF 364
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Match: A0A7S4BI62_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BI62_CHRCT) HSP 1 Score: 108 bits (271), Expect = 1.350e-21 Identity = 73/226 (32.30%), Postives = 101/226 (44.69%), Query Frame = 1 Query: 2440 VCRTRVPPLSASECAAVISEAEKKXXXXXXXXXXSSGWGTARHYAVPTTDVAVRELPRTLAWFNAAMRTRIGPIIAAAASLGDGAFAQQRKRRRRPRRPWRGLPPEPGAQHGHGVCAAPFTTPKVAGASDGDSDGXXXXXXXXXXXXXXXXXXXARLFLRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNGASEYEGGGTWFEGLGRAVRPEEAGHVVAF 3117 VC T P LS ++CA+ I+ AE+ GW TARHYAVPTTD+ V + P LAWF MR+ + P +++ +G A +RVHDAF+V+Y +AAQ LP+H D+ +LS+T+ LN +SEY+GGGT+F L RAVRPE+ G ++AF Sbjct: 166 VCST-APVLSQAQCASAIAMAEE-------FAQTEGGWTTARHYAVPTTDLPVHKCPCLLAWFKELMRSAVAPFLSSNFEVGADA----------------------------------------------------------------------------VRVHDAFIVKYHAAAQARLPMHFDESQLSITLPLNESSEYDGGGTYFYALRRAVRPEQ-GQLLAF 306
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Match: F0Y9Z7_AURAN (Fe2OG dioxygenase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9Z7_AURAN) HSP 1 Score: 106 bits (264), Expect = 1.880e-19 Identity = 73/221 (33.03%), Postives = 97/221 (43.89%), Query Frame = 1 Query: 2458 PPLSASECAAVISEAEKKXXXXXXXXXXSSGWGTARHYAVPTTDVAVRELPRTLAWFNAAMRTRIGPIIAAAASLGDGAFAQQRKRRRRPRRPWRGLPPEPGAQHGHGVCAAPFTTPKVAGASDGDSDGXXXXXXXXXXXXXXXXXXXARLFLRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNGASEYEGGGTWFEGLGRAVRPEEAGHVVAFP 3120 P + A+ CA I+ AE GW TARH+AVPTTDV VRE+P L WFN A+R+ I P + A L RLRV DAF+V+Y +AAQRSLPLH+DQ ++S+T+ LN +++Y+GGGT+F L +AV +AG +VAFP Sbjct: 731 PVVPAASCADAIAIAEAHASH-------GGGWTTARHFAVPTTDVPVREVPALLKWFNDALRSSIFPALGALYGLDPA----------------------------------------------------------------------------RLRVIDAFLVKYSAAAQRSLPLHSDQSQISITLPLNSSADYDGGGTYFHDLRQAVN-RDAGGLVAFP 867
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Match: A0A7S2HJP0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HJP0_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.010e-18 Identity = 75/242 (30.99%), Postives = 99/242 (40.91%), Query Frame = 1 Query: 2458 PPLSASECAAVISEAEKKXXXXXXXXXXSSGWGTARHYAVPTTDVAVRELPRTLAWFNAAMRTRIGPIIAAAASLGDGAFAQQRKRRRRPRRPWRGLPPEPGAQHGHGVCAAPFTTPKVAGASDGDSDGXXXXXXXXXXXXXXXXXXXARLFLRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNGAS---------------------EYEGGGTWFEGLGRAVRPEEAGHVVAFP 3120 P +S SEC V+ A + GW T+RHY+VPTTD+ VR LPR L WF + R R+ P++ + + G+PP RRL V+DAF+V+Y + AQR LPLHTDQ LSLTI+LNG+ +EGGGT+FE +GR + P AG +VAFP Sbjct: 27 PVISESECRDVVVAANA-------YTQSAGGWATSRHYSVPTTDIPVRALPRVLDWFRSCCRKRLFPML-------ETLY---------------GVPP------------------------------------------------------RRLGVNDAFIVKYTAEAQRHLPLHTDQSALSLTIALNGSGGDDHHPSHEGGDADGPEDAVGSFEGGGTYFEQIGRPLCPC-AGGLVAFP 184
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Match: A0A7S0D5L2_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D5L2_MICPS) HSP 1 Score: 91.7 bits (226), Expect = 1.270e-17 Identity = 69/202 (34.16%), Postives = 84/202 (41.58%), Query Frame = 1 Query: 2458 PPLSASECAAVISEAEKKXXXXXXXXXXSSGWGTARHYAVPTTDVAVRELPRTLAWFNAAMRTRIGPIIAAAASLGDGAFAQQRKRRRRPRRPWRGLPPEPGAQHGHGVCAAPFTTPKVAGASDGDSDGXXXXXXXXXXXXXXXXXXXARLFLRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNGASEYEGGGTWF 3063 P L+ ECA IS AE GW TARHYAVPTTD+ V E+P L +NA + + +GP + A C F T AG S+ +RVHDAFVVRYD+ AQR LP H DQ E+S+T++LN EYEGGGT F Sbjct: 36 PFLTPEECADWISLAEAAAAAR-------GGWTTARHYAVPTTDLPVHEIPTLLPLWNAFLSSSLGPFLHA--------------------------------------C---FPTTVRAGGSN-------------------------------VRVHDAFVVRYDAEAQRFLPAHVDQSEISVTLALNALGEYEGGGTTF 158
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Match: A0A7S4EC20_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EC20_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 9.600e-17 Identity = 71/219 (32.42%), Postives = 91/219 (41.55%), Query Frame = 1 Query: 2464 LSASECAAVISEAEKKXXXXXXXXXXSSGWGTARHYAVPTTDVAVRELPRTLAWFNAAMRTRIGPIIAAAASLGDGAFAQQRKRRRRPRRPWRGLPPEPGAQHGHGVCAAPFTTPKVAGASDGDSDGXXXXXXXXXXXXXXXXXXXARLFLRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNGASEYEGGGTWFEGLGRAVRPEEAGHVVAFP 3120 +S+ CA I AE + GW TARH+AVPTTD+ V P L WFNA ++ I P +A +V GAS +LRV DAFVVRYD++ Q++LPLH+DQ E S+T+ LN S+YEGGGT+F L AV + G VV FP Sbjct: 470 VSSEACATAIELAEAHASA-------TDGWTTARHFAVPTTDLPVHASPDLLKWFNACLKDAIFPAVA-----------------------------------------------QVTGASS-----------------------------EKLRVIDAFVVRYDASKQKALPLHSDQSEYSITLPLNDRSQYEGGGTYFAALDEAVNCDTGGLVV-FP 604
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Match: A0A7S0SFI0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SFI0_9CHLO) HSP 1 Score: 84.7 bits (208), Expect = 2.610e-15 Identity = 59/175 (33.71%), Postives = 76/175 (43.43%), Query Frame = 1 Query: 2548 GWGTARHYAVPTTDVAVRELPRTLAWFNAAMRTRIGPIIAAAASLGDGAFAQQRKRRRRPRRPWRGLPPEPGAQHGHGVCAAPFTTPKVAGASDGDSDGXXXXXXXXXXXXXXXXXXXARLFLRRLRVHDAFVVRYDSAAQRSLPLHTDQGELSLTISLNGASEYEGGGTWFEGL 3072 GW +RHYAVPTTD+ + +P L+ +NA MR ++ P++AAA PE +V GA +R+RVHDAFVVRY +AAQ LP H DQ LS+T++LN EYEGGGT F L Sbjct: 6 GWPPSRHYAVPTTDIPIHAIPALLSQWNALMRDKLAPLLAAAC-------------------------PE-----------------EVRGA-------------------------------QRVRVHDAFVVRYSAAAQHHLPTHADQSLLSVTLALNPLGEYEGGGTVFSEL 107
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Match: A0A0L0FXL0_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FXL0_9EUKA) HSP 1 Score: 90.5 bits (223), Expect = 6.180e-15 Identity = 71/228 (31.14%), Postives = 89/228 (39.04%), Query Frame = 1 Query: 2440 VCRTRVPPLSASECAAVISEAEKKXXXXXXXXXXSSGWGTARHYAVPTTDVAVRELPRTLAWFNAAMRTRIGPIIAAAASL-GDGAFAQQRKRRRRPRRPWRGLPPEPGAQHGHGVCAAPFTTPKVAGASDGDSDGXXXXXXXXXXXXXXXXXXXARLFLRRLRVHDAFVVRYDSAAQR-SLPLHTDQGELSLTISLNGASEYEGGGTWFEGLGRAVRPEEAGHVVAF 3117 V R++ P + E V+ E+ GWGT RH +VPTTDVAV ++P W MR + P++ A L DG R GD R+R+HDAFVVRYD+A + SLP H+D LS T++L S YEGGGTWF LG V AGH VAF Sbjct: 264 VFRSKKPIIPEDERQMVLDACEQ------FAADNGGGWGTVRHCSVPTTDVAVEDIPILRPWLRTLMRKCLAPMLRACFPLLADGTDLGPR----------------------------------------GD----------------------------RVRIHDAFVVRYDAADRSVSLPTHSDTSSLSFTVALTEQSGYEGGGTWFGALGGKVVDAPAGHAVAF 417 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5527.13815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5527.13815.1 >prot_L-elsbetiae_contig5527.13815.1 ID=prot_L-elsbetiae_contig5527.13815.1|Name=mRNA_L-elsbetiae_contig5527.13815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1040bp LLQPVFPCSAGCGAIYCSEGCRRRCWESGAHSALCLGLVADEDHPLVQHKback to top mRNA from alignment at L-elsbetiae_contig5527:502..7973+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5527.13815.1 ID=mRNA_L-elsbetiae_contig5527.13815.1|Name=mRNA_L-elsbetiae_contig5527.13815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7472bp|location=Sequence derived from alignment at L-elsbetiae_contig5527:502..7973+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5527:502..7973+ >mRNA_L-elsbetiae_contig5527.13815.1 ID=mRNA_L-elsbetiae_contig5527.13815.1|Name=mRNA_L-elsbetiae_contig5527.13815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6240bp|location=Sequence derived from alignment at L-elsbetiae_contig5527:502..7973+ (Laminarionema elsbetiae ELsaHSoW15)back to top |