mRNA_L-elsbetiae_contig5522.13808.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5522.13808.1
Unique NamemRNA_L-elsbetiae_contig5522.13808.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Match: D8LM51_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM51_ECTSI)

HSP 1 Score: 473 bits (1217), Expect = 1.830e-167
Identity = 245/274 (89.42%), Postives = 261/274 (95.26%), Query Frame = 1
Query:    1 MRSINVVIALLFGYFVAAVSDNNGDDYVVSTKIDAAESITFLWVFTYPLTVYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLGDGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAGDSRRSRFIVACSLGLGLGVTIAPAWATNNLWPCSDCGEALQSFRDGVILVLSTGYSMGCASAIILNQIIPNEVMEAALP-TKAVNE 819
            MRSINVV+ALLFGYFVAAVS+NNG+DYVVS KIDAA+SITFLWVFTYPL+VY PL+LPSILAFIVTTVETIGDVTTTAEVS+L+V   EHFQRIRGGLLGDGISSFL++L TSMPNTTFSQNNGVIALTRCASRRAG+ACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKIL+SAGDSRRSRFIVACS+GLGLGVTIAPAWATNNLWPCSDCGE L+SFRDGVILVLSTGYSMGCA+AIILN IIPNE ME  LP TKA+ E
Sbjct:    1 MRSINVVVALLFGYFVAAVSENNGNDYVVSDKIDAADSITFLWVFTYPLSVYPPLILPSILAFIVTTVETIGDVTTTAEVSRLNVDSEEHFQRIRGGLLGDGISSFLAALGTSMPNTTFSQNNGVIALTRCASRRAGLACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILSSAGDSRRSRFIVACSMGLGLGVTIAPAWATNNLWPCSDCGEELRSFRDGVILVLSTGYSMGCAAAIILNLIIPNEAMEEELPVTKAIFE 274          
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Match: A0A5J4Y735_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y735_9CHLO)

HSP 1 Score: 285 bits (728), Expect = 1.140e-88
Identity = 147/265 (55.47%), Postives = 191/265 (72.08%), Query Frame = 1
Query:    1 MRSINVVIALLFGYFVAAV-SDNNGDDYVVSTKIDAAESITFLWVFTYPLTVYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLGDGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAGDSRRSRFIVACSLGLGLGVTIAPAWATNNLWPC-SDCGEALQSFRDGVILVLSTGYSMGCASAIILNQIIPNEVME 789
            MR+  V+IALL GY V+AV + N G  Y+ S+    A SITFLWV T+    YAP VLP ++ F++TTVE IGD+T T E S L     +H +R++GGLLGDGI+SF ++L  S+PNTTF+QNNGV+ALTRCASR AG +C  WL +FG+LAK+ AFFTSIP CVLGGMTTFLFA V VSGIK+++    +RRSRFI+  ++GLGLGVTI P WATNNLW         L  FR+  ILVLS G+S+GC  +++L+  +P + ++
Sbjct:  286 MRNCEVIIALLLGYMVSAVITSNGGQKYITSSDFSTAPSITFLWVKTFGFGFYAPAVLPFLIGFVLTTVEAIGDITATEEASALATFGDKHNRRVQGGLLGDGINSFFAALAGSLPNTTFAQNNGVLALTRCASRTAGYSCGIWLFLFGVLAKVGAFFTSIPQCVLGGMTTFLFAGVCVSGIKVISMDPLTRRSRFILCVAVGLGLGVTIVPNWATNNLWDVYPTTASGLAGFRNACILVLSNGFSVGCIISVLLHLALPFDAVD 550          
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Match: A0A087SI12_AUXPR (Uric acid-xanthine permease n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SI12_AUXPR)

HSP 1 Score: 283 bits (724), Expect = 1.160e-88
Identity = 141/260 (54.23%), Postives = 188/260 (72.31%), Query Frame = 1
Query:    1 MRSINVVIALLFGYFVAAVSDNNGDDYVVSTKIDAAESITFLWVFTYPLTVYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLGDGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAGDSRRSRFIVACSLGLGLGVTIAPAWATNNLWPCSDCGEALQSFRDGVILVLSTGYSMGCASAIILNQIIPNE 780
            +R+  V+I+LLFGY +A V+  +G  +V  TKI  A +ITFLWV T+PL VY P VLP I+ F +T++ET+GDV  T E S L  + P H +R RG LL DGIS   S+L TS+P TTF+QNNG+IALT  ASR+AG ACA WL +FG++ K     T+IP+CVLGGMTTFLFANV  SGIKI+ S   +RR+RF++AC+L LG+GVT+ P WA NNLW   +  E +Q  RD +IL+L TG+++G  +AI+LN ++P+E
Sbjct:  242 LRNCAVIISLLFGYMLAGVTRADGKRFVTGTKIANAPAITFLWVHTFPLNVYGPAVLPLIIVFTITSIETVGDVAATEEASFLQTSGPAHNKRTRGALLNDGISGIFSALATSLPLTTFAQNNGIIALTAVASRQAGWACAGWLFIFGLIGKFGGVITTIPNCVLGGMTTFLFANVIASGIKIMISQHFTRRNRFVIACALALGIGVTLVPNWAQNNLWNNPNLSEGVQGVRDALILILETGFTLGALTAIVLNLLLPDE 501          
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Match: E1ZE94_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZE94_CHLVA)

HSP 1 Score: 284 bits (727), Expect = 1.890e-88
Identity = 139/256 (54.30%), Postives = 184/256 (71.88%), Query Frame = 1
Query:   13 NVVIALLFGYFVAAVSDNNGDDYVVSTKIDAAESITFLWVFTYPLTVYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLGDGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAGDSRRSRFIVACSLGLGLGVTIAPAWATNNLWPCSDCGEALQSFRDGVILVLSTGYSMGCASAIILNQIIPNE 780
            NV+IALLFGY +A ++  +G  +V   KI AA +ITFLWV T+PL +YAPL+LP ++ F +T++ET+GDV  T E S +    P H +RIRG LL DGI    S+L TS+P TTF+QNNGVI+LT  ASR+AG +CA WL V G++AK AA  T+IPDCV GGMTTFLFANV  SGIKI+     +RR+R I+A S+ LG+GVT+ P WATN LWPC+ C E ++  ++ VI +L TG+ +G  +AI LN ++P E
Sbjct:  325 NVIIALLFGYMIAGIATYDGAKFVTGAKISAAPAITFLWVHTFPLKIYAPLILPMLIVFTITSIETVGDVAATEEASFISTEGPSHDKRIRGALLNDGIGGIFSALATSLPLTTFAQNNGVISLTAVASRQAGWSCAIWLFVLGVIAKFAAVITTIPDCVFGGMTTFLFANVIASGIKIIVGDHLTRRNRVILAFSMALGVGVTLVPQWATNALWPCTGCSEGVKGLQEAVITILETGFCIGALTAIFLNLVLPME 580          
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Match: A0A2P6V3N6_9CHLO (Uric acid-xanthine permease isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3N6_9CHLO)

HSP 1 Score: 284 bits (727), Expect = 8.250e-86
Identity = 152/271 (56.09%), Postives = 187/271 (69.00%), Query Frame = 1
Query:    1 MRSINVVIALLFGYFVAAVSDNNGDDYVVSTKIDAAESITFLWVFTYPLTVYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLGDGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAGDSRRSRFIVACSLGLGLGVTIAPAWATN--NLWPCSDCGEALQSFRDGVILVLSTGYSMGCASAIILNQIIP-NEVMEAALPT 804
            MR+  VVIALLFGYFVA VS  +G  +V S +ID A +ITFLWV T+PL +Y PLVLP ++ F +T +ET+GDVT T E S L  T P H  RIRG LL DG+SS  S+L TS+P TTF+QNNGVI+LT  ASR+AG ACA WL + G+LAK     TSIPDCV GGMTTFLFANV  SG+KI+     SRR+R I+A S  LG+GVT+ P WA+N   LWP S   E ++  R+ VI +L TG+ +G  +AI LN I+P  E M    PT
Sbjct:  289 MRNCEVVIALLFGYFVAGVSTYDGKRFVTSAEIDNAPAITFLWVHTFPLKIYGPLVLPMLIIFCITCIETVGDVTATEEASFLSTTGPGHETRIRGALLNDGLSSIFSALATSLPLTTFAQNNGVISLTAVASRQAGWACAIWLFLMGVLAKFGGIITSIPDCVFGGMTTFLFANVIASGVKIIVGQHLSRRNRIIMAFSFALGIGVTLVPQWASNPNGLWPYSGTNETVKGIREAVITILDTGFCIGAITAIFLNLILPAEEAMVVPQPT 559          
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Match: A8IB05_CHLRE (Predicted protein n=6 Tax=Chlamydomonas TaxID=3052 RepID=A8IB05_CHLRE)

HSP 1 Score: 277 bits (709), Expect = 2.370e-85
Identity = 145/273 (53.11%), Postives = 194/273 (71.06%), Query Frame = 1
Query:    1 MRSINVVIALLFGYFVAAVSDNNGDDYVVSTKIDAAESITFLWVFTYPLTVYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLGDGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAGD--SRRSRFIVACSLGLGLGVTIAPAWATNNLWPCSD-CGEALQSFRDGVILVLSTGYSMGCASAIILNQIIPNEVMEAALPTKA 810
            MR+ +V++ALLFGYF+AAV++  G  YV++TKID A  ITFLW  T+PL  Y P ++P ++ FI+T++ET+GD   T E S++ V   +  +RI+G LL DGIS   S+L TS+P TTF+QNNGVI+LT  A+R+AG A A WL++ GIL K+ A+ T+IP+CVLGGMTTFLFANV  SGIKI+ + GD  +RRSRFI+ACSL L  GV + P WAT NLWP +      L+  RD +ILV+ST +++G   A+ILN IIP +       TKA
Sbjct:  318 MRNASVILALLFGYFIAAVTNYQGKKYVITTKIDQAPGITFLWTTTFPLGFYPPAIIPLMIVFIITSIETVGDTAATLEASRMQVNTEDGTRRIKGALLNDGISGIFSALATSLPLTTFAQNNGVISLTNVAARQAGFAAAFWLLLLGILGKVGAWITTIPECVLGGMTTFLFANVIASGIKIIIN-GDPLTRRSRFILACSLALAFGVELVPQWATLNLWPVTPGMSPGLRGLRDAIILVISTSFTLGAVVALILNLIIPADASTNPSTTKA 589          
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Match: A0A1Z5KLZ2_FISSO (Nucleobase:cation symporter-2, NCS2 family n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLZ2_FISSO)

HSP 1 Score: 273 bits (699), Expect = 1.020e-84
Identity = 144/267 (53.93%), Postives = 186/267 (69.66%), Query Frame = 1
Query:    1 MRSINVVIALLFGYFVAAVSDNNGDDYVVSTKIDAAESITFLWVFTYPLTVYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLGDGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAG-DSRRSRFIVACSLGLGLGVTIAP--------AWATNNLWPCSDCGEALQSFRDGVILVLSTGYSMGCASAIILNQIIP 774
            M++ NV IAL+FGYF+AAVSD NG  YV   KI  A+ ITFLWV T+PL VY P V+P ++A++VTTVET+GD+T T E S L     ++   ++GGL  D   S LS + TSMPNTTFSQNNGVI+LT+CASRR+G ACA WLI  G+L+K A   TSIPDCV+GGMT FLFANV  SGI +  +    SRR++FI+A SL +G+GV++ P        +  T N W C DC E+L+  R+GV + LSTGY +G   A++LN I+P
Sbjct:  281 MKNCNVFIALMFGYFIAAVSDYNGLQYVTKDKIADADPITFLWVETFPLGVYGPAVIPMLIAYLVTTVETVGDITATFEASDLPTDTEDYEGSVQGGLTSDAFCSILSGIFTSMPNTTFSQNNGVISLTKCASRRSGYACAFWLITMGVLSKFAGVITSIPDCVIGGMTIFLFANVLASGIALTGNIDLHSRRNKFILALSLAIGVGVSVWPFAFQDMRASSYTANFWRCEDCSESLKGIRNGVSIFLSTGYCVGTVIAMLLNLILP 547          
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Match: A0A835SW08_CHLIN (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835SW08_CHLIN)

HSP 1 Score: 275 bits (702), Expect = 1.580e-84
Identity = 143/263 (54.37%), Postives = 190/263 (72.24%), Query Frame = 1
Query:    1 MRSINVVIALLFGYFVAAVSDNNGDDYVVSTKIDAAESITFLWVFTYPLTVYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLGDGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAGD--SRRSRFIVACSLGLGLGVTIAPAWATNNLWPCSD-CGEALQSFRDGVILVLSTGYSMGCASAIILNQIIPNE 780
            MR+ +V++ALLFGY +AAV++ NG  YV++TKID A  ITFLW  T+PL  Y P V+P ++ FI+T++ET+GD   T E S++ V   +  +RI+G LL DGIS   S+L TS+P TTF+QNNGVI+LT  A+R+AG A A WL + GIL K+ A+ T+IP+CVLGGMTTFLFANV  SGIKI+ + GD  +RRSRFI+ACSL L  GV + P WAT NLWP +      L+  RD +ILV+ST +++G   A+ILN IIP +
Sbjct:  314 MRNASVILALLFGYLIAAVTNYNGKKYVITTKIDQAPGITFLWTTTFPLGFYGPAVIPLMIVFIITSIETVGDTAATMEASRMAVDTEDGTRRIKGALLNDGISGIFSALATSLPLTTFAQNNGVISLTNVAARQAGFAAAFWLFLLGILGKVGAWITTIPECVLGGMTTFLFANVIASGIKIIIN-GDPLTRRSRFILACSLALAFGVELVPQWATLNLWPVTPGMSPGLRGLRDAIILVISTSFTLGAVVALILNLIIPKD 575          
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Match: B8CGC1_THAPS (Xanthine uracil permease (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CGC1_THAPS)

HSP 1 Score: 270 bits (691), Expect = 1.890e-84
Identity = 140/267 (52.43%), Postives = 189/267 (70.79%), Query Frame = 1
Query:    1 MRSINVVIALLFGYFVAAVSDNNGDDYVVSTKIDAAESITFLWVFTYPLTVYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLGDGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAG-DSRRSRFIVACSLGLGLGVTIAP--------AWATNNLWPCSDCGEALQSFRDGVILVLSTGYSMGCASAIILNQIIP 774
            M++ NVV+ALLFGY VA VS+  G +YV    ++ AE +TFLWV T+P++ Y P V+P ++A+ VTTVETIGD+T T E S+L +   E+   ++GGL  D I+S LSSLMTS PNTTFSQNNGVI +T+CASRRAG AC  WLI+ G+ +K+A   +SIPDCV+GGMT FLFANV  SG+ +  +   +SRR++FI+A SL +G+GVT+ P        +  T   W CSDC E ++  R+GV + LSTGY +G A A++LN I+P
Sbjct:  238 MKNCNVVLALLFGYMVAGVSNYEGLNYVNFDNLELAEPVTFLWVETFPISFYGPAVVPLLIAYFVTTVETIGDLTATCEASELPIEGEEYESSLQGGLTADAINSILSSLMTSPPNTTFSQNNGVIGITKCASRRAGFACGVWLILLGVFSKVAGIISSIPDCVIGGMTIFLFANVLASGVNLSRNVDLNSRRNKFILAMSLAVGVGVTVWPYAFLDMRNSPYTAAFWTCSDCSETMKGVRNGVSIFLSTGYCVGTAIAVLLNMILP 504          
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Match: K8EH54_9CHLO (Purine permease n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EH54_9CHLO)

HSP 1 Score: 272 bits (695), Expect = 2.230e-84
Identity = 144/286 (50.35%), Postives = 195/286 (68.18%), Query Frame = 1
Query:    1 MRSINVVIALLFGYFVAAVSDNNGDDYVVSTKIDAAESITFLWVFTYPLTVYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLGDGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAG-DSRRSRFIVACSLGLGLGVTIAP--------AWATNNLWPCS-------DCGEALQSFRDGVILVLSTGYSMGCASAIILNQIIPNEVMEAALPTKA 810
            M++ NV+IALLFGYFVA VS   G+ +V  TKI+ AE ITF WV  +P+  Y P VLP ++AF+VTTVETIGD+T T E S+ D    E  + ++GGLL DG+ SF ++L T MPNTTFSQNNGVIALT+CASRRAG+ C  WLI  G+L+KI+   +S+PDCV+GGMTTFLF NV VSG+ +++ A  +SRR+R I+A S+G+GLGVT  P        +  T   WPC+       DC +  +  RDG++++L+T YS+G   A+ L+ I+P ++      T A
Sbjct:  280 MKNANVIIALLFGYFVAGVSRAEGNKFVPDTKIENAEPITFAWVENFPIGFYGPAVLPLLIAFLVTTVETIGDLTATYEASEEDTESEEFDKSVQGGLLSDGLCSFAAALATGMPNTTFSQNNGVIALTKCASRRAGVCCGLWLIALGVLSKISGIISSMPDCVVGGMTTFLFCNVFVSGLSVVSKADLNSRRNRIILAISMGVGLGVTAVPWIFGDQRASGGTTPFWPCTGPFREGADCSKGERGIRDGILILLTTPYSIGTLLAMFLHAILPTDMEVVGYGTDA 565          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5522.13808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM51_ECTSI1.830e-16789.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5J4Y735_9CHLO1.140e-8855.47Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A087SI12_AUXPR1.160e-8854.23Uric acid-xanthine permease n=3 Tax=Auxenochlorell... [more]
E1ZE94_CHLVA1.890e-8854.30Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A2P6V3N6_9CHLO8.250e-8656.09Uric acid-xanthine permease isoform A n=1 Tax=Micr... [more]
A8IB05_CHLRE2.370e-8553.11Predicted protein n=6 Tax=Chlamydomonas TaxID=3052... [more]
A0A1Z5KLZ2_FISSO1.020e-8453.93Nucleobase:cation symporter-2, NCS2 family n=2 Tax... [more]
A0A835SW08_CHLIN1.580e-8454.37Uncharacterized protein n=3 Tax=Chlamydomonas TaxI... [more]
B8CGC1_THAPS1.890e-8452.43Xanthine uracil permease (Fragment) n=1 Tax=Thalas... [more]
K8EH54_9CHLO2.230e-8450.35Purine permease n=1 Tax=Bathycoccus prasinos TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5522contigL-elsbetiae_contig5522:1209..3727 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score476.5
Seed ortholog evalue8.5e-132
Seed eggNOG ortholog2880.D8LM51
KEGG koko:K03458
KEGG TC2.A.40
Hectar predicted targeting categorysignal peptide
GOsGO:0000322,GO:0000323,GO:0000324,GO:0002054,GO:0002060,GO:0003674,GO:0005215,GO:0005345,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005775,GO:0005776,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006863,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0010008,GO:0012505,GO:0015075,GO:0015143,GO:0015205,GO:0015711,GO:0015747,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031090,GO:0031224,GO:0031226,GO:0031410,GO:0031974,GO:0031982,GO:0034220,GO:0034423,GO:0036094,GO:0042906,GO:0042907,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0070013,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:0097159,GO:0097708,GO:0098588,GO:0098655,GO:0098656,GO:0098805,GO:1901363,GO:1901702,GO:1904823
EggNOG free text desc.xanthine transmembrane transporter activity
EggNOG OGs2QQD4@2759,COG2233@1
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Ec32 ortholog descriptionXanthine/uracil/vitamin C permease
Ec32 orthologEc-06_002480.1
Exons5
Model size819
Cds size819
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5522.13808.1prot_L-elsbetiae_contig5522.13808.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5522 1209..3727 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816581.569632-CDS-L-elsbetiae_contig5522:1208..13141622816581.569632-CDS-L-elsbetiae_contig5522:1208..1314Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5522 1209..1314 +
1691683662.4722931-CDS-L-elsbetiae_contig5522:1208..13141691683662.4722931-CDS-L-elsbetiae_contig5522:1208..1314Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5522 1209..1314 +
1622816581.579372-CDS-L-elsbetiae_contig5522:1503..16731622816581.579372-CDS-L-elsbetiae_contig5522:1503..1673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5522 1504..1673 +
1691683662.4830773-CDS-L-elsbetiae_contig5522:1503..16731691683662.4830773-CDS-L-elsbetiae_contig5522:1503..1673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5522 1504..1673 +
1622816581.5888941-CDS-L-elsbetiae_contig5522:1980..21601622816581.5888941-CDS-L-elsbetiae_contig5522:1980..2160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5522 1981..2160 +
1691683662.4964733-CDS-L-elsbetiae_contig5522:1980..21601691683662.4964733-CDS-L-elsbetiae_contig5522:1980..2160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5522 1981..2160 +
1622816581.5990622-CDS-L-elsbetiae_contig5522:2766..29971622816581.5990622-CDS-L-elsbetiae_contig5522:2766..2997Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5522 2767..2997 +
1691683662.506172-CDS-L-elsbetiae_contig5522:2766..29971691683662.506172-CDS-L-elsbetiae_contig5522:2766..2997Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5522 2767..2997 +
1622816581.6113517-CDS-L-elsbetiae_contig5522:3595..37271622816581.6113517-CDS-L-elsbetiae_contig5522:3595..3727Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5522 3596..3727 +
1691683662.5210176-CDS-L-elsbetiae_contig5522:3595..37271691683662.5210176-CDS-L-elsbetiae_contig5522:3595..3727Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5522 3596..3727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5522.13808.1

>prot_L-elsbetiae_contig5522.13808.1 ID=prot_L-elsbetiae_contig5522.13808.1|Name=mRNA_L-elsbetiae_contig5522.13808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=273bp
MRSINVVIALLFGYFVAAVSDNNGDDYVVSTKIDAAESITFLWVFTYPLT
VYAPLVLPSILAFIVTTVETIGDVTTTAEVSKLDVTDPEHFQRIRGGLLG
DGISSFLSSLMTSMPNTTFSQNNGVIALTRCASRRAGIACACWLIVFGIL
AKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILASAGDSRRSRFIVACS
LGLGLGVTIAPAWATNNLWPCSDCGEALQSFRDGVILVLSTGYSMGCASA
IILNQIIPNEVMEAALPTKAVNE
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mRNA from alignment at L-elsbetiae_contig5522:1209..3727+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5522.13808.1 ID=mRNA_L-elsbetiae_contig5522.13808.1|Name=mRNA_L-elsbetiae_contig5522.13808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2519bp|location=Sequence derived from alignment at L-elsbetiae_contig5522:1209..3727+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGCAGCATCAACGTCGTCATCGCCCTCCTGTTCGGCTACTTCGTGGC CGCCGTATCGGACAACAACGGCGACGACTACGTCGTTTCCACCAAGATCG ACGCCGGTGCGCGTCTGTGTGTAAAACCAGCAGCACTTACTCCCAGAATG TTTTTGCCAGGCACGACGGTACCCGCGCTCTTTCCCGACTTGACAATCCC GGCGTCTGAAGAGATGCCAGGTCTATGGTCTCGTACGGCTTTGGTCAATA AGTACCCCCCCCCCCGCCCCTCCTCTGTCTCCGCCCCTTCTGCAGCCGAA AGCATCACTTTCCTGTGGGTGTTCACGTACCCCCTGACGGTGTACGCGCC GCTGGTCCTTCCTAGCATCTTGGCCTTTATCGTGACCACCGTGGAGACCA TCGGAGACGTTACCACCACCGCCGAGGTGTCCAAGCTCGACGTCACCGAC CCCGAGCACTTCCAGGTCCGAACGAGCGCCACGGGCTGTCACTGCTGCTG TCGCTCGCTGCCGTGATATCGTGCCGTCACGCGTACGCACGTGCGGAAGG CACGAACGCGGGGCGAAATGTACTTTGCTTCACCGTGGGTGGTAATAGTT TACGCGTTTGTATACGCCAGCGACAGGAGGAGCTGTTGGTGCCGGTGTTT TTGGTGGATATCCTGCGGGTTTGTAATCACCGCGTGTGTGTATACCTCGT CGTCGTCGTCTTGTACCGCCGTGCTTGTCCCCGACCATACATACCCCCCC CCCCCATCCCAAAATCTTGCAGAGGATACGTGGCGGCCTCCTGGGCGACG GCATCTCCAGCTTTTTGTCATCCCTGATGACCAGCATGCCCAACACCACC TTCTCGCAGAACAACGGCGTCATCGCGCTCACGCGGTGCGCGTCCCGCCG CGCCGGCATCGCTTGCGCGTGCTGGCTCATCGTGTTCGGCATCCTCGCCA AGGTGTGTGTGTGCCGGCTCGACTTCTAGGTTTTGCTCGCAGCCAGCCTA TTTCGCCGCCTGCGTGATGTACCTTGGGAGCGGCTTCGGCAGTTTGAGTG CACGGCCCGAGGCCAAGCACTCAGGGTGAGCTTCCGCTTCGTTTTGCGTT GTTTTATTGGTGGAGAAACAACAACACAGTCGAGTAGGTGATTTATCTCT CTATCTATCTCTCTCGTGGCGGCGGGTTGTTGTTGCGATGCGGAGTGATA CTCGGGACTCTTTGCTGCCCCTTGCAGCTGCATTTATGTCTTGGATCCTT CGAGACACGTGATCATGCCATGCCAAATGAAATTATGGTCTGTCGATAGT GAACCCTCAACACCCTCCCCGCCCCTCGTAAATCTATAGTTTTTTTTTCC TGTCCTATATCACGCAATCTTCCGTCGCCCCGTCCCCCCTTGCCTCATAC CTCTTCCCTCCCTCGCCCTGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCT GCTCGACGTTTGATGCAAACAACGCTAACATCCACCACCCCAAAAAAATT AACCAACCCACCAATTAATTCCCCACCCCGAACACACCGCCTAAATACAA TAAAACAGATCGCGGCGTTCTTCACGTCCATCCCCGACTGCGTCCTCGGC GGCATGACCACCTTCCTCTTCGCCAACGTGGCCGTGAGCGGGATCAAGAT CCTCGCCTCCGCCGGCGACTCCCGCCGGAGCCGCTTCATCGTGGCCTGCA GCCTGGGCCTCGGCCTCGGCGTTACCATCGCCCCGGCCTGGGCGACCAAC AACCTCTGGCCCTGCAGCGACTGCGGCGAGGCCCTCCAGGTTAGATCTAG TCGTGAGGGGAGAAAACAAAGAGAGAGAAGGAGCATTCGAGTGCAAAAAA AACGGGAGCAGAGTGCGTGTGGATCTACAATAAAGCGGAAGAAAAAAAAA AAAAACGCCGCGACGGAAAATTGAAGTGTAGAAAGGGAGGCTTTGTGGCC GAGAGGGCTTAGAATGCTGACGCCTCGTTGCGTTACGATTCGGATTGATG CGGCGAAGGTTTTTTTTTCAGCTTGTGGGGCTCAAACGTGTACAAATAGT CAAACTCTCACCTTCGATCGGCCCGTGCCCGTATTCCACTAACGGTTGCC CCCCCCCCCTCCCTCATCAATGGTTCTCTTATTATTATTTTATTTGCCAT CCGACATTTGCAGATGTATCCAACCAAAATTTCTTCCAAACTGATGATGC TCTTCTTACATGCTCGAACACACTGCGTAGATTGCACAAACCGTCAACAC TATGTTTCTCTTATACTATGCCTGACGCCTCTCCTCACTTCCCCTGCCCC CCTCACCCCCCAACGACGGTTCTTCAAATCCAAACGGGACGACATGCTCC GAACCACACACCATGGCGCCACATCAAACGGAAACAGTCCTTCCGCGACG GTGTCATCCTGGTCCTGAGCACCGGGTACAGCATGGGGTGCGCGTCGGCG ATCATCCTCAACCAAATCATCCCCAACGAGGTCATGGAGGCGGCTCTCCC CACGAAGGCCGTCAACGAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5522:1209..3727+

>mRNA_L-elsbetiae_contig5522.13808.1 ID=mRNA_L-elsbetiae_contig5522.13808.1|Name=mRNA_L-elsbetiae_contig5522.13808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1638bp|location=Sequence derived from alignment at L-elsbetiae_contig5522:1209..3727+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGCAGCATCAACGTCGTCATCGCCCTCCTGTTCGGCTACTTCGTGGC
CGCCGTATCGGACAACAACGGCGACGACTACGTCGTTTCCACCAAGATCG
ACGCCGATGCGCAGCATCAACGTCGTCATCGCCCTCCTGTTCGGCTACTT
CGTGGCCGCCGTATCGGACAACAACGGCGACGACTACGTCGTTTCCACCA
AGATCGACGCCGCCGAAAGCATCACTTTCCTGTGGGTGTTCACGTACCCC
CTGACGGTGTACGCGCCGCTGGTCCTTCCTAGCATCTTGGCCTTTATCGT
GACCACCGTGGAGACCATCGGAGACGTTACCACCACCGCCGAGGTGTCCA
AGCTCGACGTCACCGACCCCGAGCACTTCCAGCCGAAAGCATCACTTTCC
TGTGGGTGTTCACGTACCCCCTGACGGTGTACGCGCCGCTGGTCCTTCCT
AGCATCTTGGCCTTTATCGTGACCACCGTGGAGACCATCGGAGACGTTAC
CACCACCGCCGAGGTGTCCAAGCTCGACGTCACCGACCCCGAGCACTTCC
AGAGGATACGTGGCGGCCTCCTGGGCGACGGCATCTCCAGCTTTTTGTCA
TCCCTGATGACCAGCATGCCCAACACCACCTTCTCGCAGAACAACGGCGT
CATCGCGCTCACGCGGTGCGCGTCCCGCCGCGCCGGCATCGCTTGCGCGT
GCTGGCTCATCGTGTTCGGCATCCTCGCCAAGAGGATACGTGGCGGCCTC
CTGGGCGACGGCATCTCCAGCTTTTTGTCATCCCTGATGACCAGCATGCC
CAACACCACCTTCTCGCAGAACAACGGCGTCATCGCGCTCACGCGGTGCG
CGTCCCGCCGCGCCGGCATCGCTTGCGCGTGCTGGCTCATCGTGTTCGGC
ATCCTCGCCAAGATCGCGGCGTTCTTCACGTCCATCCCCGACTGCGTCCT
CGGCGGCATGACCACCTTCCTCTTCGCCAACGTGGCCGTGAGCGGGATCA
AGATCCTCGCCTCCGCCGGCGACTCCCGCCGGAGCCGCTTCATCGTGGCC
TGCAGCCTGGGCCTCGGCCTCGGCGTTACCATCGCCCCGGCCTGGGCGAC
CAACAACCTCTGGCCCTGCAGCGACTGCGGCGAGGCCCTCCAGATCGCGG
CGTTCTTCACGTCCATCCCCGACTGCGTCCTCGGCGGCATGACCACCTTC
CTCTTCGCCAACGTGGCCGTGAGCGGGATCAAGATCCTCGCCTCCGCCGG
CGACTCCCGCCGGAGCCGCTTCATCGTGGCCTGCAGCCTGGGCCTCGGCC
TCGGCGTTACCATCGCCCCGGCCTGGGCGACCAACAACCTCTGGCCCTGC
AGCGACTGCGGCGAGGCCCTCCAGTCCTTCCGCGACGGTGTCATCCTGGT
CCTGAGCACCGGGTACAGCATGGGGTGCGCGTCGGCGATCATCCTCAACC
AAATCATCCCCAACGAGGTCATGGAGGCGGCTCTCCCCACGAAGGCCGTC
AACGAATCCTTCCGCGACGGTGTCATCCTGGTCCTGAGCACCGGGTACAG
CATGGGGTGCGCGTCGGCGATCATCCTCAACCAAATCATCCCCAACGAGG
TCATGGAGGCGGCTCTCCCCACGAAGGCCGTCAACGAA
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