mRNA_L-elsbetiae_contig5442.13688.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Match: A0A6H5KTG8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTG8_9PHAE) HSP 1 Score: 708 bits (1828), Expect = 1.110e-251 Identity = 342/405 (84.44%), Postives = 366/405 (90.37%), Query Frame = 2 Query: 2 REAVVLVHQGDK-CTPDFDRLGLQGFDKHPEMYALVSVDVDHADEELLSKLGVNPADASNPQLCPVLSIVPRRSTVEAPAVIAPKADRVGSYHLAAVKTQQVSVGVVNERDFTLDIHYQWWDDPIRPTHIRTLAPGTENWMLSYKTTYIVALNKETQEEVGRYLVKGHGLFTVADRACTAETCGTSEGGETPQDQASRAARKQMDDGRKVNNVQQPASLPRFTEVGFKKMTVPDDVWDLVKTYYEENKNSPKKEKWGQNNVFTNNVEAPSYMVNLPENGPLKKGIFEGLRPVLEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNFYANAFVHYKPKDPEKWSDYI 1213 RE +VLVH+GD+ C PDFD LGL F HP+MY+LVSVD DHAD+ELL KLGV+PA S P+ CP LSIVPRRSTVEAPAVI P D+ GSYHL AVKTQQVSVG+VNE DF LDIHYQWW++P++PTHIRTLAPGTENWMLSYKTT ++ALNKETQEEV RYLVKGHGLFTVA+R+CTAETCGTSEG ETPQD ASR ARKQMD GR VNN +QP LPRFTEVGFKK TVPDDVWDLVKTYYEENK SPKKEKW +NNVFTNNVEAPSYMVNLPENG LK+ IF GLRP+LEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGN+YANAFVHYKPKDPEKWS +I Sbjct: 62 REGMVLVHKGDESCAPDFDTLGLSVFGDHPDMYSLVSVDADHADKELLDKLGVDPATLSEPKKCPSLSIVPRRSTVEAPAVILPTLDKRGSYHLNAVKTQQVSVGIVNEMDFDLDIHYQWWNEPVKPTHIRTLAPGTENWMLSYKTTLVLALNKETQEEVSRYLVKGHGLFTVAERSCTAETCGTSEGTETPQDVASRNARKQMDQGRLVNNRKQPEGLPRFTEVGFKKTTVPDDVWDLVKTYYEENKESPKKEKWSKNNVFTNNVEAPSYMVNLPENGKLKEQIFGGLRPILEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNYYANAFVHYKPKDPEKWSKFI 466
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Match: A0A835YWU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWU1_9STRA) HSP 1 Score: 444 bits (1141), Expect = 1.160e-147 Identity = 218/403 (54.09%), Postives = 281/403 (69.73%), Query Frame = 2 Query: 2 REAVVLVHQGDKCTPDFDRLGLQGFDK-HPEMYALVSVDVDHADEELLSKLGVNPADASNPQLCPVLSIVPRRSTVEAPAVIAPKADRVGSYHLA--AVKTQQVSVGVVNERDFTLDIHYQWWDDPIRPTHIRTLAPGTENWMLSYKTTYIVALNKETQEEVGRYLVKGHGLFTVADRACTAETCGTSEGGETPQDQASRAARKQMDDGRKVNNVQQPASLPRFTEVGFKKMTVPDDVWDLVKTYYEENKNSPKKEKWGQNNVFTNNVEAPSYMVNLPENGPLKKGIFEGLRPVLEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNFYANAFVHYKPKDPEKW 1201 RE ++L+++G KCT DF + GL + + PE ALV+ DV+ D+ L K G+ D + CP ++ +RS ++ P +D + +A +K+Q+V +G VN+ DF + + + W D RP H+R L PG E+WM +Y++T +VA + E+ R V+ HGLFTVA R C E CG E E D+ AR+Q + R NNVQQP LPRFT+VGFKK+ VPDDVWD++ TYY +NK +PK E+WG+ NV+TNN+EAPSYMVNLPE GPLK IF GLRP+LEEWSGVELV T+CYG+R YT SWLANHVDT+ATH +S I+ VDQ+V +DWPL I+DHAGND+NITM PRD+VLYESATCVHGRPSTF G FYAN F+HYKP DP KW Sbjct: 61 REVMMLLYEGGKCTADFKKHGLDEYGRLQPEDVALVAADVNKVDQVFLEKFGI--VDDGDDMPCPTAVVIRQRSPLQNPTFEVVGSDPDDPFAIADGVLKSQEVHIGSVNDYDFPIKVMFVWRDGKERP-HLRRLEPGRESWMKTYRSTELVARALDDGRELQRMRVRWHGLFTVAHRNCNIENCGIVERKEVELDEEEIRAREQNEKFRVRNNVQQPVGLPRFTDVGFKKIRVPDDVWDMLVTYYRQNKQNPKIERWGKGNVYTNNLEAPSYMVNLPETGPLKPAIFNGLRPILEEWSGVELVSTSCYGIRAYTRGSWLANHVDTRATHTISAIINVDQEVNKDWPLNIFDHAGNDHNITMAPRDMVLYESATCVHGRPSTFDGQFYANMFIHYKPTDPSKW 460
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Match: A0A7S2UT49_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT49_9STRA) HSP 1 Score: 240 bits (613), Expect = 8.800e-69 Identity = 109/196 (55.61%), Postives = 143/196 (72.96%), Query Frame = 2 Query: 629 NNVQQPASLPRFTEVGFKKMTVPDDVWDLVKTYYEENKNSPKKEKWGQNNVFTNNVEAPSYMVNLPENGPLKKGIFEGLRPVLEEWSGV-ELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNFYANAFVHYKPKDPEKWSDYI 1213 +N + P+ +P FTEVGF+K+ P DVW++++TYY NK E W +N +TN+ E+P+YM++LPENG +K IF L+P LEEWSGV EL TACYG+RVY + L HVD +THA+SVI+ VDQDVEE W L IYDH+G+ +N+TM P D+VLYESA+C HGRP GN+Y N FVHY+PKDP W+D+ Sbjct: 284 HNKEHPSIVPHFTEVGFEKVRTPPDVWEMIQTYYHANKEHTALEVWDDSNTYTNHFESPTYMIHLPENGRMKPEIFRRLQPYLEEWSGVDELEGTACYGIRVYQEGAELRGHVDRISTHAISVIINVDQDVEEPWYLHIYDHSGSAHNVTMAPGDMVLYESASCQHGRPFPLKGNYYTNTFVHYRPKDPALWADHF 479
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Match: A0A7S2THP0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2THP0_9EUKA) HSP 1 Score: 231 bits (589), Expect = 1.230e-66 Identity = 132/316 (41.77%), Postives = 183/316 (57.91%), Query Frame = 2 Query: 299 QVSVGVVNERDFTLDIHYQWWDDPIRPTHIRTLAPGTENWMLSYKT-TYIVALNKETQEEVGRYLVKGHGLFTVAD--RACTA----ETCGTSEGGETPQDQASRAARKQMDDGRKVNNVQQPASLPRFTEVGFKKMTVPDDVWDLVKTYYEENKNSPKKEKWGQNNVFTNNVEAPSYMVNLPE---NGPLKKGIFEGLRPVLEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNFYANAFVHYKPKDPEKWSDYIK 1216 + +G ++ D LDI W + + +AP ++W+ SY ++ LN + +VG VK F+VA C E C G + Q Q +D R+ N +Q P +L FTE+GF+K +PDDVW+L+++YYE NK+S EKW N + N+ E+ +M+ LPE K+ IFEGLRP LEEWSG EL T YG+RVY N ++L NHVD ATH VS IM + + WPL IYDH GN++NIT+ P ++VLYESATCVHGRPS F G +Y NAF H++PK+ W +++ Sbjct: 29 EAHIGFGSDCDSDLDIF--WVNPQGEEVSVTKVAPQGQSWIGSYLNHKFVYRLNGK---KVGEATVKSKSQFSVAQCGHPCHEHYGEEPCLERLDGRIRRAQLQPVWDSQNEDRRQTNRIQ-PQNLKNFTELGFEKRKIPDDVWELLRSYYENNKDSIVLEKWPSTNPYINHWESVPFMIWLPELHTGDETKRKIFEGLRPHLEEWSGTELEHTDLYGMRVYKNNTFLENHVDRVATHVVSAIMHIADKQDIPWPLNIYDHYGNEHNITISPGEMVLYESATCVHGRPSLFQGEYYVNAFAHFRPKN---WISHLR 335
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Match: A0A7R9UF35_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF35_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.440e-53 Identity = 95/210 (45.24%), Postives = 137/210 (65.24%), Query Frame = 2 Query: 590 RAARKQMDDGRKVNNVQQPASLPRFTEVGFKKMTVPDDVWDLVKTYYEENKNSPKKEKWGQNNVFTNNVEAPSYMVNLPENGP----------LKKGIFEGLRPVLEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNFYANAFVHYKPKD 1189 R + + +DD R NV QP + FT+VGF+KM VP+D+W ++ Y++ + K E+W + N++ N+ E P+YMVNL ++ LKK I++G +P++E+W+G EL T+ YG+RVY N + LA+H D + S I+ VDQDV+E WPL IYDH+G +N+TM P D+VLYES CVHGRP G +YAN FVH++P D Sbjct: 136 RRSCRAVDDQRIKMNVNQPKTQNHFTDVGFRKMRVPEDIWKEIQNYWKWSPKKEKDEEWPKGNIYVNHWEVPTYMVNLEDHSEDPKGSLTGWQLKKRIWDGTKPIIEKWTGKELKSTSLYGIRVYHNGAILASHCD-RLPLVSSAIINVDQDVDEPWPLEIYDHSGKAHNVTMAPGDMVLYESHVCVHGRPFPLKGRYYANLFVHFEPMD 344
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Match: A0A7S1D171_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D171_CYCTE) HSP 1 Score: 179 bits (455), Expect = 6.800e-46 Identity = 86/200 (43.00%), Postives = 132/200 (66.00%), Query Frame = 2 Query: 602 KQMDDGRKVNNVQQPASLPRFTEVGFKKMTVPDDVWDLVKTYYEENKNSPKKEKWGQNNVFTNNVEAPSYMVNLPENG------PLKKGIFEGLRPVLEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNFYANAFVHYKP 1183 KQ + R +++QP S+ +T++GFKK+ P+ V+ L+K ++++NK++ K E+WG N +TNN +P+YMV++ ++ LK+ I++ R +EEW+G EL Q + YG+RVY S LA HVD + S I+ VDQDV+E WP+ +Y H G N+TM+P D+VLYES + +HGRP G FYAN F+H++P Sbjct: 144 KQNERERVAMSLRQPQSMQNYTDIGFKKIKAPEKVFKLIKEFWDKNKDNRKLEQWGTGNTYTNNWASPTYMVSVEDSSLRGGGVVLKQHIWDAARETIEEWTGQELTQCSLYGIRVYEEGSLLATHVD-RLPLVSSAIINVDQDVDEPWPIEVYGHDGKATNVTMEPGDMVLYESHSVLHGRPFPLKGRFYANIFIHFEP 342
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Match: A0A7R9W969_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W969_9STRA) HSP 1 Score: 175 bits (444), Expect = 3.770e-45 Identity = 85/200 (42.50%), Postives = 128/200 (64.00%), Query Frame = 2 Query: 602 KQMDDGRKVNNVQQPASLPRFTEVGFKKMTVPDDVWDLVKTYYEENKNSPKKEKWGQNNVFTNNVEAPSYMVNLPENG------PLKKGIFEGLRPVLEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNFYANAFVHYKP 1183 +Q++ R +++QP S+ +T+ GFKK+ P+++ L++ Y+ ENK K E+W +TN+ EAP+YMV++ + G LK ++ RP +EEW+G+EL T+ YG+RVYT + LA HVD + S I+ V QDV+EDWPL +Y G YN+TMKP D+VLYES + +HGR G +YAN F+H++P Sbjct: 64 EQVEKDRLAMSIRQPQSVMNYTDTGFKKVRAPEELRKLLENYWNENKEKKKVEQWSTGYTYTNHWEAPTYMVSIEDGGLRGGGNSLKHKLWNAARPTIEEWTGMELAPTSLYGIRVYTEGAILAPHVD-RIPLISSAIINVAQDVDEDWPLEVYGRDGMAYNVTMKPGDMVLYESHSLIHGRVFPLKGRYYANIFIHFEP 262
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Match: A0A482SEQ1_9ARCH (Ankyrin repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEQ1_9ARCH) HSP 1 Score: 177 bits (449), Expect = 5.460e-45 Identity = 86/194 (44.33%), Postives = 126/194 (64.95%), Query Frame = 2 Query: 632 NVQQPASLPRFTEVGFKKMTVPDDVWDLVKTYYEENKNSPKKEKWGQNNVFTNNVEAPSYMVNLPENG-----PLKKGIFEGLRPVLEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNFYANAFVHYKPKDPEK 1198 N+ QPA +TEVGFKK+TVP WD + +Y+ N + K EKW + +++ N+ AP M++ ++ LK+ I+ ++P++EEW G + T+ YG+RVY N S LA HVD + S I+QV QD++E WP+ +YDH+G +NITM+P D+VLYES T +HGRP G +YAN FVH++P D E+ Sbjct: 80 NLDQPAKQHNYTEVGFKKITVPKSAWDPLLHFYKNNVQNEKPEKWPKGSIYVNHWVAPPSMISFEDSSLRGGVQLKQLIWNTVKPIIEEWVGRVVEPTSLYGIRVYKNQSILATHVD-RLPLVSSAIIQVAQDIDEPWPIEVYDHSGKAHNITMQPGDMVLYESHTVLHGRPFPMKGRYYANVFVHFQPVDHEQ 272
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Match: A0A7S2PFM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PFM3_9STRA) HSP 1 Score: 174 bits (441), Expect = 8.000e-45 Identity = 87/208 (41.83%), Postives = 131/208 (62.98%), Query Frame = 2 Query: 584 ASRAARKQMDDGRKVNNVQQPASLPRFTEVGFKKMTVPDDVWDLVKTYYEENKNSP--KKEKWGQNNVFTNNVEAPSYMVNLPEN------GPLKKGIFEGLRPVLEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNFYANAFVHYKP 1183 +S +A + +D R +++QPA + +T++GFKK+ P VWD VK ++E NK+ + E W + N +TN+ AP+YMV++ + LK I+ + +EEW+G EL + + YG+RVYT S LA HVD + S I+ VDQDV+E WP+ +Y H G YN+TM+P D++LYES + +HGRP G +YAN FVH++P Sbjct: 149 SSYSACQSTEDDRVEMSLRQPAGMQNYTDIGFKKIKAPPAVWDQVKVFWEANKDRKNWQDENWPKGNTYTNHWVAPTYMVSVEDGRLRGAGSKLKNRIWNAAQSTIEEWTGQELTKCSLYGIRVYTEGSILATHVD-RMPLVSSAIINVDQDVDEPWPIEVYGHDGKAYNVTMEPGDMILYESHSVLHGRPFPLKGRYYANIFVHFEP 355
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Match: B5YN86_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN86_THAPS) HSP 1 Score: 174 bits (440), Expect = 1.440e-44 Identity = 86/198 (43.43%), Postives = 131/198 (66.16%), Query Frame = 2 Query: 611 DDGRKVNNVQQPASLPRFTEVGFKKMTVPDDVWDLVKTYYEENKNSPKKEKWGQNNVFTNNVEAPSYMVNLPENGPLKKG-------IFEGLRPVLEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNFYANAFVHYKP 1183 ++ R +++QPAS+ +T+VGFKK+ P +V++L+ Y++ N ++EKW N + N +AP+YMVN+ EN L+ G I++G++PVLEEW+G+EL Q++ YG+R YT + L+ H D + S I+ V QDVEEDWPL +Y G YN+TM P D+VLYES + +HGRP G ++AN F+H++P Sbjct: 78 EEDRYAMSLRQPASMQNYTDVGFKKVRAPAEVFNLLSNYWDTNLRRRQQEKWPTGNTYVNYWKAPTYMVNV-ENTNLRSGGQLLKQKIWDGVKPVLEEWTGMELEQSSMYGIRQYTRGAILSPHADRMPLIS-SCIINVAQDVEEDWPLEVYGRDGLAYNVTMSPGDMVLYESHSLIHGRPFPLQGEYFANIFIHFRP 273 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5442.13688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5442.13688.1 >prot_L-elsbetiae_contig5442.13688.1 ID=prot_L-elsbetiae_contig5442.13688.1|Name=mRNA_L-elsbetiae_contig5442.13688.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=376bp MYALVSVDVDHADEELLSKLGVNPADASNPQLCPVLSIVPRRSTVEAPAVback to top mRNA from alignment at L-elsbetiae_contig5442:2554..9829+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5442.13688.1 ID=mRNA_L-elsbetiae_contig5442.13688.1|Name=mRNA_L-elsbetiae_contig5442.13688.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7276bp|location=Sequence derived from alignment at L-elsbetiae_contig5442:2554..9829+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5442:2554..9829+ >mRNA_L-elsbetiae_contig5442.13688.1 ID=mRNA_L-elsbetiae_contig5442.13688.1|Name=mRNA_L-elsbetiae_contig5442.13688.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2256bp|location=Sequence derived from alignment at L-elsbetiae_contig5442:2554..9829+ (Laminarionema elsbetiae ELsaHSoW15)back to top |