mRNA_L-elsbetiae_contig5470.13733.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Match: A0A6H5LEA9_9PHAE (DAO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEA9_9PHAE) HSP 1 Score: 126 bits (317), Expect = 1.010e-30 Identity = 80/109 (73.39%), Postives = 87/109 (79.82%), Query Frame = 3 Query: 171 MRHLKVLVLCSCAIGGPR---TSAFLLSVSSPAAGRSIRPLAMLGSTSSDVRIQKDVVVIGGGLAGLSTALELAKRGRQVTVVSRNRAEAAAEAAGGMIAPQAERLESG 488 MR L+ L +C CA+ G R + AFLLS GR R + MLGST SDVRI KDVVVIGGGLAGLSTALELAKRG+QVTV+SRNRAEAAAEAAGGMIAPQAERLESG Sbjct: 1 MRLLQQLSVC-CAVIGSRAWTSQAFLLS---SGVGRLSRSMVMLGSTISDVRIHKDVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESG 105
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Match: A0A7S4DFW4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFW4_HETAK) HSP 1 Score: 72.0 bits (175), Expect = 2.160e-13 Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 3 Query: 318 IQKDVVVIGGGLAGLSTALELA-KRGRQVTVVSRNRAEAAAEAAGGMIAPQAERL 479 IQ+DV+VIGGGLAGLS A ELA K GRQVTV+SR+ EAAA AA GM+APQAERL Sbjct: 55 IQRDVLVIGGGLAGLSVAYELASKHGRQVTVLSRDAEEAAARAAAGMLAPQAERL 109
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Match: W7U8T7_9STRA (Glycine oxidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8T7_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 3.710e-13 Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 3 Query: 327 DVVVIGGGLAGLSTALELAKRGRQVTVVSRNRAEAAAEAAGGMIAPQAERLESG 488 DV+VIGGGLAGLSTALEL++RG +V VVSR+ AE+A+ AAGGM+APQAERLE+G Sbjct: 79 DVLVIGGGLAGLSTALELSQRGAKVVVVSRDEAESASMAAGGMLAPQAERLEAG 132
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Match: A0A4D9DFC1_9STRA (DAO domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFC1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 3.980e-13 Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 3 Query: 327 DVVVIGGGLAGLSTALELAKRGRQVTVVSRNRAEAAAEAAGGMIAPQAERLESG 488 DV+VIGGGLAGLSTALEL++RG +V VVSR+ AE+A+ AAGGM+APQAERLE+G Sbjct: 11 DVLVIGGGLAGLSTALELSQRGAKVVVVSRDEAESASMAAGGMLAPQAERLEAG 64
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Match: A0A8J2WY37_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY37_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 9.310e-13 Identity = 49/88 (55.68%), Postives = 63/88 (71.59%), Query Frame = 3 Query: 225 TSAFLLSVSSPAAGRSIRPLAMLGSTSSDVRIQKDVVVIGGGLAGLSTALELAKRGRQVTVVSRNRAEAAAEAAGGMIAPQAERLESG 488 T F L V++ AA +RP ST+ + DVVV+GGG++GL+TALELA+RGR V VVSR+ A++A AAGGM+APQAERLE G Sbjct: 2 TLRFALLVTTAAA---LRPTQTRVSTTKKL----DVVVVGGGISGLATALELARRGRSVRVVSRDLAKSATLAAGGMLAPQAERLEEG 82
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Match: F0YGW8_AURAN (Mitogen-activated protein kinase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGW8_AURAN) HSP 1 Score: 71.2 bits (173), Expect = 2.210e-11 Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 3 Query: 258 AAGRSIRPLAMLGSTSSDVRIQKDVVVIGGGLAGLSTALELAKRGRQVTVVSRNRAEAAAEAAGGMIAPQAERLESG 488 AA R+ P A L S+++ DVVV+GGG++GLSTALEL +RGR V V+SR+ A+AA AAGGM+APQAERL G Sbjct: 14 AALRAPAPRASLRSSTA-----YDVVVVGGGMSGLSTALELRRRGRSVCVLSRDLAQAATLAAGGMLAPQAERLPGG 85
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Match: UPI0002483A50 (glycine oxidase ThiO n=1 Tax=Acaryochloris sp. CCMEE 5410 TaxID=310037 RepID=UPI0002483A50) HSP 1 Score: 65.5 bits (158), Expect = 1.720e-9 Identity = 34/54 (62.96%), Postives = 46/54 (85.19%), Query Frame = 3 Query: 327 DVVVIGGGLAGLSTALELAKRGRQVTVVSRNRAEAAAEAAGGMIAPQAERLESG 488 +V+VIGGGL GL+TA+ELA++G +VTV++R EAA ++A GM+APQAERL SG Sbjct: 6 EVLVIGGGLIGLATAVELAQQGVEVTVITRKLCEAATQSAAGMLAPQAERLSSG 59
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Match: R1BK16_EMIHU (DAO domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BK16_EMIHU) HSP 1 Score: 63.9 bits (154), Expect = 5.780e-9 Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 321 QKDVVVIGGGLAGLSTALELAKRGRQVTVVSRNRAEAAAEAAGGMIAPQAERLESG 488 ++ +V+GGG +GLS ALELA RG V+V+SR+ +E A AAGGM+APQAERLE G Sbjct: 1 RRSALVVGGGASGLSCALELAGRGWSVSVLSRDTSEGATRAAGGMLAPQAERLEEG 56
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Match: A0A8J7FBX8_9CYAN (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Plectonema cf. radiosum LEGE 06105 TaxID=945769 RepID=A0A8J7FBX8_9CYAN) HSP 1 Score: 60.1 bits (144), Expect = 9.110e-9 Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 3 Query: 327 DVVVIGGGLAGLSTALELAKRGRQVTVVSRNRAEAAAEAAGGMIAPQAERL 479 D+++IGGG+ GL+TA+EL RG +VT +SRN AAA AA GM+AP AER+ Sbjct: 4 DILIIGGGVIGLATAIELKLRGAKVTAISRNHKAAAATAAAGMLAPSAERI 54
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Match: A0A2T1CZ24_9CYAN (Thiazole synthase (Fragment) n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1CZ24_9CYAN) HSP 1 Score: 59.7 bits (143), Expect = 1.220e-8 Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 3 Query: 324 KDVVVIGGGLAGLSTALELAKRGRQVTVVSRNRAEAAAEAAGGMIAPQAERLES 485 KDVV++GGG+ GLS A+EL RG VTV+SR+ +AAA AA GM+AP AE + S Sbjct: 5 KDVVIVGGGIVGLSIAVELKLRGATVTVLSRDAQQAAAYAAAGMLAPAAENISS 58 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5470.13733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5470.13733.1 >prot_L-elsbetiae_contig5470.13733.1 ID=prot_L-elsbetiae_contig5470.13733.1|Name=mRNA_L-elsbetiae_contig5470.13733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp MRHLKVLVLCSCAIGGPRTSAFLLSVSSPAAGRSIRPLAMLGSTSSDVRIback to top mRNA from alignment at L-elsbetiae_contig5470:8893..9380+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5470.13733.1 ID=mRNA_L-elsbetiae_contig5470.13733.1|Name=mRNA_L-elsbetiae_contig5470.13733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=488bp|location=Sequence derived from alignment at L-elsbetiae_contig5470:8893..9380+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5470:8893..9380+ >mRNA_L-elsbetiae_contig5470.13733.1 ID=mRNA_L-elsbetiae_contig5470.13733.1|Name=mRNA_L-elsbetiae_contig5470.13733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=636bp|location=Sequence derived from alignment at L-elsbetiae_contig5470:8893..9380+ (Laminarionema elsbetiae ELsaHSoW15)back to top |