mRNA_L-elsbetiae_contig5496.13759.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Match: D8LM84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM84_ECTSI) HSP 1 Score: 199 bits (507), Expect = 5.990e-55 Identity = 119/137 (86.86%), Postives = 120/137 (87.59%), Query Frame = 1 Query: 13 RPKTKQATRSASAYLVLSLCERAPLEIHRAAPRLLPTLTNTALSERSSTLRRTYSSALSSVARLAPAAGVSRLASRLAQLFREADPDFDKRQRRTLALLLGDLCRRAGGQLGAPGGGGSDPPGGVRGEQRPGQAGRA 423 R T ATRSASAYLVLSLCERAPLEIHRAAPRLLPTLTNTALSERSSTLRRTYSSALSSVARLAPAAGVSRLASRLAQLFREADPDFDKRQRRTLALLLGDLCRRAGGQLGAPGG GGV+ E G G A Sbjct: 1689 RSGTGLATRSASAYLVLSLCERAPLEIHRAAPRLLPTLTNTALSERSSTLRRTYSSALSSVARLAPAAGVSRLASRLAQLFREADPDFDKRQRRTLALLLGDLCRRAGGQLGAPGG--KAATGGVKEEGASGGGGFA 1823
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Match: A0A836CAR0_9STRA (Proteasome stabiliser-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR0_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.650e-12 Identity = 58/146 (39.73%), Postives = 72/146 (49.32%), Query Frame = 2 Query: 329 GPAGSWERPAAAAVILPVAFVASSDPDRPVAQAFEEAWQEGLQQLQLGAAG--------------QGEA----FRLPDILAEVSRAVSTVSRVTKRQGCSGLKDLARILGPSLGEESSGRRLIRRVLEQVLGRTWEGKEELLEAVV 712 G G W R AA LP+A+VA D D VA AF W EGL QLQLGAAG +GEA L I AE+ A+ SR + + + G LGE+++G ++ +L V GR WE KE LLEAVV Sbjct: 1913 GSEGEWRRSGWAAA-LPLAYVARHDADAAVAAAFATVWDEGLTQLQLGAAGXXXXXXXXXXXXSVRGEAGACALLLAPIAAEIVGALGGTSRGGRLRAAAAXXXXXXXXGARLGEDAAGAEVLGALLRAVPGRAWERKEALLEAVV 2057
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Match: A0A7S3XZ13_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ13_HETAK) HSP 1 Score: 76.3 bits (186), Expect = 3.140e-12 Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 34 TRSASAYLVLSLCERAPLEIHRAAPRLLPTLTNTALSER-SSTLRRTYSSALSSVARLAPAAGVSRLASRLAQLFREADP-DFDKRQRRTLALLLGDLCRRAGGQL 345 TRSASAYLVL+LCER+P E+ R + LL L +AL+ER S+TLR + A+ SVARLA V RLA RL +L+R +D D + ++ LL LC RA Q+ Sbjct: 267 TRSASAYLVLNLCERSPREVGRRSSALLQQLAASALAERRSATLRSALAGAMGSVARLASPFDVGRLARRLVRLYRASDSFSMDSTHKLSVMQLLSSLCLRASSQV 372
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Match: A0A2J6JHI8_LACSA (Uncharacterized protein n=5 Tax=Asteraceae TaxID=4210 RepID=A0A2J6JHI8_LACSA) HSP 1 Score: 58.2 bits (139), Expect = 4.420e-6 Identity = 34/119 (28.57%), Postives = 67/119 (56.30%), Query Frame = 2 Query: 365 AVILPVAFVASSDPDRPVAQAFEEAWQEGLQQLQLGAAGQGEAFRLPDILAEVSRAVSTVSRVTKRQGCSGLKDLARILGPSLGEESSGRRLIRRVLEQVLGRTWEGKEELLEAVVALC 721 A ++PV F++ + D+ V+ +EE W+E + +L + +I+ +++ +++ S +KR+ + L +L SL S + L+ ++ ++ GR WEGKE+LLEA+ +LC Sbjct: 1442 ATVVPVIFLSRFEDDKNVSSLYEELWEENMTSERLTL-----QLYVSEIVTLITQGIASSSWASKRKAAKAIVKLCEVLDESLF--SYHQVLLTSLMNEIPGRIWEGKEDLLEALSSLC 1553
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Match: A0A251T7Y0_HELAN (Putative ARM repeat superfamily protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T7Y0_HELAN) HSP 1 Score: 57.8 bits (138), Expect = 5.950e-6 Identity = 33/119 (27.73%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 365 AVILPVAFVASSDPDRPVAQAFEEAWQEGLQQLQLGAAGQGEAFRLPDILAEVSRAVSTVSRVTKRQGCSGLKDLARILGPSLGEESSGRRLIRRVLEQVLGRTWEGKEELLEAVVALC 721 A ++PV F++ + D+ V++ +E+ W+E + +L + +I+ ++ +++ S +KR+ + L +L S+ S + L+ ++++V GR WEGKE++LEA+ ALC Sbjct: 1447 ATVVPVIFLSRFEDDKNVSRLYEDLWEENMTSERLTL-----QLYIGEIVTLITEGIASSSWASKRKAAKAIVKLCEVLEESVS--SYHQVLLTSLMKEVPGRIWEGKEDILEALSALC 1558
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Match: A0A139A7K3_GONPJ (ARM repeat-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A7K3_GONPJ) HSP 1 Score: 57.4 bits (137), Expect = 8.040e-6 Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 2 Query: 374 LPVAFVASSDPDRPVAQAFEEAWQEGLQQLQLGAAGQGEAFRL--PDILAEVSRAVSTVSRVTKRQGCSGLKDLARILGPSLGEESSGRRLIRRVLEQVLGRTWEGKEELLEAV 709 LP+ F D D+ V++ ++E W+E AG RL ++ V +++ S KRQ + + +L++ILGP L ++ LI + E + GRTWEGKE LLEA+ Sbjct: 1574 LPLVFYGMHDSDKTVSEIWKEVWEENT-------AGSSSTLRLYLDELTTLVVPLLTSQSWGLKRQAGATIAELSKILGPILNSKAPV--LIPSLTESLYGRTWEGKEALLEAL 1678
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Match: D8SK23_SELML (FHA domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SK23_SELML) HSP 1 Score: 57.0 bits (136), Expect = 1.060e-5 Identity = 38/122 (31.15%), Postives = 64/122 (52.46%), Query Frame = 2 Query: 362 AAVILPVAFVASSDPDRPVAQAFEEAWQEGLQQLQLGAAGQGEAFRLP--DILAEVSRAVSTVSRVTKRQGCSGLKDLARILGPSLGEESSGRRLIRRVLEQVLGRTWEGKEELLEAVVALC 721 A ++LPVAF+ D ++ V FEE W+E + Q A +L +I+ + ++T S K+Q + + G + E ++L++ +L ++ GRTWEGKE + EA+ ALC Sbjct: 1460 ATLVLPVAFIGRFDEEKSVRSDFEEVWEENT-------SSQTVALQLYMLEIMPLLLDGLATSSWTRKQQSAKAVIKAVEVTGEAA--EPFAQQLMKSLLNELRGRTWEGKECIFEAISALC 1572
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Match: A0A4P9VYP3_9FUNG (Armadillo-type protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VYP3_9FUNG) HSP 1 Score: 55.5 bits (132), Expect = 2.840e-5 Identity = 38/119 (31.93%), Postives = 62/119 (52.10%), Query Frame = 2 Query: 365 AVILPVAFVASSDPDRPVAQAFEEAWQEGLQQLQLGAAGQGEAFRLPDILAEVSRAVSTV-SRVTKRQGCSGLKDLARILGPSLGEESSGRRLIRRVLEQVLGRTWEGKEELLEAVVAL 718 AV+LP+A++ + D D + + +AW+E GAA L +++ V + T S KRQ L D+A +G + E R IR +L+ + GRTW+GKE ++EA+ + Sbjct: 356 AVLLPLAYLGARDVDPAIKAVWVDAWEEST----AGAAAGAVRLWLAELVDAVQVLIGTTPSWGVKRQVAVALADMASSIGTAF--EPQMERAIRMLLDALAGRTWDGKESVVEALATV 468
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Match: S4PJU4_9NEOP (Proteasome-associated protein ECM29-like protein n=1 Tax=Pararge aegeria TaxID=116150 RepID=S4PJU4_9NEOP) HSP 1 Score: 55.5 bits (132), Expect = 3.160e-5 Identity = 38/121 (31.40%), Postives = 61/121 (50.41%), Query Frame = 2 Query: 368 VILPVAFVASSDP---DRPVAQAFEEAWQEGLQQLQLGAAGQGEAFRLPDILAEVSRAVSTVSRVTKRQGCSGLKDLARILGPSLGEESSGRRLIRRVLEQVLGRTWEGKEELLEAVVALC 721 ++ PV F+A P D ++FEE W + + G LPDI A + +A+ + S K Q + +K + + + LGEE IR +L V G+T++GK+ +LEA+ LC Sbjct: 492 ILAPVVFLAMHAPKEDDSTTVESFEEIWSDMSPTRESGI-----RQHLPDIRAYIEQALVSGSWTKKIQAANAIKTICKEMASGLGEEREP--FIRSLLAAVQGKTFDGKQHILEAMADLC 605
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Match: W1NQC6_AMBTC (Uncharacterized protein n=4 Tax=Amborella trichopoda TaxID=13333 RepID=W1NQC6_AMBTC) HSP 1 Score: 55.5 bits (132), Expect = 3.500e-5 Identity = 37/119 (31.09%), Postives = 60/119 (50.42%), Query Frame = 2 Query: 365 AVILPVAFVASSDPDRPVAQAFEEAWQEGLQQLQLGAAGQGEAFRLPDILAEVSRAVSTVSRVTKRQGCSGLKDLARILGPSLGEESSGRRLIRRVLEQVLGRTWEGKEELLEAVVALC 721 A ILPV FV ++ V+ FEE W+E ++ L +I+ + +++ S KR+ + LA +L +L L+ +L+++ GR WEGKEE+L A+ ALC Sbjct: 1446 ATILPVVFVERFGDEKDVSSQFEELWEEIASSERITL-----ELYLSEIVLLICNCLTSSSWPNKRKSAKAITRLAEVLVETLSLFHKD--LLNNLLKELPGRLWEGKEEILHAIAALC 1557 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5496.13759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5496.13759.1 >prot_L-elsbetiae_contig5496.13759.1 ID=prot_L-elsbetiae_contig5496.13759.1|Name=mRNA_L-elsbetiae_contig5496.13759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=242bp LLSARPKTKQATRSASAYLVLSLCERAPLEIHRAAPRLLPTLTNTALSERback to top mRNA from alignment at L-elsbetiae_contig5496:10195..11781- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5496.13759.1 ID=mRNA_L-elsbetiae_contig5496.13759.1|Name=mRNA_L-elsbetiae_contig5496.13759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1587bp|location=Sequence derived from alignment at L-elsbetiae_contig5496:10195..11781- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5496:10195..11781- >mRNA_L-elsbetiae_contig5496.13759.1 ID=mRNA_L-elsbetiae_contig5496.13759.1|Name=mRNA_L-elsbetiae_contig5496.13759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1452bp|location=Sequence derived from alignment at L-elsbetiae_contig5496:10195..11781- (Laminarionema elsbetiae ELsaHSoW15)back to top |