mRNA_L-elsbetiae_contig5516.13802.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5516.13802.1
Unique NamemRNA_L-elsbetiae_contig5516.13802.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Match: A0A6H5JG13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG13_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 1.590e-147
Identity = 255/499 (51.10%), Postives = 325/499 (65.13%), Query Frame = 1
Query:    1 MESLVVEPSTGLVGVSSLIKAAVPDLHPGSVLRSVNNVLNKSDGFEMTTKTVNGKIRRMASLDVCNYILENMPGHRWTVWRTANGESFKESLAQTVEQIRSSAIK-----------EVVEVPEEVKETKAKTLKKAFRTLDIEGSVRIDEASGKASVIDVIRVLSPGASVQYSAQLLIRLLENEDATDIGGVCILQTENADCIAARIQYIQINGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLCGEIEERCSHLSTTPEGKSFQNF-TVDSDSVQPVSKKTRFGPEIMELATEEEYAKYVRTVVSSIAMEEHVKKVKTEVSLIMALKGAFEVVAPLEPRHKIELCDKISDIQRRAF--------------GLVSEPT-GELVNIPKSTQDAGHGIPTPKCSHQVRGDEVSIAMIATSMGVSVRGRAGLVGRKLKELYADRYGTDAANGIPKR-NTIYAGRPYLENMYFARDKDLVERAIRLV 1413
            M+++VV+ + G VGVSS+IKAA P+LH GSVL SV + +   DG  +T K V G+   MASLD C YIL+NMPG RW +WR+  G SFKESL Q V       ++           E  EV +EV ETK  TLKKAFRTL+I+GSVRIDEASGKASV+DVIR+LSPG S+  + ++L RLLE ++ T++                  Q  Q++G    +P+    +       LP  AARSFRRQSAEVI RVLGGD SLCGEIE+RC+ L +T EG+S Q F + ++ + +  +K+TR GPEIME ATEE+Y KY++  +    +      VK+E+SL+M+LK AFE + PLEPR KIEL D++SD+Q+R F               + S  T  E   +  +  D GHG PTP CS  VRG EVSIAMIAT MGVSV GR GLVG+ +K LYA+RYG +AAN IPKR NT+Y GRP+ ENMYF RD+DLVERAIR+V
Sbjct:    1 MDNIVVD-AAGDVGVSSMIKAAKPELHSGSVLCSVRSAMKNFDGPGLTPKMVKGRTTTMASLDTCKYILDNMPGPRWVMWRSTQGNSFKESLTQHVAATHVQGVEDNVVEGVAQAAEAAEVEQEVAETKGSTLKKAFRTLNIDGSVRIDEASGKASVMDVIRLLSPGVSLDNARKMLSRLLEKDEVTELE-----------------QRGQLSGPQTHSPIMCTTSRSTEKGGLPR-AARSFRRQSAEVITRVLGGDVSLCGEIEQRCARLGSTSEGRSNQAFMSGENGTEEQPAKRTRVGPEIMEFATEEQYEKYIKAGLQQEMVNIQQAIVKSEISLVMSLKEAFEKIQPLEPRQKIELSDRLSDVQKRYFRGGEESAMPVRDVRAITSSSTPAENAVVVATAVDPGHGTPTPNCSRDVRGAEVSIAMIATEMGVSVGGRGGLVGKNIKALYAERYGQNAANNIPKRKNTVYQGRPFKENMYFTRDRDLVERAIRMV 480          
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Match: Q8QN79_ESV1K (EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K)

HSP 1 Score: 356 bits (914), Expect = 4.740e-115
Identity = 208/493 (42.19%), Postives = 298/493 (60.45%), Query Frame = 1
Query:    1 MESLVVEPSTGLVGVSSLIKAAVPDLHPGSVLRSVNNVLNKSDGFEMTTKTVNGKIRRMASLDVCNYILENMPGHRWTVWRTANGESFKESLAQTVEQIRSSAIKEVVEV--------PEEVKETKAKTLKKAFRTLDIEGSVRIDEASGKASVIDVIRVLSPGASVQYSAQLLIRLLENEDATDIGGVCILQ-TENADCIAARIQYIQINGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLCGEIEERCSHLSTTPEGKSFQNFTVDSDSVQPVSKKTRFGPEIMELATEEEYAKYVRTVVSSIAMEEHVKKVKTEVSLIMALKGAFEVVAPLEPRHKIELCDKISDIQRRAFGLVS----------EPTGELVNIP-KSTQDAGHGI--PTPKCSHQVRGDEVSIAMIATSMGVSVRGRAGLVGRKLKELYADRYGTDAANGIPKRNTIYAGRPYLENMYFARDKDLVERAIRLV 1413
            + ++V++ S+G V V S+IK  +P+L    +L++V+ VL   +G +M+T+ +NG++   A+L++C  IL+ M G  W  WR  +G +FK++L + VE +RSS+  E +          P +V   K   L+ A R+++I GSVRID+  GKAS+ID  R++ PGAS  Y+AQ+  R+LE E   D GG   +Q  ++   IA R+ YI+ING G  TPVSDAKTIVEIIWLLP+ AA+ FRRQSAE ICRVLGGD SLCGEIE+RC+ L +T EG+++Q+F  D     P  K+    P   E AT EE   Y+    ++  +      V  E+ +    K   + V   + R +IE  D+I D+QRRA  + +           P    V +P   T D   G+   TPKCS  VRG E SI + A  MG+SV  +AG VG+ +K LY++RYG +A   IPKR+T + G+P+ EN Y+ARD DL++R IR+V
Sbjct:    5 INNIVIDASSGDVAVKSMIKNIMPNLSESGILKTVHRVLGDYNGPKMSTRLMNGRLACAATLELCFDILDKMTGPPWRKWREESGNAFKKALRERVESVRSSSQTEQLXXXXXXXXXXPTQVG-IKTAVLQNALRSININGSVRIDDGLGKASIIDTTRLVCPGASSAYAAQMFTRVLEKE--RDDGGNSFMQDAQHPTPIADRVDYIRINGHGNVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLRSTEEGRAYQSFVTDQG---PAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLGEIDVFKTCKEELKSVGQFDQRDEIEFADRIKDVQRRATRVDNMITAAPTVDTSPVSVCVAMPVDDTIDPETGLLTATPKCSPSVRGPETSICVEAGKMGISVGEKAGQVGKVVKRLYSERYGQEAGRNIPKRSTTFRGKPFSENTYYARDSDLIQRGIRIV 491          
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Match: B5LW93_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LW93_9PHYC)

HSP 1 Score: 324 bits (831), Expect = 4.050e-103
Identity = 202/488 (41.39%), Postives = 290/488 (59.43%), Query Frame = 1
Query:    1 MESLVVEPSTGLVGVSSLIKAAVPDLHPGSVLRSVNNVLNKSDGFEMTTKTVNGKIRRMASLDVCNYILENMPGHRWTVWRTANGESFKESLAQTVEQIRSSAIKEVVEVPEEVKETKAKTLKKAFRTLDIEGSVRIDEASGKASVIDVIRVLSPGASVQYSAQLLIRLLENEDATDIGGVCILQTENADCIAARIQYIQINGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLCGEIEERCSHLSTTPEGKSFQNFTVDSDSVQPVSKKTRFGPEIMELATEEEYAKYVRTVVSS--IAMEEHVK-----------------KVKTEVSLIMALKGAFEVVAPL-EPRHKIELCDKISDIQRRAFGLVSEPTGELVNIPKSTQDAGHGIPTPKCSHQVRGDEVSIAMIATSMGVSVRGRAGLVGRKLKELYADRYGTDAANGIPKRNTIYAGRPYLENMYFARDKDLVERAI 1404
            M+S++V+ ++GL+GVSS++K  VP +   ++ R V   L  S   +   +       RM +LD   Y+++++     + WR AN ++FKE+L   V Q +++ +  V +   E  ETKA  L+   R+++I GS+R+DE +G  S+ID+++++ P     Y+   L R+LE                 ADC+    + ++ING G  TPV+DAKTI EIIWLLP  AAR FRRQSAE++ RVLGGD +LC EIEER   L +T EG++FQNF +  +S     +K R G E+ME A+ E+Y ++V+  V      ME+                    KV +E+ ++ +LK  F+ V  L E RHKIEL D +SDIQRRA         + V++ ++  D G  +PTP C   +RG+EVSIAM++  MGV + GRAG  G+KLK LY  RYG DAAN IPKR TI+ GRPY EN Y+ARDKDLV++AI
Sbjct:    1 MDSIIVDRASGLIGVSSIMKQIVPTVSDSTMWRMVEKTLRDSAVPKRHLRK-----SRMLTLDEAFYLVDHVQFPLSSEWRAANADTFKENLRSHV-QAKTAPL--VGDGGGESVETKASVLQNCLRSVNIIGSIRVDEDTGLGSLIDIVKIVCPDMCKVYAKTTLARVLEE-----------WPHHVADCV----KRLKINGRGHVTPVADAKTIAEIIWLLPGRAAREFRRQSAEIVMRVLGGDTTLCKEIEERSVGLQSTREGRAFQNFALGGES----GEKKRLGGELMEHASSEDYERFVKMKVEHEMCVMEQXXXXXXXXXXXXXXXXQEEGKVDSELRIVASLKRGFDAVNSLSESRHKIELSDIVSDIQRRALR-------KSVSV-ETAVDPGVSVPTPDCPANIRGEEVSIAMVSGEMGVHLGGRAGTAGKKLKVLYMARYGADAANNIPKRATIFQGRPYRENTYYARDKDLVQQAI 453          
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Match: A0A6H5K200_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K200_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 9.450e-101
Identity = 192/497 (38.63%), Postives = 284/497 (57.14%), Query Frame = 1
Query:    1 MESLVVEPSTGLVGVSSLIKAAVPDLHPGSVLRSVNNVLNKSDGFEMTTKTVNGKIRRMASLDVCNYILENMPGHRWTVWRTANGESFKESLAQTVEQIRSSAIKEVVEV--------PEEVKETKAKTLKKAFRTLDIEGSVRIDEASGKASVIDVIRVLSPGASVQYSAQLLIRLLENEDATDIGGVCILQTENADCIAARIQYIQINGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLCGEIEERCSHLSTTPEGKSFQNFTVDSDSVQPVSKKTRFGPEIMELATEEEYAKYVRTVVSSIAMEEHVKKVKTEVSLIMALKGAFEVVAPLEPRHKIELCDKISDIQRRAFGL------------------VSEPTGELVNIPKSTQDAGHGIPTPKCSHQVRGDEVSIAMIATSMGVSVRGRAGLVGRKLKELYADRYGTDAANGIPKRNTIYAGRPYLENMYFARDKDLVERAIRLV 1413
            + ++V++ S+G V V S+IK  +P+L  G +L++V+ VL   +G +M+T+ +NG++   A+L++C  IL+ M G  W  WR  +G +FKE+L + VE +RSS+  E  ++        P++V  T A  L+KA R+++I GSVRID+  GK S+ID  R++  GA   Y+AQ+  R+LE E+  D G   +   +    IA R+ YI+ING G+ TPVSD+KTIVEIIWLLP+ +A+ FRRQSAE ICRVLGGD SLCGEIE+RC+ L +T EG+++Q+F  D     P  K+    P   E AT EE   Y+    ++  +      V  +V +    K     V   +   +IE  D+I DIQRRA  +                   + P  + ++ P++ + AG      K    VRG E SI + A  MG SV              Y++RYG +A   IPKR+T + G+P+    Y+ARD DL++RAIR+V
Sbjct:    5 INNIVIDASSGDVAVKSMIKNIMPNLSEGGILKTVHRVLGDYNGPKMSTRLMNGRLACAATLELCYEILDKMSGPPWRKWREESGNAFKEALCERVESVRSSSQTEQFQLQSPPQPQPPQKVGITTA-VLQKALRSININGSVRIDDGCGKESIIDTTRLVCRGAYSAYAAQMFTRVLE-EERNDGGSSFMRGEQTPTPIADRVDYIRINGHGKVTPVSDSKTIVEIIWLLPSGSAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFVTDQG---PAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLRDVDVFETCKEKLNSVGQFDEGDEIEFADRIKDIQRRAKRVDNMITAAPAVDTSPISVCAAMPVDDTID-PETGEKAGQTGKVVKRLPSVRGPETSICVEAGKMGSSVXXXXXXXXXXXXXXYSERYGQEAGRKIPKRSTTFRGKPFSGKTYYARDSDLIQRAIRIV 495          
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Match: D8LPL9_ECTSI (EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL9_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 4.590e-100
Identity = 200/492 (40.65%), Postives = 278/492 (56.50%), Query Frame = 1
Query:    1 MESLVVEPSTGLVGVSSLIKAAVPDLHPGSVLRSVNNVLNKSDGFEMTTKTVNGKIRRMASLDVCNYILENMPGHRWTVWRTANGESFKESLAQTVEQIRSSAIKEVVEVP----EEVKETKAKTLKKAFRTLDIEGSVRIDEASGKASVIDVIRVLSPGASVQYSAQLLIRLLENEDATDIG--GVCILQTENADCIAARIQYIQINGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLCGEIEERCSHLSTTPEGKSFQNFTVDSDSVQPVSKKTRFGPEIMELATEEEYAKYVRTVVSSIAMEEHVKKVKTEVSLIMALKGAFEVVAPLEPRHKIELCDKISDIQRRA------FGLVSEPTGE------LVNIPKSTQ---DAGHGIPTPKCSHQVRGDEVSIAMIATSMGVSVRGRAGLVGRKLKELYADRYGTDAANGIPKRNTIYAGRPYLENMYFARDKDLVERAIRLV 1413
            M+S++++ +TG+VGV +LI   +P+LH  SVL+ V+  L  S G  M    +NG+  + A++D+C  IL+ M G  W  WR ++G +FK +L + V  + SS   E    P    EE  E KA  L+KA R ++IEGSVR+DE +G  S IDVI +L PGAS + +A +L R+LE E A      G  +        +A RI+ I+ING G  TPVSDA T +EIIWLLPA AAR FR+QSA+ I RVLGGD SLC EIE+RC+ L  T +G+++Q+        Q  +KK +  PE  E AT ++ + YV   V           V TE+ +    K   E V     R +IE  D+I D QRRA       G  +   G+      L+  P       + G  I T K S  VRG E SI + A  +G+S   RAG VG+  K LY  +YG +A   IP R+T + G+P++E  YF+RD DL+++AIR+V
Sbjct:   24 MDSIMIDATTGVVGVKTLIWHIMPELHSSSVLKGVHRALEGS-GASMDRTLINGRFTKTATVDLCCDILDKMSGASWQQWRQSSGPAFKNALRERVASVVSSGQVEQAHPPVQQAEEGVEKKAVVLRKALRAMNIEGSVRVDENTGMLSDIDVINMLCPGASPEDAAHMLTRVLEKEAAGGANNHGPTV---HGPVALADRIKRIKINGKGNPTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEDGRAYQSVMTG----QAPTKKHKSLPEWFEYATSDQKSAYVAAKVKKSV-------VVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPGDVGDSSTLIATPFDNSIDPETGKLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRDIPTRHTTFRGKPFVERTYFSRDADLIQQAIRIV 500          
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Match: Q8QN80_ESV1K (EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN80_ESV1K)

HSP 1 Score: 316 bits (809), Expect = 3.620e-99
Identity = 196/498 (39.36%), Postives = 280/498 (56.22%), Query Frame = 1
Query:    1 MESLVVEPSTGLVGVSSLIKAAVPDLHPGSVLRSVNNVLNKSDGFEMTTKTVNGKIRRMASLDVCNYILENMPGHRWTVWRTANGESFKESLAQTVEQIRSSA--------IKEVVEVPEEVKETKAKTLKKAFRTLDIEGSVRIDEASGKASVIDVIRVLSPGASVQYSAQLLIRLLENEDATDIGGVCILQTENADC----IAARIQYIQINGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLCGEIEERCSHLSTTPEGKSFQNFTVDSDSVQPVSKKTRFGPEIMELATEEEYAKYVRTVVSSIAMEEHVKKVKTEVSLIMALKGAFEVVAPLEPRHKIELCDKISDIQRRAF---GLVSEP---------TGELVNIPKSTQ---DAGHGIPTPKCSHQVRGDEVSIAMIATSMGVSVRGRAGLVGRKLKELYADRYGTDAANGIPKRNTIYAGRPYLENMYFARDKDLVERAIRLV 1413
            M+S+ ++ +TG+VGV +LI   +P LH  SVL+ V+  L  S G  M T  +NG++ + A++ +C  IL+NM G +W  WR ++G +FK++L + V  + SS         +++  E   E  ETKA  L+K+ R ++IEGSVR+DE SG  S IDVI++L P  +  Y+   L R+LE +           + ++ D     +A R+ Y++ING G  TPVSDA T +EIIWLLPA AAR FR+QSA+ I RVLGGD SLC EIE+RC+ L  T EG+++Q+        +   KK +  PE  E AT ++ + YV   V           V TE+ +    K   E V     R +IE  D+I D QRRA     L+  P         +  L+  P       + G  I T K S  VRG E SI + A  +G+S   RAG VG+  K LY +RYG +A   IP R+T + G+P++E  YF+RD DL++RAIR+V
Sbjct:   24 MDSITIDATTGVVGVKTLIWHIMPQLHTSSVLKGVHRALQDS-GASMDTTLINGRLTKTATVGLCCSILDNMRGTKWDQWRQSSGPAFKDALREHVASVVSSGQVEQAHPPVQQADEQHVEGVETKAVVLRKSLRAMNIEGSVRVDERSGMVSDIDVIKMLCPEKNDDYAKIALKRILERQQQ---------EADHNDSDSAPLADRVHYLKINGVGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEEGRAYQSVMTG----EAPPKKHKSLPEWFEYATSDQKSAYVAAKVKKSV-------VVTEIEMHEICKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPAVVGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAARLGISTGERAGQVGKVAKRLYGERYGEEANRDIPTRHTTFRGKPFVERTYFSRDADLIQRAIRIV 500          
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 1.810e-93
Identity = 191/486 (39.30%), Postives = 277/486 (57.00%), Query Frame = 1
Query:    1 MESLVVEPSTGLVGVSSLIKAAVPDLHPGSVLRSVNNVLNKSDGFEMTTKTVNGKIRRMASLDVCNYILENMPGHRWTVWRTANGESFKESLAQTVEQIRSSAIKEVVEV--------PEEVKETKAKTLKKAFRTLDIEGSVRIDEASGKASVIDVIRVLSPGASVQYSAQLLIRLLENEDATDIGGVCILQTENADCIAARIQYIQINGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLCGEIEERCSHLSTTPEGKSFQNFTVDSDSVQPVSKKTRFGPEIMELATEEEYAKYVRTVVSSIAMEEHVKKVKTEVSLIMALKGAFEV-------VAPLEPRHKIELCDKISDIQRRAF----------GLVSEPTGELVNIP-KSTQDAGHG--IPTPKCSHQVRGDEVSIAMIATSMGVSVRGRAGLVGRKLKELYADRYGTDAANGIPKRNTIYAGRPYLENMYFA 1374
            + ++V++ S+G V V S+IK  +P+L    +L++V+ VL   +G +M+T+ +NG++   A+L++C  IL+ M G  W  WR+ +G +FK +L + VE +RS++  E +          P++V   K   L+ A R+++I GSVRID+  GKAS+ID +R++SP AS +Y+AQ+  R+L+ E   D G   +   +    IA R+ YI+ING G+ TPVSDAKTIVEIIWLLP+ AA+ FRRQSAE ICRVLGGD SLCGEIE+RC+ L +T EG+++Q+F  D     P  K+    P   E AT EE   Y       I++E    KV  + +L++     FE        V   + R +IE  D+I D+QRRA            + + P    V +P   T D   G  I TPKCS  VRG E SI + A  MG+ V  +AG VG+                 + KR T + G+P+ EN Y+A
Sbjct:    5 INNIVIDASSGDVAVKSMIKNIMPNLSESGILKTVHRVLGDCNGPKMSTRLMNGRLACAATLELCFEILDTMTGPPWRKWRSESGNAFKGALRERVESVRSASQTEQLXXXXXXXXXXPQQVG-IKTAVLQNALRSINIHGSVRIDDGLGKASIIDTVRLISPTASPEYAAQMFTRVLQKERG-DCGNTSVRDEQTPTPIADRVDYIRINGRGKVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFMTDQG---PAKKQRAAMPARFEYATAEEKRAY-------ISIEATTSKVLAKKALVLRYIDVFETCKEKLKSVGQFDERAQIEFADRIKDVQRRATRVDNMITAAPAVDTSPVSVCVAMPVDDTIDTETGLLIETPKCSPSVRGPETSICVEAGKMGIGVGEKAGQVGK-----------------VVKRLTTFRGKPFSENTYYA 461          
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 9.570e-55
Identity = 114/278 (41.01%), Postives = 172/278 (61.87%), Query Frame = 1
Query:    1 MESLVVEPSTGLVGVSSLIKAAVPDLHPGSVLRSVNNVLNKSDGFEMTTKTVNGKIRRMASLDVCNYILENMPGHRWTVWRTANGESFKESLAQTVEQIRSSAIKEVVEVPEEVKE--------TKAKTLKKAFRTLDIEGSVRIDEASGKASVIDVIRVLSPGASVQYSAQLLIRLLENEDATDIGGVCILQTENADCIAARIQYIQINGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLCGEIEERCSHLSTTPEGKSFQ 810
            M++++++ +TG+VGV +LI   +P LH  SVL+ V+  L  S G  M T  +NG+  + A++D+C  IL+ M G++W  WR ++G  FK +L + V  + SS   E    P +  E        TKA  L+KA R ++I+GSVR+DE SG+ S IDVI++L  GAS +Y+AQ+L R+LE +D                 I +R+ YI+I+G+G  +PV+D  T+VEIIW+LP  ++R FRR+SAE ICRV+GGD SLC +IE+     +    G++ Q
Sbjct:    1 MDTIMIDATTGVVGVKTLIWHIMPQLHSSSVLKGVHRALEDS-GASMDTTLINGRFTKTATVDLCCSILDRMKGNQWDQWRQSSGLVFKRALRERVASVVSSGQVEQAHPPVQQAEEQHVEGVGTKAVALRKALRAMNIQGSVRVDERSGRVSGIDVIKMLCTGASSEYAAQMLKRVLERDD-------------REPSIKSRVSYIKIDGSGNKSPVTDFNTLVEIIWMLPTGSSREFRRKSAETICRVMGGDLSLCRQIEQNALGWNCVEGGEAIQ 264          
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Match: A0A835Z1W0_9STRA (Uncharacterized protein n=8 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1W0_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.060e-52
Identity = 130/347 (37.46%), Postives = 190/347 (54.76%), Query Frame = 1
Query:  388 DIEGSVRIDEASGKASVIDVIRVLSPGASVQYSAQLLIRL-LENEDATDIGGVCILQTENADCIAARIQYIQINGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLCGEIEERCSHLSTTPEGKSFQNFTVDSDSVQPVSKKTRFGPEIMELATEEEYAKYVRTVVSSIAMEEHVKKVKTEVSLIMAL-KGAFEVVAPL---EPRHKIELCDKISDIQRRAFGLVSEPTGELVNI-PKSTQDAGHGIPTPKCSHQVRGDEVSIAMIATSMGVSVR-GRAGLVGRKLKELYADRYGTDAANGIPKRNTIYAGRPYLENMYFARDKDLVERAIR 1407
            DI  ++RID ASG  SV+DVIR+++P      ++    RL LE  D                 +A+  + ++ING G+ TP +DA+T+VEI+W LP   AR+FRR SA  +CRVLGGD SL  EIE RC  L  T  G++ Q+F +   SVQ VS++    P  ++LAT E+   +V    +S   E  +  +  E +  +AL K  F+++      + R +I       D+ RR     +   G L+   P S  D     P  + +H  RG E+S+  +A  MGV ++ G   L+G+K+K LYA +YGT AA  IPKRN  + G+ + EN Y+ RD+DL+E AIR
Sbjct:    5 DIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLALELPD-----------------VASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVNEIEGRCRALQATEVGRAAQDFLIGDGSVQ-VSREL---PAELQLATPEQRTLFV----ASWMHERRLALIDREKTQQLALIKNGFDLLGSFGVADARDRIAF----GDLVRRVVQPPAHDAGALIVARPMSEDDPSVATPLAQVAH--RGPEISMHSVAAEMGVRIKAGTECLIGKKVKALYAIKYGTAAAAAIPKRNVPFRGKVFAENTYWKRDQDLMEEAIR 320          
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Match: B5LWM4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM4_9PHYC)

HSP 1 Score: 187 bits (475), Expect = 3.020e-51
Identity = 128/356 (35.96%), Postives = 183/356 (51.40%), Query Frame = 1
Query:  400 SVRIDEASGKASVIDVIRVLSPGASVQYSAQLLIRLLENEDATDIGGVCILQTENADCIAARIQYIQINGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLCGEIEERCSHLSTTPEGKSFQNFTVDSDSV---QPVS-KKTRFG--PEIMELATEEEYAKYVRTVVSSIAMEEHVKKVKTEVSLIMALKGAFEVVAPLEPRHKIELCDKISDIQRRAFG----LVSEPTGELVNIPK------STQDAGHGIP--TPKCSHQVRGDEVSIAMIATSMGVSVRGRAGLVGRKLKELYADRYGTDAANGIPKRNTIYAGRPYLENMYFARDKDLVERAIRLV 1413
            ++R+D+ +   SVID IR++    S   +  L              G  +L       +  +   +++NG G+ TPV+DAKT++EI+WLLP   A +FR Q    ICR+LGGD SL  EIE R + L+ T EG++ Q F ++ + V   QP   K+ R G  P   + AT EE   +  T+V+   + E       EV +    K   E V     R  IE  D++ D QRRA      + S P  + V I         T D+  G+P  TP+CS  VRG E SI   A  +G+ V  + G +G++L   Y  RYG +A   IPKR T Y G+P+ EN Y++RD DLV+ AIR+V
Sbjct:   29 TIRVDKNTKLGSVIDTIRMVLECDSSNANTSL--------------GRLVLSHPG---LGEKYTQLKVNGRGKPTPVADAKTLIEIVWLLPGRRAHAFRCQRVGKICRLLGGDTSLVSEIEARHATLTGTEEGRATQEFFLNDNHVTIDQPDQVKELRSGEEPSWFKNATAEEKRAFASTMVNKAIVSE-------EVEMYDFCKAKLESVGQFTTRDMIEFGDRVRDAQRRALRAGNMMTSTPVDDTVVISAVARPVDDTIDSATGLPLATPECSESVRGVETSICNEAAKLGICVGEKGGEIGKELIRRYTKRYGVEAGLNIPKRPTTYRGKPFNENCYWSRDADLVQEAIRIV 360          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5516.13802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG13_9PHAE1.590e-14751.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q8QN79_ESV1K4.740e-11542.19EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K[more]
B5LW93_9PHYC4.050e-10341.39Uncharacterized protein n=1 Tax=Feldmannia species... [more]
A0A6H5K200_9PHAE9.450e-10138.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPL9_ECTSI4.590e-10040.65EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QN80_ESV1K3.620e-9939.36EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5L5N7_9PHAE1.810e-9339.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJP2_9PHAE9.570e-5541.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1W0_9STRA1.060e-5237.46Uncharacterized protein n=8 Tax=Tribonema minus Ta... [more]
B5LWM4_9PHYC3.020e-5135.96Uncharacterized protein n=1 Tax=Feldmannia species... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5516contigL-elsbetiae_contig5516:2704..4116 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.4
Seed ortholog evalue1.1e-83
Seed eggNOG ortholog2880.D8LPL9
Hectar predicted targeting categoryother localisation
EggNOG OGs2EUDG@1,2SWJG@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1413
Cds size1413
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816580.9709198-CDS-L-elsbetiae_contig5516:2703..41161622816580.9709198-CDS-L-elsbetiae_contig5516:2703..4116Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5516 2704..4116 -
1691683662.0835965-CDS-L-elsbetiae_contig5516:2703..41161691683662.0835965-CDS-L-elsbetiae_contig5516:2703..4116Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5516 2704..4116 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5516.13802.1prot_L-elsbetiae_contig5516.13802.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5516 2704..4116 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5516.13802.1

>prot_L-elsbetiae_contig5516.13802.1 ID=prot_L-elsbetiae_contig5516.13802.1|Name=mRNA_L-elsbetiae_contig5516.13802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=471bp
MESLVVEPSTGLVGVSSLIKAAVPDLHPGSVLRSVNNVLNKSDGFEMTTK
TVNGKIRRMASLDVCNYILENMPGHRWTVWRTANGESFKESLAQTVEQIR
SSAIKEVVEVPEEVKETKAKTLKKAFRTLDIEGSVRIDEASGKASVIDVI
RVLSPGASVQYSAQLLIRLLENEDATDIGGVCILQTENADCIAARIQYIQ
INGAGRSTPVSDAKTIVEIIWLLPASAARSFRRQSAEVICRVLGGDASLC
GEIEERCSHLSTTPEGKSFQNFTVDSDSVQPVSKKTRFGPEIMELATEEE
YAKYVRTVVSSIAMEEHVKKVKTEVSLIMALKGAFEVVAPLEPRHKIELC
DKISDIQRRAFGLVSEPTGELVNIPKSTQDAGHGIPTPKCSHQVRGDEVS
IAMIATSMGVSVRGRAGLVGRKLKELYADRYGTDAANGIPKRNTIYAGRP
YLENMYFARDKDLVERAIRLV
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mRNA from alignment at L-elsbetiae_contig5516:2704..4116-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5516.13802.1 ID=mRNA_L-elsbetiae_contig5516.13802.1|Name=mRNA_L-elsbetiae_contig5516.13802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1413bp|location=Sequence derived from alignment at L-elsbetiae_contig5516:2704..4116- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAATCCCTCGTCGTTGAGCCCTCGACGGGCTTGGTGGGTGTCTCCAG TCTCATCAAGGCAGCCGTGCCAGACCTCCACCCCGGATCCGTACTCCGAT CTGTCAATAACGTCCTCAATAAATCCGATGGGTTCGAGATGACCACTAAA ACGGTAAATGGAAAAATCAGAAGGATGGCTTCGTTGGACGTCTGCAACTA TATACTCGAAAATATGCCGGGTCACCGGTGGACCGTCTGGCGCACCGCTA ACGGGGAATCCTTCAAGGAATCTCTAGCACAGACAGTTGAACAAATACGG TCGTCGGCAATCAAAGAAGTTGTTGAAGTCCCGGAGGAGGTCAAGGAAAC GAAGGCTAAGACTCTCAAGAAAGCATTCCGCACTCTCGATATCGAAGGGT CCGTGCGGATTGATGAGGCGTCCGGAAAAGCATCTGTCATCGATGTCATC CGCGTACTGTCACCCGGGGCTTCGGTACAGTACTCAGCCCAGTTACTGAT TCGCCTCCTAGAAAACGAAGATGCAACTGACATTGGAGGTGTTTGCATAT TGCAAACAGAAAATGCCGATTGCATCGCCGCTCGCATACAATACATCCAG ATCAATGGGGCAGGCAGGAGCACACCCGTAAGCGACGCCAAAACGATCGT CGAAATCATCTGGCTTCTCCCTGCGAGCGCGGCGCGTTCATTCCGTCGTC AGTCGGCCGAAGTCATATGTCGCGTGCTTGGAGGGGACGCGAGTCTGTGT GGGGAAATTGAAGAGAGATGCTCCCACCTATCTACAACTCCCGAGGGGAA GTCTTTCCAGAACTTTACGGTGGATTCAGATTCAGTGCAACCGGTGTCCA AGAAGACTAGATTTGGTCCCGAGATTATGGAGTTGGCCACCGAAGAGGAG TACGCGAAGTACGTGAGGACGGTCGTTTCGAGCATAGCAATGGAGGAACA CGTTAAAAAAGTGAAGACCGAGGTTTCCTTGATTATGGCGCTAAAGGGTG CATTCGAAGTCGTAGCGCCCCTCGAACCACGCCACAAGATTGAACTTTGC GACAAGATTTCAGACATTCAGCGCCGAGCATTTGGTCTCGTATCCGAACC TACGGGTGAACTTGTAAACATCCCAAAATCCACCCAAGACGCTGGACACG GCATCCCTACTCCAAAGTGTTCTCACCAAGTGCGCGGAGACGAGGTCTCT ATTGCCATGATTGCCACTTCAATGGGGGTAAGTGTGAGAGGGCGCGCAGG TCTAGTTGGCAGGAAGCTAAAAGAGCTCTACGCGGATCGCTACGGGACGG ACGCGGCGAATGGCATCCCAAAGCGAAACACGATCTACGCGGGTCGCCCC TACCTAGAAAACATGTACTTTGCAAGGGACAAGGACCTTGTGGAGCGCGC AATCCGTCTCGTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5516:2704..4116-

>mRNA_L-elsbetiae_contig5516.13802.1 ID=mRNA_L-elsbetiae_contig5516.13802.1|Name=mRNA_L-elsbetiae_contig5516.13802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2826bp|location=Sequence derived from alignment at L-elsbetiae_contig5516:2704..4116- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAATCCCTCGTCGTTGAGCCCTCGACGGGCTTGGTGGGTGTCTCCAG
TCTCATCAAGGCAGCCGTGCCAGACCTCCACCCCGGATCCGTACTCCGAT
CTGTCAATAACGTCCTCAATAAATCCGATGGGTTCGAGATGACCACTAAA
ACGGTAAATGGAAAAATCAGAAGGATGGCTTCGTTGGACGTCTGCAACTA
TATACTCGAAAATATGCCGGGTCACCGGTGGACCGTCTGGCGCACCGCTA
ACGGGGAATCCTTCAAGGAATCTCTAGCACAGACAGTTGAACAAATACGG
TCGTCGGCAATCAAAGAAGTTGTTGAAGTCCCGGAGGAGGTCAAGGAAAC
GAAGGCTAAGACTCTCAAGAAAGCATTCCGCACTCTCGATATCGAAGGGT
CCGTGCGGATTGATGAGGCGTCCGGAAAAGCATCTGTCATCGATGTCATC
CGCGTACTGTCACCCGGGGCTTCGGTACAGTACTCAGCCCAGTTACTGAT
TCGCCTCCTAGAAAACGAAGATGCAACTGACATTGGAGGTGTTTGCATAT
TGCAAACAGAAAATGCCGATTGCATCGCCGCTCGCATACAATACATCCAG
ATCAATGGGGCAGGCAGGAGCACACCCGTAAGCGACGCCAAAACGATCGT
CGAAATCATCTGGCTTCTCCCTGCGAGCGCGGCGCGTTCATTCCGTCGTC
AGTCGGCCGAAGTCATATGTCGCGTGCTTGGAGGGGACGCGAGTCTGTGT
GGGGAAATTGAAGAGAGATGCTCCCACCTATCTACAACTCCCGAGGGGAA
GTCTTTCCAGAACTTTACGGTGGATTCAGATTCAGTGCAACCGGTGTCCA
AGAAGACTAGATTTGGTCCCGAGATTATGGAGTTGGCCACCGAAGAGGAG
TACGCGAAGTACGTGAGGACGGTCGTTTCGAGCATAGCAATGGAGGAACA
CGTTAAAAAAGTGAAGACCGAGGTTTCCTTGATTATGGCGCTAAAGGGTG
CATTCGAAGTCGTAGCGCCCCTCGAACCACGCCACAAGATTGAACTTTGC
GACAAGATTTCAGACATTCAGCGCCGAGCATTTGGTCTCGTATCCGAACC
TACGGGTGAACTTGTAAACATCCCAAAATCCACCCAAGACGCTGGACACG
GCATCCCTACTCCAAAGTGTTCTCACCAAGTGCGCGGAGACGAGGTCTCT
ATTGCCATGATTGCCACTTCAATGGGGGTAAGTGTGAGAGGGCGCGCAGG
TCTAGTTGGCAGGAAGCTAAAAGAGCTCTACGCGGATCGCTACGGGACGG
ACGCGGCGAATGGCATCCCAAAGCGAAACACGATCTACGCGGGTCGCCCC
TACCTAGAAAACATGTACTTTGCAAGGGACAAGGACCTTGTGGAGCGCGC
AATCCGTCTCGTTATGGAATCCCTCGTCGTTGAGCCCTCGACGGGCTTGG
TGGGTGTCTCCAGTCTCATCAAGGCAGCCGTGCCAGACCTCCACCCCGGA
TCCGTACTCCGATCTGTCAATAACGTCCTCAATAAATCCGATGGGTTCGA
GATGACCACTAAAACGGTAAATGGAAAAATCAGAAGGATGGCTTCGTTGG
ACGTCTGCAACTATATACTCGAAAATATGCCGGGTCACCGGTGGACCGTC
TGGCGCACCGCTAACGGGGAATCCTTCAAGGAATCTCTAGCACAGACAGT
TGAACAAATACGGTCGTCGGCAATCAAAGAAGTTGTTGAAGTCCCGGAGG
AGGTCAAGGAAACGAAGGCTAAGACTCTCAAGAAAGCATTCCGCACTCTC
GATATCGAAGGGTCCGTGCGGATTGATGAGGCGTCCGGAAAAGCATCTGT
CATCGATGTCATCCGCGTACTGTCACCCGGGGCTTCGGTACAGTACTCAG
CCCAGTTACTGATTCGCCTCCTAGAAAACGAAGATGCAACTGACATTGGA
GGTGTTTGCATATTGCAAACAGAAAATGCCGATTGCATCGCCGCTCGCAT
ACAATACATCCAGATCAATGGGGCAGGCAGGAGCACACCCGTAAGCGACG
CCAAAACGATCGTCGAAATCATCTGGCTTCTCCCTGCGAGCGCGGCGCGT
TCATTCCGTCGTCAGTCGGCCGAAGTCATATGTCGCGTGCTTGGAGGGGA
CGCGAGTCTGTGTGGGGAAATTGAAGAGAGATGCTCCCACCTATCTACAA
CTCCCGAGGGGAAGTCTTTCCAGAACTTTACGGTGGATTCAGATTCAGTG
CAACCGGTGTCCAAGAAGACTAGATTTGGTCCCGAGATTATGGAGTTGGC
CACCGAAGAGGAGTACGCGAAGTACGTGAGGACGGTCGTTTCGAGCATAG
CAATGGAGGAACACGTTAAAAAAGTGAAGACCGAGGTTTCCTTGATTATG
GCGCTAAAGGGTGCATTCGAAGTCGTAGCGCCCCTCGAACCACGCCACAA
GATTGAACTTTGCGACAAGATTTCAGACATTCAGCGCCGAGCATTTGGTC
TCGTATCCGAACCTACGGGTGAACTTGTAAACATCCCAAAATCCACCCAA
GACGCTGGACACGGCATCCCTACTCCAAAGTGTTCTCACCAAGTGCGCGG
AGACGAGGTCTCTATTGCCATGATTGCCACTTCAATGGGGGTAAGTGTGA
GAGGGCGCGCAGGTCTAGTTGGCAGGAAGCTAAAAGAGCTCTACGCGGAT
CGCTACGGGACGGACGCGGCGAATGGCATCCCAAAGCGAAACACGATCTA
CGCGGGTCGCCCCTACCTAGAAAACATGTACTTTGCAAGGGACAAGGACC
TTGTGGAGCGCGCAATCCGTCTCGTT
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