mRNA_L-elsbetiae_contig55.13765.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig55.13765.1
Unique NamemRNA_L-elsbetiae_contig55.13765.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 3.000e-109
Identity = 161/266 (60.53%), Postives = 200/266 (75.19%), Query Frame = 1
Query:   43 DSHYMGWVFRNAAREAGVLAESYESACIIMHVSRGGGRGECASRSPLWNNGTNHVMVNFGDRGRSVGDEVANSFAMDVASNLLSCIYRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGSAYLTGHGSEERMSLVPLLHDEENGAVMSVHCFEVHGEQLLPQNVEYCQSLKSHHYDYEYATLMNTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSFMFSPDQVGPHMMKILRATPQVQLEEMQVRS 840
            D HY+ WV RN A + G+LAE+YESACI++HVS G  +  CA   P WN G NH++V+  D+GR    +VA S+AM+ A+N+ +C YRSGYDISVPLAPK  F+ LA++ P DR FFLT KGS YL+GHGS ERMSLVP L DE NG +MS+HCFEVH E LLP+NVEYC++L   + D+ Y +LMNTTFGLVP+GRSPGTYRL EVM AG+IPV +  D V PF E  DWSSFSF F+PDQV   M++ LRA P+ +LE+MQ +S
Sbjct:  132 DHHYVEWVLRNEAEQMGMLAETYESACILVHVSPGSTK-PCAVDQPRWNGGANHLLVDMSDKGRDSRPDVAGSYAMEAATNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVP-LQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKS 395          
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 8.890e-109
Identity = 158/275 (57.45%), Postives = 203/275 (73.82%), Query Frame = 1
Query:   16 GSRLGEEKDDSHYMGWVFRNAAREAGVLAESYESACIIMHVSRGGGRGECASRSPLWNNGTNHVMVNFGDRGRSVGDEVANSFAMDVASNLLSCIYRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGSAYLTGHGSEERMSLVPLLHDEENGAVMSVHCFEVHGEQLLPQNVEYCQSLKSHHYDYEYATLMNTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSFMFSPDQVGPHMMKILRATPQVQLEEMQVRS 840
            G ++   +   HY+ WV RN A + G+LAE+YESACI++HVS G  +  CA   P W+ G NH++V+  D GR     VA S+AM+ ASN+ +C YRSG+DISVPL  KK F+ LA++A  DR FFLT KGS YL+ HGS ERMSLVP L DE NG +MS+HCFE+H E LLP+NVEYC++L   + D+ Y +LMN+TFGLVP+GRSPGT+RL EVM AG+IPV +  D VLPF+E  DWSSFSF F+PDQVGP M++ LRA P+ +LE+MQ +S
Sbjct:   27 GKKVSSTRMHHHYVEWVLRNEAEQMGMLAETYESACILVHVSPGSTK-PCAVDQPRWSGGANHLLVDMSDNGRGSRPIVAGSYAMEAASNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVP-LQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKS 299          
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 5.130e-99
Identity = 147/259 (56.76%), Postives = 189/259 (72.97%), Query Frame = 1
Query:   64 VFRNAAREAGVLAESYESACIIMHVSRGGGRGECASRSPLWNNGTNHVMVNFGDRGRSVGDEVANSFAMDVASNLLSCIYRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGSAYLTGHGSEERMSLVPLLHDEENGAVMSVHCFEVHGEQLLPQNVEYCQSLKSHHYDYEYATLMNTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSFMFSPDQVGPHMMKILRATPQVQLEEMQVRS 840
              RN   + G+LA++Y SAC+ +HV +G  R  CA   P WNNG NH++V+  D+GR+   +VA SFAM+ A+N+ +C YRSGYDISVPLAP++  H LA +APLDR FFLT K + Y++GHGSEER+SL+P L DEE+G V+++HCFE H E LLP+N E+CQ+LK  +  Y+Y +LMN+TFGLVP+GR P TYRL EVM AG IPV + RD V PF E  DW S SF F+PD+V   MMK L A P+ QLEEMQ +S
Sbjct:  136 TLRNETAQLGMLADTYASACMFVHVGKGLKR-PCAVNQPRWNNGANHLLVDMSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYVSGHGSEERISLLP-LQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKS 392          
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 9.080e-85
Identity = 137/267 (51.31%), Postives = 178/267 (66.67%), Query Frame = 1
Query:   40 DDSHYMGWVFRNAAREAGVLAESYESACIIMHVSRGGGRGECASRSPLWNNGTNHVMVNFGDRGRSVGDEVANSFAMDVASNLLSCIYRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGSAYLTGHGSEERMSLVPLLHDEENGAVMSVHCFEVHGEQLLPQNVEYCQSLKSHHYDYEYATLMNTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSFMFSPDQVGPHMMKILRATPQVQLEEMQVRS 840
            ++S  +   +R AAR+AGVL+E+Y  AC+ +HV++      C +  PLWN G NHVMV+  DR R     +A S AMD +SN+ SC YRSGYD +VPL  +  F  L E+AP  R +FLT KG+ YL+G G +ERMS+VP LH E  G +M ++CFE+H E LLP+N E+C +L      +EY  LMNTTFGLVP+GR P TYRLAEVM AGAIPV ++RD V PF E  DW + SF F P++VGP MM  LR+    +L  MQ +S
Sbjct:  238 NESLMLSHTWREAARDAGVLSETYRDACLFLHVNKRLNHVPCPAEKPLWNGGKNHVMVDLTDRTRDKKPLIAGSAAMDASSNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVP-LHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKS 503          
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 8.010e-84
Identity = 136/281 (48.40%), Postives = 184/281 (65.48%), Query Frame = 1
Query:   10 ANGSRLGEEKD-DSHYMGWVFRNAAREAGVLAESYESACIIMHVSRGGGRGECASRSPLWNNGTNHVMVNFGD---RGRSVGDEVANSFAMDVASNLLSCIYRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGSAYLTGHGSEERMSLVPLLHDEENGAVMSVHCFEVHGEQLLPQNVEYCQSLKSHHYDYEYATLMNTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSFMFSPDQVGPHMMKILRATPQVQLEEMQVRS 840
            +N  R+ +  + D  + G  +R A   AG+LA +YE AC+ +HV+       CA+R+PLWN G NH+M+ F     +G+     ++N++AMD + + LSC YRSGYD+S+PL P K F   A     DR +FLTFKG+ YL G+G EER S V  +HD  NG V  + C  +HG++ LP+N +YCQ  +  +  Y+Y  LMNTTF LVP+GRSPG++RL EVM AGAIPV + RD++ PF+E  DW SFSF+FSPD VGP MM+ LRA    QL EMQ +S
Sbjct:  216 SNKLRINDHTNLDKQHQGSYWREAVWRAGLLANTYEEACLFIHVNTHNHDEPCATRAPLWNGGVNHIMMEFTPWWIKGQRARPHISNTYAMDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEER-SAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKS 495          
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 3.320e-82
Identity = 123/206 (59.71%), Postives = 155/206 (75.24%), Query Frame = 1
Query:  223 DRGRSVGDEVANSFAMDVASNLLSCIYRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGSAYLTGHGSEERMSLVPLLHDEENGAVMSVHCFEVHGEQLLPQNVEYCQSLKSHHYDYEYATLMNTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSFMFSPDQVGPHMMKILRATPQVQLEEMQVRS 840
            D+GR+   +VA SFAM+ A+N+ +C YRSGYDISVPLAP++  H LA ++PLDR FFLT K + Y++GHGSEER+SL+P L DEENG V+++HCFE H E LLP+N E+CQ+LK  +  Y+Y +LMN+TFGLVP+GR P TYRL EVM AG+IPV + RD V PF E  DW S SF F+PD+V   MM  L A P  QLEEMQ +S
Sbjct:    3 DKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVSPLDREFFLTTKCTLYISGHGSEERISLLP-LQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKS 207          
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 7.630e-82
Identity = 121/191 (63.35%), Postives = 151/191 (79.06%), Query Frame = 1
Query:  268 MDVASNLLSCIYRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGSAYLTGHGSEERMSLVPLLHDEENGAVMSVHCFEVHGEQLLPQNVEYCQSLKSHHYDYEYATLMNTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSFMFSPDQVGPHMMKILRATPQVQLEEMQVRS 840
            M+ ASN+ +C YRSG+DISVPL   K F+ LA++A  DR FFLT KG+ YL+GHGS ERMSLVP L DE NG +MS+HCFE+H E LLP+NVEYC++L   + D+ Y +LMN+TFGLVP+GRSPGTYRL EVM AG+IPV +  D VLPF+E  DWSSFSF F+PDQVGP M++ LRA P+ +LE+MQ +S
Sbjct:    1 MEAASNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVP-LQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKS 190          
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 5.130e-64
Identity = 104/189 (55.03%), Postives = 130/189 (68.78%), Query Frame = 1
Query:  268 MDVASNLLSCIYRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGSAYLTGHGSEERMSLVPLLHDEENGAVMSVHCFEVHGEQLLPQNVEYCQSLKSHHYDYEYATLMNTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSFMFSPDQVGPHMMKILRATPQVQLEEMQV 834
            MD + + LSC YRSGYD+S+PL P K F   A     DR +FLTFKG+ YL G+G EER S V   HD  NG V  + C  +HG+ +LP+N +YCQ  +  +  Y+Y  LMNTTF LVP+GRSPG++RL EVM AGAIPV + RD++ PF+E  DW SFSF+FSPD VGP MM+ LRA    +L EMQV
Sbjct:    1 MDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEER-SAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQV 188          
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Match: D7G4H4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H4_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 3.050e-58
Identity = 101/183 (55.19%), Postives = 125/183 (68.31%), Query Frame = 1
Query:  289 LSCIYRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGS--AYLTGHGSEERMSLVPLLHDEENGAVMSVHCFEVHGEQLLPQNVEYCQSLKSHHYDYEYATLMNTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSFMFSPDQVGPHMMKILRATPQVQLEEMQ 831
            +S   R+GYDISVPLAP+  FH LA++AP DR FFLT   S   YL  HGSEE M L+P L D+ENG  +S+HCFE H + LLP+N E+ Q+   H+   +Y +LMN+TFGLVP+G S GTYRL EVM AG+IPV + RD V  F E  DW+S SF F+PD+V    M  L A P+ QLE MQ
Sbjct:    1 MSTAGRTGYDISVPLAPRHVFHDLAKVAPWDRRFFLTTTCSLPGYLGEHGSEEWMGLIP-LQDKENGVNLSMHCFENHQDHLLPENPEFRQAQTDHYQGQDYRSLMNSTFGLVPAGWSSGTYRLGEVMSAGSIPVFVGRDLVPSFMEQIDWNSISFAFTPDEVKSRTMSTLLAVPREQLERMQ 182          
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 3.750e-54
Identity = 110/283 (38.87%), Postives = 154/283 (54.42%), Query Frame = 1
Query:   64 VFRNAAREAGVLAESYESACIIMH-VSRGGGRGECASRSPLWNNGTNHVMVNFGDRGRSVGDEVANSFAMDVASNLLSCIYRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGSAYLTGHGSEERMSLVPLLHDEENGAVMSVH-------------------------CFEVHGEQLLPQNVEYCQ-SLKSHHYDYEYATLMNTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSFMFSPDQVGPHMMKILRATPQVQLEEMQ 831
              R+AA E G+L ++ + ACI+ + V R   +GEC S++P W  G NH +++  D  R+    +    AM + SN+  C YR GYDI++PL  ++    L E+AP DR +F TFKG  YL+G+G  ER +++ L+    + A                              C   H EQLL  N   C+ S + +     Y  LMNTTF L+P+GRSP TYRLAE + AGA+PV I +D+V PF     WS FSF F P++V P M+K LRA P  +L +MQ
Sbjct:  275 TLRHAAAERGLLVDTPDEACIVFYAVPRD--KGECVSKTPTWGEGQNHALLDLNDESRAARSSLDGK-AMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAPAEGRGEMGRANGDSQSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGKIPWSDFSFSFPPEEV-PRMLKTLRAVPDRELAQMQ 553          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig55.13765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGQ8_9PHAE3.000e-10960.53GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H1_ECTSI8.890e-10957.45Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5KKV6_9PHAE5.130e-9956.76GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JRU9_9PHAE9.080e-8551.31GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5L9T2_9PHAE8.010e-8448.40GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H7_ECTSI3.320e-8259.71Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H3_ECTSI7.630e-8263.35Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LQY4_ECTSI5.130e-6455.03Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H4_ECTSI3.050e-5855.19Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LNT2_ECTSI3.750e-5438.87Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig55contigL-elsbetiae_contig55:10611..14861 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.8
Seed ortholog evalue5e-87
Seed eggNOG ortholog2880.D7G4H1
Preferred nameEXTL1
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
EC2.4.1.224,2.4.1.225
COG Functional cat.S
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Exons3
Model size840
Cds size840
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig55.13765.1prot_L-elsbetiae_contig55.13765.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig55 10611..14861 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816577.399438-CDS-L-elsbetiae_contig55:10610..110451622816577.399438-CDS-L-elsbetiae_contig55:10610..11045Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig55 10611..11045 -
1691683659.734521-CDS-L-elsbetiae_contig55:10610..110451691683659.734521-CDS-L-elsbetiae_contig55:10610..11045Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig55 10611..11045 -
1622816577.4132936-CDS-L-elsbetiae_contig55:11599..117571622816577.4132936-CDS-L-elsbetiae_contig55:11599..11757Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig55 11600..11757 -
1691683659.7492197-CDS-L-elsbetiae_contig55:11599..117571691683659.7492197-CDS-L-elsbetiae_contig55:11599..11757Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig55 11600..11757 -
1622816577.4243703-CDS-L-elsbetiae_contig55:14614..148611622816577.4243703-CDS-L-elsbetiae_contig55:14614..14861Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig55 14615..14861 -
1691683659.7596152-CDS-L-elsbetiae_contig55:14614..148611691683659.7596152-CDS-L-elsbetiae_contig55:14614..14861Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig55 14615..14861 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig55.13765.1

>prot_L-elsbetiae_contig55.13765.1 ID=prot_L-elsbetiae_contig55.13765.1|Name=mRNA_L-elsbetiae_contig55.13765.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp
MLAANGSRLGEEKDDSHYMGWVFRNAAREAGVLAESYESACIIMHVSRGG
GRGECASRSPLWNNGTNHVMVNFGDRGRSVGDEVANSFAMDVASNLLSCI
YRSGYDISVPLAPKKHFHYLAEIAPLDRAFFLTFKGSAYLTGHGSEERMS
LVPLLHDEENGAVMSVHCFEVHGEQLLPQNVEYCQSLKSHHYDYEYATLM
NTTFGLVPSGRSPGTYRLAEVMGAGAIPVIIARDYVLPFREHFDWSSFSF
MFSPDQVGPHMMKILRATPQVQLEEMQVRS
back to top

mRNA from alignment at L-elsbetiae_contig55:10611..14861-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig55.13765.1 ID=mRNA_L-elsbetiae_contig55.13765.1|Name=mRNA_L-elsbetiae_contig55.13765.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4251bp|location=Sequence derived from alignment at L-elsbetiae_contig55:10611..14861- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGCAGCCAACGGCAGTAGGCTTGGCGAGGAAAAGGACGATTCACA CTACATGGGTTGGGTTTTCCGCAATGCTGCTCGAGAGGCTGGTGTGCTGG CTGAATCGTACGAAAGCGCGTGCATCATCATGCACGTCAGCAGAGGGGGT GGGCGGGGCGAGTGCGCATCGCGCTCTCCTCTTTGGAACAACGGCACCAA CCACGTCATGGTGAACTTCGGTGACAGGGGGAGGTCAGTTGGCGATGGTG TGGCAGGGAGACAAAGTAGCAAATCATTGTTTCGAGGCGGGCAATATTAT TGGGCGCTGCCAAGATCACAGGGCGTTAGGGGTCCGTTTAGCTCCTGGTC ACATCAAGAGAACAAGGAGCGCATGCGTGGCGGGCCAGGCGTGTCAGCAC TATGCTTTGCATCCCTGGGGCTTTCTTAAATATGCGCTACACGCCAAACA ACCAGAGGACAATGTTTTATCGTTGCTGCTGTGTTCCGCACTGCCGGAAG CTTAGCGAGTAATTGTTGAGTTATTCGAACCTCCCCTGAGGAGGTGAAAC AGGTAGGGAATCGTCCCAAACACCGCTCTTGTTGACATCAGGAGGAGATT AACAGAGCGCGAAGAGAAACAGATGTTTGTTTGACAGAAACTACTGCATG CAACTACTGCCTACTGTGCTGACGGGCTGGAACTGCGTCCGTCATTAAAT ATGAAGGACGTTTATAGTTCAACGGCACTTTGAAGCATACTTCGAACTAT ACGAATAAGTGATAACACACAGCTAATTCCACCTTTGTTTGTTTCAAACC GGTCATCCAAGCGGCGCAAACGCAAACCGCCACCAAGCCCGGTGTTGGGA ACAGAAGAAAATGCTCCATCATTGTTCTGACATTTTCCTTGAAACTTCAA CCAAGCATAAACCTCAATGAAAATCTTGCCTGGAGCCTATGCTTGGCTTA TAGATGTGTATAAACGAACGCACATACATATAGTTCGTCTGCCACAATAT TTTCACAATTTCAACCTGCATTTACGTACACTTTTCTCGGGGGTGGGGAG GTTGTTTCGAATTCCACTAAAGACACCGGCAAGCGCCCAGTCTCTAGGCG CGTCTTTCTATGGAAAGCGATTTGTATGTTTTTGTTCCATCTTGTCGTAA TCACAAAATAACTGGAAATGTTTGTTCGCTTTTTCCAGCGATTTTCACCC GTATGTATGTGTAGCTATGTTGTCTTCATATTAAAAACCGTTCCGATCTC TCCATCCAGTACCTCTCAATGTCCGTAAATACTAATCCAACACCTGATGC GGTCGATTCCCGTGGTCACAGGCTAACTTATTCCCAAGGAACGGTACACG TAAAATAAAATGGACACGAAGGGCCAGCAAAGCAACAATAAAACTGATAT CGAATCTAGAGCCCTCCGCTCCCCTCTACTTGTACACGCTATGTGAGGTA AAAACAAAATTGAAACAAAGCCTACACCACTATCTTGGTACCCCAACAAA GCTGGGGGGTTCCGCGCCGGGTTCTCGCCGGTCAGGCCATACAGGTCTAC ATAGTCCTCACCCATATTATACCGCCACCAACAGGGGGTAAAAATAACAA CGAAAATAAAAATAGGGAGTTTGCGAAAGTCAATTTTTGCTATCACTTTT TGGTTCGGGGGAACTTTAACCGCCAAAAATACTCAAAACTCCCTCAACAT TTGGCCAAATGTGCGTAATTTACCAACATTTGCCATCAATATTTGACAAT GGAGAGTCAGCGTCGCAGTTGCACTTTCCAGCGCGCGGTGGTTGGTCCAG ACTTCTTCCGAGAGCACTGTGGTTGGTCGAAAGATACCGGCTGCGGCATA TGACATCAGTCAGCGTTTCTGACTGCAGAGAACGCGCGGGGCAGCTCATG CACTGCACTCACTCGTCGATAGATGGCCCAAAGAAAATCTATCCATACGT GAGAAGTGCAACCCAAACGAAGTGCAACCCAAACGTTGATATAGTCTATA TGGAGCAATGACTGCTGATGGTGAGTTGCTGAAAGAGGAATACATAATTA AAGTGGTAGCAGCTTGCTTGGCGCCGCGTCGATGGAGACGAGGCGAAGAG AGAGAGGACAAGGTAATTAATATTACAGGAATCGGGATCTTTAGGACTGG GTCGCTGAGAGCGCAGCGGCTTGATTAGACCCTCTCTGTCAACAGTATAT TAACTTCGTGCCCTCATAGCGCGCGCCCAGACGCACGGCGAGACCCGCGC CTTGGCACGGTGGCACCTTGGCGTAGCGAACAGAATGACCCATCCGCGCG ATCCCGATTGGATGCGTTGGCGCGGGCTCCGTGTGTCGTCAATGCAGGTT CAAAGCTGCAAACCAAAGTCAAATGGGCGACAGTCAGTCCCGTTTTGCAG GTTCTGGATGTTTATTTGATAAACTGCCACAAAAGTTCCACACCTGTCTT TGCTCCGACATCACGCACACAGAATCAACAACCCCTGGCTAGACATGAGT GCGCTATTGAAGGCTTCGCCTCTGAAACGCAAATCAGAGGGCGACGTCAC CGGTGCGCCGGGGACTTTTTTCGCACGGCGATTTTTTTTGCAGCGCGGCA TCGGAAGACAGTGCCGTGGCTACTTTTCCTCTCAATCCACCGGACAACAG CAACCAAGGTCACTAGGTAGTGCTGCTGTGTATCGTTACATTGGATGGTG GTGTGATGATGCATTCAGCAAGAGGCCCATCAGAGTAAAATACACAAGAT ATGGAAGTAGACTCTACATAGAGTGGAGCACTTCTCCGAAGTTTTTAGAT ATTACTTCTAGATATTGTCTATACACATGTATGTGTGCCCTATCTTCGCC TCGCGCCAGAACATGCGACACACACCTACAAAAAAAACATATTTTATTAT CGAGATGTCTTTCCGATTAAATACAATTCTACCGCCCTTGGTATTCAGCC TACCCCGGCACCAACACCTCATCCCTTTCACAGTCACTGAGAGGACGGGG GGGCCGATAGGCCCCCCACGTCCGGAGACTCTTGTATGTTACTATTTTTG ATACTCACCCGGTGCGTGTGCTTGTGGGATCTGCTGACAGGGACTTCCGA CGAGAAGTAGCCAATAGCTTCGCTATGGACGTGGCGAGCAACTTACTTTC CTGTATTTACAGGAGCGGGTACGACATCTCCGTTCCGCTTGCCCCCAAGA AGCACTTCCATTACCTGGCTGAGATTGCTCCCTTGGATCGGGCCTTTTTC CTTACGTTCAAGGTAGATACATACAAGCACGAGCTACCGTTTACCACCAG TTCTTGTTCTGGGTAGCCTCCACCAATCCCCCACTCTCAACTAGGCCCGT TTGAAGCTCGCTTCGTAGATCAAACAAATACCCGCTACTCTATTAGAAGT CCAGGCTGTGTTGCCGGGTGATCTCGTCATGTGCTTGGTTGGCTTGTCGT GGCGCATGTACACGTTCTCTTATTATCTCGCAGTGACGGAGCACGTTGAT GTTGTAGTAGTGCCGCTTCTGGGACTTGTTCTTGCATCTGCGAGCCATGC TTAGTCTTATTTGTGACCAAGGTAGAAAGGTTGCGATAGCTGGGGAGTGG GAGAGCTGGGCTCTCTCTTCCTCTGATCTCGCTATAACTATCACTTCGTA TAAATGTATGTAGACTAGTATACAGTTGTAGGTTCTAATCGATCATCAAC TCACTCATTGTAGCTGTTCGGTGCAATGCCAACCGTCACTCGTTACACCG CAACGTGCAACTCACAGATTTGTGTACTGCGCCGTATTCAACATCCTAAT ATACCTTAACATGCAGGGTTCCGCCTACCTCACGGGACACGGGTCGGAGG AGCGAATGAGCCTTGTGCCACTTCTCCACGACGAGGAAAATGGGGCGGTC ATGTCCGTGCACTGTTTCGAGGTTCACGGCGAGCAGCTCTTACCCCAGAA CGTTGAGTATTGCCAATCGCTCAAGAGTCACCACTACGACTACGAGTACG CCACCCTGATGAACACGACCTTCGGACTGGTTCCGTCAGGCCGATCTCCG GGCACATACCGACTCGCTGAGGTCATGGGCGCCGGAGCAATCCCCGTGAT CATCGCCAGAGACTATGTTCTTCCGTTTCGAGAGCATTTCGATTGGTCGT CATTTTCCTTCATGTTTTCCCCGGACCAGGTCGGTCCCCACATGATGAAG ATTCTGCGGGCGACCCCCCAGGTGCAGCTGGAGGAAATGCAGGTGCGTTC G
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig55:10611..14861-

>mRNA_L-elsbetiae_contig55.13765.1 ID=mRNA_L-elsbetiae_contig55.13765.1|Name=mRNA_L-elsbetiae_contig55.13765.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1680bp|location=Sequence derived from alignment at L-elsbetiae_contig55:10611..14861- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGCAGCCAACGGCAGTAGGCTTGGCGAGGAAAAGGACGATTCACA
CTACATGGGTTGGGTTTTCCGCAATGCTGCTCGAGAGGCTGGTGTGCTGG
CTGAATCGTACGAAAGCGCGTGCATCATCATGCACGTCAGCAGAGGGGGT
GGGCGGGGCGAGTGCGCATCGCGCTCTCCTCTTTGGAACAACGGCACCAA
CCACGTCATGGTGAACTTCGGTGACAGGGGGAGGTCAGTTGGCGATGATG
CTGGCAGCCAACGGCAGTAGGCTTGGCGAGGAAAAGGACGATTCACACTA
CATGGGTTGGGTTTTCCGCAATGCTGCTCGAGAGGCTGGTGTGCTGGCTG
AATCGTACGAAAGCGCGTGCATCATCATGCACGTCAGCAGAGGGGGTGGG
CGGGGCGAGTGCGCATCGCGCTCTCCTCTTTGGAACAACGGCACCAACCA
CGTCATGGTGAACTTCGGTGACAGGGGGAGGTCAGTTGGCGATGAAGTAG
CCAATAGCTTCGCTATGGACGTGGCGAGCAACTTACTTTCCTGTATTTAC
AGGAGCGGGTACGACATCTCCGTTCCGCTTGCCCCCAAGAAGCACTTCCA
TTACCTGGCTGAGATTGCTCCCTTGGATCGGGCCTTTTTCCTTACGTTCA
AGAAGTAGCCAATAGCTTCGCTATGGACGTGGCGAGCAACTTACTTTCCT
GTATTTACAGGAGCGGGTACGACATCTCCGTTCCGCTTGCCCCCAAGAAG
CACTTCCATTACCTGGCTGAGATTGCTCCCTTGGATCGGGCCTTTTTCCT
TACGTTCAAGGGTTCCGCCTACCTCACGGGACACGGGTCGGAGGAGCGAA
TGAGCCTTGTGCCACTTCTCCACGACGAGGAAAATGGGGCGGTCATGTCC
GTGCACTGTTTCGAGGTTCACGGCGAGCAGCTCTTACCCCAGAACGTTGA
GTATTGCCAATCGCTCAAGAGTCACCACTACGACTACGAGTACGCCACCC
TGATGAACACGACCTTCGGACTGGTTCCGTCAGGCCGATCTCCGGGCACA
TACCGACTCGCTGAGGTCATGGGCGCCGGAGCAATCCCCGTGATCATCGC
CAGAGACTATGTTCTTCCGTTTCGAGAGCATTTCGATTGGTCGTCATTTT
CCTTCATGTTTTCCCCGGACCAGGTCGGTCCCCACATGATGAAGATTCTG
CGGGCGACCCCCCAGGTGCAGCTGGAGGAAATGCAGGTGCGTTCGGGTTC
CGCCTACCTCACGGGACACGGGTCGGAGGAGCGAATGAGCCTTGTGCCAC
TTCTCCACGACGAGGAAAATGGGGCGGTCATGTCCGTGCACTGTTTCGAG
GTTCACGGCGAGCAGCTCTTACCCCAGAACGTTGAGTATTGCCAATCGCT
CAAGAGTCACCACTACGACTACGAGTACGCCACCCTGATGAACACGACCT
TCGGACTGGTTCCGTCAGGCCGATCTCCGGGCACATACCGACTCGCTGAG
GTCATGGGCGCCGGAGCAATCCCCGTGATCATCGCCAGAGACTATGTTCT
TCCGTTTCGAGAGCATTTCGATTGGTCGTCATTTTCCTTCATGTTTTCCC
CGGACCAGGTCGGTCCCCACATGATGAAGATTCTGCGGGCGACCCCCCAG
GTGCAGCTGGAGGAAATGCAGGTGCGTTCG
back to top