mRNA_L-elsbetiae_contig550.13770.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Match: D7FVF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVF4_ECTSI) HSP 1 Score: 255 bits (652), Expect = 1.770e-78 Identity = 134/164 (81.71%), Postives = 143/164 (87.20%), Query Frame = 3 Query: 216 PQNSRGAATSVTRGQRSSDLSMSSTVVIPADFKLPIGIGAFGLAVTGLGNVGAGFPISVVGLLLALQATRVSFEFDDVAMEVKIGNDEGELESSGENAFVGGESRWNYDTWTNWEVYPNEQLPILMYFKETQTKPEGQIHFFPFIMEPGRLLEEVRARVKQVAK 707 P SR AT+ R +RS DL MS TVV+P+DFKLPIGI AFGLA+TGLGNVGAGFP+SVVGLLLA QATRV FEFDDVAMEVKIG ELESSGENAFVGGESRWNYDTWTNWEVYP+E+LPILMYFKETQTKPEGQIHFFPFIMEP LL+EVRARV QV K Sbjct: 47 PIPSRCVATAERR-RRSGDLGMS-TVVVPSDFKLPIGIAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIMEPDVLLQEVRARVPQVVK 208
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Match: A0A836CR12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR12_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.320e-48 Identity = 89/135 (65.93%), Postives = 104/135 (77.04%), Query Frame = 3 Query: 288 TVVIPADFKLPIGIGAFGLAVTGLGNVGAGFPISVVGLLLALQATRVSFEFDDVAMEVKIGNDEGELESSGENAFVGGESRWNYDTWTNWEVYPNEQLPILMYFKETQTKPEGQIHFFPFIMEPGRLLEEVRARV 692 TV IP DF+LP + A G A+ GN AG P+ +G LL LQATRV FEFD +MEVKI +G+L SGEN VGG++RW YDTWTNWEVYP+E LP+LMYFKETQT P+GQIHFFPFIM PG+LL+EVRARV Sbjct: 60 TVAIPPDFRLPAALVAIGGALAVSGNR-AGLPVLGIGALLGLQATRVRFEFDAESMEVKIDAGKGDLADSGENFAVGGQNRWAYDTWTNWEVYPSEALPVLMYFKETQTSPDGQIHFFPFIMNPGQLLKEVRARV 193
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Match: A0A0G4FRW9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FRW9_VITBC) HSP 1 Score: 142 bits (358), Expect = 2.090e-35 Identity = 76/144 (52.78%), Postives = 97/144 (67.36%), Query Frame = 3 Query: 288 TVVIPADFKLPIGIGAFGLAVT-GLGNVGAGFPISVVGLLLALQATRVSFEFDDVAMEVKIGNDEGELES---SGENAFVGGESRWNYDTWTNWEVYPNEQLPILMYFKETQTKPEGQIHFFPFIMEPGRLLEEVRARVKQVAK 707 TVV+P DF+L G A G A+ N AG PI ++G LALQ TRV FEFD ++EVKI +G+ E+ SG+N VGG +RW YDT+TNWE+YP+ LPIL+YFKETQT PEGQIHFFP IM +L E + R ++ + Sbjct: 79 TVVVPPDFRLAAGFVAGGAALCLAANNYAAGVPIGLIGAFLALQTTRVRFEFDADSLEVKILKKDGDAETLADSGDNFAVGGANRWKYDTFTNWEMYPSPSLPILVYFKETQTIPEGQIHFFPVIMNGRKLYEIMEERCPRLPR 222
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Match: K8Z8S9_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z8S9_NANGC) HSP 1 Score: 136 bits (342), Expect = 2.360e-33 Identity = 71/136 (52.21%), Postives = 91/136 (66.91%), Query Frame = 3 Query: 294 VIPADFKLPIG--IGAFGLAVTGLGNVGAGFPISVVGLLLALQATRVSFEFDDVAMEVK-IGNDEGELESSGENAFVGGESRWNYDTWTNWEVYPNEQLPILMYFKETQTKPEGQIHFFPFIMEPGRLLEEVRARV 692 VI D+++ G +G GLA+ L N GAG P++++G LA + +V F FD+ AMEV +G D L EN VGG +RW Y ++TNWE YP+EQ+P+L+YFKETQTKPEGQIHFFP I P RLLE R V Sbjct: 67 VIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYASFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYV 202
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Match: A0A7S2XVT8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVT8_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.150e-31 Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 3 Query: 285 STVVIPADFKLP---IGIGAFGLAVTGLGNVGAGFPISVVGLLLALQATRVSFEFDDVAMEVKIGNDEGELESSGENAFVGGESRWNYDTWTNWEVYPNEQLPILMYFKETQTKPEGQIHFFPFIMEPGRLLE 674 ST++ P DF++P IGIG GLAV G N+ AG PI+++G L Q TR+ F FD A+E+K +G L +SGEN VGG +RW+YDT+TNW YP+ PIL+YFKETQT PEGQIHFFP I + +L E Sbjct: 3 STIISP-DFRIPLALIGIGV-GLAVPGE-NIFAGIPITLIGAALTFQTTRLRFVFDSKALELKYATKDG-LVNSGENFKVGGANRWDYDTFTNWVFYPSPSFPILVYFKETQTSPEGQIHFFPVIADGKKLYE 131
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Match: A0A4D9CZP5_9STRA (Sm domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZP5_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.580e-31 Identity = 71/136 (52.21%), Postives = 91/136 (66.91%), Query Frame = 3 Query: 294 VIPADFKLPIG--IGAFGLAVTGLGNVGAGFPISVVGLLLALQATRVSFEFDDVAMEVK-IGNDEGELESSGENAFVGGESRWNYDTWTNWEVYPNEQLPILMYFKETQTKPEGQIHFFPFIMEPGRLLEEVRARV 692 VI D+++ G +G GLA+ L N GAG P++++G LA + +V F FD+ AMEV +G D L EN VGG +RW Y ++TNWE YP+EQ+P+L+YFKETQTKPEGQIHFFP I P RLLE R V Sbjct: 247 VIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYASFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYV 382
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Match: I1HZH7_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HZH7_BRADI) HSP 1 Score: 130 bits (327), Expect = 3.750e-31 Identity = 75/135 (55.56%), Postives = 92/135 (68.15%), Query Frame = 3 Query: 288 TVVIPADFKLPIGI----GAFGLAVTGLGNVGAGFPISVVGLLLALQATRVSFEFDDVAMEVKIGNDEGELESSGENAFVGGESRWNYDTWTNWEVYPNEQLPILMYFKETQTKPEGQIHFFPFIMEPGRLLEEV 680 TVV D++LPI I GAF A N+ A P+ ++GLLL Q TRV F FDD ++EVK+GN EL+ SGEN FVGG++RW Y T+ NWE++ Q PIL+YFKETQTKPEGQIHFFP I GR L +V Sbjct: 75 TVVPDPDYRLPIAILGIAGAFAYA----DNLLAAAPVGLLGLLLLFQTTRVRFVFDDDSLEVKVGN---ELQESGENVFVGGKNRWKYSTFVNWELWW-PQFPILVYFKETQTKPEGQIHFFPVIFN-GRQLYDV 200
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Match: UPI001F5DBB40 (uncharacterized protein LOC124692150 isoform X1 n=5 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DBB40) HSP 1 Score: 130 bits (326), Expect = 4.890e-31 Identity = 73/138 (52.90%), Postives = 92/138 (66.67%), Query Frame = 3 Query: 288 TVVIPADFKLPIGI----GAFGLAVTGLGNVGAGFPISVVGLLLALQATRVSFEFDDVAMEVKIGNDEGELESSGENAFVGGESRWNYDTWTNWEVYPNEQLPILMYFKETQTKPEGQIHFFPFIMEPGRLLEEVRAR 689 TVV D++LPI I GAF A N+ A P+ ++GLLL Q TRV F FDD A+EVK+GN +L+ SGEN FVGG++RW Y T+ NWE++ Q PIL+YFKETQTKPEGQIHFFP I +L + + R Sbjct: 74 TVVPDPDYRLPIAILGIAGAFAYA----DNLLAAAPVGLLGLLLLFQTTRVRFVFDDEALEVKVGN---QLQESGENVFVGGKNRWKYSTFVNWELWW-PQFPILVYFKETQTKPEGQIHFFPVIFNGQQLYDTMVER 203
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Match: UPI00053FD302 (uncharacterized protein LOC104902041 isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FD302) HSP 1 Score: 129 bits (325), Expect = 6.380e-31 Identity = 77/156 (49.36%), Postives = 105/156 (67.31%), Query Frame = 3 Query: 219 QNSRGAATSVTR--GQRSSDLSMSSTVVIPADFKLPIGI-GAFGLAVTGLGNVGAGFPISVVGLLLALQATRVSFEFDDVAMEVKIGNDEGELESSGENAFVGGESRWNYDTWTNWEVY-PNEQLPILMYFKETQTKPEGQIHFFPFIMEPGRLLE 674 Q+ R + S+T G++ + TV+ D+++PI + GA G A+ N+ A P+ ++GLLL +QATRV F FDD A+EVK+G+ EL+ SGENAFVGG++RW Y T+ NWE + PN PIL+YFKETQTKPEGQIHFFP I +L + Sbjct: 49 QSCRSRSVSITSLFGRKVKAKTKRETVIPDPDYRIPIVLLGATG-ALVYTDNLVAAVPVGLLGLLLLVQATRVRFVFDDEALEVKVGS---ELKESGENAFVGGKNRWKYSTFVNWEFWWPN--FPILVYFKETQTKPEGQIHFFPIIFNGKQLYD 198
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Match: A0A7C8ZQ51_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZQ51_OPUST) HSP 1 Score: 129 bits (323), Expect = 7.370e-31 Identity = 70/131 (53.44%), Postives = 93/131 (70.99%), Query Frame = 3 Query: 288 TVVIPADFKLPIGI-GAFGLAVTGLGNVGAGFPISVVGLLLALQATRVSFEFDDVAMEVKIGNDEGELESSGENAFVGGESRWNYDTWTNWEVY-PNEQLPILMYFKETQTKPEGQIHFFPFIMEPGRLLE 674 TV+ D+++PI + GA GL V N+ A P+ ++GLLL +QATRV F FDD A+EV++G+ EL+ SGEN FVGG++RW Y ++ NWE + PN PIL+YFKETQTKPEGQIHFFP I +L + Sbjct: 53 TVIPDPDYRIPIVLLGASGLLVYS-NNLAAAVPVGLLGLLLLVQATRVRFVFDDEALEVRVGS---ELKESGENVFVGGKNRWKYSSFVNWEFWWPN--FPILVYFKETQTKPEGQIHFFPIIFNGNQLYD 177 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig550.13770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig550.13770.1 >prot_L-elsbetiae_contig550.13770.1 ID=prot_L-elsbetiae_contig550.13770.1|Name=mRNA_L-elsbetiae_contig550.13770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp MVSTPQNSRGAATSVTRGQRSSDLSMSSTVVIPADFKLPIGIGAFGLAVTback to top mRNA from alignment at L-elsbetiae_contig550:12449..15978- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig550.13770.1 ID=mRNA_L-elsbetiae_contig550.13770.1|Name=mRNA_L-elsbetiae_contig550.13770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3530bp|location=Sequence derived from alignment at L-elsbetiae_contig550:12449..15978- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig550:12449..15978- >mRNA_L-elsbetiae_contig550.13770.1 ID=mRNA_L-elsbetiae_contig550.13770.1|Name=mRNA_L-elsbetiae_contig550.13770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig550:12449..15978- (Laminarionema elsbetiae ELsaHSoW15)back to top |