mRNA_L-elsbetiae_contig550.13769.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Match: D7FVF3_ECTSI (GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF3_ECTSI) HSP 1 Score: 202 bits (515), Expect = 8.430e-58 Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 1 Query: 10 AAAAAASFEAHAVLALELSSRVVLANRQRVSSLWPALHSFLARVLGGEDSLTMTRMPYLVERAMVTVLRACIHMFDREDMGALLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQ 354 AAAAAASFEAHAVLALELSSRVVLANRQRV SLWPALHSFLARVLGGEDS+TMTRMPYLVERAMVTVLRACIHMFDREDMGA+LLQSLKLLLSLPPDVVLPLSNRLASGLLILIQ Sbjct: 1261 AAAAAASFEAHAVLALELSSRVVLANRQRVPSLWPALHSFLARVLGGEDSVTMTRMPYLVERAMVTVLRACIHMFDREDMGAMLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQ 1375
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Match: A0A6H5JJL6_9PHAE (SEC7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJL6_9PHAE) HSP 1 Score: 201 bits (511), Expect = 2.910e-57 Identity = 111/116 (95.69%), Postives = 113/116 (97.41%), Query Frame = 1 Query: 10 AAAAAASFEAHAVLALELSSRVVLANRQRVSSLWPALHSFLARVLGGEDSLTMTRMPYLVERAMVTVLRACIHMFDREDMGALLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQV 357 AA AAASFEAHAVLALELSSRVVLANRQRV SLWPALHSFLARVLGGEDS+TMTRMPYLVERAMVTVLRACIHMFDREDMG +LLQSLKLLLSLPPDVVLPLSNRLASGLLILIQV Sbjct: 1311 AAVAAASFEAHAVLALELSSRVVLANRQRVPSLWPALHSFLARVLGGEDSVTMTRMPYLVERAMVTVLRACIHMFDREDMGTMLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQV 1426
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Match: A0A836CJX6_9STRA (Sec7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX6_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.510e-25 Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 1 Query: 22 AASFEAHAVLALELSSRVVLANRQRVSSLWPALHSFLARVLGGEDSLTMTRMPYLVERAMVTVLRACIHMFDREDMGAL-LLQSLKLLLSLPPDVVLPLSNRLASGLLILIQ 354 AA+FE HAVLALEL SRVVLANR RV +LWP +H+++ RV G + +++ R+P+LVER +VTVLR+CIH+ D+ A LL SL LL LP ++ PL +R+A+GLL L+Q Sbjct: 1213 AANFEGHAVLALELGSRVVLANRHRVEALWPLMHAYVERVFGSQAAVS--RLPFLVERLVVTVLRSCIHLLDQSRAAAPPLLASLALLQHLPQAILEPLGDRVATGLLALVQ 1322
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Match: A0A7S1FNQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNQ1_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 2.500e-15 Identity = 46/110 (41.82%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 25 ASFEAHAVLALELSSRVVLANRQRVSSLWPALHSFLARVLGGEDSLTMTRMPYLVERAMVTVLRACIHMFDREDMGALLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQ 354 A+FE H+V LEL+SRV+L N R ++P S L +L ++ T PYL+ER +VTVLRACIH+FD + LL +L+LL ++P ++ +S+RL G+ I+++ Sbjct: 85 ANFEDHSVFLLELASRVMLWNEHRAQEIFPMFQSHLVTIL--QNVKTCRVAPYLLERTLVTVLRACIHLFDNVKLRPLLFSTLELLTNIPNFIMRHISDRLGCGMAIILR 192
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Match: A0A7S3PZD4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD4_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.050e-14 Identity = 42/108 (38.89%), Postives = 68/108 (62.96%), Query Frame = 1 Query: 31 FEAHAVLALELSSRVVLANRQRVSSLWPALHSFLARVLGGEDSLTMTRMPYLVERAMVTVLRACIHMFDREDMGALLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQ 354 F+ HAV ALELS+R++ N S L+ L +L E + + P+L+ER+++T+LR CIHM DR+DM +L L+LLL +P D+ + + +R+A G+ I++ Sbjct: 1139 FQHHAVFALELSARLLFCNMDFASELFSLFVPRLTDILTSEKDVHASANPFLMERSIITILRFCIHMIDRDDMRQGVLSLLRLLLEIPEDIFIAIVDRVACGMAIIVH 1246
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Match: A0A1V9ZDS2_9STRA (SEC7 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZDS2_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.950e-14 Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 40 HAVLALELSSRVVLANRQRVSSLWPALHSFLARVLGGEDSLTMTRMPYLVERAMVTVLRACIHMFDREDMGALLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQ 354 +A+LALEL +VL N R ++LWPA+H+++AR+L + MT LVER +V VLR CI +F E +LL +L LL L V+L LS RL +GL +LI+ Sbjct: 1096 NAILALELGINLVLVNIHRFTTLWPAVHTYVARILHSKADFEMT---LLVERVVVNVLRVCIRLFHDEAARPMLLDTLILLKDLDHQVLLVLSERLTAGLHMLIK 1197
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Match: A0A7S2XS68_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS68_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 5.180e-13 Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 31 FEAHAVLALELSSRVVLANRQRVSSLWPALHSFLARV---LGGEDSLTMTRMPYLVERAMVTVLRACIHMFDREDMGALLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQ 354 FE HAV ALEL++R++L+NR R S L+P S + L R+PYL+ER +VT+LR+ IH++D ++ L +SL LLL LP +++RLA G+ I+++ Sbjct: 42 FEQHAVFALELAARLLLSNRDRASELYPLFLSKFESITAHLNASSKNGTLRIPYLMERTVVTILRSFIHLYDIPELRPSLKKSLLLLLGLPKKFRSEVADRLACGMAIILR 152
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Match: A0A1V9YJT4_9STRA (SEC7 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJT4_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.100e-12 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 40 HAVLALELSSRVVLANRQRVSSLWPALHSFLARVLGGEDSLTMTRMPYLVERAMVTVLRACIHMFDREDMGALLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQVPIPVLYA 378 +A+LALELS +VL N R +LWPA+H+++AR+L + MT LVER +V VLR CI +F E + +LL +L+L P + L+ RLA GL +LI+ L+A Sbjct: 1055 NAILALELSINLVLVNIHRFQTLWPAVHTYVARILHSKADFEMT---LLVERVVVNVLRVCIRLFHDESVRPMLLDTLEL----PAPSLQVLAERLACGLHMLIKANAMYLHA 1160
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Match: T0Q6U2_SAPDV (SEC7 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q6U2_SAPDV) HSP 1 Score: 73.6 bits (179), Expect = 1.500e-12 Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 40 HAVLALELSSRVVLANRQRVSSLWPALHSFLARVLGGEDSLTMTRMPYLVERAMVTVLRACIHMFDREDMGALLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQ 354 +A+LALEL +VL N R +LWPA+H+++AR+L + MT LVER +V VLR CI +F + +LL +L LL L + LS RLA+GL +L++ Sbjct: 1093 NAILALELGINLVLVNTHRFPTLWPAVHTYVARILHSKADFEMT---LLVERVVVNVLRVCIRLFHDDAARPMLLDTLVLLKELEAPSLQVLSERLAAGLHMLVK 1194
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Match: A0A067BMC0_SAPPC (SEC7 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BMC0_SAPPC) HSP 1 Score: 72.8 bits (177), Expect = 2.710e-12 Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 40 HAVLALELSSRVVLANRQRVSSLWPALHSFLARVLGGEDSLTMTRMPYLVERAMVTVLRACIHMFDREDMGALLLQSLKLLLSLPPDVVLPLSNRLASGLLILIQ 354 +A+LALEL +VL N R +LWPA+H+++AR+L + MT LVER +V VLR CI +F + +LL +L LL L + LS RLA+GL +L++ Sbjct: 593 NAILALELGINLVLVNIHRFPTLWPAVHTYVARILHSKADFEMT---LLVERVVVNVLRVCIRLFHDDAARPMLLDTLVLLKELEAPSLQVLSERLAAGLHMLVK 694 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig550.13769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig550.13769.1 >prot_L-elsbetiae_contig550.13769.1 ID=prot_L-elsbetiae_contig550.13769.1|Name=mRNA_L-elsbetiae_contig550.13769.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp MAAAAAAAASFEAHAVLALELSSRVVLANRQRVSSLWPALHSFLARVLGGback to top mRNA from alignment at L-elsbetiae_contig550:4900..6135+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig550.13769.1 ID=mRNA_L-elsbetiae_contig550.13769.1|Name=mRNA_L-elsbetiae_contig550.13769.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1236bp|location=Sequence derived from alignment at L-elsbetiae_contig550:4900..6135+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig550:4900..6135+ >mRNA_L-elsbetiae_contig550.13769.1 ID=mRNA_L-elsbetiae_contig550.13769.1|Name=mRNA_L-elsbetiae_contig550.13769.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=810bp|location=Sequence derived from alignment at L-elsbetiae_contig550:4900..6135+ (Laminarionema elsbetiae ELsaHSoW15)back to top |