mRNA_L-elsbetiae_contig5510.13792.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5510.13792.1
Unique NamemRNA_L-elsbetiae_contig5510.13792.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Match: D8LBI0_ECTSI (Phosphoribulokinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI0_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 2.050e-168
Identity = 244/259 (94.21%), Postives = 249/259 (96.14%), Query Frame = 1 
Query:    1 MIKTCAILAVTAGAATASPWAGQASKSAAFVGAPVGRSAPWGLGTRWAQSTPTSTTARVGTVSRSAGARLDALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDSVGPLGGGFDKGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 777
            M+KTCA LAV AG AT SPWAGQASKSAAFVGAPVGRSAPWGLGTRWA STPTST AR GT+SRSA ARL+ALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGD+VGPLGGGFD GGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLD PEEIKPTPIVIIEGLHPFVD+RVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE
Sbjct:    1 MMKTCAFLAVAAGVATGSPWAGQASKSAAFVGAPVGRSAPWGLGTRWASSTPTSTKARPGTMSRSARARLEALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDKRVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 259
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BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Match: Q9ATC3_VAULI (Phosphoribulokinase n=3 Tax=Eukaryota TaxID=2759 RepID=Q9ATC3_VAULI)

HSP 1 Score: 345 bits (886), Expect = 2.090e-115
Identity = 171/195 (87.69%), Postives = 182/195 (93.33%), Query Frame = 1 
Query:  196 AGARLDALSMKLGE-DEKVVLIGVAADSGCGKSTFMRRLTSIFGGDSVGPLGGGFDKGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 777
            A ++L AL MKLG+ DE VV+IGVAADSGCGKSTFMRRLT+IFGG SVGPLGGGF  GGWETN+LVSDLTTV+CLDDYHLNDR GRKVSGRTALHT+EQKFDLM EQL+ LK G+SVMKPIYNHVNGTLD PEE+KPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE
Sbjct:   42 AASKLQALEMKLGDPDEPVVIIGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGNGGWETNTLVSDLTTVICLDDYHLNDRNGRKVSGRTALHTDEQKFDLMTEQLSALKRGESVMKPIYNHVNGTLDTPEEVKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 236
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BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Match: A0A836CLK3_9STRA (Phosphoribulokinase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK3_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.250e-110
Identity = 168/199 (84.42%), Postives = 180/199 (90.45%), Query Frame = 1 
Query:  187 SRSAGARLDALSMKLGE-DEKVVLIGVAADSGCGKSTFMRRLTSIFGGDSVGPLGGGFDK-GGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 777
            S  A AR  AL MKLG+ DE +V+IGVAADSGCGKSTFMRRLT+IFGG +VGPLGGGF   GGWETN+LVSDLTTV+CLDDYHLNDRGGRKVSGRTALHT EQ+FDLM EQL  LK G SV KPIYNHVNGTLD+PEEIKPTPI+IIEGLHPFVD+RVRDLLDFTIYLDISDEIKFAWKIQRDM+ERGHSLESIQASIE
Sbjct:   42 SSKAAARWQALQMKLGDADEPIVVIGVAADSGCGKSTFMRRLTNIFGGSTVGPLGGGFGAPGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMAEQLAALKRGDSVKKPIYNHVNGTLDEPEEIKPTPIIIIEGLHPFVDQRVRDLLDFTIYLDISDEIKFAWKIQRDMLERGHSLESIQASIE 240
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BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Match: A0A7S2JQY6_9STRA (Phosphoribulokinase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JQY6_9STRA)

HSP 1 Score: 311 bits (797), Expect = 5.580e-104
Identity = 152/187 (81.28%), Postives = 164/187 (87.70%), Query Frame = 1 
Query:  217 LSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDSVGPLGGGFDKGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 777
            L M L E EK +LIGVAADSGCGKSTFMRRLT+IFGG+ VGPLGGGFD GGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSG TAL+  E  FDLM+EQ+ DLK GKS+ KPIYNHVNGTLD PE I+PTPI+IIEGLHP  DERVRDLLDF++YLDISDE+K  WKIQRDM ERGHSLESI ASIE
Sbjct:   35 LQMALKEGEKPILIGVAADSGCGKSTFMRRLTNIFGGERVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGLTALNPLENNFDLMFEQMKDLKAGKSISKPIYNHVNGTLDTPETIEPTPIIIIEGLHPMHDERVRDLLDFSLYLDISDEVKLNWKIQRDMEERGHSLESILASIE 221
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BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Match: A0A7S2Y062_9STRA (Phosphoribulokinase n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S2Y062_9STRA)

HSP 1 Score: 311 bits (797), Expect = 9.590e-102
Identity = 153/199 (76.88%), Postives = 174/199 (87.44%), Query Frame = 1 
Query:  184 VSRSAGARLDALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDSVGPLGGGFD-KGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 777
            VS+  G+RL     KL + E+VVLIGVAADSGCGKSTFMRRLT++FGG +VGPLGGGF  +GGWETN+LVSD TTV+CLDDYHLNDR GRKVSG TAL+T E  FDLMYEQL +LK+GK++ KPIYNHVNGTLD PE I+PTPIVIIEGLHP  DERVR+LLDF++YLDISD++KFAWKIQRDM ERGHSLESIQASIE
Sbjct:   46 VSKRTGSRLQNFVAKLADGEQVVLIGVAADSGCGKSTFMRRLTNVFGGTNVGPLGGGFGAEGGWETNTLVSDTTTVICLDDYHLNDRNGRKVSGLTALNTLENNFDLMYEQLKELKSGKTISKPIYNHVNGTLDTPETIEPTPIVIIEGLHPMHDERVRELLDFSMYLDISDDVKFAWKIQRDMEERGHSLESIQASIE 244
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BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Match: Q95033_TRICV (Phosphoribulokinase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=Q95033_TRICV)

HSP 1 Score: 309 bits (791), Expect = 3.790e-101
Identity = 155/199 (77.89%), Postives = 168/199 (84.42%), Query Frame = 1 
Query:  181 TVSRSAGARLDALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDSVGPLGGGFDKGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 777
            T+  +A A   AL+M L E EK ++IGVAADSGCGKSTFMRRLTSIFGG+ VGPLGGGFD GGWETNSLVSDLTTVLCLDDYHLNDR GRKV+ RTAL   E  FDLMYEQ+  LKNG+S+ KPIYNHVNGTLD PE I PTPIVIIEGLHP  DERVRDLLDF++YLDISDE+K  WKIQRDM ERGHSLESI ASIE
Sbjct:   28 TLRAAAPASPSALNMALKEGEKPIVIGVAADSGCGKSTFMRRLTSIFGGEGVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRNGRKVTQRTALDPLENNFDLMYEQIAALKNGESIEKPIYNHVNGTLDTPETIVPTPIVIIEGLHPMYDERVRDLLDFSLYLDISDEVKLNWKIQRDMEERGHSLESILASIE 226
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BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Match: A0A4D9D820_9STRA (Phosphoribulokinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D820_9STRA)

HSP 1 Score: 309 bits (791), Expect = 5.020e-101
Identity = 147/187 (78.61%), Postives = 164/187 (87.70%), Query Frame = 1 
Query:  217 LSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDSVGPLGGGFDKGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 777
            L MKLG D+KV+LIGVAADSGCGKSTFMRRLT+IFGG +VGPLGGGFD GGWETN+LVSD TTV+CLDDYH NDR GRKV+GRTAL   EQ FDLMYEQL  LK GK+V KPIYNHVNGTLD+PEE+ PTPIVI+EGLHP+ D RV+DLLD+TIYLDISDEIK AWKIQRDM ERG +LE ++A IE
Sbjct:   45 LMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIE 231
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BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Match: F8LSX2_LEPCH (Phosphoribulokinase (Fragment) n=1 Tax=Lepidodinium chlorophorum TaxID=107758 RepID=F8LSX2_LEPCH)

HSP 1 Score: 308 bits (789), Expect = 7.370e-101
Identity = 147/183 (80.33%), Postives = 167/183 (91.26%), Query Frame = 1 
Query:  229 LGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDSVGPLGGGFDKGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 777
            LG+DE VV+IGVAADSGCGKSTFMRRLT++FGG+ VGPLGGGF  GGWETN+LVSD TTV+CLDDYHL+DR GRKVS RTAL T EQKFDLMYEQ+  LK G+++ KPIYNHVNGTLD+PE IKPTPIVIIEGLHPFVDERVR L+DF+IYLDI+D++KFAWKI+RDM ERGHSLESI+ASIE
Sbjct:  112 LGKDEPVVVIGVAADSGCGKSTFMRRLTNVFGGEQVGPLGGGFGGGGWETNTLVSDQTTVICLDDYHLDDRQGRKVSKRTALDTAEQKFDLMYEQIAALKRGETIKKPIYNHVNGTLDEPETIKPTPIVIIEGLHPFVDERVRKLIDFSIYLDITDDVKFAWKIRRDMQERGHSLESIKASIE 294
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BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Match: W7TMN7_9STRA (Phosphoribulokinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMN7_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.020e-100
Identity = 147/187 (78.61%), Postives = 164/187 (87.70%), Query Frame = 1 
Query:  217 LSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDSVGPLGGGFDKGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 777
            L MKLG D+KV+LIGVAADSGCGKSTFMRRLT+IFGG +VGPLGGGFD GGWETN+LVSD TTV+CLDDYH NDR GRKV+GRTAL   EQ FDLMYEQL  LK GK+V KPIYNHVNGTLD+PEE+ PTPIVI+EGLHP+ D RV+DLLD+TIYLDISDEIK AWKIQRDM ERG +LE ++A IE
Sbjct:   45 LMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIE 231
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BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Match: A0A7S3ZKD2_9STRA (Phosphoribulokinase n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKD2_9STRA)

HSP 1 Score: 303 bits (777), Expect = 4.820e-99
Identity = 149/200 (74.50%), Postives = 167/200 (83.50%), Query Frame = 1 
Query:  181 TVSRSAGARLDALS-MKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDSVGPLGGGFDKGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIE 777
            T  +S   R +A S M +  D  VVLIGVAADSGCGKSTFMRRLT IFGG +VGPLGGGFD GGWETN+LVSD TTV+CLDDYHLNDRGGRKV+GRTAL   E  FDLMYEQL +LK G ++ KPIYNHVNGTLD PEEI PT IVI+EGLHP  D RVR+LLDF++YLDI+D++KFAWKIQRDM+ERGHSLESIQ SIE
Sbjct:   20 TALKSTNVRANARSEMTMAADGGVVLIGVAADSGCGKSTFMRRLTGIFGGTNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHLNDRGGRKVTGRTALDLAENNFDLMYEQLKELKAGNAIKKPIYNHVNGTLDTPEEITPTQIVIVEGLHPMADPRVRELLDFSLYLDITDDVKFAWKIQRDMVERGHSLESIQQSIE 219
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5510.13792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBI0_ECTSI2.050e-16894.21Phosphoribulokinase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
Q9ATC3_VAULI2.090e-11587.69Phosphoribulokinase n=3 Tax=Eukaryota TaxID=2759 R... [more]
A0A836CLK3_9STRA1.250e-11084.42Phosphoribulokinase n=2 Tax=Tribonema minus TaxID=... [more]
A0A7S2JQY6_9STRA5.580e-10481.28Phosphoribulokinase (Fragment) n=1 Tax=Leptocylind... [more]
A0A7S2Y062_9STRA9.590e-10276.88Phosphoribulokinase n=2 Tax=Eukaryota TaxID=2759 R... [more]
Q95033_TRICV3.790e-10177.89Phosphoribulokinase n=1 Tax=Trieres chinensis TaxI... [more]
A0A4D9D820_9STRA5.020e-10178.61Phosphoribulokinase n=1 Tax=Nannochloropsis salina... [more]
F8LSX2_LEPCH7.370e-10180.33Phosphoribulokinase (Fragment) n=1 Tax=Lepidodiniu... [more]
W7TMN7_9STRA1.020e-10078.61Phosphoribulokinase n=1 Tax=Nannochloropsis gadita... [more]
A0A7S3ZKD2_9STRA4.820e-9974.50Phosphoribulokinase n=3 Tax=Pelagomonas calceolata... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5510contigL-elsbetiae_contig5510:9062..12288 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score487.3
Seed ortholog evalue4.5e-135
Seed eggNOG ortholog2880.D8LBI0
Preferred namePRK
KEGG rclassRC00002,RC00017
KEGG koko:K00855
KEGG ReactionR01523
KEGG Pathwayko00710,ko01100,ko01120,ko01200,map00710,map01100,map01120,map01200
KEGG ModuleM00165,M00166
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0004849,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0008655,GO:0008974,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0010319,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0019899,GO:0019904,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0034404,GO:0034641,GO:0034654,GO:0042221,GO:0042455,GO:0042651,GO:0042742,GO:0042802,GO:0042803,GO:0043094,GO:0043097,GO:0043174,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046983,GO:0048046,GO:0050896,GO:0051704,GO:0051707,GO:0055035,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097718,GO:0098542,GO:0099080,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
EggNOG free text desc.UMP salvage
EggNOG OGsCOG0572@1,KOG4203@2759
EC2.7.1.19
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionPhosphoribulokinase
Ec32 orthologEc-27_003910.1
Exons3
Model size777
Cds size777
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5510.13792.1prot_L-elsbetiae_contig5510.13792.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5510 9062..12288 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816580.2651284-CDS-L-elsbetiae_contig5510:9061..93071622816580.2651284-CDS-L-elsbetiae_contig5510:9061..9307Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5510 9062..9307 +
1691683661.611844-CDS-L-elsbetiae_contig5510:9061..93071691683661.611844-CDS-L-elsbetiae_contig5510:9061..9307Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5510 9062..9307 +
1622816580.2785063-CDS-L-elsbetiae_contig5510:11528..117351622816580.2785063-CDS-L-elsbetiae_contig5510:11528..11735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5510 11529..11735 +
1691683661.6245415-CDS-L-elsbetiae_contig5510:11528..117351691683661.6245415-CDS-L-elsbetiae_contig5510:11528..11735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5510 11529..11735 +
1622816580.2900977-CDS-L-elsbetiae_contig5510:11964..122881622816580.2900977-CDS-L-elsbetiae_contig5510:11964..12288Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5510 11965..12288 +
1691683661.634845-CDS-L-elsbetiae_contig5510:11964..122881691683661.634845-CDS-L-elsbetiae_contig5510:11964..12288Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5510 11965..12288 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5510.13792.1

>prot_L-elsbetiae_contig5510.13792.1 ID=prot_L-elsbetiae_contig5510.13792.1|Name=mRNA_L-elsbetiae_contig5510.13792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=259bp
MIKTCAILAVTAGAATASPWAGQASKSAAFVGAPVGRSAPWGLGTRWAQS
TPTSTTARVGTVSRSAGARLDALSMKLGEDEKVVLIGVAADSGCGKSTFM
RRLTSIFGGDSVGPLGGGFDKGGWETNSLVSDLTTVLCLDDYHLNDRGGR
KVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDKPEEIK
PTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHS
LESIQASIE
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mRNA from alignment at L-elsbetiae_contig5510:9062..12288+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5510.13792.1 ID=mRNA_L-elsbetiae_contig5510.13792.1|Name=mRNA_L-elsbetiae_contig5510.13792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3227bp|location=Sequence derived from alignment at L-elsbetiae_contig5510:9062..12288+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATCAAAACTTGCGCTATCCTCGCCGTGACGGCGGGCGCGGCAACCGC
CAGCCCGTGGGCCGGCCAGGCGTCGAAGAGCGCGGCTTTTGTGGGCGCTC
CTGTTGGGCGATCAGCCCCATGGGGATTGGGAACGCGGTGGGCGCAGAGC
ACGCCGACCTCGACCACGGCACGAGTGGGGACCGTGTCGCGATCCGCGGG
CGCTCGCCTGGACGCGTTGAGCATGAAGCTGGGCGAGGACGAGAAGGTGC
GTGTTTAGTGTGTGGATTTATCTTGTGCCGGTGGTATGTGCGAAAGCTCA
TGTATGTGTGTACTTCATCTGCTGGTTCCTGTGTGCGTTCCAAAGCAAAC
ATACGTAAGCGCTTTTTTTCGGTCCCGCCTCAACACACATCATGTTCACA
TATGGCCACGCCGGACCACGAGTGCGGGCTGAAAATCGTATCATAGCGAA
GGTAACACACAGAGACACAGCAAGGAACTGGATGTAGCTGGTAGTACGCG
TGCTACGTCAGCCAGGTGGGTTGCTGTTGTTATGCCGTGATTTGTCATGA
TCGGCTTCGGATGGGTGAGCGTTTCCCGCGGCTTGAACAAAGATAGCGTG
TAGGGGCGGGGCGGGACCGTGCTAGACGGTATCTGGATGGTGGGCCAACC
CAGGACCCCTTCGTGCGGAGCGTGGTCGTTCCTGCAACTTTATGTCCACA
TCTTTCTCTTGAGGTCGTGCCCCACGCTCCCCACCCTCGGCACTTTGTAC
TTTCAAGAAATAGCCTGTCACCTTATCTTGGACAGCAGGTCAACCCGGAG
GTTCACGTTTTAAGGGGCACTTTCTGAGGACAAAACTCCTCTCTCTGGTT
AGTTTCCGTGACGCTGTGCCCGTGCCGAGTTGCATTTGCTTCTGAAGGCC
AGTTGTAGGCAACACATTCACCTCTCGGTTGTTTCTCGTCACCCCCCCCC
TCCCGCGCACCAGAGCCCCAGTCAACGCGACCTGCAGGCGCGCGCATGCC
ATGAAACTGGCCCTACTTTCATTGTCTTCAGCGGATATGTGTCCGCTGCA
TGCGAATGCACCGTGTAGAATGTCCATGCGATTGCTGCTGATGACGAACC
CCACATCTGAGATGGAGATCACCTATAAAGTCTACACTGCGATTCTGTGT
ATCTTTGTGTACATGGGTCAATAGCAAGCGACTGCTTCCCCTTACGGCGC
ACCGCACTCCTGTGCGAGCGATGGCTAGTATATACCCCTGAACGATGAAT
GCAGCCAGTCTCGGCCACAATATTTATTTTGACCCAACGGACCACTTTTT
CAGAGGCATCGAGTGTGACAGGTACGCTACTGCCGTGTCAAGACAGAACT
CATGACAGCACGGTCTCGCTAAGAAACCGCCCAGATACTAGATGTTTGCT
AGTGTTCGAACAGGACAACCGTCCTCACAGAAATATCCAGGGCTCTCGAG
TGAGACTGGCCAGAGTTTGTGTCTGTCCCTATATAAAGGGGATAGCTCTC
ACTGTCCACAAATAGGAGGAGAGCCCTGTCCTGGTGCTTGAGAGTGCAAA
CCGTTGCGTTTGACCTCACGCACGAAGGTTACGTCGAGCACGAGCAACAT
ATGGCATTTATCGCACGTTGGAAGAGGTACCGCAGGTGGCCATCATAAAT
ATTAAATACTTCGTATATACTTCCGTCTCATATGTATTTCAAAATCACGC
TGACTCTTATCCATTTTTGATCCTGTTTGTAGGAAGAAAATCCTACACCA
GTAGCGATATTTTCAAGCCAAACCAGTGCGAACAATAATCGAAGCATCTG
CAGCCGATCGCGCACGTGACCATCCTGGAAGCAGCACGGCCGGTATTTTA
TTGTAATTTCAAATGTTGCCAGTCGACTGATGTACTCTCCTGGGTACGCA
AAGAGACACCGGGTGTGACGTCCTGTACCACCTGCGGCCGGCATACGTAT
CTGCAACGTAGGTAGCGGTTATCGCCGCGCCTGGTCGGCTCTTGTTGGGG
TCGCAAAAGTCTGGCGATACTTTCCCAAGCGTTCTCCACGAAACTCCAAA
AAACGGCGTTAATTGATTTGATCGTTTTTAGGTTGAAACGAAAAAGTAGG
AATACATGAATGAGCCTATCCAACGGGCCTGTCTGCGCAATCCCATCGAC
CGTTGTCTCGCCTCCATCGGCTGTATGGTAGTGAGGCGTGAACTAAAAGA
AGCCGATTTGGAGACGGTTCAACGTTGTATCGAAACCCTCGTGCCCCCTC
GCCCTCAGTCGCGGGCGGGTCCAGCTTTGTTTTCCGGTTAAAAGCGTGTT
GTGCACGATCTTCGTCTAACAAGTAGATCGTACCTTACCGTTCTCTCCTT
GTTTTTTGTTCTTCTACGCCCGTCGTCGTCTTCCGCCGCCAACCTACGGC
TCCTTCGGCACCTGCGTGATGATGGATGCACCCATGGACAACGCCGGCAA
TATCGCTTGCCCGCCAGGTTGTTCTCATCGGTGTCGCCGCTGACTCTGGT
TGCGGAAAGTCGACGTTCATGCGTCGGCTGACATCTATCTTCGGGGGTGA
CTCCGTGGGCCCGCTCGGGGGGGGGTTCGACAAGGGCGGCTGGGAGACGA
ACTCTCTGGTGTCTGACCTCACCACCGTCCTGTGCCTGGACGACTACCAC
CTGAACGACCGCGGCGGGCGCAAGGTGTGTACACATCATGGGCATTTTTG
TTCGGAGAGCGTCAAGTCTTTCGTGCTACGCAACGTTACATGCCCTTGTG
CGAGCTGTCAAAACGGTGGTCCCCGCGACAGCTGTGTCACTTCCCATCGT
TTGCGTGATTTTGCGAGAAATAGGCATCTACGTATCTACCACATTAGGTA
CCACAGCTTTTCAACCCTAACCCTTAGATTTATGACTTTTTTTTGTTCAC
CAGGTGTCGGGCAGGACCGCGCTCCACACCGAGGAGCAAAAGTTTGACCT
CATGTACGAGCAGCTCAACGACCTCAAGAACGGCAAGAGCGTGATGAAGC
CCATCTACAACCACGTCAACGGGACCCTGGACAAGCCCGAGGAGATCAAG
CCCACCCCCATCGTCATCATCGAGGGGCTCCACCCCTTCGTGGACGAGCG
CGTGCGCGACCTGCTGGACTTCACCATCTACCTGGACATCTCGGACGAGA
TCAAGTTCGCGTGGAAGATCCAGAGGGACATGATGGAGCGCGGACACTCC
CTGGAGTCCATCCAGGCCTCCATCGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5510:9062..12288+

>mRNA_L-elsbetiae_contig5510.13792.1 ID=mRNA_L-elsbetiae_contig5510.13792.1|Name=mRNA_L-elsbetiae_contig5510.13792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1554bp|location=Sequence derived from alignment at L-elsbetiae_contig5510:9062..12288+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATCAAAACTTGCGCTATCCTCGCCGTGACGGCGGGCGCGGCAACCGC
CAGCCCGTGGGCCGGCCAGGCGTCGAAGAGCGCGGCTTTTGTGGGCGCTC
CTGTTGGGCGATCAGCCCCATGGGGATTGGGAACGCGGTGGGCGCAGAGC
ACGCCGACCTCGACCACGGCACGAGTGGGGACCGTGTCGCGATCCGCGGG
CGCTCGCCTGGACGCGTTGAGCATGAAGCTGGGCGAGGACGAGAAGATGA
TCAAAACTTGCGCTATCCTCGCCGTGACGGCGGGCGCGGCAACCGCCAGC
CCGTGGGCCGGCCAGGCGTCGAAGAGCGCGGCTTTTGTGGGCGCTCCTGT
TGGGCGATCAGCCCCATGGGGATTGGGAACGCGGTGGGCGCAGAGCACGC
CGACCTCGACCACGGCACGAGTGGGGACCGTGTCGCGATCCGCGGGCGCT
CGCCTGGACGCGTTGAGCATGAAGCTGGGCGAGGACGAGAAGGTTGTTCT
CATCGGTGTCGCCGCTGACTCTGGTTGCGGAAAGTCGACGTTCATGCGTC
GGCTGACATCTATCTTCGGGGGTGACTCCGTGGGCCCGCTCGGGGGGGGG
TTCGACAAGGGCGGCTGGGAGACGAACTCTCTGGTGTCTGACCTCACCAC
CGTCCTGTGCCTGGACGACTACCACCTGAACGACCGCGGCGGGCGCAAGG
TTGTTCTCATCGGTGTCGCCGCTGACTCTGGTTGCGGAAAGTCGACGTTC
ATGCGTCGGCTGACATCTATCTTCGGGGGTGACTCCGTGGGCCCGCTCGG
GGGGGGGTTCGACAAGGGCGGCTGGGAGACGAACTCTCTGGTGTCTGACC
TCACCACCGTCCTGTGCCTGGACGACTACCACCTGAACGACCGCGGCGGG
CGCAAGGTGTCGGGCAGGACCGCGCTCCACACCGAGGAGCAAAAGTTTGA
CCTCATGTACGAGCAGCTCAACGACCTCAAGAACGGCAAGAGCGTGATGA
AGCCCATCTACAACCACGTCAACGGGACCCTGGACAAGCCCGAGGAGATC
AAGCCCACCCCCATCGTCATCATCGAGGGGCTCCACCCCTTCGTGGACGA
GCGCGTGCGCGACCTGCTGGACTTCACCATCTACCTGGACATCTCGGACG
AGATCAAGTTCGCGTGGAAGATCCAGAGGGACATGATGGAGCGCGGACAC
TCCCTGGAGTCCATCCAGGCCTCCATCGAGGTGTCGGGCAGGACCGCGCT
CCACACCGAGGAGCAAAAGTTTGACCTCATGTACGAGCAGCTCAACGACC
TCAAGAACGGCAAGAGCGTGATGAAGCCCATCTACAACCACGTCAACGGG
ACCCTGGACAAGCCCGAGGAGATCAAGCCCACCCCCATCGTCATCATCGA
GGGGCTCCACCCCTTCGTGGACGAGCGCGTGCGCGACCTGCTGGACTTCA
CCATCTACCTGGACATCTCGGACGAGATCAAGTTCGCGTGGAAGATCCAG
AGGGACATGATGGAGCGCGGACACTCCCTGGAGTCCATCCAGGCCTCCAT
CGAG
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