mRNA_L-elsbetiae_contig5458.13714.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Match: D7FXK0_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXK0_ECTSI) HSP 1 Score: 228 bits (582), Expect = 5.380e-70 Identity = 172/308 (55.84%), Postives = 193/308 (62.66%), Query Frame = 1 Query: 1 AGTAAWGCLILFGAPEDDSDTIRLVIVAVGAFIALLAMVSYLFTACTDPGIVFRHLA-------AAPH-PAAGGQQLQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEGKAVAG----WENDDFEAQQMLEILTEDYRDAVSTSQSAPVAPSDASAFAGGGRNGNNSGKVRGVLLAGLPPEECAAAVDGGSAAVADMRNVPPRDGEGAXXXXXXXXXXXXXXXXXXXXGGGFADGAAVCGRCQIERPPGAVHCTQCGVCVQKLDHHCPFMGQCVGRKTLVSFYLFVVCVWTLVVYVLL 888 AGT WGCLI+FGAP+D D +R +IVA+G +AL+ M YL TACTDPGIVF+H A AA H P G + XXXXXXXXXXXXXXXXXXXXXX EEGK G W +D EAQQ+L+ILT+DYR+ + + A VA ++ GLPPE+CAAA D GS AVADMRNVP XXXXXXX GGG D A +CGRCQIERPPGAVHCT CGVCVQKLDHHCPFMGQCVGRKTLV FYLFVV VW L+VYVLL Sbjct: 18 AGTVGWGCLIIFGAPDDGGDMLRTIIVAIGGGLALVTMAFYLSTACTDPGIVFKHTATPVRGTPAAGHGPRGSGGRSALLALSAGAGTPVPTGXXXXXXXXXXXXXXXXXXXXXXAEEGKEAQGAGATWGTEDVEAQQILDILTDDYREGAKSHEVATVAAAEE----------------------GLPPEDCAAAADAGSKAVADMRNVPXXX---------XXXXXXXPRQRGATVGGG--DSATICGRCQIERPPGAVHCTLCGVCVQKLDHHCPFMGQCVGRKTLVPFYLFVVSVWFLIVYVLL 292
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Match: D7G1J4_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J4_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 7.240e-15 Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 694 DGAAVCGRCQIERPPGAVHCTQCGVCVQKLDHHCPFMGQCVGRKTLVSFYLFVVC 858 +G +CGRC ++RP GA+HC +C VCV K DHHCP+ G+C+G K + FYLF+ C Sbjct: 76 EGGVLCGRCDVKRPAGAIHCNECNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGC 130
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Match: A0A6H5KUF9_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF9_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.770e-14 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 1 Query: 694 DGAAVCGRCQIERPPGAVHCTQCGVCVQKLDHHCPFMGQCVGRKTLVSFYLFVVCVW 864 +G +CGRC ++RP GA+HCT C VCV K DHHCP+ G+C+G K + FYLF+ C++ Sbjct: 148 EGGLLCGRCDVKRPAGAIHCTACNVCVTKFDHHCPWTGKCIGEKNIRFFYLFLGCLF 204
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Match: A0A2D4C2P6_PYTIN (Palmitoyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2P6_PYTIN) HSP 1 Score: 80.9 bits (198), Expect = 2.390e-14 Identity = 32/63 (50.79%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 700 AAVCGRCQIERPPGAVHCTQCGVCVQKLDHHCPFMGQCVGRKTLVSFYLFVVCVWTLVVYVLL 888 A +C +CQ+ RP A HC CGVCV+KLDHHCP+ G+C+GR+TL+ FYLF+ W + +++++ Sbjct: 151 AVICAQCQLRRPKDASHCADCGVCVRKLDHHCPWTGKCIGRRTLMLFYLFL---WAITIHLVI 210
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Match: A0A5D6XHI2_9STRA (Palmitoyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHI2_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 9.660e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 685 GFADGAAVCGRCQIERPPGAVHCTQCGVCVQKLDHHCPFMGQCVGRKTLVSFYLFVVCVWTLVVYV 882 G A+ +C +CQI RP A HC+ CGVC+ +LDHHCP+ G+C+G +TL FY+F+ CV VV V Sbjct: 122 GDAELGVICAQCQIRRPYDASHCSDCGVCIAQLDHHCPWTGKCIGGRTLRWFYVFLACVSVHVVLV 187
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Match: M4BNT3_HYAAE (Palmitoyltransferase n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNT3_HYAAE) HSP 1 Score: 75.1 bits (183), Expect = 1.510e-12 Identity = 26/52 (50.00%), Postives = 42/52 (80.77%), Query Frame = 1 Query: 706 VCGRCQIERPPGAVHCTQCGVCVQKLDHHCPFMGQCVGRKTLVSFYLFVVCV 861 VC +C++ RP A HC+ CGVC+++LDHHCP+ G+C+G++T+ FY+F+ C+ Sbjct: 118 VCAQCEVRRPLDASHCSDCGVCIRELDHHCPWTGKCIGKRTIKLFYVFLTCI 169
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Match: A0A6G0X8K6_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8K6_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 7.080e-12 Identity = 28/63 (44.44%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 706 VCGRCQIERPPGAVHCTQCGVCVQKLDHHCPFMGQCVGRKTLVSFYLFVVCVWTLVVYVLLAV 894 +C CQI RP A+HC +CGVC+ +DHHCP+ G+C+G++T++ FYLF+ W + +++ L++ Sbjct: 128 LCAHCQIRRPAEAIHCYECGVCIDGMDHHCPWTGKCIGKQTIMWFYLFL---WMICIHLALSI 187
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Match: A0A1V9Z9R5_9STRA (Palmitoyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9R5_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 9.210e-12 Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 1 Query: 706 VCGRCQIERPPGAVHCTQCGVCVQKLDHHCPFMGQCVGRKTLVSFYLFVVCVWTLVVYVLLAVAYLV 906 +C C+I RPP AVHC +C VC+ LDHHCP+ G+C+G++T+ FYLF+ W + +++ +V+ LV Sbjct: 129 LCAHCRIRRPPNAVHCYECDVCIDGLDHHCPWTGKCIGKRTIWWFYLFL---WMITLHLTFSVSVLV 192
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Match: G4YVS6_PHYSP (Palmitoyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YVS6_PHYSP) HSP 1 Score: 71.6 bits (174), Expect = 9.300e-12 Identity = 27/48 (56.25%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 706 VCGRCQIERPPGAVHCTQCGVCVQKLDHHCPFMGQCVGRKTLVSFYLF 849 VC +C++ RP A HC+ CGVCV+ LDHHCP+ G+CVG++T+ FY+F Sbjct: 69 VCAQCELRRPQNASHCSDCGVCVRGLDHHCPWTGKCVGKRTIKWFYVF 116
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Match: A0A7S2WQ11_9STRA (Palmitoyltransferase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WQ11_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.260e-11 Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 694 DGAAVCGRCQIERPPGAVHCTQCGVCVQKLDHHCPFMGQCVGRKTLVSFYLFV--VCVWTLVV 876 DG C RC I R PG +HC++C +C++ LDHHCP+ G+C+GRK ++ F +F+ VCV+ + V Sbjct: 161 DGLLACTRCNIYRKPGTIHCSECDICIEGLDHHCPWTGKCIGRKNILYFRVFLGMVCVFLIAV 223 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5458.13714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5458.13714.1 >prot_L-elsbetiae_contig5458.13714.1 ID=prot_L-elsbetiae_contig5458.13714.1|Name=mRNA_L-elsbetiae_contig5458.13714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=311bp AGTAAWGCLILFGAPEDDSDTIRLVIVAVGAFIALLAMVSYLFTACTDPGback to top mRNA from alignment at L-elsbetiae_contig5458:4927..11051- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5458.13714.1 ID=mRNA_L-elsbetiae_contig5458.13714.1|Name=mRNA_L-elsbetiae_contig5458.13714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6125bp|location=Sequence derived from alignment at L-elsbetiae_contig5458:4927..11051- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5458:4927..11051- >mRNA_L-elsbetiae_contig5458.13714.1 ID=mRNA_L-elsbetiae_contig5458.13714.1|Name=mRNA_L-elsbetiae_contig5458.13714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1866bp|location=Sequence derived from alignment at L-elsbetiae_contig5458:4927..11051- (Laminarionema elsbetiae ELsaHSoW15)back to top |