mRNA_L-elsbetiae_contig5473.13735.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Match: D8LBT3_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT3_ECTSI) HSP 1 Score: 202 bits (514), Expect = 1.430e-58 Identity = 115/193 (59.59%), Postives = 124/193 (64.25%), Query Frame = 2 Query: 647 RGPAERLALLPLPWFRCGFVPPATKESCRRVHTEAAGGFGGSNASFYEKSRPGYPAQALRAIEAEIRRGGCIRRVESGSSDGNDIVDLGCGTGKFTREILPFARSEGLSLVGVEPVKAMRDQFEAALPGVRVIEGTGEAIPVPDSSARALIAAQSFHWMSSPATLRQVHRVLVPGSLFALVWNTRDYTVPWVR 1225 RG A ALL R FVPP+TK R VHTEA GGFGG+NASFYE +RPGYPA ALRAIEAEIRR G + G +VDLG GTGKFTR ILPFA SEG GEAIP+PDSSARAL+A QSFHWMSS ATLR+VHRVLVPG LF L+WNTRD T PWVR Sbjct: 2 RGQARLSALLSR--VRPPFVPPSTKAG-RWVHTEAVGGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGL-------TGSGELLVDLGAGTGKFTRNILPFALSEG----------------------------AGEAIPIPDSSARALVAPQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVR 156
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Match: UPI001B32B7EE (methyltransferase domain-containing protein n=1 Tax=Pseudomonas sp. Tri1 TaxID=2823875 RepID=UPI001B32B7EE) HSP 1 Score: 183 bits (464), Expect = 6.090e-50 Identity = 110/283 (38.87%), Postives = 152/283 (53.71%), Query Frame = 2 Query: 770 SNASFYEKSRPGYPAQALRAIEAEIRRGGCIRRVESGSSDGNDIVDLGCGTGKFTREILPFARSEGLSLVGVEPVKAMRDQFEAALPGVRVIEGTGEAIPVPDSSARALIAAQSFHWMSSPATLRQVHRVLVPGSLFALVWNTRDYTVPWVRALEDIIDPFYGDDVPRQHGGTWRQSFRDLEQSSDGGKETGGDGRQRRSFFG--ELTEQHFKHSQLLTPDELDDRMRSISVIATRPEPERAEASRRARELVETHPDTQQELRKSGRVELFYDTEVYWCRKLD 1612 S A+ Y RP YPA+ + E+ G G+ ++DLG GTGKFTR +S G+ +V VEPV+AMR +F +LP V ++EGT E IP +A+AL+ AQ+FHW ++ L ++HRVL P L+WN RD TV WV A+ DII P+ GD PR H G WR F TG ++F ELT + HS + + DR S+S IA P ERA+ + + ++L++THP LR +E Y T+ Y CR+LD Sbjct: 14 SQANTYAAGRPSYPAELSTWLTKEL-----------GVLPGSAVIDLGAGTGKFTR----LLKSMGIDVVAVEPVEAMRTEFAKSLPDVGIVEGTAECIPFGSGTAQALVCAQAFHWFANEKALAEIHRVLRPNGRLGLIWNVRDETVDWVAAITDIITPYEGD-APRFHTGAWRSPF------------TG-------NYFSAPELTCFQYTHSGT-AKEVIIDRFLSVSFIAALPPAERAKVTEQLQQLIDTHPS----LRGREIIEFPYQTQAYACRRLD 256
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Match: W8PVT5_9PSED (SAM-dependent methyltransferase n=1 Tax=Pseudomonas brassicacearum TaxID=930166 RepID=W8PVT5_9PSED) HSP 1 Score: 182 bits (462), Expect = 1.180e-49 Identity = 107/281 (38.08%), Postives = 152/281 (54.09%), Query Frame = 2 Query: 770 SNASFYEKSRPGYPAQALRAIEAEIRRGGCIRRVESGSSDGNDIVDLGCGTGKFTREILPFARSEGLSLVGVEPVKAMRDQFEAALPGVRVIEGTGEAIPVPDSSARALIAAQSFHWMSSPATLRQVHRVLVPGSLFALVWNTRDYTVPWVRALEDIIDPFYGDDVPRQHGGTWRQSFRDLEQSSDGGKETGGDGRQRRSFFGELTEQHFKHSQLLTPDELDDRMRSISVIATRPEPERAEASRRARELVETHPDTQQELRKSGRVELFYDTEVYWCRKLD 1612 S A Y K RP YP++ +E E+ G G+ ++DLG GTGKFTR ++ L +V VEPV+AMR +F +LP VR++EGT E+IP +A+AL+ AQ+FHW ++ L ++HRVL P L+WN RD +V WV A+ DII P+ GD PR H G WR F + S+ ELT + HS + + DR S+S IA P E+A+ S + ++L++THP LR ++ Y T+ Y CR+LD Sbjct: 14 SQAHTYAKGRPDYPSELRAWLEEEL-----------GLVPGSAVIDLGAGTGKFTR----LLKAMELDVVAVEPVEAMRAEFAKSLPDVRMVEGTAESIPFGSGTAQALVCAQAFHWFANERALAEIHRVLRPNGRLGLIWNVRDESVDWVAAITDIITPYEGD-TPRFHTGAWRSPFAGNDFSTP-----------------ELTCFQYTHSGT-AKEVIMDRFLSVSFIAALPVAEKAKVSDQLQDLIDTHPS----LRGRDTIDFPYQTQAYLCRRLD 256
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Match: A0A329I8R9_9PSED (SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. RIT 412 TaxID=2202161 RepID=A0A329I8R9_9PSED) HSP 1 Score: 181 bits (460), Expect = 2.360e-49 Identity = 116/294 (39.46%), Postives = 153/294 (52.04%), Query Frame = 2 Query: 737 VHTEAAGGFGGSNASFYEKSRPGYPAQALRAIEAEIRRGGCIRRVESGSSDGNDIVDLGCGTGKFTREILPFARSEGLSLVGVEPVKAMRDQFEAALPGVRVIEGTGEAIPVPDSSARALIAAQSFHWMSSPATLRQVHRVLVPGSLFALVWNTRDYTVPWVRALEDIIDPFYGDDVPRQHGGTWRQSFRDLEQSSDGGKETGGDGRQRRSFFG--ELTEQHFKHSQLLTPDELDDRMRSISVIATRPEPERAEASRRARELVETHPDTQQELRKSGRVELFYDTEVYWCRKLD 1612 VH A GF + A+ Y + RP YP + G R G D +VDLG GTGKFTR + P L+ VEPV+AMR +F LP + VI+GT +++P+ D S AL+ AQ+FHW + L ++HRVLVPG LVWN RD +V WV + II P+ GD PR H G WR+ F+D FG ELT ++ HS + +R S+S IA PE E+AE + + REL++THP LR VE Y T+ Y CR+LD Sbjct: 4 VHNAAQVGFS-TQAATYTQGRPDYPDEL-----------GHWLRHTLGIDDQRSVVDLGAGTGKFTRLLEPLTER----LIAVEPVEAMRREFARGLPRIAVIDGTAQSLPLADGSVDALVCAQAFHWFADDTALAEIHRVLVPGGRLGLVWNVRDESVDWVAEITRIITPYEGD-TPRFHTGQWRRPFQDSH------------------CFGQPELTCFNYHHSGS-AETVIMNRFLSVSFIAALPEAEKAEVTAQLRELIQTHPA----LRGREVVEFPYQTQAYLCRRLD 257
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Match: A0A0H5A4Q5_9PSED (SAM-dependent methyltransferase n=11 Tax=Pseudomonas TaxID=286 RepID=A0A0H5A4Q5_9PSED) HSP 1 Score: 177 bits (450), Expect = 6.300e-48 Identity = 110/292 (37.67%), Postives = 152/292 (52.05%), Query Frame = 2 Query: 737 VHTEAAGGFGGSNASFYEKSRPGYPAQALRAIEAEIRRGGCIRRVESGSSDGNDIVDLGCGTGKFTREILPFARSEGLSLVGVEPVKAMRDQFEAALPGVRVIEGTGEAIPVPDSSARALIAAQSFHWMSSPATLRQVHRVLVPGSLFALVWNTRDYTVPWVRALEDIIDPFYGDDVPRQHGGTWRQSFRDLEQSSDGGKETGGDGRQRRSFFGELTEQHFKHSQLLTPDE-LDDRMRSISVIATRPEPERAEASRRARELVETHPDTQQELRKSGRVELFYDTEVYWCRKL 1609 VH A GF + A Y + RP YP Q + +R +++ S+ ++DLG GTGKFTR + A + L+ VEPV AM Q LPGVR++ GT E+IP+ SA AL+ AQ+FHW S+ A L ++HRVL P LVWN RD V WV A+ +II P+ GD PR H G WR++F ++F E F +S + +P E + DR S+S IA P E+A + + R L++THPD LR + Y T+ Y C +L Sbjct: 4 VHASAQQGFS-TQAVTYAQGRPNYPRQLTGWLTETLR-------IDAQST----VIDLGAGTGKFTRLLSSLAPT----LIAVEPVAAMGAQLAKLLPGVRLVSGTAESIPLASGSADALVCAQAFHWFSTQAALAEIHRVLKPEGRLGLVWNVRDEAVGWVAAITEIITPYEGD-TPRFHTGLWREAF-------------------NGAYFSEPEVTRFPYSHVGSPQEVIMDRFLSVSFIAALPAAEKANVTAQLRTLIDTHPD----LRGRDTIAFPYQTQAYICHRL 255
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Match: A0A5E6U8X7_PSEFL (Putative methyltransferase n=9 Tax=Pseudomonas TaxID=286 RepID=A0A5E6U8X7_PSEFL) HSP 1 Score: 177 bits (450), Expect = 6.300e-48 Identity = 107/281 (38.08%), Postives = 149/281 (53.02%), Query Frame = 2 Query: 770 SNASFYEKSRPGYPAQALRAIEAEIRRGGCIRRVESGSSDGNDIVDLGCGTGKFTREILPFARSEGLSLVGVEPVKAMRDQFEAALPGVRVIEGTGEAIPVPDSSARALIAAQSFHWMSSPATLRQVHRVLVPGSLFALVWNTRDYTVPWVRALEDIIDPFYGDDVPRQHGGTWRQSFRDLEQSSDGGKETGGDGRQRRSFFGELTEQHFKHSQLLTPDELDDRMRSISVIATRPEPERAEASRRARELVETHPDTQQELRKSGRVELFYDTEVYWCRKLD 1612 S AS Y K RPGYP + + + G G+ ++DLG GTGKFTR +S + +V VEPV+AMR +F +LP +R+++GT E IP + +AL+ AQ+FHW ++ L ++HRVL P L+WN RD +V WV A+ DII P+ GD PR H G WR F TG R ELT + HS + + DR+ S+S IA P E+A+ + + + L+ETHP LR +E Y T+ Y CR+LD Sbjct: 14 SQASTYAKGRPGYPIELHTWLREVL-----------GILPGSTVIDLGAGTGKFTR----LLKSLEIDVVAVEPVEAMRTEFAKSLPDIRILDGTAECIPFGSETTQALVCAQAFHWFANERALAEIHRVLKPNGRLGLIWNVRDESVDWVAAITDIITPYEGD-TPRFHTGFWRLPF------------TG-----RHFSTPELTCFRYTHSGS-AKEVIIDRILSVSFIAALPPAEKAKVTEQLQNLIETHPF----LRGRETIEFPYQTQAYLCRRLD 256
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Match: UPI0019141BBC (class I SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. TH03 TaxID=2796369 RepID=UPI0019141BBC) HSP 1 Score: 177 bits (448), Expect = 1.220e-47 Identity = 110/293 (37.54%), Postives = 156/293 (53.24%), Query Frame = 2 Query: 737 VHTEAAGGFGGSNASFYEKSRPGYPAQALRAIEAEIRRGGCIRRVESGSSDGNDIVDLGCGTGKFTREILPFARSEGLSLVGVEPVKAMRDQFEAALPGVRVIEGTGEAIPVPDSSARALIAAQSFHWMSSPATLRQVHRVLVPGSLFALVWNTRDYTVPWVRALEDIIDPFYGDDVPRQHGGTWRQSFRDLEQSSDGGKETGGDGRQRRSFFGELTEQHFKHSQLLTPDE-LDDRMRSISVIATRPEPERAEASRRARELVETHPDTQQELRKSGRVELFYDTEVYWCRKLD 1612 VH A GF + AS Y RP YPA ++A +R G + ++DLG GTGKFTR +S G+ +V +EPV+AMR +F LP VR++EGT E+IP+ +A+AL+ AQ+FHW ++ L ++HRVL P L+WN RD +V WV A+ DII P+ GD PR H G WR+ F GR +F + F ++Q + E + DR S+S IA P E+A+ + + L++THP LR +E Y T+ Y C +LD Sbjct: 4 VHKTAQLGFS-TEASTYAHGRPDYPAD----LKAWLRE-------TLGIDPESTVIDLGAGTGKFTR----LLKSLGIDVVAIEPVEAMRTEFAKNLPDVRILEGTAESIPLESGTAQALVCAQAFHWFATEPALAEIHRVLKPNGRLGLIWNVRDESVDWVAAITDIITPYEGD-TPRFHNGNWRRPFI---------------GR----YFSDPEVTCFPYTQTGSAQEVIIDRFMSVSFIAALPPAEKAKVVEQLQALIQTHPS----LRGRETIEFPYQTQAYVCHRLD 256
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Match: A0A7V7E654_9PROT (Class I SAM-dependent methyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7E654_9PROT) HSP 1 Score: 176 bits (447), Expect = 1.700e-47 Identity = 116/294 (39.46%), Postives = 148/294 (50.34%), Query Frame = 2 Query: 737 VHTEAAGGFGGSNASFYEKSRPGYPAQALRAIEAEIRRGGCIRRVESGSSDGNDIVDLGCGTGKFTREILPFARSEGLSLVGVEPVKAMRDQFEAALPGVRVIEGTGEAIPVPDSSARALIAAQSFHWMSSPATLRQVHRVLVPGSLFALVWNTRDYTVPWVRALEDIIDPFYGDDVPRQHGGTWRQSFRDLEQSSDGGKETGGDGRQRRSFFGELTEQHFKHS-QLLTPDELDDRMRSISVIATRPEPERAEASRRARELVETHPDTQQELRKSGRVELF--YDTEVYWCRKL 1609 VH A+ GF A Y + RP YPA + ++ G S G +VDLG GTGKFTR +L + G + VEPV AMR QF PG V++GT EAIP+PD SA AL+ AQSFHW ++ L ++ RVL PG + LVWN RD TV WV ++ II PF G PR H G WRQ F ++G FG+L + F H Q L DR+ S+S IA PE + R THPD +G+ E+ Y TE + CR+L Sbjct: 4 VHEAASVGFS-IQAEAYRRGRPDYPAAVDGWLIGQL-----------GLSSGRSVVDLGAGTGKFTRRLL----ATGARVTAVEPVAAMRAQFVLTAPGTLVLDGTAEAIPLPDGSADALVCAQSFHWFANLVALSEIRRVLKPGGVLGLVWNVRDETVDWVASVGRIIQPFEGS-TPRYHKGDWRQLF-----PAEG--------------FGQLEQTVFPHGHQGAVEQVLIDRILSVSFIAALPESMHNLVAAELRHFAATHPDL------AGQKEIIFPYRTEAFCCRRL 255
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Match: A0A0Q4EK42_9PSED (SAM-dependent methyltransferase n=16 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A0Q4EK42_9PSED) HSP 1 Score: 176 bits (447), Expect = 1.850e-47 Identity = 112/292 (38.36%), Postives = 154/292 (52.74%), Query Frame = 2 Query: 737 VHTEAAGGFGGSNASFYEKSRPGYPAQALRAIEAEIRRGGCIRRVESGSSDGNDIVDLGCGTGKFTREILPFARSEGLSLVGVEPVKAMRDQFEAALPGVRVIEGTGEAIPVPDSSARALIAAQSFHWMSSPATLRQVHRVLVPGSLFALVWNTRDYTVPWVRALEDIIDPFYGDDVPRQHGGTWRQSFRDLEQSSDGGKETGGDGRQRRSFFGELTEQHFKHSQLLTPDE-LDDRMRSISVIATRPEPERAEASRRARELVETHPDTQQELRKSGRVELFYDTEVYWCRKL 1609 VHT A GF + A+ Y + RP YP Q + + + +S ++DLG GTGKFTR + A S L+ VEPVKAM Q LP VR++ GT EA+P+PD+SA AL+ AQ+FHW S+ A L ++HRVL P LVWN RD +V WV A+ +II P+ GD PR H G WR++F TG +F F + + +P E + DR S+S IA P ++A + + R+L++THP LR V Y T+ Y C +L Sbjct: 4 VHTSAQQGFS-TQAATYAQGRPDYPRQLTGWLTNTL-----LINAQS------TVIDLGAGTGKFTRLLSTLAPS----LIAVEPVKAMGAQLSKLLPDVRLLSGTAEAMPLPDASADALVCAQAFHWFSTEAALAEIHRVLKPDGRLGLVWNVRDESVDWVAAITEIITPYEGD-TPRFHTGRWREAF------------TG-------EYFSAPQMSCFAYQHVGSPREVIMDRFLSVSFIAALPAAQKATVTEQLRQLIDTHPA----LRGRDTVAFPYQTQAYVCHRL 255
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Match: Q1I8Z5_PSEE4 (Methyltransf_11 domain-containing protein n=4 Tax=Pseudomonas entomophila TaxID=312306 RepID=Q1I8Z5_PSEE4) HSP 1 Score: 176 bits (446), Expect = 2.360e-47 Identity = 110/293 (37.54%), Postives = 157/293 (53.58%), Query Frame = 2 Query: 737 VHTEAAGGFGGSNASFYEKSRPGYPAQALRAIEAEIRRGGCIRRVESGSSDGNDIVDLGCGTGKFTREILPFARSEGLSLVGVEPVKAMRDQFEAALPGVRVIEGTGEAIPVPDSSARALIAAQSFHWMSSPATLRQVHRVLVPGSLFALVWNTRDYTVPWVRALEDIIDPFYGDDVPRQHGGTWRQSFRDLEQSSDGGKETGGDGRQRRSFFGELTEQHFKHSQLLTPDE-LDDRMRSISVIATRPEPERAEASRRARELVETHPDTQQELRKSGRVELFYDTEVYWCRKLD 1612 VH A+ GF + + YE+ RP YP A++ +R G +G ++DLG GTGKFTR + P A L VEPV AMR++F LP V V+EGT + +PV D+S + L+ AQ+FHW + A L ++HRVL PG LVWN RD +V WV + +II P+ GD PR H G WR++F DGR +F T H +P + +R+RS+S IA P+ E+ + R ++L++ HPD L+ R+ Y T+ Y C++LD Sbjct: 4 VHASASTGFTRQSGN-YEQGRPDYPI----ALQGWLRD-------TLGVGNGTTVLDLGAGTGKFTRLLTPLAPR----LTAVEPVAAMRERFHEQLPEVPVLEGTAQHMPVADASQQVLVCAQAFHWFADAAALAEMHRVLAPGGRLGLVWNVRDESVDWVARITEIITPYEGD-TPRFHTGRWREAF---------------DGR----WFSAPTLTTLPHVHEGSPQTVIIERLRSVSFIAALPQVEQDKVMARLQDLIDHHPD----LKGRERIAFPYQTQAYRCQRLD 256 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5473.13735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5473.13735.1 >prot_L-elsbetiae_contig5473.13735.1 ID=prot_L-elsbetiae_contig5473.13735.1|Name=mRNA_L-elsbetiae_contig5473.13735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=336bp MQSFCGRARGPAERLALLPLPWFRCGFVPPATKESCRRVHTEAAGGFGGSback to top mRNA from alignment at L-elsbetiae_contig5473:1510..5688+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5473.13735.1 ID=mRNA_L-elsbetiae_contig5473.13735.1|Name=mRNA_L-elsbetiae_contig5473.13735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4179bp|location=Sequence derived from alignment at L-elsbetiae_contig5473:1510..5688+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5473:1510..5688+ >mRNA_L-elsbetiae_contig5473.13735.1 ID=mRNA_L-elsbetiae_contig5473.13735.1|Name=mRNA_L-elsbetiae_contig5473.13735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2016bp|location=Sequence derived from alignment at L-elsbetiae_contig5473:1510..5688+ (Laminarionema elsbetiae ELsaHSoW15)back to top |